Pregenerated sensors for KLRI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043932Ensembl transcript IDs: ENSMUST00000050385.6
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACATCAGGCACAATGTAATCCTACACTGTCTGCACAAGTGGGACTaGGATTCAGATAAAGAGGAAATGGTACAAGGCTTGAGCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: NIRHNVILHCLHKWD*DSDKEEMVQGLSPG Trigger: ACCAGGGCTCAAGCCTTGTACCATTTCCTCTTTATCTGAATCCCAGTCCCACTTGTGCAGACAGTGTAGGATTACATTGTGCCTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 90 bp | TGTGAGTTTTTGTGTGTACCATGTGCATGTAGGAGCCCAGGAAGATaGGAAGAGGATGTCAGATCTATAGGAACTAGAGTTACAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: CEFLCVPCACRSPGR*EEDVRSIGTRVTGC Trigger: GCAGCCTGTAACTCTAGTTCCTATAGATCTGACATCCTCTTCTCATCTTCCTGGGCTCCTACATGCACATGGTACACACAAAAACTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR GCA 90 bp | GCCTTTATAACCACAGCTTCAGTGAGTTCAGGAGTTCCACAGCCATaGAATGTCCAGAAGACACTGTGTAAGAACTTCAGTCCTCCATTA | + |
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Preference number: 1 (lower is better) Translates to: AFITTASVSSGVPQP*NVQKTLCKNFSPPL Trigger: TAATGGAGGACTGAAGTTCTTACACAGTGTCTTCTGGACATTGCATGGCTGTGGAACTCCTGAACTCACTGAAGCTGTGGTTATAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CCA 90 bp | TACGCATACTCCAAAATAAAAATCCAGGCCAGTAGCACAGATCAGTaGGTAGCAAACCTTATACAAGTCTGGAGACCTGAGGTTGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: YAYSKIKIQASSTDQ*VANLIQVWRPEVVP Trigger: GGGAACAACCTCAGGTCTCCAGACTTGTATAAGGTTTGCTACCCACTGATCTGTGCTACTGGCCTGGATTTTTATTTTGGAGTATGCGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 90 bp | TGGGTAGCAAACCTTATACAAGTCTGGAGACCTGAGGTTGTTCCCTaGAATCCACATAAGAGTAGAAGAGAACCAATTCCACCAAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: WVANLIQVWRPEVVP*NPHKSRREPIPPSC Trigger: GCAACTTGGTGGAATTGGTTCTCTTCTACTCTTATGTGGATTTCAGGGAACAACCTCAGGTCTCCAGACTTGTATAAGGTTTGCTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 90 bp | GGCTCTCTCATCTGTTCTCTCATCACCATGTCACCTTCAAATGGCTaGAAGTACAGTATTAGCTGCTTTCCAGAAAAGGCAATGCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: GSLICSLITMSPSNG*KYSISCFPEKAMPY Trigger: GTAAGGCATTGCCTTTTCTGGAAAGCAGCTAATACTGTACTTTCAGCCATTTGAAGGTGACATGGTGATGAGAGAACAGATGAGAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CCA 90 bp | CCTTGTATAGTCATCACCAGCATCACCATTGTTATTTTATGTGTATaGGCCGTTGGCTGTGTCTTTACCATGTGTGTGCCCTCTGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: PCIVITSITIVILCV*AVGCVFTMCVPSEN Trigger: GTTTTCAGAGGGCACACACATGGTAAAGACACAGCCAACGGCCCATACACATAAAATAACAATGGTGATGCTGGTGATGACTATACAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CCA 90 bp | GTCCAGAAGACACTGTGTAAGAACTTCAGTCCTCCATTATGGTCATaGACTCTTTTGTTTGTTTGCTATATTACTTTGCTTCAAAGCACC | + |
|
Preference number: 1 (lower is better) Translates to: VQKTLCKNFSPPLWS*TLLFVCYITLLQST Trigger: GGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTGAAGTTCTTACACAGTGTCTTCTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 90 bp | CAAATTCATGTGTTTCACATATATACAAACACATTAAACCAGGAGTaGGCCTTTATAACCACAGCTTCAGTGAGTTCAGGAGTTCCACAG | + |
|
