Pregenerated sensors for KLRK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030149Ensembl transcript IDs: ENSMUST00000032252.8, ENSMUST00000095412.10, ENSMUST00000168919.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTGTCCCTCCCAGACAGCAGGCTGCTTTCTTGAGTCACTGAGATaGCAACACTGCCAGGCACAGCACTCCCTGTGGTCCCTGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: CCPSQTAGCFLESLR*QHCQAQHSLWSLLW Trigger: CCACAGCAGGGACCACAGGGAGTGCTGTGCCTGGCAGTGTTGCCATCTCAGTGACTCAAGAAAGCAGCCTGCTGTCTGGGAGGGACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CCA 90 bp | GCAACACCACCTCCTCCAGTAGGGCAGGACCATATTTCCCTAGTTTaGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ATPPPPVGQDHISLV*IGFNHTLGPPVPSS Trigger: GGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGAGGAGGTGGTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR TCA 90 bp | AAAGTGAGTTCCATGAGATTGTCAAGTTCCAAAAGCAGTCCTGCTTaGCCTTTCTCAGAGAGTCTCTGCTGTCCCTCCCAGACAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: KVSSMRLSSSKSSPA*PFSESLCCPSQTAG Trigger: GCCTGCTGTCTGGGAGGGACAGCAGAGACTCTCTGAGAAAGGTCAAGCAGGACTGCTTTTGGAACTTGACAATCTCATGGAACTCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR GCA 90 bp | CAACAAAGTGAGTTCCATGAGATTGTCAAGTTCCAAAAGCAGTCCTaGTTGACCTTTCTCAGAGAGTCTCTGCTGTCCCTCCCAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: QQSEFHEIVKFQKQS*LTFLRESLLSLPDS Trigger: GCTGTCTGGGAGGGACAGCAGAGACTCTCTGAGAAAGGTCAAGCAGGACTGCTTTTGGAACTTGACAATCTCATGGAACTCACTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR GCA 90 bp | ATGTGTTTAGCTAATCATTTGGTGGAGGGTGCAGACCTGCTGTTTTaGTTTTGTCTTATGCCCAGTCTCTTCTTCTTAGTCCCAATTTCT | + |
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Preference number: 1 (lower is better) Translates to: MCLANHLVEGADLLF*FCLMPSLFFLVPIS Trigger: AGAAATTGGGACTAAGAAGAAGAGACTGGGCATAAGACAAAAGCAAAACAGCAGGTCTGCACCCTCCACCAAATGATTAGCTAAACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR GCA 90 bp | ATTTTTATTTTGAGTGCTTGTCTTCACTCATCTATGTACAAGATATaGATGCAGGTGACTGTAGAAACCAGAGAGGGTGTTGGGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: IFILSACLHSSMYKI*MQVTVETREGVGSS Trigger: AGAGGACCCAACACCCTCTCTGGTTTCTACAGTCACCTGCATGCATATCTTGTACATAGATGAGTGAAGACAAGCACTCAAAATAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CCA 90 bp | CTCCCACAGTTTTATTATAGTCTCTCAGATGAAAGTAAGGCTCTGTaGCTCCCTTTCTGTTGTGATTCTCTGTGTTATTTATATATGATG | + |
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Preference number: 1 (lower is better) Translates to: LPQFYYSLSDESKAL*LPFCCDSLCYLYMM Trigger: CATCATATATAAATAACACAGAGAATCACAACAGAAAGGGAGCCACAGAGCCTTACTTTCATCTGAGAGACTATAATAAAACTGTGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CAA 90 bp | GGCAACACCACCTCCTCCAGTAGGGCAGGACCATATTTCCCTAGTTaGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GNTTSSSRAGPYFPS*DRLQPHSWSSCSLF Trigger: GAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGAGGAGGTGGTGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTAGGGCAGGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTCTTCCCCTGTCTCATaGTTCCTTGGCCCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSRAGPYFPSLDRLQPHSSSPVS*FLGPTG Trigger: GCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGA...AGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCATCATTTGGTGGAGGGTaGAGACCTGCTGTTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IWEEIKVLRVYWATPPPPSFGGG*RPAVLL Trigger: AAGCAAAACAGCAGGTCTGCACCCTCCACCAAATGA...TGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCCCCTGTCTCATTTGGTGGAGGGTaGAGACCTGCTGTTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: VWIGFNHTLGPPVPSSPVSFGGG*RPAVLL Trigger: AAGCAAAACAGCAGGTCTGCACCCTCCACCAAATGA...GACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR CAA 90 bp | CAAAGTGAGTTCCATGAGATTGTCAAGTTCCAAAAGCAGTCCTGCTaGACCTTTCTCAGAGAGTCTCTGCTGTCCCTCCCAGACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QSEFHEIVKFQKQSC*TFLRESLLSLPDSR Trigger: CCTGCTGTCTGGGAGGGACAGCAGAGACTCTCTGAGAAAGGTCAAGCAGGACTGCTTTTGGAACTTGACAATCTCATGGAACTCACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CAA 90 bp | GAGGGTGTTGGGTCCTCTGGAAGTGGGGTTACAGCTGGTTATGGGTaGTCATACAGGTGCTGTGAAGTGAACCCAAGTCTTAACCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: EGVGSSGSGVTAGYG*SYRCCEVNPSLNLF Trigger: