Pregenerated sensors for KMO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039783Ensembl transcript IDs: ENSMUST00000040250.15, ENSMUST00000097458.4, ENSMUST00000140474.8
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTaGACTCTGATGATGAAGTTAACTTCTGCGTCTGTCCGTGGGACA | + |
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Preference number: 1 (lower is better) Translates to: SASLEKTEAERVSVH*TLMMKLTSASVRGT Trigger: TGTCCCACGGACAGACGCAGAAGTTAACTTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR CCA 90 bp | ACACCAAGCAGTCTTCAAAGCCTCTCCCATCAGAGGGATAGCATCTaGAAAGTTCTTCTGGAAGAAGTCCAGCACATCGCTGCGCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: TPSSLQSLSHQRDSI*KVLLEEVQHIAARW Trigger: CCAACGCGCAGCGATGTGCTGGACTTCTTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGGCTTTGAAGACTGCTTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| 3UTR CCA 90 bp | AATCAGAGGACAGCTTGTGGGAATCCGTTCTCTCCTTCCACTGTGTaGGTGCCAGAGATCGCACCTAAGTCATCAAGTTTGACAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: NQRTACGNPFSPSTV*VPEIAPKSSSLTAS Trigger: GCTTGCTGTCAAACTTGATGACTTAGGTGCGATCTCTGGCACCCACACAGTGGAAGGAGAGAACGGATTCCCACAAGCTGTCCTCTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR GCA 90 bp | GTCCATACCTGGGGGAGAAGAGAATACCCCACATATGCTCCACTTTaGAGGCTTACCTTGAGTTGGAAGTCACTGAGACAAAGCAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: VHTWGRREYPTYAPL*RLTLSWKSLRQSKR Trigger: TCTCTTGCTTTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTCTCTTCTCCCCCAGGTATGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR GCA 90 bp | ACGTGTTGTTGTCCATACCTGGGGGAGAAGAGAATACCCCACATATaGTCCACTTTGCAGGCTTACCTTGAGTTGGAAGTCACTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: TCCCPYLGEKRIPHI*STLQAYLELEVTET Trigger: TGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTCTCTTCTCCCCCAGGTATGGACAACAACACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR GCA 90 bp | TCTAACCCAGGGTCCTATGCAGGTTACATAAGCGCTCTCCCACAGTaGTACATCCCTTACCAGGAAAACAATGATTTTTCTTTCCCTACA | + |
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Preference number: 1 (lower is better) Translates to: SNPGSYAGYISALPQ*YIPYQENNDFSFPT Trigger: TGTAGGGAAAGAAAAATCATTGTTTTCCTGGTAAGGGATGTAGCACTGTGGGAGAGCGCTTATGTAACCTGCATAGGACCCTGGGTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR TCA 90 bp | CTCCTCACCACGCTTAATTCTAGGCTGACAATTAGTTTCCAGCAGTaGACTGAATATGGCAATGGAGACATGCTTTTCACCCTTGAGATG | + |
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Preference number: 1 (lower is better) Translates to: LLTTLNSRLTISFQQ*TEYGNGDMLFTLEM Trigger: CATCTCAAGGGTGAAAAGCATGTCTCCATTGCCATATTCAGTTCACTGCTGGAAACTAATTGTCAGCCTAGAATTAAGCGTGGTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR CCA 90 bp | CCCTCCAACTCCTCCTATGCACCTCCTTGCTTCTTCCAGAAATTATaGCCTCTAAAGACTTTTAATTCTCTTGCAGAGGCAAGTCTATGT | + |
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Preference number: 1 (lower is better) Translates to: PSNSSYAPPCFFQKL*PLKTFNSLAEASLC Trigger: ACATAGACTTGCCTCTGCAAGAGAATTAAAAGTCTTTAGAGGCCATAATTTCTGGAAGAAGCAAGGAGGTGCATAGGAGGAGTTGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR TCA 90 bp | CCCAATGTATTATTTAATTTTCATTGTTTATCAGTAGGCTCCATGTaGGTGAAGAGGACACCTTCCCACGTGTTGTTGTCCATACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PNVLFNFHCLSVGSM*VKRTPSHVLLSIPG Trigger: CCCAGGTATGGACAACAACACGTGGGAAGGTGTCCTCTTCACTCACATGGAGCCTACTGATAAACAATGAAAATTAAATAATACATTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR CCA 90 bp | AGTGAACTGAATATGGCAATGGAGACATGCTTTTCACCCTTGAGATaGAAGAGGAATCAAACATTTGCTACCCAGAACTTTGACACTATG | + |
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Preference number: 1 (lower is better) Translates to: SELNMAMETCFSPLR*KRNQTFATQNFDTM Trigger: CATAGTGTCAAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCATATTCAGTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| 3UTR CAA 90 bp | GGGAGAAGAGAATACCCCACATATGCTCCACTTTGCAGGCTTACCTaGAGTTGGAAGTCACTGAGACAAAGCAAGAGAAGAAAAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GRREYPTYAPLCRLT*SWKSLRQSKRRKAP Trigger: GGGGGCTTTTCTTCTCTTGCTTTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTCTCTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR CAA 90 bp | TGTCCATACCTGGGGGAGAAGAGAATACCCCACATATGCTCCACTTaGCAGGCTTACCTTGAGTTGGAAGTCACTGAGACAAAGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: CPYLGEKRIPHICST*QAYLELEVTETKQE Trigger: CTCTTGCTTTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTCTCTTCTCCCCCAGGTATGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR-3UTR TCA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTAAACATGGGTTCTTTTaGGAAGTGAAAGAGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTKHGFF*EVKEML Trigger: CAACATCTCTTTCACTTCTCAAAAGAACCCATGTTT...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCATCTCCTCTCCTCCCTaGTATAAATTTATTACTACT | + |
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Preference number: 2 (lower is better) Translates to: KGPSQPAWRRQKRRGYLCISSPP*YKFITT Trigger: AGTAGTAATAAATTTATAGCAGGGAGGAGAGGAGAT...GCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR CAA 90 bp | AAAGGTAGAGGGCATGATCGCGTGAAGAAATTTATCCAGGAGCTTTaGGAACAGGAACCACCTAGAGTTGACATGCGCTCGCATCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: KGRGHDRVKKFIQEL*EQEPPRVDMRSHLY Trigger: ATAGAGATGCGAGCGCATGTCAACTCTAGGTGGTTCCTGTTCCAAAAGCTCCTGGATAAATTTCTTCACGCGATCATGCCCTCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGCCAATGCCAACGCAGCACTGCCTCGTGGTATCTTATTCTGGTGAAGGCTTTCCAGCAGTGAACTaGATATGGCAATGGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: FLPMPTQHCLVVSYSGEGFPAVN*IWQWRH Trigger: ATGTCTCCATTGCCATATTCAGTTCACTGCTGGAAA...GCCTTCACCAGAATAAGATACCACGAGGCAGTGCTGCGTTGGCATTGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGATGTTGGTTATTGCATTTTTAAATTGGAAGAGGCCCAGCCCAAGCACGCTTCCCTCGCTCAGCTaGCAAATACACAAACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KEMLVIAFLNWKRPSPSTLPSLS*QIHKLL Trigger: GAGGAGTTTGTGTATTTGTCAGCTGAGCGAGGGAAG...CGTGCTTGGGCTGGGCCTCTTCCAATTTAAAAATGCAATAACCAACATCTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTCCTATGCAGGTTACAGTGTCTCCATGCTTCTaGAAAACACCCTCCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: LFIFAVLVNLTQGPMQVTVSPCF*KTPSYL Trigger: GAGATAGGAGGGTGTTTTCCAGAAGCATGGAGACAC...TGTAACCTGCATAGGACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGTCATCTCTCAGCTCATTTTCTGACCATCTGCCATATGCATATGAAATACCCAGTCAGCCAGCTTaGAGAAGACAGAAGCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TESSLSSFSDHLPYAYEIPSQPA*RRQKRR Trigger: TCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGG...TATTTCATATGCATATGGCAGATGGTCAGAAAATGAGCTGAGAGATGACTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR-3UTR TCA 90 bp | TGTATGTGTATGTGGAAATCAGAGGACAGCTTGTGGGAATCCGTTCTCTCCTTCTCTCAGCTCATTTTCTaGCCATCTGCCATATGCATA | + |