Preference number: 1 (lower is better) Translates to: QIHVFHIYTNTLNQE*AFITTASVSSGVPQ Trigger: CTGTGGAACTCCTGAACTCACTGAAGCTGTGGTTATAAAGGCTCACTCCTGGTTTAATGTGTTTGTATATATGTGAAACACATGAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGTATGGGCCGTTGGCTGTGTCTTTACCATGTGTGTGCCCTCTGAAAACATAAGCCCTCGCTGGGACTaGGCTCCAGGCTCTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: CVWAVGCVFTMCVPSENISPRWD*APGSKL Trigger: AAGCTTAGAGCCTGGAGCTCAGTCCCAGCGAGGGCT...TATGTTTTCAGAGGGCACACACATGGTAAAGACACAGCCAACGGCCCATACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCACAGCCATGCAATGTCCAGAAGACACTGTGTAAGAACTTCAGTCCTCCATAGGAGCCCAGGAAGATaGGAAGAGGATGTCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: FHSHAMSRRHCVRTSVLHRSPGR*EEDVRS Trigger: AGATCTGACATCCTCTTCTCATCTTCCTGGGCTCCT...ATGGAGGACTGAAGTTCTTACACAGTGTCTTCTGGACATTGCATGGCTGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGTATGATGTATCAGTTTCTTCAGTGGTGTGGCTATGGGGAAGTTGCCTACAGCATGACAATTTTTaGGTCATACCTTCTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LGYDVSVSSVVWLWGSCLQHDNF*VIPSPV Trigger: AACTGGAGAAGGTATGACTCAAAAATTGTCATGCTG...TAGGCAACTTCCCCATAGCCACACCACTGAAGAAACTGATACATCATACCCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGTATGATGTATCAGTTTCTTCAGTGGTGTGGCTATGGGGAAGTTGCCTATCCTTTATTAGCTGTTaGCCAAGAGCAGTTCATATC | + |
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Preference number: 2 (lower is better) Translates to: LGYDVSVSSVVWLWGSCLSFISC*PRAVHI Trigger: GATATGAACTGCTCTTGGTCAACAGCTAATAAAGGA...TAGGCAACTTCCCCATAGCCACACCACTGAAGAAACTGATACATCATACCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CCA 90 bp | TCACCAGCATCACCATTGTTATTTTATGTGTATGGGCCGTTGGCTGTGTCTTTAGTAGGAATATTACACTaGGTGAGGCTGTATCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SPASPLLFYVYGPLAVSLVGILH*VRLYLW Trigger: CCAGAGATACAGCCTCACCCAGTGTAATATTCCTAC...TAAAGACACAGCCAACGGCCCATACACATAAAATAACAATGGTGATGCTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTAGAAAGGTAAGCAAGGACAAAATAGAGTCAGGAGAATATGGTATGAATCCTGAGGTTGTTCCCTaGAATCCACATAAGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VGRKVSKDKIESGEYGMNPEVVP*NPHKSR Trigger: TCTACTCTTATGTGGATTTCAGGGAACAACCTCAGG...ATTCATACCATATTCTCCTGACTCTATTTTGTCCTTGCTTACCTTTCTACCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTCACATATATACAAACACATTAAACCAGGAGTGAGCCTTTATAACCACAGCTTACAGGCTGCTTTTTaGGATGGCAAATGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VSHIYKHIKPGVSLYNHSLQAAF*DGKWVL Trigger: CAGCACCCATTTGCCATCTCAAAAAGCAGCCTGTAA...GCTGTGGTTATAAAGGCTCACTCCTGGTTTAATGTGTTTGTATATATGTGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR GCA 90 bp | TCACCAGCATCACCATTGTTATTTTATGTGTATGGGCCGTTGGCTGTGTCTTTACTAGATCTGCTGAGATaGAAAACTAGTTTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SPASPLLFYVYGPLAVSLLDLLR*KTSLSS Trigger: AGAGCTCAAACTAGTTTTGCATCTCAGCAGATCTAG...TAAAGACACAGCCAACGGCCCATACACATAAAATAACAATGGTGATGCTGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTCACATATATACAAACACATTAAACCAGGAGTGAGCCTTTATAACCACAGCGGCTGCTTTTTGAGATaGCAAATGGGTGCTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: VSHIYKHIKPGVSLYNHSGCFLR*QMGAGN Trigger: ATTCCCAGCACCCATTTGCCATCTCAAAAAGCAGCC...GCTGTGGTTATAAAGGCTCACTCCTGGTTTAATGTGTTTGTATATATGTGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 90 bp | TTAGCACAAGAATTGTGTTTTCCCATGATGGTTTTTGTTCCTTTCTaGGCTCTCTCATCTGTTCTCTCATCACCATGTCACCTTCAAATG | + |