AAAGAGGTTAAGACTTGGGTTCACTTCACAGCACCTGTATGACAACCCATAACCAGCTGTAACCCCACTTCCAGAGGACCCAACACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTGCAGACCTGCTGTTTTaGTTTTGTCTTATGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GDIWEEIKVLRVYWATPPADLLF*FCLMPS Trigger: ACTGGGCATAAGACAAAAGCAAAACAGCAGGTCTGC...AGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCAGTAGCAGACCTGCTGTTTTaGTTTTGTCTTATGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WEEIKVLRVYWATPPPPVADLLF*FCLMPS Trigger: ACTGGGCATAAGACAAAAGCAAAACAGCAGGTCTGC...TACTGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | GATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTTGGAGGGTGCAGACCTaGTGTTTTGCTTTTGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: DIWEEIKVLRVYWATPPPWRVQT*CFAFVL Trigger: TAAGACAAAAGCAAAACAGCAGGTCTGCACCCTCCA...AGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCATATTTCCCTAGTTTaGATAGGCTTCAACCACACT | + |
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Preference number: 2 (lower is better) Translates to: GDIWEEIKVLRVYWATPPHISLV*IGFNHT Trigger: AGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATG...AGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCAGTACATATTTCCCTAGTTTaGATAGGCTTCAACCACACT | + |
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Preference number: 2 (lower is better) Translates to: WEEIKVLRVYWATPPPPVHISLV*IGFNHT Trigger: AGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATG...TACTGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTAGGGCAGGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGAGGGTGCAGACCTaGTGTTTTGCTTTTGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SSRAGPYFPSLDRLQPHSWRVQT*CFAFVL Trigger: TAAGACAAAAGCAAAACAGCAGGTCTGCACCCTCCA...AGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | TCGATGGCTACTGATAACCACATCTACTGTTTATTGATGAGGTCATTGTGCAGGCTTCAACCACACTCTTaGTCCTCCTGTTCCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SMATDNHIYCLLMRSLCRLQPHS*SSCSLF Trigger: GAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAG...CCTGCACAATGACCTCATCAATAAACAGTAGATGTGGTTATCAGTAGCCATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | TCGATGGCTACTGATAACCACATCTACTGTTTATTGATGAGGTCATTGTGCAGGTCATTTGGTGGAGGGTaGAGACCTGCTGTTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SMATDNHIYCLLMRSLCRSFGGG*RPAVLL Trigger: AAGCAAAACAGCAGGTCTGCACCCTCCACCAAATGA...CCTGCACAATGACCTCATCAATAAACAGTAGATGTGGTTATCAGTAGCCATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | CATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCACAATTCTCTTGTTCTaGTTGTTGCTGAGATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: HISLVWIGFNHTLGPPVPTILLF*LLLRWV Trigger: TACCCATCTCAGCAACAACCAGAACAAGAGAATTGT...GGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCATCTCAAGTGGAAAGCATATGAAAGAGTGGGAGAATCCCAAGAAAGCACAGCAGACCTGCTGTTTTaGTTTTGTCTTATGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: CHLKWKAYERVGESQESTADLLF*FCLMPS Trigger: ACTGGGCATAAGACAAAAGCAAAACAGCAGGTCTGC...TGTGCTTTCTTGGGATTCTCCCACTCTTTCATATGCTTTCCACTTGAGATGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CAA 90 bp | GAATCCCTCATTCAGAGGATCCCAAAGCTAAATCGCATGTTTCTATaGCTTCACAAAAACTTTCAAAACAGAAACCTAAGGCTCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: ESLIQRIPKLNRMFL*LHKNFQNRNLRLPQ Trigger: CTGTGGGAGCCTTAGGTTTCTGTTTTGAAAGTTTTTGTGAAGCAATAGAAACATGCGATTTAGCTTTGGGATCCTCTGAATGAGGGATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCATCTCAAGTGGAAAGCATATGAAAGAGTGGGAGAATCCCAAGAAAGCACACATATTTCCCTAGTTTaGATAGGCTTCAACCACACT | + |
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Preference number: 2 (lower is better) Translates to: CHLKWKAYERVGESQESTHISLV*IGFNHT Trigger: AGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATG...TGTGCTTTCTTGGGATTCTCCCACTCTTTCATATGCTTTCCACTTGAGATGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CAA 90 bp | GAAGTCTGGGAATCGATGGCTACTGATAACCACATCTACTGTTTATaGATGAGGTCATTGTGCAGGTTGTATATCAGAATTATCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EVWESMATDNHIYCL*MRSLCRLYIRIILC Trigger: ACACAGGATAATTCTGATATACAACCTGCACAATGACCTCATCAATAAACAGTAGATGTGGTTATCAGTAGCCATCGATTCCCAGACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTATGGGAACACAATGTGTTTAGCTAATCATTTGGTGGAGGGTGCAGACACAATTCTCTTGTTCTaGTTGTTGCTGAGATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LFYGNTMCLANHLVEGADTILLF*LLLRWV Trigger: TACCCATCTCAGCAACAACCAGAACAAGAGAATTGT...GTCTGCACCCTCCACCAAATGATTAGCTAAACACATTGTGTTCCCATAAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR CAA 90 bp | TCGATGGCTACTGATAACCACATCTACTGTTTATTGATGAGGTCATaGTGCAGGTTGTATATCAGAATTATCCTGTGTTCTCTTATAGCT | + |