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Preference number: 2 (lower is better) Translates to: CMCMWKSEDSLWESVLSFSQLIF*PSAICI Trigger: TATGCATATGGCAGATGGTCAGAAAATGAGCTGAGA...GAAGGAGAGAACGGATTCCCACAAGCTGTCCTCTGATTTCCACATACACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR CAA 90 bp | TCCAGCAGTGAACTGAATATGGCAATGGAGACATGCTTTTCACCCTaGAGATGGAAGAGGAATCAAACATTTGCTACCCAGAACTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: SSSELNMAMETCFSP*RWKRNQTFATQNFD Trigger: GTCAAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCATATTCAGTTCACTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| 3UTR CAA 90 bp | GACTGGGAAATAAAACAGATATATCCTGGAACTCTTCAGAACACCTaGTCTCTCATTCTCAGCTCTACCATAGCAAGTGGCTATGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DWEIKQIYPGTLQNT*SLILSSTIASGYEP Trigger: AGGCTCATAGCCACTTGCTATGGTAGAGCTGAGAATGAGAGACAAGGTGTTCTGAAGAGTTCCAGGATATATCTGTTTTATTTCCCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR GCA 90 bp | TCAAAATTGACAATGAAAAGAACTTCTAAGGGTCCCAGTCAGCCAGCTTGGAGAATGGCAATGGAGACATaGTTTTCACCCTTGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: SKLTMKRTSKGPSQPAWRMAMET*FSPLRW Trigger: CCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCAT...TCTCCAAGCTGGCTGACTGGGACCCTTAGAAGTTCTTTTCATTGTCAATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | GTAACTCCATGGAACTTGCAGAGAAATGTCTGTACTCCTAGTCCAGTAGCCAGTAGGTCTGAAATTGCATaGTCATCTGGGATCCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: VTPWNLQRNVCTPSPVASRSEIA*SSGILN Trigger: ATTTAGGATCCCAGATGACCATGCAATTTCAGACCT...ACTGGCTACTGGACTAGGAGTACAGACATTTCTCTGCAAGTTCCATGGAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAAATTGACAATGAAAAGAACTTCTAAGGGTCCCAGTCAGCCAGCTTGGAGATTTCCAGCAGTGAACTaGATATGGCAATGGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: SKLTMKRTSKGPSQPAWRFPAVN*IWQWRH Trigger: ATGTCTCCATTGCCATATTCAGTTCACTGCTGGAAA...TCTCCAAGCTGGCTGACTGGGACCCTTAGAAGTTCTTTTCATTGTCAATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTGCTATAAATTTATTACTACTAACAACCCTTTCTCATCCTTCACTTAGACATAGCAAGTGGCTATaGGCCTGCAAGCCCCATCTA | + |
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Preference number: 2 (lower is better) Translates to: LPAINLLLLTTLSHPSLRHSKWL*ACKPHL Trigger: TAGATGGGGCTTGCAGGCTCATAGCCACTTGCTATG...TCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAATAAATTTATAGCAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | AGACTTTTAATTCTCTTGCAGAGGCAAGTCTATGTGGTTATGTGCCCAGGGGTGCTGAGATCTGGAGACTaGGAAATAAAACAGATATAT | + |
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Preference number: 2 (lower is better) Translates to: RLLILLQRQVYVVMCPGVLRSGD*EIKQIY Trigger: ATATATCTGTTTTATTTCCCAGTCTCCAGATCTCAG...CACCCCTGGGCACATAACCACATAGACTTGCCTCTGCAAGAGAATTAAAAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAACAATGTTTCTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTTTTCCAGCAGTGAACTaGATATGGCAATGGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: KGTMFLFIFAVLVNLTQGFPAVN*IWQWRH Trigger: ATGTCTCCATTGCCATATTCAGTTCACTGCTGGAAA...ACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAGAAACATTGTTCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAACAATGTTTCTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTACCCAAGGATGTCTTTaGCATTATGGGAAATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KGTMFLFIFAVLVNLTQGTQGCL*HYGKCQ Trigger: TTGGCATTTCCCATAATGTCAAAGACATCCTTGGGT...ACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAGAAACATTGTTCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTCCTATGCAGGTTACAATCTCCTCTCCTCCCTaGTATAAATTTATTACTACT | + |
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Preference number: 2 (lower is better) Translates to: LFIFAVLVNLTQGPMQVTISSPP*YKFITT Trigger: AGTAGTAATAAATTTATAGCAGGGAGGAGAGGAGAT...TGTAACCTGCATAGGACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAACAATGTTTCTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTATTGCATTTTTAAATTaGAAGAGGCCCAGCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: KGTMFLFIFAVLVNLTQGIAFLN*KRPSPS Trigger: GCTTGGGCTGGGCCTCTTCCAATTTAAAAATGCAAT...ACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAGAAACATTGTTCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTGCTATAAATTTATTACTACTAACAACCCTTTCTCATCCTTCACTTAGAATGGCAATGGAGACATaGTTTTCACCCTTGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: LPAINLLLLTTLSHPSLRMAMET*FSPLRW Trigger: CCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCAT...TCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAATAAATTTATAGCAGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAACAATGTTTCTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTCTGAGATCTGGAGACTaGGAAATAAAACAGATATAT | + |
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Preference number: 2 (lower is better) Translates to: KGTMFLFIFAVLVNLTQGLRSGD*EIKQIY Trigger: ATATATCTGTTTTATTTCCCAGTCTCCAGATCTCAG...ACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAGAAACATTGTTCCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTGCTATAAATTTATTACTACTAACAACCCTTTCTCATCCTTCACTTAGAGGTTCTTTTGAGAAGTaGAAGAGATGTTGGTTATTG | + |
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Preference number: 2 (lower is better) Translates to: LPAINLLLLTTLSHPSLRGSFEK*KRCWLL Trigger: CAATAACCAACATCTCTTTCACTTCTCAAAAGAACC...TCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAATAAATTTATAGCAGGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CCA 90 bp | TTACTACTAACAACCCTTTCTCATCCTTCACTTAGAATGCCATTGATAGCTCTTTTTTCACCCTTGAGATaGAAGAGGAATCAAACATTT | + |
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Preference number: 2 (lower is better) Translates to: LLLTTLSHPSLRMPLIALFSPLR*KRNQTF Trigger: AAATGTTTGATTCCTCTTCCATCTCAAGGGTGAAAA...AAGAGCTATCAATGGCATTCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR GCA 72 bp | TTAATTCTCTTGCAGAGGCAAGTCTATGTGGTTATGTaGCCAGGGGTGCAGGAGCCCAAGGAAGCCGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LILLQRQVYVVM*PGVQEPKEAGG Trigger: CCCTCCGGCTTCCTTGGGCTCCTGCACCCCTGGGCACATAACCACATAGACTTGCCTCTGCAAGAGAATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR CCA 72 bp | GGGACAGATGGTGCACAAGTAGGTAGGTGCCTCCAATaGCTATCAGGGACCCAAGGACAAAGAGTCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GTDGAQVGRCLQ*LSGTQGQRVLC Trigger: ACAGAGGACTCTTTGTCCTTGGGTCCCTGATAGCCATTGGAGGCACCTACCTACTTGTGCACCATCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAGCCAGTGGTTCCCATCCAGGCAGGTCTTCTCAAGAACTCCAGAGGTCTCAAGGAACCACCTAGAGTaGACATGCGCTCGCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: SSQWFPSRQVFSRTPEVSRNHLE*TCARIS Trigger: AGAGATGCGAGCGCATGTCAACTCTAGGTGGTTCCT...TGAGACCTCTGGAGTTCTTGAGAAGACCTGCCTGGATGGGAACCACTGGCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| 3UTR TCA 72 bp | GGCAATTGTGAGCTGCCTGAAATGGGTGCTGGGAGCTaGACTAGGAGCCTCTTCAAGAGCAGCACACATACT | + |