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Preference number: 2 (lower is better) Translates to: LAQELCFPMMVFVPF*ALSSVLSSPCHLQM Trigger: CATTTGAAGGTGACATGGTGATGAGAGAACAGATGAGAGAGCCAAGAAAGGAACAAAAACCATCATGGGAAAACACAATTCTTGTGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTCACATATATACAAACACATTAAACCAGGAGTGAGCCTTTATAACCACAGCGAATATTACACTGGGTaGGGCTGTATCTCTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: VSHIYKHIKPGVSLYNHSEYYTG*GCISGL Trigger: TAGACCAGAGATACAGCCTCACCCAGTGTAATATTC...GCTGTGGTTATAAAGGCTCACTCCTGGTTTAATGTGTTTGTATATATGTGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 90 bp | CCTCCATTATGGTCATGGACTCTTTTGTTTGTTTGCTATATTACTTaGCTTCAAAGCACCCAGTGTTTGTTGGCTCAAATCAAAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PPLWSWTLLFVCYIT*LQSTQCLLAQIKSL Trigger: CAGACTTTTGATTTGAGCCAACAAACACTGGGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 90 bp | TGTGTAAGAACTTCAGTCCTCCATTATGGTCATGGACTCTTTTGTTaGTTTGCTATATTACTTTGCTTCAAAGCACCCAGTGTTTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: CVRTSVLHYGHGLFC*FAILLCFKAPSVCW Trigger: CCAACAAACACTGGGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTGAAGTTCTTACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 90 bp | ACACTGTGTAAGAACTTCAGTCCTCCATTATGGTCATGGACTCTTTaGTTTGTTTGCTATATTACTTTGCTTCAAAGCACCCAGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: TLCKNFSPPLWSWTL*FVCYITLLQSTQCL Trigger: CAAACACTGGGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTGAAGTTCTTACACAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAGTCCTCCATTATGGTCATGGACTCTTTTGTTTGTTTGCTATATTACTTTCATTGTTGGCCTTTTaGCTAAGATTCAGAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: TSVLHYGHGLFCLFAILLSLLAF*LRFRVT Trigger: TGTTACTCTGAATCTTAGTCAAAAGGCCAACAATGA...AAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTGAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | CGAGTGCACTCTATACCTCAAAGCCCTCGCTGGGACTaGGCTCCAGGCTCTAAGCTTCTTAACTATTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: RVHSIPQSPRWD*APGSKLLNYFN Trigger: GTTGAAATAGTTAAGAAGCTTAGAGCCTGGAGCTCAGTCCCAGCGAGGGCTTTGAGGTATAGAGTGCACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | GGCCGTTGGCTGTGTCTTTACCATGTGTGTGCCCTCTaGAAACATAGAGAACATTGGATTCGGTGGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: GRWLCLYHVCAL*KHREHWIRWNW Trigger: CCAGTTCCACCGAATCCAATGTTCTCTATGTTTTCAGAGGGCACACACATGGTAAAGACACAGCCAACGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | TTCAGCCACAATGGCCTTTCCCCCTTGGTCACTAATTaGGAAAATGCCTTACAGCTGGATCTCGTGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FSHNGLSPLVTN*ENALQLDLVEA Trigger: TGCCTCCACGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGACCAAGGGGGAAAGGCCATTGTGGCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR GCA 72 bp | CCACATAAGAGTAGAAGAGAACCAATTCCACCAAGTTaGCCTTTGACCTCCACATGCTCTGTAGAGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PHKSRREPIPPS*PLTSTCSVESL Trigger: CAGGGACTCTACAGAGCATGTGGAGGTCAAAGGGCAACTTGGTGGAATTGGTTCTCTTCTACTCTTATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | ACTGGGATTCAGATAAAGAGGAAATGGTACAAGGCTTaGGCCCTGGTTCTCCATCTACCTAATGCTGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TGIQIKRKWYKA*ALVLHLPNAGN Trigger: GTTCCCAGCATTAGGTAGATGGAGAACCAGGGCTCAAGCCTTGTACCATTTCCTCTTTATCTGAATCCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR GCA 72 bp | ACCACAGCTTCAGTGAGTTCAGGAGTTCCACAGCCATaGAATGTCCAGAAGACACTGTGTAAGAACTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: TTASVSSGVPQP*NVQKTLCKNFS Trigger: ACTGAAGTTCTTACACAGTGTCTTCTGGACATTGCATGGCTGTGGAACTCCTGAACTCACTGAAGCTGTGGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CAA 90 bp | TCACCAGCATCACCATTGTTATTTTATGTGTATGGGCCGTTGGCTGTGTCTTTATCTGGAGACCTGAGGTaGTTCCCTGAAATCCACATA | + |
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Preference number: 3 (lower is better) Translates to: SPASPLLFYVYGPLAVSLSGDLR*FPEIHI Trigger: TATGTGGATTTCAGGGAACAACCTCAGGTCTCCAGA...TAAAGACACAGCCAACGGCCCATACACATAAAATAACAATGGTGATGCTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CAA 90 bp | CTAGGGTATGATGTATCAGTTTCTTCAGTGGTGTGGCTATGGGGAAGTTGCCTACAAAGCACCCAGTGTTaGTTGGCTCAAATCAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: LGYDVSVSSVVWLWGSCLQSTQC*LAQIKS Trigger: ACTTTTGATTTGAGCCAACAAACACTGGGTGCTTTG...TAGGCAACTTCCCCATAGCCACACCACTGAAGAAACTGATACATCATACCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | TTGTGTGTACCATGTGCATGTAGGAGCCCAGGAAGATaGGAAGAGGATGTCAGATCTATAGGAACTAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: LCVPCACRSPGR*EEDVRSIGTRV Trigger: AACTCTAGTTCCTATAGATCTGACATCCTCTTCTCATCTTCCTGGGCTCCTACATGCACATGGTACACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR GCA 72 bp | GAACCAATTCCACCAAGTTGCCCTTTGACCTCCACATaGTCTGTAGAGTCCCTGTTTCTTATACATGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: EPIPPSCPLTST*SVESLFLIHEK Trigger: CTTTTCATGTATAAGAAACAGGGACTCTACAGAGCATGTGGAGGTCAAAGGGCAACTTGGTGGAATTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CCA 72 bp | TCCAAAATAAAAATCCAGGCCAGTAGCACAGATCAGTaGGTAGCAAACCTTATACAAGTCTGGAGACCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SKIKIQASSTDQ*VANLIQVWRPE Trigger: CTCAGGTCTCCAGACTTGTATAAGGTTTGCTACCCACTGATCTGTGCTACTGGCCTGGATTTTTATTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CCA 72 bp | CACAATGTAATCCTACACTGTCTGCACAAGTGGGACTaGGATTCAGATAAAGAGGAAATGGTACAAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: HNVILHCLHKWD*DSDKEEMVQGL Trigger: CAAGCCTTGTACCATTTCCTCTTTATCTGAATCCCAGTCCCACTTGTGCAGACAGTGTAGGATTACATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CAA 90 bp | CTAGGGTATGATGTATCAGTTTCTTCAGTGGTGTGGCTATGGGGAAGTTGCCTAGAGAACTGCTCACCATaGCTTCTTCAAAGATTTGAA | + |