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Preference number: 2 (lower is better) Translates to: SMATDNHIYCLLMRS*CRLYIRIILCSLIA Trigger: AGCTATAAGAGAACACAGGATAATTCTGATATACAACCTGCACAATGACCTCATCAATAAACAGTAGATGTGGTTATCAGTAGCCATCGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGAGGTACAAAATACAAAATCATTTGGTGTATAACTTATACCCATGGCTCACAATTCTCTTGTTCTaGTTGTTGCTGAGATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: TWRYKIQNHLVYNLYPWLTILLF*LLLRWV Trigger: TACCCATCTCAGCAACAACCAGAACAAGAGAATTGT...GAGCCATGGGTATAAGTTATACACCAAATGATTTTGTATTTTGTACCTCCACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR TCA 90 bp | ACGTGGAGGTACAAAATACAAAATCATTTGGTGTATAACTTATACCCATGGCTCACAGTTCCTCTGTTTTaGTTCCATCTTGAAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: TWRYKIQNHLVYNLYPWLTVPLF*FHLEME Trigger: TTCCATTTCAAGATGGAATCAAAACAGAGGAACTGT...GAGCCATGGGTATAAGTTATACACCAAATGATTTTGTATTTTGTACCTCCACGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTCTGGTCTCAGCTTATTTGGGATTATATTATAAAATACAACAGATCAAGGCTTCCCTTGTTTTATaGGAACACAATGTGTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SPLVSAYLGLYYKIQQIKASLVL*EHNVFS Trigger: GCTAAACACATTGTGTTCCCATAAAACAAGGGAAGC...CTTGATCTGTTGTATTTTATAATATAATCCCAAATAAGCTGAGACCAGAGGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR TCA 72 bp | TCTCTGCTGTCCCTCCCAGACAGCAGGCTGCTTTCTTaGGTCACTGAGATGGCAACACTGCCAGGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLLSLPDSRLLS*VTEMATLPGTA Trigger: TGCTGTGCCTGGCAGTGTTGCCATCTCAGTGACTCAAGAAAGCAGCCTGCTGTCTGGGAGGGACAGCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCCCTGTTTAGCTAATCATTaGGTGGAGGGTGCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: SSCSLFPCLMVPWPHRLPCLANH*VEGADL Trigger: CAGGTCTGCACCCTCCACCAAATGATTAGCTAAACA...GGGAAGCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGAGGGAACAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR GCA 72 bp | TCAGAGAGTCTCTGCTGTCCCTCCCAGACAGCAGGCTaGTTTCTTGAGTCACTGAGATGGCAACACTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SESLCCPSQTAG*FLESLRWQHCQ Trigger: CTGGCAGTGTTGCCATCTCAGTGACTCAAGAAAGCAGCCTGCTGTCTGGGAGGGACAGCAGAGACTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCCCCTGCTGTTTTGCTTTaGTCTTATGCCCAGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VLLFPLPLSHGSLAPQASPAVLL*SYAQSL Trigger: AAGAGACTGGGCATAAGACAAAAGCAAAACAGCAGG...GGAAGCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGAGGGAACAGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | GTAGGGGATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACTGTCTCATGGTTCCTaGGCCCCACAGGCTTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VGDIWEEIKVLRVYWATPLSHGS*APQASL Trigger: AAGGGAAGCCTGTGGGGCCAAGGAACCATGAGACAG...TGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATCCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000168919.8 |
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| 3UTR CCA 72 bp | ATGCATGCAGGTGACTGTAGAAACCAGAGAGGGTGTTaGGTCCTCTGGAAGTGGGGTTACAGCTGGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: MHAGDCRNQRGC*VLWKWGYSWLW Trigger: CCATAACCAGCTGTAACCCCACTTCCAGAGGACCCAACACCCTCTCTGGTTTCTACAGTCACCTGCATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CCA 72 bp | CCTCCTCCAGTAGGGCAGGACCATATTTCCCTAGTTTaGATAGGCTTCAACCACACTCTTGGTCCTCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: PPPVGQDHISLV*IGFNHTLGPPV Trigger: AACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR CCA 72 bp | TGTAGAAACCAGAGAGGGTGTTGGGTCCTCTGGAAGTaGGGTTACAGCTGGTTATGGGTTGTCATACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: CRNQRGCWVLWK*GYSWLWVVIQV Trigger: CACCTGTATGACAACCCATAACCAGCTGTAACCCCACTTCCAGAGGACCCAACACCCTCTCTGGTTTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCAGTACCTGCTGTTTTGCTTTaGTCTTATGCCCAGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: WEEIKVLRVYWATPPPPVPAVLL*SYAQSL Trigger: AAGAGACTGGGCATAAGACAAAAGCAAAACAGCAGG...TACTGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | GATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTTGTTTAGCTAATCATTaGGTGGAGGGTGCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: DIWEEIKVLRVYWATPPPCLANH*VEGADL Trigger: CAGGTCTGCACCCTCCACCAAATGATTAGCTAAACA...AGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR TCA 72 bp | TCCATGAGATTGTCAAGTTCCAAAAGCAGTCCTGCTTaGCCTTTCTCAGAGAGTCTCTGCTGTCCCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SMRLSSSKSSPA*PFSESLCCPSQ Trigger: CTGGGAGGGACAGCAGAGACTCTCTGAGAAAGGTCAAGCAGGACTGCTTTTGGAACTTGACAATCTCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCAATTCTCTTGTTCTGGTaGTTGCTGAGATGGGTAATG | + |
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Preference number: 3 (lower is better) Translates to: IWEEIKVLRVYWATPPPPILLFW*LLRWVM Trigger: CATTACCCATCTCAGCAACAACCAGAACAAGAGAAT...TGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAAAAGATACAGATTTGTTTTCCTGCAAAGAGTGCTAGGCAGACCTTGGGCTAAACCAGAGAGGGTGTaGGGTCCTCTGGAAGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LKRYRFVFLQRVLGRPWAKPERV*GPLEVG Trigger: CCCCACTTCCAGAGGACCCAACACCCTCTCTGGTTT...AGCCCAAGGTCTGCCTAGCACTCTTTGCAGGAAAACAAATCTGTATCTTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR GCA 72 bp | GAGTTCCATGAGATTGTCAAGTTCCAAAAGCAGTCCTaGTTGACCTTTCTCAGAGAGTCTCTGCTGTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EFHEIVKFQKQS*LTFLRESLLSL Trigger: GAGGGACAGCAGAGACTCTCTGAGAAAGGTCAAGCAGGACTGCTTTTGGAACTTGACAATCTCATGGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR CCA 72 bp | TATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTaGTCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YFPSLDRLQPHS*SSCSLFPCLMV Trigger: AACCATGAGACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCATTCTCTTGTTCTGGTaGTTGCTGAGATGGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: HISLVWIGFNHTLGPPVPILLFW*LLRWVM Trigger: CATTACCCATCTCAGCAACAACCAGAACAAGAGAAT...GGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR TCA 72 bp | TCCAGTTCTCACAGTTCCTCTGTTTTGATTCCATCTTaGAATGGAAGCTCCTCCTCGTCTTCTTCCCCATAT | + |
|
Preference number: 3 (lower is better) Translates to: SSSHSSSVLIPS*NGSSSSSSSPY Trigger: ATATGGGGAAGAAGACGAGGAGGAGCTTCCATTTCAAGATGGAATCAAAACAGAGGAACTGTGAGAACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR TCA 72 bp | GGGTTTTATTCTCCAGTTCTCACAGTTCCTCTGTTTTaGTTCCATCTTGAAATGGAAGCTCCTCCTCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GFYSPVLTVPLF*FHLEMEAPPRL Trigger: AAGACGAGGAGGAGCTTCCATTTCAAGATGGAATCAAAACAGAGGAACTGTGAGAACTGGAGAATAAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR TCA 72 bp | CAGCTGGTTATGGGTTGTCATACAGGTGCTGTGAAGTaGACCCAAGTCTTAACCTCTTTACTTGTGTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QLVMGCHTGAVK*TQVLTSLLVFL Trigger: TAAGAACACAAGTAAAGAGGTTAAGACTTGGGTTCACTTCACAGCACCTGTATGACAACCCATAACCAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCATTTGGTGTATAACTTATACCCATGGCTCCAGGAGTCCATCTCCTCACTTATTCTCTTGTTCTGGTaGTTGCTGAGATGGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: NHLVYNLYPWLQESISSLILLFW*LLRWVM Trigger: CATTACCCATCTCAGCAACAACCAGAACAAGAGAAT...AAGTGAGGAGATGGACTCCTGGAGCCATGGGTATAAGTTATACACCAAATGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATCCCAAGAAAGCACAAAAATCAACAAAGTGAGTTCCATGAGATTGTCAAGTCCCCACAGGCTTCCCTaGTTTTATGGGAACACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ESQESTKINKVSSMRLSSPHRLP*FYGNTM Trigger: CATTGTGTTCCCATAAAACAAGGGAAGCCTGTGGGG...ACTTGACAATCTCATGGAACTCACTTTGTTGATTTTTGTGCTTTCTTGGGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR TCA 72 bp | CCAAGTCTTAACCTCTTTACTTGTGTTCTTAACCTCTaGGCCACCTCTCCAGCCCTGTTTTCAAATTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLNLFTCVLNL*ATSPALFSNFS Trigger: TGAAAAATTTGAAAACAGGGCTGGAGAGGTGGCTCAGAGGTTAAGAACACAAGTAAAGAGGTTAAGACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR CCA 72 bp | AAAATACAAAATCATTTGGTGTATAACTTATACCCATaGCTCCAGGAGTCCATCTCCTCACTTGCAAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KIQNHLVYNLYP*LQESISSLANC Trigger: ACAGTTTGCAAGTGAGGAGATGGACTCCTGGAGCCATGGGTATAAGTTATACACCAAATGATTTTGTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR CCA 72 bp | TTTTATTATAGTCTCTCAGATGAAAGTAAGGCTCTGTaGCTCCCTTTCTGTTGTGATTCTCTGTGTTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: FYYSLSDESKAL*LPFCCDSLCYL Trigger: TAAATAACACAGAGAATCACAACAGAAAGGGAGCCACAGAGCCTTACTTTCATCTGAGAGACTATAATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCCCCCACTTTGCTGGCTTaGGGTCGTAATTATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLLFPLPLSHGSLAPQASPTLLA*GRNYGI Trigger: AATGCCATAATTACGACCTCAAGCCAGCAAAGTGGG...GGAAGCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGAGGGAACAGGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR GCA 90 bp | GGGGATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCTGCCAGGAGCCATTTaGTGGGATCTGGACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDIWEEIKVLRVYWATPPLPGAI*WDLDQS Trigger: GGACTGGTCCAGATCCCAGCAAATGGCTCCTGGCAG...AGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCCGCTGAAACGTCTCTTTaGAAATGGCAAGCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLFPLPLSHGSLAPQASAETSL*KWQATS Trigger: TGATGTGGCTTGCCATTTTCAAAGAGACGTTTCAGC...GGAAGCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGAGGGAACAGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCAGAAGGCTGGAATTTTaGGACAAACAGGAAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPPVPSSPVSWFLGPTGFRRLEF*DKQEAW Trigger: CCAAGCTTCCTGTTTGTCTCAAAATTCCAGCCTTCT...GAAGCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGAGGGAACAGGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCCTGTTCCCTCTTCCCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCCGGTATCTTCCTCTTATaGTACCATTTTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLFPLPLSHGSLAPQASGIFLL*YHFLQV Trigger: AACCTGGAGAAAATGGTATCATAAGAGGAAGATACC...GGAAGCCTGTGGGGCCAAGGAACCATGAGACAGGGGAAGAGGGAACAGGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | ACCTCCTCCAGTAGGGCAGGACCATATTTCCCTAGTTaGGATAGGCTTCAACCACACTCTTGGTCCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSSRAGPYFPS*DRLQPHSWSSC Trigger: ACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | GGGTCCTCTGGAAGTGGGGTTACAGCTGGTTATGGGTaGTCATACAGGTGCTGTGAAGTGAACCCAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGSGVTAGYG*SYRCCEVNPSL Trigger: AAGACTTGGGTTCACTTCACAGCACCTGTATGACAACCCATAACCAGCTGTAACCCCACTTCCAGAGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCCCCTGTCCCACTTTGCTGGCTTaGGGTCGTAATTATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SLDRLQPHSWSSCSLFPCPTLLA*GRNYGI Trigger: AATGCCATAATTACGACCTCAAGCCAGCAAAGTGGG...ACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GGGGATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTGCTGAAACGTCTCTTTaGAAATGGCAAGCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: GDIWEEIKVLRVYWATPPAETSL*KWQATS Trigger: TGATGTGGCTTGCCATTTTCAAAGAGACGTTTCAGC...AGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000168919.8 |
||
| CDS-3UTR GCA 90 bp | CCCAATTTCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATCTGCCAGGAGCCATTTaGTGGGATCTGGACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNFSRDNSLVLVVAEMGNLPGAI*WDLDQS Trigger: GGACTGGTCCAGATCCCAGCAAATGGCTCCTGGCAG...ATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCCCCTGTAGAAGGCTGGAATTTTaGGACAAACAGGAAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLDRLQPHSWSSCSLFPCRRLEF*DKQEAW Trigger: CCAAGCTTCCTGTTTGTCTCAAAATTCCAGCCTTCT...ACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCCCCTGTCTCAGTATCCCACTTTGCTaGCTTGAGGTCGTAATTATG | + |
|
Preference number: 4 (lower is better) Translates to: LDRLQPHSWSSCSLFPCLSIPLC*LEVVIM Trigger: CATAATTACGACCTCAAGCCAGCAAAGTGGGATACT...GAGACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCAGTAAGTATCCCACTTTGCTaGCTTGAGGTCGTAATTATG | + |
|
