Pregenerated sensors for KLRH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071158Ensembl transcript IDs: ENSMUST00000095409.3, ENSMUST00000118532.8
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAAGGGACCACATCCAAAGACCTTCTATGTCTGTGCAATTCATTaGAAAAATACAACTTTAATCCCTTGGACTGGAATACAGACATGC | + |
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Preference number: 1 (lower is better) Translates to: GKGPHPKTFYVCAIH*KNTTLIPWTGIQTC Trigger: GCATGTCTGTATTCCAGTCCAAGGGATTAAAGTTGTATTTTTCCAATGAATTGCACAGACATAGAAGGTCTTTGGATGTGGTCCCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR TCA 90 bp | AGGAGCAGAGAAAGTGATGAATCAGAGAATCTATCATATAAAATATaGCAGAATGAGTCACAGATAAGTTATAGCCAACTCACATGGGAA | + |
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Preference number: 1 (lower is better) Translates to: RSRESDESENLSYKI*QNESQISYSQLTWE Trigger: TTCCCATGTGAGTTGGCTATAACTTATCTGTGACTCATTCTGTCATATTTTATATGATAGATTCTCTGATTCATCACTTTCTCTGCTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAATGAGTCACAGATAAGTTATAGCCAACTCACATGGGAAGAGCACAGCAGAAAGCCAAAGTTAGTATaGAGCCAAGTGGAGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: QNESQISYSQLTWEEHSRKPKLV*SQVEQF Trigger: GAATTGCTCCACTTGGCTTCATACTAACTTTGGCTT...TCTGCTGTGCTCTTCCCATGTGAGTTGGCTATAACTTATCTGTGACTCATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAAAAGATTGGAACATATTGCCAAAGCCAAAGTTAGTATGAAGCCAAGTAGAAATAAAACGCTCTaGGCTCAGCACAAGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: GTKRLEHIAKAKVSMKPSRNKTL*AQHKPC Trigger: GCATGGCTTGTGCTGAGCCCAGAGCGTTTTATTTCT...ACTTGGCTTCATACTAACTTTGGCTTTGGCAATATGTTCCAATCTTTTGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCACATCCAAAGACCTTCTATGTCTGTGCAATTCATTGGAAAAATACAACTCAAGAGATGCTGGATTaGATCAGTCAGCTTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GPHPKTFYVCAIHWKNTTQEMLD*ISQLGR Trigger: TCTTCCAAGCTGACTGATTCAATCCAGCATCTCTTG...AGTTGTATTTTTCCAATGAATTGCACAGACATAGAAGGTCTTTGGATGTGGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR GCA 90 bp | TTAATCCAGCAACATAGATATTGTGGAAAGGGACCACATCCAAAGACCTTCTATTCAGAAGCCAAGAGATaGTGGATTGAATCAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LIQQHRYCGKGPHPKTFYSEAKR*WIESVS Trigger: GCTGACTGATTCAATCCAGCATCTCTTGGCTTCTGA...ATAGAAGGTCTTTGGATGTGGTCCCTTTCCACAATATCTATGTTGCTGGATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAAAAGATTGGAACATATTGCCAAAGCCAAAGTTAGTATGAAGCCAAGTGAAGCCAAGAGATGCTaGATTGAATCAGTCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GTKRLEHIAKAKVSMKPSEAKRC*IESVSL Trigger: CAAGCTGACTGATTCAATCCAGCATCTCTTGGCTTC...ACTTGGCTTCATACTAACTTTGGCTTTGGCAATATGTTCCAATCTTTTGGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR CAA 90 bp | TGGAAAGGGACCACATCCAAAGACCTTCTATGTCTGTGCAATTCATaGGAAAAATACAACTTTAATCCCTTGGACTGGAATACAGACATG | + |
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Preference number: 2 (lower is better) Translates to: WKGTTSKDLLCLCNS*EKYNFNPLDWNTDM Trigger: CATGTCTGTATTCCAGTCCAAGGGATTAAAGTTGTATTTTTCCAATGAATTGCACAGACATAGAAGGTCTTTGGATGTGGTCCCTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGACCACATCCAAAGACCTTCTATGTCTGTGCAATTCATTGGAAAAATACAAAAGGAACCAAAAGATTaGAACATATTGCCAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RDHIQRPSMSVQFIGKIQKEPKD*NILPKP Trigger: TGGCTTTGGCAATATGTTCCAATCTTTTGGTTCCTT...TTGTATTTTTCCAATGAATTGCACAGACATAGAAGGTCTTTGGATGTGGTCCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTAACTTCAGTTTTAGAGAATTTAATGCCTTCTTCTATATCAGGCAGTCACTTGAATCAGTCAGCTTaGAAGAGTAAGATTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SVTSVLENLMPSSISGSHLNQSA*KSKIVD Trigger: ATCTACAATCTTACTCTTCCAAGCTGACTGATTCAA...GTGACTGCCTGATATAGAAGAAGGCATTAAATTCTCTAAAACTGAAGTTACAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR TCA 72 bp | CTTCTAGGGGGCCTGTTTCAATTCCCAACACCCACATaGTTTCTCACGGTGATCTGTAACTTCAGTTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: LLGGLFQFPTPT*FLTVICNFSFR Trigger: TCTAAAACTGAAGTTACAGATCACCGTGAGAAATCATGTGGGTGTTGGGAATTGAAACAGGCCCCCTAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTAACTTCAGTTTTAGAGAATTTAATGCCTTCTTCTATATCAGGCAGTCACATGCACTTCCACATCTaGAGTAGGGCTCTCATCTCA | + |