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Preference number: 3 (lower is better) Translates to: LGYDVSVSSVVWLWGSCLENCSP*LLQRFE Trigger: TTCAAATCTTTGAAGAAGCAATGGTGAGCAGTTCTC...TAGGCAACTTCCCCATAGCCACACCACTGAAGAAACTGATACATCATACCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CCA 72 bp | ATCAGGCACAATGTAATCCTACACTGTCTGCACAAGTaGGACTGGGATTCAGATAAAGAGGAAATGGTACAA | + |
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Preference number: 3 (lower is better) Translates to: IRHNVILHCLHK*DWDSDKEEMVQ Trigger: TTGTACCATTTCCTCTTTATCTGAATCCCAGTCCCACTTGTGCAGACAGTGTAGGATTACATTGTGCCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | AACCTTATACAAGTCTGGAGACCTGAGGTTGTTCCCTaGAATCCACATAAGAGTAGAAGAGAACCAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: NLIQVWRPEVVP*NPHKSRREPIP Trigger: TGGAATTGGTTCTCTTCTACTCTTATGTGGATTTCAGGGAACAACCTCAGGTCTCCAGACTTGTATAAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | ATCTGTTCTCTCATCACCATGTCACCTTCAAATGGCTaGAAGTACAGTATTAGCTGCTTTCCAGAAAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: ICSLITMSPSNG*KYSISCFPEKA Trigger: TGCCTTTTCTGGAAAGCAGCTAATACTGTACTTTCAGCCATTTGAAGGTGACATGGTGATGAGAGAACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTAGAAAGGTAAGCAAGGACAAAATAGAGTCAGGAGAATATGGTATGAATTGCAGTTGTGAGTTTTaGTGTGTACCATGTGCATGT | + |
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Preference number: 3 (lower is better) Translates to: VGRKVSKDKIESGEYGMNCSCEF*CVPCAC Trigger: ACATGCACATGGTACACACAAAAACTCACAACTGCA...ATTCATACCATATTCTCCTGACTCTATTTTGTCCTTGCTTACCTTTCTACCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR GCA 72 bp | GAAAGTACAGTATTAGCTGCTTTCCAGAAAAGGCAATaGCTTACAATTGTGGCCAGACTGAGTTTCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: ESTVLAAFQKRQ*LTIVARLSFFF Trigger: GAAAAAGAAACTCAGTCTGGCCACAATTGTAAGGCATTGCCTTTTCTGGAAAGCAGCTAATACTGTACTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR-3UTR CAA 90 bp | CCGTTCTTGCTATTTCAAGCAGAATCATCAATATGTCTTTTGAACAATCTCCAGAGATGCAAAACTAGTTaGAGCTCTGGGAATACAGAC | + |
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Preference number: 3 (lower is better) Translates to: PFLLFQAESSICLLNNLQRCKTS*SSGNTD Trigger: GTCTGTATTCCCAGAGCTCAAACTAGTTTTGCATCT...CTGGAGATTGTTCAAAAGACATATTGATGATTCTGCTTGAAATAGCAAGAACGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | GTGTTTCACATATATACAAACACATTAAACCAGGAGTaGGCCTTTATAACCACAGCTTCAGTGAGTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: VFHIYTNTLNQE*AFITTASVSSG Trigger: TCCTGAACTCACTGAAGCTGTGGTTATAAAGGCTCACTCCTGGTTTAATGTGTTTGTATATATGTGAAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR GCA 72 bp | AGTCCTCCATTATGGTCATGGACTCTTTTGTTTGTTTaGTATATTACTTTGCTTCAAAGCACCCAGTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: SPPLWSWTLLFV*YITLLQSTQCL Trigger: CAAACACTGGGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR TCA 72 bp | TCTTGCTATTTCAAGCAGAATCATCAATATGTCTTTTaGACAATCTCCAGAGATAGCTGCCCAGTAGGAATA | + |
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Preference number: 3 (lower is better) Translates to: SCYFKQNHQYVF*TISRDSCPVGI Trigger: TATTCCTACTGGGCAGCTATCTCTGGAGATTGTTCAAAAGACATATTGATGATTCTGCTTGAAATAGCAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 72 bp | TTAGCCCTGGTGAGAGACTTCCTTAGACCTGTCATCTaGAATGGCAATGCCCTCATGAAGCCTCACATCTTA | + |