Preference number: 4 (lower is better) Translates to: WEEIKVLRVYWATPPPPVSIPLC*LEVVIM Trigger: CATAATTACGACCTCAAGCCAGCAAAGTGGGATACT...TACTGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | TTCCATGAGATTGTCAAGTTCCAAAAGCAGTCCTGCTaGACCTTTCTCAGAGAGTCTCTGCTGTCCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHEIVKFQKQSC*TFLRESLLSLP Trigger: TGGGAGGGACAGCAGAGACTCTCTGAGAAAGGTCAAGCAGGACTGCTTTTGGAACTTGACAATCTCATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTCCCACTTTGCTGGCTTaGGGTCGTAATTATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GPYFPSLDRLQPHSWSSCPTLLA*GRNYGI Trigger: AATGCCATAATTACGACCTCAAGCCAGCAAAGTGGG...ACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR GCA 90 bp | GATATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCGTAATTATGGCATTTaGTCATCTCTGAGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: DIWEEIKVLRVYWATPPPRNYGI*SSLSDE Trigger: CTCATCACTCAGAGATGAGCAAATGCCATAATTACG...AGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032252.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCCCCTGTCATATCTTCAGAAGGCTaGAATTTTGAGACAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWIGFNHTLGPPVPSSPVISSEG*NFETNR Trigger: CCTGTTTGTCTCAAAATTCCAGCCTTCTGAAGATAT...GACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | CCCTGTCTCATGGTTCCTTGGCCCCACAGGCTTCCCTaGTTTTATGGGAACACAATGTGTTTAGCTAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCLMVPWPHRLP*FYGNTMCLANH Trigger: ATGATTAGCTAAACACATTGTGTTCCCATAAAACAAGGGAAGCCTGTGGGGCCAAGGAACCATGAGACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR GCA 90 bp | CCCAATTTCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATCTGGGACTTCCTTGTTaGACAATACTGGCTGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: PNFSRDNSLVLVVAEMGNLGLPC*TILAET Trigger: CGTTTCAGCCAGTATTGTGCAACAAGGAAGTCCCAG...ATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 |
||
| 3UTR CAA 72 bp | TCATTTGGTGGAGGGTGCAGACCTGCTGTTTTGCTTTaGTCTTATGCCCAGTCTCTTCTTCTTAGTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFGGGCRPAVLL*SYAQSLLLSPN Trigger: ATTGGGACTAAGAAGAAGAGACTGGGCATAAGACAAAAGCAAAACAGCAGGTCTGCACCCTCCACCAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | CTCCAGTTCTCACAGTTCCTCTGTTTTGATTCCATCTaGAAATGGAAGCTCCTCCTCGTCTTCTTCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQFSQFLCFDSI*KWKLLLVFFPI Trigger: TATGGGGAAGAAGACGAGGAGGAGCTTCCATTTCAAGATGGAATCAAAACAGAGGAACTGTGAGAACTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | CAGATTTGTTTTCCTGCAAAGAGTGCTAGGCAGACCTaGGGCTGTGAGATTAAAGGAAGCCTTTCCATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QICFPAKSARQT*GCEIKGSLSID Trigger: ATCGATGGAAAGGCTTCCTTTAATCTCACAGCCCAAGGTCTGCCTAGCACTCTTTGCAGGAAAACAAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTGTTTCTGTTGTTCTTaGGAAGTATCCCACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPYFPSLDRLQPHSWSSCCFCCS*EVSHFA Trigger: AGCAAAGTGGGATACTTCTCAAGAACAACAGAAACA...ACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTGGTATCTTCCTCTTATaGTACCATTTTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPYFPSLDRLQPHSWSSCGIFLL*YHFLQV Trigger: AACCTGGAGAAAATGGTATCATAAGAGGAAGATACC...ACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGTAGGGCAGGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTGGTATCTTCCTCTTATaGTACCATTTTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRAGPYFPSLDRLQPHSGIFLL*YHFLQV Trigger: AACCTGGAGAAAATGGTATCATAAGAGGAAGATACC...AGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATGAAAGTTCTGGGACTTCCTTGTTaGACAATACTGGCTGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SPETILLFWLLLRWVMKVLGLPC*TILAET Trigger: CGTTTCAGCCAGTATTGTGCAACAAGGAAGTCCCAG...AACTTTCATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 |
||
| CDS-3UTR CCA 90 bp | ATGTGTTTAGCTAATCATTTGGTGGAGGGTGCAGACCTGCTGTTTTGCTTTTGTGACAAACAGGAAGCTTaGCTCTGGTTCCAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MCLANHLVEGADLLFCFCDKQEA*LWFQVF Trigger: GAAAACCTGGAACCAGAGCCAAGCTTCCTGTTTGTC...ACAAAAGCAAAACAGCAGGTCTGCACCCTCCACCAAATGATTAGCTAAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATGAAAGTTGACAAACAGGAAGCTTaGCTCTGGTTCCAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPETILLFWLLLRWVMKVDKQEA*LWFQVF Trigger: GAAAACCTGGAACCAGAGCCAAGCTTCCTGTTTGTC...AACTTTCATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCTTTTGTCTTATGCCCAGTCTCTTCTTCTTAGTCCCAATTTCTCCCGAGCTGAAACGTCTCTTTaGAAATGGCAAGCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLSYAQSLLLSPNFSRAETSL*KWQATS Trigger: TGATGTGGCTTGCCATTTTCAAAGAGACGTTTCAGC...TCGGGAGAAATTGGGACTAAGAAGAAGAGACTGGGCATAAGACAAAAGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCTTTTGTCTTATGCCCAGTCTCTTCTTCTTAGTCCCAATTTCTCCCGAAGAAGGCTGGAATTTTaGGACAAACAGGAAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLLSYAQSLLLSPNFSRRRLEF*DKQEAW Trigger: CCAAGCTTCCTGTTTGTCTCAAAATTCCAGCCTTCT...TCGGGAGAAATTGGGACTAAGAAGAAGAGACTGGGCATAAGACAAAAGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATTTCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATAGTATCCCACTTTGCTaGCTTGAGGTCGTAATTATG | + |
