RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLRI1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067610

Ensembl transcript IDs: ENSMUST00000088046.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGCTCTCCATATTTTAGCTGCTCTTCACATAGCACTACAGGGCTCTaGTTGACTGTAGGTATTCTGTGCTTCCATGGAGACTTACATGTC +
Preference number: 5 (lower is better)
Translates to: SSPYFSCSSHSTTGL*LTVGILCFHGDLHV
Trigger: GACATGTAAGTCTCCATGGAAGCACAGAATACCTACAGTCAAGCAGAGCCCTGTAGTGCTATGTGAAGAGCAGCTAAAATATGGAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS GCA 90 bp TCTTCACATAGCACTACAGGGCTCTGCTTGACTGTAGGTATTCTGTaGTTCCATGGAGACTTACATGTCTTCAACTCTGTGTATGTAACA +
Preference number: 5 (lower is better)
Translates to: SSHSTTGLCLTVGIL*FHGDLHVFNSVYVT
Trigger: TGTTACATACACAGAGTTGAAGACATGTAAGTCTCCATGGAAGCACAGAATACCTACAGTCAAGCAGAGCCCTGTAGTGCTATGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS GCA 72 bp TGGTTGTCATCAGCACCACACACAAGGCTCCAAGCATaGCAGTTACCACTCTCCATACTGTTGATTTGGGGC +
Preference number: 6 (lower is better)
Translates to: WLSSAPHTRLQA*QLPLSILLIWG
Trigger: GCCCCAAATCAACAGTATGGAGAGTGGTAACTGGCATGCTTGGAGCCTTGTGTGTGGTGCTGATGACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS GCA 72 bp AGCACTACAGGGCTCTGCTTGACTGTAGGTATTCTGTaGTTCCATGGAGACTTACATGTCTTCAACTCTGTG +
Preference number: 6 (lower is better)
Translates to: STTGLCLTVGIL*FHGDLHVFNSV
Trigger: CACAGAGTTGAAGACATGTAAGTCTCCATGGAAGCACAGAATACCTACAGTCAAGCAGAGCCCTGTAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS GCA 72 bp GGTGTTCTGTGGAATGTCAGCTCTCCATATTTTAGCTaGTCTTCACATAGCACTACAGGGCTCTGCTTGACT +
Preference number: 6 (lower is better)
Translates to: GVLWNVSSPYFS*SSHSTTGLCLT
Trigger: AGTCAAGCAGAGCCCTGTAGTGCTATGTGAAGAGCAGCTAAAATATGGAGAGCTGACATTCCACAGAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS CAA 72 bp AGTCACTGGAACAAAGATCACAGGAGGCGTCATCCTTaGGACACCGAAGAGGATGAAGTGATGTTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: SHWNKDHRRRHP*DTEEDEVMFFC
Trigger: GCAGAAAAACATCACTTCATCCTCTTCGGTGTCCAAAGGATGACGCCTCCTGTGATCTTTGTTCCAGTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS CAA 90 bp TCTCCATATTTTAGCTGCTCTTCACATAGCACTACAGGGCTCTGCTaGACTGTAGGTATTCTGTGCTTCCATGGAGACTTACATGTCTTC +
Preference number: 6 (lower is better)
Translates to: SPYFSCSSHSTTGLC*TVGILCFHGDLHVF
Trigger: GAAGACATGTAAGTCTCCATGGAAGCACAGAATACCTACAGTCAAGCAGAGCCCTGTAGTGCTATGTGAAGAGCAGCTAAAATATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS TCA 72 bp GGAGGCGTCATCCTTTGGACACCGAAGAGGATGAAGTaGTGTTTTTCTGCATTGCTCTTCTTGACTAGAAAA +
Preference number: 6 (lower is better)
Translates to: GGVILWTPKRMK*CFSALLFLTRK
Trigger: TTTTCTAGTCAAGAAGAGCAATGCAGAAAAACATCACTTCATCCTCTTCGGTGTCCAAAGGATGACGCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS CCA 72 bp AGGGCTCTGCTTGACTGTAGGTATTCTGTGCTTCCATaGAGACTTACATGTCTTCAACTCTGTGTATGTAAC +
Preference number: 6 (lower is better)
Translates to: RALLDCRYSVLP*RLTCLQLCVCN
Trigger: GTTACATACACAGAGTTGAAGACATGTAAGTCTCCATGGAAGCACAGAATACCTACAGTCAAGCAGAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS CAA 72 bp CCAAGCATGCCAGTTACCACTCTCCATACTGTTGATTaGGGGCCTTGTCTTTTTCTTCCCATAGCTTGTTTT +
Preference number: 6 (lower is better)
Translates to: PSMPVTTLHTVD*GPCLFLPIACF
Trigger: AAAACAAGCTATGGGAAGAAAAAGACAAGGCCCCAAATCAACAGTATGGAGAGTGGTAACTGGCATGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS CCA 72 bp CACAATAGAAATTGTTTCCAAAAGCAATCCAGTCACTaGAACAAAGATCACAGGAGGCGTCATCCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: HNRNCFQKQSSH*NKDHRRRHPLD
Trigger: GTCCAAAGGATGACGCCTCCTGTGATCTTTGTTCCAGTGACTGGATTGCTTTTGGAAACAATTTCTATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2
CDS TCA 72 bp ACAATAACAAATTTTCCACCTCTGCTTTGGAGTCTATaGTCACAAGATGAGAATTCAGCTCCTCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: TITNFPPLLWSL*SQDENSAPHRQ
Trigger: CTGCCTGTGAGGAGCTGAATTCTCATCTTGTGATCATAGACTCCAAAGCAGAGGTGGAAAATTTGTTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088046.2