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Preference number: 3 (lower is better) Translates to: GNCELPEMGAGS*TRSLFKSSTHT Trigger: AGTATGTGTGCTGCTCTTGAAGAGGCTCCTAGTTCAGCTCCCAGCACCCATTTCAGGCAGCTCACAATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR CCA 72 bp | ACAGCTTGTGGGAATCCGTTCTCTCCTTCCACTGTGTaGGTGCCAGAGATCGCACCTAAGTCATCAAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: TACGNPFSPSTV*VPEIAPKSSSL Trigger: CAAACTTGATGACTTAGGTGCGATCTCTGGCACCCACACAGTGGAAGGAGAGAACGGATTCCCACAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR CCA 72 bp | CCCAGCAACCACATGATGGCTCACAACCATCAGCAATaGGATTTTATGGCCTCTTCTGGTGTGTCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PSNHMMAHNHQQ*DFMASSGVSED Trigger: GTCTTCAGACACACCAGAAGAGGCCATAAAATCCCATTGCTGATGGTTGTGAGCCATCATGTGGTTGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATTTGCTACCCAGAACTTaGACACTATGGTTGGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: QLGEDRSGEGICALHSDDLLPRT*TLWLVN Trigger: GTTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAA...ATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTTCACTTAGAATGCCATaGATAGCTCTTTCCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTSLRMP*IALSFF Trigger: AAAGAAGGAAAGAGCTATCAATGGCATTCTAAGTGA...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR GCA 72 bp | TGGGGGAGAAGAGAATACCCCACATATGCTCCACTTTaGAGGCTTACCTTGAGTTGGAAGTCACTGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: WGRREYPTYAPL*RLTLSWKSLRQ Trigger: TTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTCTCTTCTCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAAACATGCTTTTCACCCTaGAGATGGAAGAGGAATCAA | + |
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Preference number: 3 (lower is better) Translates to: LGEDRSGEGICALHSDDETCFSP*RWKRNQ Trigger: TTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGT...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| 3UTR CCA 72 bp | TGGGACAGTCAAGGAACCACTTCTGTACGTCTGAAGTaGACTAAACTGTGTCTCCATGCTTCTGGAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: WDSQGTTSVRLK*TKLCLHASGKH Trigger: GTGTTTTCCAGAAGCATGGAGACACAGTTTAGTCCACTTCAGACGTACAGAAGTGGTTCCTTGACTGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| 3UTR CCA 72 bp | CCCACATATGCTCCACTTTGCAGGCTTACCTTGAGTTaGAAGTCACTGAGACAAAGCAAGAGAAGAAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PTYAPLCRLTLS*KSLRQSKRRKA Trigger: GGCTTTTCTTCTCTTGCTTTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTGTATGTGGAAATCAGAGGACAGCTTGTGGGAATCCGTTCTCTCCTTCTTGCTACCCAGAACTTaGACACTATGGTTGGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CMCMWKSEDSLWESVLSFLLPRT*TLWLVN Trigger: GTTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAA...GAAGGAGAGAACGGATTCCCACAAGCTGTCCTCTGATTTCCACATACACATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR GCA 72 bp | GGGTCCTATGCAGGTTACATAAGCGCTCTCCCACAGTaGTACATCCCTTACCAGGAAAACAATGATTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSYAGYISALPQ*YIPYQENNDFS Trigger: AGAAAAATCATTGTTTTCCTGGTAAGGGATGTAGCACTGTGGGAGAGCGCTTATGTAACCTGCATAGGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTTTAATTCTCTTGCAGAGGCAAGTCTATGTGGTTATGTGCCCAGGGGTGTATTGCATTTTTAAATaGGAAGAGGCCCAGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLLILLQRQVYVVMCPGVYCIFK*EEAQPK Trigger: CTTGGGCTGGGCCTCTTCCAATTTAAAAATGCAATA...CACCCCTGGGCACATAACCACATAGACTTGCCTCTGCAAGAGAATTAAAAGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR GCA 72 bp | TCCTTTTTCCCCTCCAACTCCTCCTATGCACCTCCTTaGTTCTTCCAGAAATTATGGCCTCTAAAGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SFFPSNSSYAPP*FFQKLWPLKTF Trigger: AAAAGTCTTTAGAGGCCATAATTTCTGGAAGAAGCAAGGAGGTGCATAGGAGGAGTTGGAGGGGAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR CCA 72 bp | CCTCCTAAGGATGCTAGCCCAGGGATTTCAATCCTTTaGCATGTGTCTAAAACTTTACTTCCTGCTGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PPKDASPGISIL*HVSKTLLPAED Trigger: ATCTTCAGCAGGAAGTAAAGTTTTAGACACATGCCAAAGGATTGAAATCCCTGGGCTAGCATCCTTAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCCCTCGCTCAGCTGACAAATACACAAACTCCTCACCACGCTTAATTCTAACATGCTTTTCACCCTaGAGATGGAAGAGGAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: FFPRSADKYTNSSPRLILTCFSP*RWKRNQ Trigger: TTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGT...TAGAATTAAGCGTGGTGAGGAGTTTGTGTATTTGTCAGCTGAGCGAGGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| 3UTR GCA 72 bp | GTTTCCAGCAGTGAACTGAATATGGCAATGGAGACATaGTTTTCACCCTTGAGATGGAAGAGGAATCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VSSSELNMAMET*FSPLRWKRNQT Trigger: TGTTTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCATATTCAGTTCACTGCTGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| 3UTR TCA 72 bp | ACGCTTAATTCTAGGCTGACAATTAGTTTCCAGCAGTaGACTGAATATGGCAATGGAGACATGCTTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: TLNSRLTISFQQ*TEYGNGDMLFT Trigger: GGTGAAAAGCATGTCTCCATTGCCATATTCAGTTCACTGCTGGAAACTAATTGTCAGCCTAGAATTAAGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGTACATAGATAGGTCTGAAATTGCATGGTCATCTGGGATCCTAAATCTTGAGTTGCTACCCAGAACTTaGACACTATGGTTGGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LYIDRSEIAWSSGILNLELLPRT*TLWLVN Trigger: GTTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAA...CTCAAGATTTAGGATCCCAGATGACCATGCAATTTCAGACCTATCTATGTACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| 3UTR CCA 72 bp | AATATGGCAATGGAGACATGCTTTTCACCCTTGAGATaGAAGAGGAATCAAACATTTGCTACCCAGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: NMAMETCFSPLR*KRNQTFATQNF Trigger: AAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGGGGTGCAGGAGCCCAAGGAAGCCGGAGGGGTTGGATCTCCTGAGCTAGATCTTCCAGACCAATaGCTTTCAAGGCCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPGVQEPKEAGGVGSPELDLPDQ*LSRPAV Trigger: GACGGCAGGCCTTGAAAGCCATTGGTCTGGAAGATC...TAGCTCAGGAGATCCAACCCCTCCGGCTTCCTTGGGCTCCTGCACCCCTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | AAGGGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCGGGAGAGCACTTCACTaGTATCATGGGCTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGPSQPAWRRQKRRGYLCGRALH*YHGLGR Trigger: CCTGCCCAGCCCATGATATCAGTGAAGTGCTCTCCC...GCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGATCTTCCAGACCAATaGCTTTCAAGGCCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTDLPDQ*LSRPAV Trigger: GACGGCAGGCCTTGAAAGCCATTGGTCTGGAAGATC...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGCCAGTGGTTCCCATCCAGGCAGGTCTTCTCAAGAACTCCAGAGGTCTCAGCAGGGGAGAAAGGCTaGCTTGTAGACGCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSQWFPSRQVFSRTPEVSAGEKG*LVDAPM Trigger: CATTGGAGCGTCTACAAGTCAGCCTTTCTCCCCTGC...TGAGACCTCTGGAGTTCTTGAGAAGACCTGCCTGGATGGGAACCACTGGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTTCACTGATATCATaGGCTGGGCAGGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGPSQPAWRRQKRRGYLCTSLIS*AGQATE Trigger: TTCTGTTGCCTGCCCAGCCCATGATATCAGTGAAGT...GCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTACTTCACTGATATCATaGGCTGGGCAGGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTTSLIS*AGQATE Trigger: TTCTGTTGCCTGCCCAGCCCATGATATCAGTGAAGT...