|
Preference number: 4 (lower is better) Translates to: PNFSRDNSLVLVVAEMGNSIPLC*LEVVIM Trigger: CATAATTACGACCTCAAGCCAGCAAAGTGGGATACT...ATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR TCA 90 bp | CCCAATTTCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATTGTTTCTGTTGTTCTTaGGAAGTATCCCACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNFSRDNSLVLVVAEMGNCFCCS*EVSHFA Trigger: AGCAAAGTGGGATACTTCTCAAGAACAACAGAAACA...ATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATGAAAGTTATATCTTCAGAAGGCTaGAATTTTGAGACAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPETILLFWLLLRWVMKVISSEG*NFETNR Trigger: CCTGTTTGTCTCAAAATTCCAGCCTTCTGAAGATAT...AACTTTCATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
||
| CDS-3UTR CCA 90 bp | AATCATTTGGTGTATAACTTATACCCATGGCTCCAGGAGTCCATCTCCTCACTTATATCTTCAGAAGGCTaGAATTTTGAGACAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NHLVYNLYPWLQESISSLISSEG*NFETNR Trigger: CCTGTTTGTCTCAAAATTCCAGCCTTCTGAAGATAT...AAGTGAGGAGATGGACTCCTGGAGCCATGGGTATAAGTTATACACCAAATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
||
| 3UTR CAA 72 bp | TTCTTCTTAGTCCCAATTTCTCCCGAGACAATTCTCTaGTTCTGGTTGTTGCTGAGATGGGTAATGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFLVPISPETIL*FWLLLRWVMKV Trigger: AACTTTCATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGGACTAAGAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| 3UTR CAA 72 bp | CACATCTACTGTTTATTGATGAGGTCATTGTGCAGGTaGTATATCAGAATTATCCTGTGTTCTCTTATAGCT | + |
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Preference number: 4 (lower is better) Translates to: HIYCLLMRSLCR*YIRIILCSLIA Trigger: AGCTATAAGAGAACACAGGATAATTCTGATATACAACCTGCACAATGACCTCATCAATAAACAGTAGATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| 3UTR CAA 72 bp | ACTGATAACCACATCTACTGTTTATTGATGAGGTCATaGTGCAGGTTGTATATCAGAATTATCCTGTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TDNHIYCLLMRS*CRLYIRIILCS Trigger: AGAACACAGGATAATTCTGATATACAACCTGCACAATGACCTCATCAATAAACAGTAGATGTGGTTATCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGGAAATCAAGGTGCTGAGAGTCTACTGGGCAACACCACCTCCTCCACACAGTAGCCCTCTCTaGAGGAAACTGGGACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: IWEEIKVLRVYWATPPPPHSSPL*RKLGLP Trigger: AGGAAGTCCCAGTTTCCTCAAGAGAGGGCTACTGTG...TGGAGGAGGTGGTGTTGCCCAGTAGACTCTCAGCACCTTGATTTCCTCCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS TCA 90 bp | GTGACATATCCAGTTGTTAGGGCATGGGCCACAGTAGCCCTCTCTTaGGGAAACTGGGACTTCCTTGTTGCACAATACTGGCTGAAACGT | + |
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Preference number: 5 (lower is better) Translates to: VTYPVVRAWATVALS*GNWDFLVAQYWLKR Trigger: ACGTTTCAGCCAGTATTGTGCAACAAGGAAGTCCCAGTTTCCTCAAGAGAGGGCTACTGTGGCCCATGCCCTAACAACTGGATATGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 |
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| CDS-3UTR CAA 90 bp | GACCCTGAGAGGGGAAGTGAGGCAAGAACTGCCAGGAGTGAAAAGACCTCAGGCTTGTTTCTGTTGTTCTaGAGAAGTATCCCACTTTGC | + |
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Preference number: 5 (lower is better) Translates to: DPERGSEARTARSEKTSGLFLLF*RSIPLC Trigger: GCAAAGTGGGATACTTCTCAAGAACAACAGAAACAA...GCCTGAGGTCTTTTCACTCCTGGCAGTTCTTGCCTCACTTCCCCTCTCAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | CCCAATTTCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATCACAGTAGCCCTCTCTaGAGGAAACTGGGACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PNFSRDNSLVLVVAEMGNHSSPL*RKLGLP Trigger: AGGAAGTCCCAGTTTCCTCAAGAGAGGGCTACTGTG...ATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | AGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTCCCTCTTCCCCTGTTTGTTTCTGTTGTTCTaGAGAAGTATCCCACTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SLDRLQPHSWSSCSLFPCLFLLF*RSIPLC Trigger: GCAAAGTGGGATACTTCTCAAGAACAACAGAAACAA...ACAGGGGAAGAGGGAACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | CCAGTAGGGCAGGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTCAGCACAGGATCCTTTaGGTATTTCCACCAGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PVGQDHISLVWIGFNHTLQHRIL*VFPPEL Trigger: TAACTCTGGTGGAAATACCAAAAGGATCCTGTGCTG...AAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCCTGCCCTACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | GGACCATATTTCCCTAGTTTGGATAGGCTTCAACCACACTCTTGGTCCTCCTGTTTGTTTCTGTTGTTCTaGAGAAGTATCCCACTTTGC | + |