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Preference number: 4 (lower is better) Translates to: LALVRDFLRPVI*NGNALMKPHIL Trigger: TAAGATGTGAGGCTTCATGAGGGCATTGCCATTCAAGATGACAGGTCTAAGGAAGTCTCTCACCAGGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR GCA 90 bp | ATCTCCAGAGATAGCTGCCCAGTAGGAATATTACACTGGGTGAGGCTGTATCTCATGACAGTTATCATTTaGCATGTTGTCAGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ISRDSCPVGILHWVRLYLMTVII*HVVSQG Trigger: TCCCTGGCTGACAACATGGCAAATGATAACTGTCAT...GAGATACAGCCTCACCCAGTGTAATATTCCTACTGGGCAGCTATCTCTGGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CCA 90 bp | GCTGAAAGTACAGTATTAGCTGCTTTCCAGAAAAGGCAATGCCTTACAATTGTGCATCGAATCCTGTCCTaGGCTGGGGGTGGAATATTC | + |
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Preference number: 4 (lower is better) Translates to: AESTVLAAFQKRQCLTIVHRILS*AGGGIF Trigger: GAATATTCCACCCCCAGCCCAGGACAGGATTCGATG...CACAATTGTAAGGCATTGCCTTTTCTGGAAAGCAGCTAATACTGTACTTTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 72 bp | CCAGCATCACCATTGTTATTTTATGTGTATGGGCCGTaGGCTGTGTCTTTACCATGTGTGTGCCCTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: PASPLLFYVYGP*AVSLPCVCPLK Trigger: TTTCAGAGGGCACACACATGGTAAAGACACAGCCAACGGCCCATACACATAAAATAACAATGGTGATGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCAGAGATAGCTGCCCAGTAGGAATATTACACTGGGTGAGGCTGTATCTCAACATTCATCAGGCATaGATATGTTTCCACGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ISRDSCPVGILHWVRLYLNIHQA*ICFHAD Trigger: ATCTGCGTGGAAACATATTCATGCCTGATGAATGTT...GAGATACAGCCTCACCCAGTGTAATATTCCTACTGGGCAGCTATCTCTGGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR TCA 90 bp | TTCCACAGCCATGCAATGTCCAGAAGACACTGTGTAAGAACTTCAGTCCTCCATGTATGTTTTCTTAGCTaGACATTCATCAGGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: FHSHAMSRRHCVRTSVLHVCFLS*TFIRHE Trigger: TTCATGCCTGATGAATGTTCAGCTAAGAAAACATAC...ATGGAGGACTGAAGTTCTTACACAGTGTCTTCTGGACATTGCATGGCTGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CCA 90 bp | GGACAAAATAGAGTCAGGAGAATATGGTATGAATATTGTATGGTGGTGGTCACTCATTTCCCCACAACCTaGAACTGTTGGTTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GQNRVRRIWYEYCMVVVTHFPTT*NCWFHP Trigger: TGGATGGAACCAACAGTTCCAGGTTGTGGGGAAATG...AGTGACCACCACCATACAATATTCATACCATATTCTCCTGACTCTATTTTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR TCA 90 bp | TCACCAGCATCACCATTGTTATTTTATGTGTATGGGCCGTTGGCTGTGTCTTTAGGTCTCTGCTTTTCTTaGAATGTGGGAGATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SPASPLLFYVYGPLAVSLGLCFS*NVGDFV Trigger: AACAAAATCTCCCACATTTCAAGAAAAGCAGAGACC...TAAAGACACAGCCAACGGCCCATACACATAAAATAACAATGGTGATGCTGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR TCA 90 bp | TTGACCTCCACATGCTCTGTAGAGTCCCTGTTTCTTATACATGAAAAGTACACATCTATGATCACAAGATaGGAATTCAGCTCCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: LTSTCSVESLFLIHEKYTSMITR*EFSSSH Trigger: GTGTGAGGAGCTGAATTCTCATCTTGTGATCATAGA...TGTGTACTTTTCATGTATAAGAAACAGGGACTCTACAGAGCATGTGGAGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CCA 