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | AGCCTCTCCCATCAGAGGGATAGCATCTGGAAAGTTCTTCTGGAAGAAGTCCAGGTGGGCTCTGACAGTTaGATAGGCTCCATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSHQRDSIWKVLLEEVQVGSDS*IGSITP Trigger: GGGTGTGATGGAGCCTATTCAACTGTCAGAGCCCAC...CTGGACTTCTTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGTTCCCATAGGGAATTaGAGACTTCTTTCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTVPIGN*RLLSRK Trigger: CTTTCGGGAAAGAAGTCTGCAATTCCCTATGGGAAC...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGATATCATGGGCTaGGCAGGCAACAGAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGPSQPAWRRQKRRGYLCTDIMG*AGNRKK Trigger: TTTCTTTCTGTTGCCTGCCCAGCCCATGATATCAGT...GCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCTTTCCCGAAAGAGAGTaGATCATTCTGGCTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KGPSQPAWRRQKRRGYLCFPERE*IILAFM Trigger: CATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAA...GCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | AGCCTCTCCCATCAGAGGGATAGCATCTGGAAAGTTCTTCTGGAAGAAGTCCAGTGCTCCAACCTTAGTTaGCAGGGGAGAAAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSHQRDSIWKVLLEEVQCSNLS*QGRKAD Trigger: GTCAGCCTTTCTCCCCTGCCAACTAAGGTTGGAGCA...CTGGACTTCTTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGTGGTTAAGACCACTGACTGCTCTTCCAGAGGTCCTAAGTTCAATTCCCAACAAGGTCACATGTaGCATCTCGGGGAACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVVKTTDCSSRGPKFNSQQGHM*HLGEPC Trigger: ACAAGGTTCCCCGAGATGTCACATGTGACCTTGTTG...GGAATTGAACTTAGGACCTCTGGAAGAGCAGTCAGTGGTCTTAACCACTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | CAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAAAGAAATCTCTCATaGGGGCTTGCTCTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QLGEDRSGEGICALHSDDERNLS*GLALPS Trigger: TGATGGGAGAGCAAGCCCTCATGAGAGATTTCTTTC...ATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCCTCGCTCAGCTGACAAATACACAAACTCCTCACCACGCTTAATTCTAGGGAGAGCACTTCACTaGTATCATGGGCTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFPRSADKYTNSSPRLILGRALH*YHGLGR Trigger: CCTGCCCAGCCCATGATATCAGTGAAGTGCTCTCCC...TAGAATTAAGCGTGGTGAGGAGTTTGTGTATTTGTCAGCTGAGCGAGGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATATGCCAACGCAGCACTaGCTCGTGGTATCTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGEDRSGEGICALHSDDMPTQH*LVVSYS Trigger: AGAATAAGATACCACGAGGCAGTGCTGCGTTGGCAT...ATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTTCTGGGCAATTGTGAGCTGCCTGAAATGGGTGCTGGGAGCTGAACTAGAGAGTGGATCATTCTaGCTTTCATGGGCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKFWAIVSCLKWVLGAELESGSF*LSWAHL Trigger: AAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTC...TAGTTCAGCTCCCAGCACCCATTTCAGGCAGCTCACAATTGCCCAGAACTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR CAA 72 bp | CTGGGGGAGAAGAGAATACCCCACATATGCTCCACTTaGCAGGCTTACCTTGAGTTGGAAGTCACTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGEKRIPHICST*QAYLELEVTET Trigger: TGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTCTCTTCTCCCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| 3UTR CAA 72 bp | GGGCATGATCGCGTGAAGAAATTTATCCAGGAGCTTTaGGAACAGGAACCACCTAGAGTTGACATGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GHDRVKKFIQEL*EQEPPRVDMRS Trigger: CGAGCGCATGTCAACTCTAGGTGGTTCCTGTTCCAAAAGCTCCTGGATAAATTTCTTCACGCGATCATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCCTCGCTCAGCTGACAAATACACAAACTCCTCACCACGCTTAATTCTAGTGGGCTCTGACAGTTaGATAGGCTCCATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: FFPRSADKYTNSSPRLILVGSDS*IGSITP Trigger: GGGTGTGATGGAGCCTATTCAACTGTCAGAGCCCAC...TAGAATTAAGCGTGGTGAGGAGTTTGTGTATTTGTCAGCTGAGCGAGGGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAAATGCCAACGCAGCACTaGCTCGTGGTATCTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEDRSGEGICALHSDDEMPTQH*LVVSYS Trigger: AGAATAAGATACCACGAGGCAGTGCTGCGTTGGCAT...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGGGCATGATCGCGTGAAGAAATTTATCCAGGAGCTTTTGGAACAGGAATGTCTGTCTCCAGCCTaGGCCGTCCATGTTAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GRGHDRVKKFIQELLEQECLSPA*AVHVST Trigger: AGTACTAACATGGACGGCGCAGGCTGGAGACAGACA...TTCCTGTTCCAAAAGCTCCTGGATAAATTTCTTCACGCGATCATGCCCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAATTGACAATGAAAAGAACTTCTAAGGGTCCCAGTCAGCCAGCTTGGAGAGTGGGCTCTGACAGTTaGATAGGCTCCATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SKLTMKRTSKGPSQPAWRVGSDS*IGSITP Trigger: GGGTGTGATGGAGCCTATTCAACTGTCAGAGCCCAC...TCTCCAAGCTGGCTGACTGGGACCCTTAGAAGTTCTTTTCATTGTCAATTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | GGCTCAGTGGTTAAGACCACTGACTGCTCTTCCAGAGGTCCTAAGTTCAATTCCGTTCCCATAGGGAATTaGAGACTTCTTTCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVVKTTDCSSRGPKFNSVPIGN*RLLSRK Trigger: CTTTCGGGAAAGAAGTCTGCAATTCCCTATGGGAAC...GGAATTGAACTTAGGACCTCTGGAAGAGCAGTCAGTGGTCTTAACCACTGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | CATGATCGCGTGAAGAAATTTATCCAGGAGCTTTTGGAACAGGAACCACCTAGAGATCTTCCAGACCAATaGCTTTCAAGGCCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HDRVKKFIQELLEQEPPRDLPDQ*LSRPAV Trigger: GACGGCAGGCCTTGAAAGCCATTGGTCTGGAAGATC...TCTAGGTGGTTCCTGTTCCAAAAGCTCCTGGATAAATTTCTTCACGCGATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTTCTGGGCAATTGTGAGCTGCCTGAAATGGGTGCTGGGAGCTGAACTATTTCCCGAAAGAGAGTaGATCATTCTGGCTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AKFWAIVSCLKWVLGAELFPERE*IILAFM Trigger: CATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAA...TAGTTCAGCTCCCAGCACCCATTTCAGGCAGCTCACAATTGCCCAGAACTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATCTCCCCATTCTTAGGTaGAATTGTCAACTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QLGEDRSGEGICALHSDDLPILR*NCQLHV Trigger: TACATGGAGTTGACAATTCCACCTAAGAATGGGGAG...ATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | AGACTTTTAATTCTCTTGCAGAGGCAAGTCTATGTGGTTATGTGCCCAGGGGTGCGCAGCACTGCCTCGTaGTATCTTATTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLILLQRQVYVVMCPGVRSTAS*YLILVK Trigger: CTTCACCAGAATAAGATACCACGAGGCAGTGCTGCG...CACCCCTGGGCACATAACCACATAGACTTGCCTCTGCAAGAGAATTAAAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | AGACTTTTAATTCTCTTGCAGAGGCAAGTCTATGTGGTTATGTGCCCAGGGGTGGAAAGAAATCTCTCATaGGGGCTTGCTCTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLILLQRQVYVVMCPGVERNLS*GLALPS Trigger: TGATGGGAGAGCAAGCCCTCATGAGAGATTTCTTTC...CACCCCTGGGCACATAACCACATAGACTTGCCTCTGCAAGAGAATTAAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | TCAAAATTGACAATGAAAAGAACTTCTAAGGGTCCCAGTCAGCCAGCTTGGAGACATCAGCACACAGTGTaGCTTCAGGTGGAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKLTMKRTSKGPSQPAWRHQHTV*LQVEGR Trigger: TCTCCCTTCCACCTGAAGTCACACTGTGTGCTGATG...TCTCCAAGCTGGCTGACTGGGACCCTTAGAAGTTCTTTTCATTGTCAATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAATGGGATCCTAAATCTTaGGAATTCAGGAAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGEDRSGEGICALHSDDEWDPKS*EFRKAH Trigger: ATGTGCCTTCCTGAATTCTCAAGATTTAGGATCCCA...