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Preference number: 5 (lower is better) Translates to: GPYFPSLDRLQPHSWSSCLFLLF*RSIPLC Trigger: GCAAAGTGGGATACTTCTCAAGAACAACAGAAACAA...ACAGGAGGACCAAGAGTGTGGTTGAAGCCTATCCAAACTAGGGAAATATGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | CCCAATTTCTCCCGAGACAATTCTCTTGTTCTGGTTGTTGCTGAGATGGGTAATCAGCACAGGATCCTTTaGGTATTTCCACCAGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PNFSRDNSLVLVVAEMGNQHRIL*VFPPEL Trigger: TAACTCTGGTGGAAATACCAAAAGGATCCTGTGCTG...ATTACCCATCTCAGCAACAACCAGAACAAGAGAATTGTCTCGGGAGAAATTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS-3UTR CAA 90 bp | GTTTTGCTTTTGTCTTATGCCCAGTCTCTTCTTCTTAGTCCCAATTTCTCCCGACAGCACAGGATCCTTTaGGTATTTCCACCAGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: VLLLSYAQSLLLSPNFSRQHRIL*VFPPEL Trigger: TAACTCTGGTGGAAATACCAAAAGGATCCTGTGCTG...TCGGGAGAAATTGGGACTAAGAAGAAGAGACTGGGCATAAGACAAAAGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS CCA 90 bp | GAATCGAATTGCCAAGGCTATAGCAAGGACTCGAACAACGAACATTaGAGATATTTTGAGTTTTTCTATAGGGTATCTTCCTCTTATGAT | + |
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Preference number: 5 (lower is better) Translates to: ESNCQGYSKDSNNEH*RYFEFFYRVSSSYD Trigger: ATCATAAGAGGAAGATACCCTATAGAAAAACTCAAAATATCTCCAATGTTCGTTGTTCGAGTCCTTGCTATAGCCTTGGCAATTCGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS GCA 72 bp | GAGAGAGGAGCCATCTTCCCACTGCCAGGAGCCATTTaGTGGGATCTGGACCAGTCCCATCCAGTGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: ERGAIFPLPGAI*WDLDQSHPVIG Trigger: TCCTATCACTGGATGGGACTGGTCCAGATCCCAGCAAATGGCTCCTGGCAGTGGGAAGATGGCTCCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS TCA 72 bp | TGGCTTGAGGTCGTAATTATGGCATTTGCTCATCTCTaGGTGATGAGACTTTCGATCACGAATCAATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: WLEVVIMAFAHL*VMRLSITNQCH Trigger: ATGGCATTGATTCGTGATCGAAAGTCTCATCACTCAGAGATGAGCAAATGCCATAATTACGACCTCAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032252.8 |
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| CDS TCA 72 bp | TCTTCTTTACTGTATATCTTCAGAAGGCTGGAATTTTaGGACAAACAGGAAGCTTGGCTCTGGTTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSLLYIFRRLEF*DKQEAWLWFQV Trigger: AACCTGGAACCAGAGCCAAGCTTCCTGTTTGTCTCAAAATTCCAGCCTTCTGAAGATATACAGTAAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS CCA 72 bp | TTGTTTCTGTTGTTCTTGAGAAGTATCCCACTTTGCTaGCTTGAGGTCGTAATTATGGCATTTGCTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: LFLLFLRSIPLC*LEVVIMAFAHL Trigger: GAGATGAGCAAATGCCATAATTACGACCTCAAGCCAGCAAAGTGGGATACTTCTCAAGAACAACAGAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032252.8 |
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| CDS TCA 72 bp | GGGTATCTTCCTCTTATGATACCATTTTCTCCAGGTTaGCTGGTAGTTAGTGCTAATCTTTGTTTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GYLPLMIPFSPG*LVVSANLCFCC Trigger: ACAACAGAAACAAAGATTAGCACTAACTACCAGTCAACCTGGAGAAAATGGTATCATAAGAGGAAGATACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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| CDS TCA 72 bp | TTGTTGCACAATACTGTCAAGATAATTATAACTGGCTaGAACGTCTCTTTGAAAATGGCAAGCCACATCAAT | + |
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Preference number: 6 (lower is better) Translates to: LLHNTVKIIITG*NVSLKMASHIN Trigger: ATTGATGTGGCTTGCCATTTTCAAAGAGACGTTTCAGCCAGTTATAATTATCTTGACAGTATTGTGCAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168919.8 |
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| CDS CAA 72 bp | ATAGCAAGGACTCGAACAACGAACATTGGAGATATTTaGAGTTTTTCTATAGGGTATCTTCCTCTTATGATA | + |
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Preference number: 6 (lower is better) Translates to: IARTRTTNIGDI*SFSIGYLPLMI Trigger: TATCATAAGAGGAAGATACCCTATAGAAAAACTCAAAATATCTCCAATGTTCGTTGTTCGAGTCCTTGCTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032252.8 ENSMUST00000095412.10 ENSMUST00000168919.8 |
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