90 bp | CTAGGGTATGATGTATCAGTTTCTTCAGTGGTGTGGCTATGGGGAAGTTGCCTAGCTTTTCTTGAAATGTaGGAGATTTTGTTCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: LGYDVSVSSVVWLWGSCLAFLEM*EILFLC Trigger: ACATAGGAACAAAATCTCCCACATTTCAAGAAAAGC...TAGGCAACTTCCCCATAGCCACACCACTGAAGAAACTGATACATCATACCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CCA 90 bp | GGACAAAATAGAGTCAGGAGAATATGGTATGAATATTGTATGGTGGTGGTCACTAAGCAATCCAGTCACTaGAACAAAAATCACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GQNRVRRIWYEYCMVVVTKQSSH*NKNHRR Trigger: CCTCCTGTGATTTTTGTTCCAGTGACTGGATTGCTT...AGTGACCACCACCATACAATATTCATACCATATTCTCCTGACTCTATTTTGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 72 bp | CAGTCCTCCATTATGGTCATGGACTCTTTTGTTTGTTaGCTATATTACTTTGCTTCAAAGCACCCAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: QSSIMVMDSFVC*LYYFASKHPVF Trigger: AAACACTGGGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 72 bp | ACTTCAGTCCTCCATTATGGTCATGGACTCTTTTGTTaGTTTGCTATATTACTTTGCTTCAAAGCACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TSVLHYGHGLFC*FAILLCFKAPS Trigger: ACTGGGTGCTTTGAAGCAAAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR TCA 90 bp | GGACAAAATAGAGTCAGGAGAATATGGTATGAATATTGTATGGTGGTGGTCACTATAACGTTGCTAAGATaGCAGTTATCATTTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GQNRVRRIWYEYCMVVVTITLLR*QLSFAM Trigger: CATGGCAAATGATAACTGTCATCTTAGCAACGTTAT...AGTGACCACCACCATACAATATTCATACCATATTCTCCTGACTCTATTTTGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR TCA 90 bp | ACTTCAGTCCTCCATTATGGTCATGGACTCTTTTGTTTGTTTGCTATATTACTTGGGTGGAATATTCTGTaGACTTTCAGTTCCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TSVLHYGHGLFCLFAILLGWNIL*TFSSCF Trigger: AAAACAGGAACTGAAAGTTCACAGAATATTCCACCC...AAGTAATATAGCAAACAAACAAAAGAGTCCATGACCATAATGGAGGACTGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| 3UTR CAA 72 bp | GTTTGCTATATTACTTTGCTTCAAAGCACCCAGTGTTaGTTGGCTCAAATCAAAAGTCTGAAGAGGTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: VCYITLLQSTQC*LAQIKSLKRFL Trigger: TAAAAACCTCTTCAGACTTTTGATTTGAGCCAACAAACACTGGGTGCTTTGAAGCAAAGTAATATAGCAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS CCA 90 bp | TTGTCAGCCAGGGATCTATTCCTTTGCCCACATCGAATCCTGTCCTaGGCTGGGGGTGGAATATTCTGTGAACTTTCAGTTCCTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: LSARDLFLCPHRILS*AGGGIFCELSVPVF Trigger: AAAAACAGGAACTGAAAGTTCACAGAATATTCCACCCCCAGCCCAGGACAGGATTCGATGTGGGCAAAGGAATAGATCCCTGGCTGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CAA 90 bp | CTAGGGTATGATGTATCAGTTTCTTCAGTGGTGTGGCTATGGGGAAGTTGCCTAGGGTCTCTGCTTTTCTaGAAATGTGGGAGATTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LGYDVSVSSVVWLWGSCLGSLLF*KCGRFC Trigger: ACAAAATCTCCCACATTTCAAGAAAAGCAGAGACCC...TAGGCAACTTCCCCATAGCCACACCACTGAAGAAACTGATACATCATACCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CAA 90 bp | GTGGGTAGAAAGGTAAGCAAGGACAAAATAGAGTCAGGAGAATATGGTATGAATGATGACAGTTATCATTaGCCATGTTGTCAGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VGRKVSKDKIESGEYGMNDDSYH*PCCQPG Trigger: CCCTGGCTGACAACATGGCAAATGATAACTGTCATC...ATTCATACCATATTCTCCTGACTCTATTTTGTCCTTGCTTACCTTTCTACCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS GCA 90 bp | GTGACCAAAATAATGCATAACGTTGCTAAGATGACAGTTATCATTTaGCATGTTGTCAGCCAGGGATCTATTCCTTTGCCCACATCGAAT | + |