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | GTAACTCCATGGAACTTGCAGAGAAATGTCTGTACTCCTAGTCCAGTAGCCAGTAAAGCAGGCATTCAGTaGTCCAACCTTAGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTPWNLQRNVCTPSPVASKAGIQ*SNLSWQ Trigger: CTGCCAACTAAGGTTGGAGCACTGAATGCCTGCTTT...ACTGGCTACTGGACTAGGAGTACAGACATTTCTCTGCAAGTTCCATGGAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTCCATGGAACTTGCAGAGAAATGTCTGTACTCCTAGTCCAGTAGCCAGTATGTCTGATAAGAGGTaGTTGTCTGTCTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTPWNLQRNVCTPSPVASMSDKR*LSVSSL Trigger: CAGGCTGGAGACAGACAACCACCTCTTATCAGACAT...ACTGGCTACTGGACTAGGAGTACAGACATTTCTCTGCAAGTTCCATGGAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| 3UTR CAA 72 bp | CCCCACATATGCTCCACTTTGCAGGCTTACCTTGAGTaGGAAGTCACTGAGACAAAGCAAGAGAAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHICSTLQAYLE*EVTETKQEKKS Trigger: GCTTTTCTTCTCTTGCTTTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | ACGCAGCACTGCCTCGTGGTATCTTATTCTGGTGAAGGCGACCATGGTATAGAGTCGTACACATCAACTTaGAAATTCCTCTTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQHCLVVSYSGEGDHGIESYTST*KFLFAR Trigger: TCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGA...CTCTATACCATGGTCGCCTTCACCAGAATAAGATACCACGAGGCAGTGCTGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGACCACTGACTGCTCTTCCAGAGGTCCTAAGTTCAATTCCCAGCAACCACTGGGATCCTAAATCTTaGGAATTCAGGAAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LRPLTALPEVLSSIPSNHWDPKS*EFRKAH Trigger: ATGTGCCTTCCTGAATTCTCAAGATTTAGGATCCCA...GTGGTTGCTGGGAATTGAACTTAGGACCTCTGGAAGAGCAGTCAGTGGTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | TGGAAGAGGAATCAAACATTTGCTACCCAGAACTTTGACACTATGGTTGGTGAAAAAGCAGGCATTCAGTaGTCCAACCAAACCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: WKRNQTFATQNFDTMVGEKAGIQ*SNQTTA Trigger: GGCGGTGGTTTGGTTGGAGCACTGAATGCCTGCTTT...TTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | GTAACTCCATGGAACTTGCAGAGAAATGTCTGTACTCCTAGTCCAGTAGCCAGTGTTCCCATAGGGAATTaGAGACTTCTTTCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTPWNLQRNVCTPSPVASVPIGN*RLLSRK Trigger: CTTTCGGGAAAGAAGTCTGCAATTCCCTATGGGAAC...ACTGGCTACTGGACTAGGAGTACAGACATTTCTCTGCAAGTTCCATGGAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCCTCGCTCAGCTGACAAATACACAAACTCCTCACCACGCTTAATTCTAGAGAGTGGATCATTCTaGCTTTCATGGGCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFPRSADKYTNSSPRLILESGSF*LSWAHL Trigger: AAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTC...TAGAATTAAGCGTGGTGAGGAGTTTGTGTATTTGTCAGCTGAGCGAGGGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| 3UTR CAA 72 bp | GAATACCCCACATATGCTCCACTTTGCAGGCTTACCTaGAGTTGGAAGTCACTGAGACAAAGCAAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EYPTYAPLCRLT*SWKSLRQSKRR Trigger: TCTTCTCTTGCTTTGTCTCAGTGACTTCCAACTCAAGGTAAGCCTGCAAAGTGGAGCATATGTGGGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | ACTGAGTCATCTCTCAGCTCATTTTCTGACCATCTGCCATATGCATATGAAATACATCAGCACACAGTGTaGCTTCAGGTGGAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TESSLSSFSDHLPYAYEIHQHTV*LQVEGR Trigger: TCTCCCTTCCACCTGAAGTCACACTGTGTGCTGATG...TATTTCATATGCATATGGCAGATGGTCAGAAAATGAGCTGAGAGATGACTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | TTAAGACCACTGACTGCTCTTCCAGAGGTCCTAAGTTCAATTCCCAGCAACCACAGGTCTGAAATTGCATaGTCATCTGGGATCCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRPLTALPEVLSSIPSNHRSEIA*SSGILN Trigger: ATTTAGGATCCCAGATGACCATGCAATTTCAGACCT...GTGGTTGCTGGGAATTGAACTTAGGACCTCTGGAAGAGCAGTCAGTGGTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | CTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTCCTATGCAGGTTACATTATCCAGGAGCTTTTaGAACAGGAACCACCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFAVLVNLTQGPMQVTLSRSF*NRNHLE Trigger: CTCTAGGTGGTTCCTGTTCCAAAAGCTCCTGGATAA...TGTAACCTGCATAGGACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040250.15 |
||
| CDS-3UTR CCA 90 bp | TGGAAGAGGAATCAAACATTTGCTACCCAGAACTTTGACACTATGGTTGGTGAACGCAGCACTGCCTCGTaGTATCTTATTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKRNQTFATQNFDTMVGERSTAS*YLILVK Trigger: CTTCACCAGAATAAGATACCACGAGGCAGTGCTGCG...TTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| 3UTR CAA 72 bp | TTCCTTTTTCCCCTCCAACTCCTCCTATGCACCTCCTaGCTTCTTCCAGAAATTATGGCCTCTAAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFPLQLLLCTS*LLPEIMASKDF Trigger: AAAGTCTTTAGAGGCCATAATTTCTGGAAGAAGCAAGGAGGTGCATAGGAGGAGTTGGAGGGGAAAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | GGTATAGAGAGGGATAAAGGTAGAGGGCATGATCGCGTGAAGAAATTTATCCAGTTTCCCGAAAGAGAGTaGATCATTCTGGCTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GIERDKGRGHDRVKKFIQFPERE*IILAFM Trigger: CATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAA...CTGGATAAATTTCTTCACGCGATCATGCCCTCTACCTTTATCCCTCTCTATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | CATGATCGCGTGAAGAAATTTATCCAGGAGCTTTTGGAACAGGAACCACCTAGACTCCCCATTCTTAGGTaGAATTGTCAACTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: HDRVKKFIQELLEQEPPRLPILR*NCQLHV Trigger: TACATGGAGTTGACAATTCCACCTAAGAATGGGGAG...TCTAGGTGGTTCCTGTTCCAAAAGCTCCTGGATAAATTTCTTCACGCGATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| 3UTR CAA 72 bp | GAACTGAATATGGCAATGGAGACATGCTTTTCACCCTaGAGATGGAAGAGGAATCAAACATTTGCTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELNMAMETCFSP*RWKRNQTFATQ Trigger: CTGGGTAGCAAATGTTTGATTCCTCTTCCATCTCAAGGGTGAAAAGCATGTCTCCATTGCCATATTCAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| 3UTR CAA 72 bp | ATCAAACATTTGCTACCCAGAACTTTGACACTATGGTaGGTGAACGGGGGAATTTGTCCTAGTAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IKHLLPRTLTLW*VNGGICPSNSM Trigger: CATGGAGTTACTAGGACAAATTCCCCCGTTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAAATGTTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR TCA 90 bp | TTACTACTAACAACCCTTTCTCATCCTTCACTTAGAATGCCATTGATAGCTCTTCAACAAGGTCACATGTaGCATCTCGGGGAACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTTLSHPSLRMPLIALQQGHM*HLGEPC Trigger: ACAAGGTTCCCCGAGATGTCACATGTGACCTTGTTG...AAGAGCTATCAATGGCATTCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGCTATAAATTTATTACTACTAACAACCCTTTCTCATCCTTCACTTAGAAAAGCAGGCATTCAGTaGTCCAACCAAACCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAINLLLLTTLSHPSLRKAGIQ*SNQTTA Trigger: GGCGGTGGTTTGGTTGGAGCACTGAATGCCTGCTTT...TCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAATAAATTTATAGCAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATGTTGGTTATTGCATTTTTAAATTGGAAGAGGCCCAGCCCAAGCACGCTCCCCATTCTTAGGTaGAATTGTCAACTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KEMLVIAFLNWKRPSPSTLPILR*NCQLHV Trigger: TACATGGAGTTGACAATTCCACCTAAGAATGGGGAG...CGTGCTTGGGCTGGGCCTCTTCCAATTTAAAAATGCAATAACCAACATCTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CCA 90 bp | TCAAAATTGACAATGAAAAGAACTTCTAAGGGTCCCAGTCAGCCAGCTTGGAGAAGGTCTGAAATTGCATaGTCATCTGGGATCCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLTMKRTSKGPSQPAWRRSEIA*SSGILN Trigger: ATTTAGGATCCCAGATGACCATGCAATTTCAGACCT...TCTCCAAGCTGGCTGACTGGGACCCTTAGAAGTTCTTTTCATTGTCAATTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGGAATCAAACATTTGCTACCCAGAACTTTGACACTATGGTTGGTGAACTCGTACACATCAACTTaGAAATTCCTCTTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGIKHLLPRTLTLWLVNSYTST*KFLFAR Trigger: TCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGA...GTTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGCTATAAATTTATTACTACTAACAACCCTTTCTCATCCTTCACTTAGAACTGATATCATGGGCTaGGCAGGCAACAGAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPAINLLLLTTLSHPSLRTDIMG*AGNRKK Trigger: TTTCTTTCTGTTGCCTGCCCAGCCCATGATATCAGT...TCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAATAAATTTATAGCAGGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR TCA 90 bp | TTACTACTAACAACCCTTTCTCATCCTTCACTTAGAATGCCATTGATAGCTCTTTCGTACACATCAACTTaGAAATTCCTCTTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTTLSHPSLRMPLIALSYTST*KFLFAR Trigger: TCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGA...AAGAGCTATCAATGGCATTCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGGGGTGCAGGAGCCCAAGGAAGCCGGAGGGGTTGGATCTCCTGAGCTAGTGCATGTGAAAGATTaGTCCATGTTTGGAAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CPGVQEPKEAGGVGSPELVHVKD*SMFGRA Trigger: CGCCCTTCCAAACATGGACAAATCTTTCACATGCAC...TAGCTCAGGAGATCCAACCCCTCCGGCTTCCTTGGGCTCCTGCACCCCTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTAGGAACCACCTAGAGTaGACATGCGCTCGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTRNHLE*TCARIS Trigger: AGAGATGCGAGCGCATGTCAACTCTAGGTGGTTCCT...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040250.15 |
||
| CDS CCA 90 bp | GAAATCTCTCATGAGGGCTTGCTCTCCCATCAGAGGGATAGCATCTaGAAAGTTCTTCTGGAAGAAGTCCAGCACATCGCTGCGCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EISHEGLLSHQRDSI*KVLLEEVQHIAARW Trigger: CCAACGCGCAGCGATGTGCTGGACTTCTTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGCAAGCCCTCATGAGAGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS CCA 90 bp | TGTGACTTCAGGTGGAAGGGAGAGCACTTCACTGATATCATGGGCTaGGCAGGCAACAGAAAGAAATCTCTCATGAGGGCTTGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CDFRWKGEHFTDIMG*AGNRKKSLMRACSP Trigger: GGGAGAGCAAGCCCTCATGAGAGATTTCTTTCTGTTGCCTGCCCAGCCCATGATATCAGTGAAGTGCTCTCCCTTCCACCTGAAGTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS GCA 90 bp | ATCATGGGCTGGGCAGGCAACAGAAAGAAATCTCTCATGAGGGCTTaGTCTCCCATCAGAGGGATAGCATCTGGAAAGTTCTTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IMGWAGNRKKSLMRA*SPIRGIASGKFFWK Trigger: CTTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGCAAGCCCTCATGAGAGATTTCTTTCTGTTGCCTGCCCAGCCCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCCTTGAAAATTCCTCTTaGCAAGAAAGCAGGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGPSQPAWRRQKRRGYLCLENSS*QESRHS Trigger: TGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAG...GCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAGTCAGCCAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTAAGATTTGTCCATGTTaGGAAGGGCGATCATCATAT | + |
|
Preference number: 5 (lower is better) Translates to: GPSQPAWRRQKRRGYLCTKICPC*EGRSSY Trigger: ATATGATGATCGCCCTTCCAAACATGGACAAATCTT...AGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTGGCTGACTGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS TCA 90 bp | AGTGTAATCAAAGCGGGGCTTCTTCATGAGGTGGGCTCTGACAGTTaGATAGGCTCCATCACACCCTACAACAAGGTCACATGTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SVIKAGLLHEVGSDS*IGSITPYNKVTCDI Trigger: GATGTCACATGTGACCTTGTTGTAGGGTGTGATGGAGCCTATTCAACTGTCAGAGCCCACCTCATGAAGAAGCCCCGCTTTGATTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS GCA 90 bp | CTGCCGTCCTCTATAAGAAAGGGCCAAGTTAATGCTCCTTCCACGTaGAGATTTAGCCACGCGAATATCTTCCCTAGCTTCGTACACATC | + |
|
Preference number: 5 (lower is better) Translates to: LPSSIRKGQVNAPST*RFSHANIFPSFVHI Trigger: GATGTGTACGAAGCTAGGGAAGATATTCGCGTGGCTAAATCTGCACGTGGAAGGAGCATTAACTTGGCCCTTTCTTATAGAGGACGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAAGTGCATGTGAAAGATTaGTCCATGTTTGGAAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGEDRSGEGICALHSDDEVHVKD*SMFGRA Trigger: CGCCCTTCCAAACATGGACAAATCTTTCACATGCAC...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS CCA 90 bp | ATCTGGAAAGTTCTTCTGGAAGAAGTCCAGCACATCGCTGCGCGTTaGAAGTCTTTCAAACTCCTCAAAGGGCATGAACAAGGTGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: IWKVLLEEVQHIAAR*KSFKLLKGHEQGAC Trigger: ACATGCACCTTGTTCATGCCCTTTGAGGAGTTTGAAAGACTTCCAACGCGCAGCGATGTGCTGGACTTCTTCCAGAAGAACTTTCCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAAGCAGTCAGCAGGTCCTaGTTTAAGTTTTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGEDRSGEGICALHSDDEAVSRS*FKFSLL Trigger: AAGCAGAGAAAACTTAAACAAGGACCTGCTGACTGC...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGTGGTTAAGACCACTGACTGCTCTTCCAGAGGTCCTAAGTTCAATTCCGCAGTCAGCAGGTCCTaGTTTAAGTTTTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSVVKTTDCSSRGPKFNSAVSRS*FKFSLL Trigger: AAGCAGAGAAAACTTAAACAAGGACCTGCTGACTGC...GGAATTGAACTTAGGACCTCTGGAAGAGCAGTCAGTGGTCTTAACCACTGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | CTTCAAAGCCTCTCCCATCAGAGGGATAGCATCTGGAAAGTTCTTCTGGAAGAAATGCATTTCGACAGCTaGTGGCCAAAGTGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQSLSHQRDSIWKVLLEEMHFDS*WPKCTF Trigger: GAAGGTGCACTTTGGCCACAAGCTGTCGAAATGCAT...TTCTTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGGCTTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATTCCATGAGGGATATATaGCTGAGTGTAATCAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLGEDRSGEGICALHSDDSMRDI*LSVIKA Trigger: CGCTTTGATTACACTCAGCAATATATCCCTCATGGA...ATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTTCTGGGCAATTGTGAGCTGCCTGAAATGGGTGCTGGGAGCTGAACTAGTAACTCCATGGAACTaGCAGAGAAATGTCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: AKFWAIVSCLKWVLGAELVTPWN*QRNVCT Trigger: AGTACAGACATTTCTCTGCAAGTTCCATGGAGTTAC...TAGTTCAGCTCCCAGCACCCATTTCAGGCAGCTCACAATTGCCCAGAACTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
||
| CDS CCA 90 bp | TTGCAGACTTCTTTCCCGAAAGAGAGTGGATCATTCTGGCTTTCATaGGCACACCTTTGGAAACGATCTGATCTTCCAGACCAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LQTSFPKESGSFWLS*AHLWKRSDLPDQWL Trigger: AAGCCATTGGTCTGGAAGATCAGATCGTTTCCAAAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAAGAAGTCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| CDS CCA 90 bp | CATAGGGAATTGCAGACTTCTTTCCCGAAAGAGAGTGGATCATTCTaGCTTTCATGGGCACACCTTTGGAAACGATCTGATCTTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRELQTSFPKESGSF*LSWAHLWKRSDLPD Trigger: GTCTGGAAGATCAGATCGTTTCCAAAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAAGAAGTCTGCAATTCCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGCCAATGCCAACGCAGCACTGCCTCGTGGTATCTTATTCTGGTGAAGGCTCCATGAGGGATATATaGCTGAGTGTAATCAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLPMPTQHCLVVSYSGEGSMRDI*LSVIKA Trigger: CGCTTTGATTACACTCAGCAATATATCCCTCATGGA...GCCTTCACCAGAATAAGATACCACGAGGCAGTGCTGCGTTGGCATTGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAACTTGAAAATTCCTCTTaGCAAGAAAGCAGGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGEDRSGEGICALHSDDELENSS*QESRHS Trigger: TGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAG...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | TCAAAATTGACAATGAAAAGAACTTCTAAGGGTCCCAGTCAGCCAGCTTGGAGAATGCATTTCGACAGCTaGTGGCCAAAGTGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKLTMKRTSKGPSQPAWRMHFDS*WPKCTF Trigger: GAAGGTGCACTTTGGCCACAAGCTGTCGAAATGCAT...TCTCCAAGCTGGCTGACTGGGACCCTTAGAAGTTCTTTTCATTGTCAATTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
||
| CDS-3UTR CAA 90 bp | GACCATGGTATAGAGAGGGATAAAGGTAGAGGGCATGATCGCGTGAAGAAATTTGTGCATGTGAAAGATTaGTCCATGTTTGGAAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DHGIERDKGRGHDRVKKFVHVKD*SMFGRA Trigger: CGCCCTTCCAAACATGGACAAATCTTTCACATGCAC...AAATTTCTTCACGCGATCATGCCCTCTACCTTTATCCCTCTCTATACCATGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
||
| CDS TCA 90 bp | GATTTAGCCACGCGAATATCTTCCCTAGCTTCGTACACATCAACTTaGAAATTCCTCTTTGCAAGAAAGCAGGCATTCAGTGCTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: DLATRISSLASYTST*KFLFARKQAFSAPT Trigger: GGTTGGAGCACTGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGAAGCTAGGGAAGATATTCGCGTGGCTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS GCA 90 bp | AATATCTTCCCTAGCTTCGTACACATCAACTTGAAAATTCCTCTTTaGAAGAAAGCAGGCATTCAGTGCTCCAACCTTAGTTGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: NIFPSFVHINLKIPL*KKAGIQCSNLSWQG Trigger: CCCCTGCCAACTAAGGTTGGAGCACTGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGAAGCTAGGGAAGATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| CDS-3UTR CAA 90 bp | CTTGGAGAAGACAGAAGCGGAGAGGGTATCTGTGCACTGCACTCTGATGATGAATTCGTACACATCAACTaGAAAATTCCTCTTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LGEDRSGEGICALHSDDEFVHIN*KIPLCK Trigger: CTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGAA...TTCATCATCAGAGTGCAGTGCACAGATACCCTCTCCGCTTCTGTCTTCTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS-3UTR CAA 90 bp | TGTATGTGTATGTGGAAATCAGAGGACAGCTTGTGGGAATCCGTTCTCTCCTTCTCCATGAGGGATATATaGCTGAGTGTAATCAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: CMCMWKSEDSLWESVLSFSMRDI*LSVIKA Trigger: CGCTTTGATTACACTCAGCAATATATCCCTCATGGA...GAAGGAGAGAACGGATTCCCACAAGCTGTCCTCTGATTTCCACATACACATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| CDS GCA 90 bp | AATATCTTCCCTAGCTTCGTACACATCAACTTGAAAATTCCTCTTTaGAAGAAAGCAGGCATTCAGTGCTCCAACCAAACCACCGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: NIFPSFVHINLKIPL*KKAGIQCSNQTTAN Trigger: ATTGGCGGTGGTTTGGTTGGAGCACTGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGAAGCTAGGGAAGATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CCA 90 bp | AATGTGAAGACAGTTAGGTTCCATGGCGTACTCCCCATTCTTAGGTaGAATTGTCAACTCCATGTATCCATGAGGGATATATTGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: NVKTVRFHGVLPILR*NCQLHVSMRDILLS Trigger: ACTCAGCAATATATCCCTCATGGATACATGGAGTTGACAATTCCACCTAAGAATGGGGAGTACGCCATGGAACCTAACTGTCTTCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS-3UTR CAA 90 bp | AAAGAGATGTTGGTTATTGCATTTTTAAATTGGAAGAGGCCCAGCCCAAGCACGTTTATCCAGGAGCTTTaGGAACAGGAACCACCTAGA | + |
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Preference number: 5 (lower is better) Translates to: KEMLVIAFLNWKRPSPSTFIQEL*EQEPPR Trigger: TCTAGGTGGTTCCTGTTCCAAAAGCTCCTGGATAAA...CGTGCTTGGGCTGGGCCTCTTCCAATTTAAAAATGCAATAACCAACATCTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040250.15 |
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| CDS-3UTR CAA 90 bp | TGTATGTGTATGTGGAAATCAGAGGACAGCTTGTGGGAATCCGTTCTCTCCTTCTTCGTACACATCAACTaGAAAATTCCTCTTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: CMCMWKSEDSLWESVLSFFVHIN*KIPLCK Trigger: CTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGAA...GAAGGAGAGAACGGATTCCCACAAGCTGTCCTCTGATTTCCACATACACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097458.4 |
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| CDS-3UTR CAA 90 bp | TTACTACTAACAACCCTTTCTCATCCTTCACTTAGAATGCCATTGATAGCTCTTATGCATTTCGACAGCTaGTGGCCAAAGTGCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: LLLTTLSHPSLRMPLIALMHFDS*WPKCTF Trigger: GAAGGTGCACTTTGGCCACAAGCTGTCGAAATGCAT...AAGAGCTATCAATGGCATTCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS-3UTR CAA 90 bp | CTGTTTATTTTTGCAGTGCTGGTGAATCTAACCCAGGGTCCTATGCAGGTTACAAAGATTTGTCCATGTTaGGAAGGGCGATCATCATAT | + |
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Preference number: 5 (lower is better) Translates to: LFIFAVLVNLTQGPMQVTKICPC*EGRSSY Trigger: ATATGATGATCGCCCTTCCAAACATGGACAAATCTT...TGTAACCTGCATAGGACCCTGGGTTAGATTCACCAGCACTGCAAAAATAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS-3UTR CAA 90 bp | TTGTACATAGATAGGTCTGAAATTGCATGGTCATCTGGGATCCTAAATCTTGAGGCAGTCAGCAGGTCCTaGTTTAAGTTTTCTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LYIDRSEIAWSSGILNLEAVSRS*FKFSLL Trigger: AAGCAGAGAAAACTTAAACAAGGACCTGCTGACTGC...CTCAAGATTTAGGATCCCAGATGACCATGCAATTTCAGACCTATCTATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| CDS-3UTR CAA 90 bp | TGGAAGAGGAATCAAACATTTGCTACCCAGAACTTTGACACTATGGTTGGTGAAAAGATTTGTCCATGTTaGGAAGGGCGATCATCATAT | + |
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Preference number: 5 (lower is better) Translates to: WKRNQTFATQNFDTMVGEKICPC*EGRSSY Trigger: ATATGATGATCGCCCTTCCAAACATGGACAAATCTT...TTCACCAACCATAGTGTCAAAGTTCTGGGTAGCAAATGTTTGATTCCTCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS-3UTR CAA 90 bp | TTACTACTAACAACCCTTTCTCATCCTTCACTTAGAATGCCATTGATAGCTCTTGTAACTCCATGGAACTaGCAGAGAAATGTCTGTACT | + |
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Preference number: 5 (lower is better) Translates to: LLLTTLSHPSLRMPLIALVTPWN*QRNVCT Trigger: AGTACAGACATTTCTCTGCAAGTTCCATGGAGTTAC...AAGAGCTATCAATGGCATTCTAAGTGAAGGATGAGAAAGGGTTGTTAGTAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS-3UTR CAA 90 bp | TTATTGAATTTGTCCATCAATTCATCAAACACCAAGCAGTCTTCAAAGCCTCTCCTTGAAAATTCCTCTTaGCAAGAAAGCAGGCATTCA | + |