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Preference number: 5 (lower is better) Translates to: VTKIMHNVAKMTVII*HVVSQGSIPLPTSN Trigger: ATTCGATGTGGGCAAAGGAATAGATCCCTGGCTGACAACATGGCAAATGATAACTGTCATCTTAGCAACGTTATGCATTATTTTGGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS-3UTR CAA 90 bp | GTTTCACATATATACAAACACATTAAACCAGGAGTGAGCCTTTATAACCACAGCTTATCATTTGCCATGTaGTCAGCCAGGGATCTATTC | + |
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Preference number: 5 (lower is better) Translates to: VSHIYKHIKPGVSLYNHSLSFAM*SARDLF Trigger: GAATAGATCCCTGGCTGACAACATGGCAAATGATAA...GCTGTGGTTATAAAGGCTCACTCCTGGTTTAATGTGTTTGTATATATGTGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS CAA 72 bp | ATCATTTGCCATGTTGTCAGCCAGGGATCTATTCCTTaGCCCACATCGAATCCTGTCCTGGGCTGGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: IICHVVSQGSIP*PTSNPVLGWGW Trigger: CCACCCCCAGCCCAGGACAGGATTCGATGTGGGCAAAGGAATAGATCCCTGGCTGACAACATGGCAAATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS CCA 72 bp | AGGGATCTATTCCTTTGCCCACATCGAATCCTGTCCTaGGCTGGGGGTGGAATATTCTGTGAACTTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RDLFLCPHRILS*AGGGIFCELSV Trigger: AACTGAAAGTTCACAGAATATTCCACCCCCAGCCCAGGACAGGATTCGATGTGGGCAAAGGAATAGATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS TCA 72 bp | ACAATAACAAATTTTCCACCTCTGCTTTGGAGTCTATaGTCACAAGATGAGAATTCAGCTCCTCACACGCAG | + |
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Preference number: 6 (lower is better) Translates to: TITNFPPLLWSL*SQDENSAPHTQ Trigger: CTGCGTGTGAGGAGCTGAATTCTCATCTTGTGATCATAGACTCCAAAGCAGAGGTGGAAAATTTGTTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS GCA 72 bp | ATAATGCATAACGTTGCTAAGATGACAGTTATCATTTaGCATGTTGTCAGCCAGGGATCTATTCCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: IMHNVAKMTVII*HVVSQGSIPLP Trigger: GGGCAAAGGAATAGATCCCTGGCTGACAACATGGCAAATGATAACTGTCATCTTAGCAACGTTATGCATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS TCA 72 bp | GATCTCTGGTCTGTCTTCGAGGGTCTCTGCTTTTCTTaGAATGTGGGAGATTTTGTTCCTATGTTAATAATC | + |
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Preference number: 6 (lower is better) Translates to: DLWSVFEGLCFS*NVGDFVPMLII Trigger: GATTATTAACATAGGAACAAAATCTCCCACATTTCAAGAAAAGCAGAGACCCTCGAAGACAGACCAGAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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| CDS CAA 72 bp | AGATCTCTGGTCTGTCTTCGAGGGTCTCTGCTTTTCTaGAAATGTGGGAGATTTTGTTCCTATGTTAATAAT | + |
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Preference number: 6 (lower is better) Translates to: RSLVCLRGSLLF*KCGRFCSYVNN Trigger: ATTATTAACATAGGAACAAAATCTCCCACATTTCAAGAAAAGCAGAGACCCTCGAAGACAGACCAGAGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050385.6 |
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