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Preference number: 5 (lower is better) Translates to: LLNLSINSSNTKQSSKPLLENSS*QESRHS Trigger: TGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAG...GAGAGGCTTTGAAGACTGCTTGGTGTTTGATGAATTGATGGACAAATTCAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| CDS CCA 72 bp | GCGGCATCTCCCATCAGCACACAGTGTGACTTCAGGTaGAAGGGAGAGCACTTCACTGATATCATGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AASPISTQCDFR*KGEHFTDIMGW Trigger: CCAGCCCATGATATCAGTGAAGTGCTCTCCCTTCCACCTGAAGTCACACTGTGTGCTGATGGGAGATGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS TCA 72 bp | AATAGGCTCCATCACACCCTACAACAAGGTCACATGTaGCATCTCGGGGAACCTTGTCAGGTCCGAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: NRLHHTLQQGHM*HLGEPCQVRAL Trigger: CAGTGCTCGGACCTGACAAGGTTCCCCGAGATGTCACATGTGACCTTGTTGTAGGGTGTGATGGAGCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS TCA 72 bp | ATTCTGGCTTTCATGGGCACACCTTTGGAAACGATCTaGTCTTCCAGACCAATGGCTTTCAAGGCCTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: ILAFMGTPLETI*SSRPMAFKACR Trigger: ACGGCAGGCCTTGAAAGCCATTGGTCTGGAAGATCAGATCGTTTCCAAAGGTGTGCCCATGAAAGCCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS GCA 72 bp | TGGGCAGGCAACAGAAAGAAATCTCTCATGAGGGCTTaGTCTCCCATCAGAGGGATAGCATCTGGAAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: WAGNRKKSLMRA*SPIRGIASGKF Trigger: GAACTTTCCAGATGCTATCCCTCTGATGGGAGAGCAAGCCCTCATGAGAGATTTCTTTCTGTTGCCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CCA 72 bp | GCACACCTTTGGAAACGATCTGATCTTCCAGACCAATaGCTTTCAAGGCCTGCCGTCCTCTATAAGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: AHLWKRSDLPDQ*LSRPAVLYKKG Trigger: CCCTTTCTTATAGAGGACGGCAGGCCTTGAAAGCCATTGGTCTGGAAGATCAGATCGTTTCCAAAGGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CAA 72 bp | CTGGGCAGGCAACAGAAAGAAATCTCTCATGAGGGCTaGCTCTCCCATCAGAGGGATAGCATCTGGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LGRQQKEISHEG*LSHQRDSIWKV Trigger: AACTTTCCAGATGCTATCCCTCTGATGGGAGAGCAAGCCCTCATGAGAGATTTCTTTCTGTTGCCTGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CAA 90 bp | TATCATGGGCTGGGCAGGCAACAGAAAGAAATCTCTCATGAGGGCTaGCTCTCCCATCAGAGGGATAGCATCTGGAAAGTTCTTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: YHGLGRQQKEISHEG*LSHQRDSIWKVLLE Trigger: TTCCAGAAGAACTTTCCAGATGCTATCCCTCTGATGGGAGAGCAAGCCCTCATGAGAGATTTCTTTCTGTTGCCTGCCCAGCCCATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CCA 72 bp | GTTCTTCTGGAAGAAGTCCAGCACATCGCTGCGCGTTaGAAGTCTTTCAAACTCCTCAAAGGGCATGAACAA | + |
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Preference number: 6 (lower is better) Translates to: VLLEEVQHIAAR*KSFKLLKGHEQ Trigger: TTGTTCATGCCCTTTGAGGAGTTTGAAAGACTTCCAACGCGCAGCGATGTGCTGGACTTCTTCCAGAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CCA 72 bp | GAGAGTGGATCATTCTGGCTTTCATGGGCACACCTTTaGAAACGATCTGATCTTCCAGACCAATGGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ESGSFWLSWAHL*KRSDLPDQWLS Trigger: TGAAAGCCATTGGTCTGGAAGATCAGATCGTTTCCAAAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CCA 72 bp | TCTTTCCCGAAAGAGAGTGGATCATTCTGGCTTTCATaGGCACACCTTTGGAAACGATCTGATCTTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SFPKESGSFWLS*AHLWKRSDLPD Trigger: GTCTGGAAGATCAGATCGTTTCCAAAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS GCA 72 bp | TCTATAAGAAAGGGCCAAGTTAATGCTCCTTCCACGTaGAGATTTAGCCACGCGAATATCTTCCCTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SIRKGQVNAPST*RFSHANIFPSF Trigger: GAAGCTAGGGAAGATATTCGCGTGGCTAAATCTGCACGTGGAAGGAGCATTAACTTGGCCCTTTCTTATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CCA 72 bp | TTGCAGACTTCTTTCCCGAAAGAGAGTGGATCATTCTaGCTTTCATGGGCACACCTTTGGAAACGATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LQTSFPKESGSF*LSWAHLWKRSD Trigger: ATCAGATCGTTTCCAAAGGTGTGCCCATGAAAGCCAGAATGATCCACTCTCTTTCGGGAAAGAAGTCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CAA 90 bp | ATTCTTAGGTGGAATTGTCAACTCCATGTATCCATGAGGGATATATaGCTGAGTGTAATCAAAGCGGGGCTTCTTCATGAGGTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ILRWNCQLHVSMRDI*LSVIKAGLLHEVGS Trigger: AGAGCCCACCTCATGAAGAAGCCCCGCTTTGATTACACTCAGCAATATATCCCTCATGGATACATGGAGTTGACAATTCCACCTAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CCA 72 bp | ACAGTTAGGTTCCATGGCGTACTCCCCATTCTTAGGTaGAATTGTCAACTCCATGTATCCATGAGGGATATA | + |
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Preference number: 6 (lower is better) Translates to: TVRFHGVLPILR*NCQLHVSMRDI Trigger: TATATCCCTCATGGATACATGGAGTTGACAATTCCACCTAAGAATGGGGAGTACGCCATGGAACCTAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CAA 90 bp | AGATTTAGCCACGCGAATATCTTCCCTAGCTTCGTACACATCAACTaGAAAATTCCTCTTTGCAAGAAAGCAGGCATTCAGTGCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RFSHANIFPSFVHIN*KIPLCKKAGIQCSN Trigger: GTTGGAGCACTGAATGCCTGCTTTCTTGCAAAGAGGAATTTTCAAGTTGATGTGTACGAAGCTAGGGAAGATATTCGCGTGGCTAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CCA 72 bp | CATGAACAAGGTGCATGTGAAAGATTTGTCCATGTTTaGAAGGGCGATCATCATATAGGCATTTCTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HEQGACERFVHV*KGDHHIGISRP Trigger: TGGCCTAGAAATGCCTATATGATGATCGCCCTTCCAAACATGGACAAATCTTTCACATGCACCTTGTTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 |
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| CDS CCA 72 bp | CATGAACAAGGTGCATGTGAAAGATTTGTCCATGTTTaGAAGGGCGATCATCATATAGGCATTTCTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HEQGACERFVHV*KGDHHIGISPH Trigger: ATGGGGAGAAATGCCTATATGATGATCGCCCTTCCAAACATGGACAAATCTTTCACATGCACCTTGTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140474.8 |
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| CDS CAA 72 bp | TGGAATTGTCAACTCCATGTATCCATGAGGGATATATaGCTGAGTGTAATCAAAGCGGGGCTTCTTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: WNCQLHVSMRDI*LSVIKAGLLHE Trigger: CTCATGAAGAAGCCCCGCTTTGATTACACTCAGCAATATATCCCTCATGGATACATGGAGTTGACAATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CAA 90 bp | CTCTGCTTATTGAAAGGATATACTGTGACTTGTTCCCATAGGGAATaGCAGACTTCTTTCCCGAAAGAGAGTGGATCATTCTGGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LCLLKGYTVTCSHRE*QTSFPKESGSFWLS Trigger: TGAAAGCCAGAATGATCCACTCTCTTTCGGGAAAGAAGTCTGCAATTCCCTATGGGAACAAGTCACAGTATATCCTTTCAATAAGCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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| CDS CAA 72 bp | TTGAAAGGATATACTGTGACTTGTTCCCATAGGGAATaGCAGACTTCTTTCCCGAAAGAGAGTGGATCATTC | + |
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Preference number: 6 (lower is better) Translates to: LKGYTVTCSHRE*QTSFPKESGSF Trigger: GAATGATCCACTCTCTTTCGGGAAAGAAGTCTGCAATTCCCTATGGGAACAAGTCACAGTATATCCTTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040250.15 ENSMUST00000097458.4 ENSMUST00000140474.8 |
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