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Preference number: 3 (lower is better) Translates to: SVTSVLENLMPSSISGSHMHFHI*SRALIS Trigger: TGAGATGAGAGCCCTACTCAAGATGTGGAAGTGCAT...GTGACTGCCTGATATAGAAGAAGGCATTAAATTCTCTAAAACTGAAGTTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR TCA 72 bp | TATCCACATTCTGCATCTGCTACATGTGTTGCTGTGTaGAAATCCCTGTGTCAAACAAGAAAGGAAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: YPHSASATCVAV*KSLCQTRKEER Trigger: TCTTTCTTCCTTTCTTGTTTGACACAGGGATTTTCACACAGCAACACATGTAGCAGATGCAGAATGTGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR TCA 72 bp | AAAGATTGGAACATATTGCCAAAGCCAAAGTTAGTATaGAGCCAAGTGGAGCAATTCATTCAGAAGCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: KDWNILPKPKLV*SQVEQFIQKPR Trigger: TCTTGGCTTCTGAATGAATTGCTCCACTTGGCTTCATACTAACTTTGGCTTTGGCAATATGTTCCAATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR TCA 72 bp | TCTATATCAGGCAGTCACATGGTGCACAGACATATGTaGAGCATGCATGGGCATTTACAAATGATAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: SISGSHMVHRHM*SMHGHLQMIIK Trigger: TTTTATTATCATTTGTAAATGCCCATGCATGCTTCACATATGTCTGTGCACCATGTGACTGCCTGATATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR CCA 72 bp | TGTGCAATTCATTGGAAAAATACAACTTTAATCCCTTaGACTGGAATACAGACATGCCCTTATTACAGATAT | + |
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Preference number: 3 (lower is better) Translates to: CAIHWKNTTLIP*TGIQTCPYYRY Trigger: ATATCTGTAATAAGGGCATGTCTGTATTCCAGTCCAAGGGATTAAAGTTGTATTTTTCCAATGAATTGCACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR TCA 90 bp | CAGAATGAGTCACAGATAAGTTATAGCCAACTCACATGGGAAGAGCACAGCAGATCCAAAGACTGTGCTTaGTATCAGAAGACAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: QNESQISYSQLTWEEHSRSKDCA*YQKTKT Trigger: TGTCTTTGTCTTCTGATATCAAGCACAGTCTTTGGA...TCTGCTGTGCTCTTCCCATGTGAGTTGGCTATAACTTATCTGTGACTCATTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR CAA 72 bp | GTGGAGCAATTCATTCAGAAGCCAAGAGATGCTGGATaGAATCAGTCAGCTTGGAAGAGTAAGATTGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: VEQFIQKPRDAG*NQSAWKSKIVD Trigger: ATCTACAATCTTACTCTTCCAAGCTGACTGATTCAATCCAGCATCTCTTGGCTTCTGAATGAATTGCTCCAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR CCA 90 bp | CAGAATGAGTCACAGATAAGTTATAGCCAACTCACATGGGAAGAGCACAGCAGATGTCCTTACTCTTCTTaGATAATTTCAGCTGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QNESQISYSQLTWEEHSRCPYSS*IISAVH Trigger: ATGCACAGCTGAAATTATCCAAGAAGAGTAAGGACA...TCTGCTGTGCTCTTCCCATGTGAGTTGGCTATAACTTATCTGTGACTCATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR TCA 90 bp | GGAACCAAAAGATTGGAACATATTGCCAAAGCCAAAGTTAGTATGAAGCCAAGTATGTACTACTTCCATTaGGGAGACAGCACTTTCATT | + |
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Preference number: 4 (lower is better) Translates to: GTKRLEHIAKAKVSMKPSMYYFH*GDSTFI Trigger: AATGAAAGTGCTGTCTCCTCAATGGAAGTAGTACAT...ACTTGGCTTCATACTAACTTTGGCTTTGGCAATATGTTCCAATCTTTTGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR TCA 90 bp | GGAACCAAAAGATTGGAACATATTGCCAAAGCCAAAGTTAGTATGAAGCCAAGTGCTGTAATTCACTTGTaGCTGAATAAAGTTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GTKRLEHIAKAKVSMKPSAVIHL*LNKVLL Trigger: GAGCAGAACTTTATTCAGTCACAAGTGAATTACAGC...ACTTGGCTTCATACTAACTTTGGCTTTGGCAATATGTTCCAATCTTTTGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| 3UTR CAA 72 bp | CTGTGCAATTCATTGGAAAAATACAACTTTAATCCCTaGGACTGGAATACAGACATGCCCTTATTACAGATA | + |
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Preference number: 4 (lower is better) Translates to: LCNSLEKYNFNP*DWNTDMPLLQI Trigger: TATCTGTAATAAGGGCATGTCTGTATTCCAGTCCAAGGGATTAAAGTTGTATTTTTCCAATGAATTGCACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR CCA 90 bp | TCTGTAACTTCAGTTTTAGAGAATTTAATGCCTTCTTCTATATCAGGCAGTCACAACACTTATGCGCCATaGATATTCTTTCTTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SVTSVLENLMPSSISGSHNTYAP*IFFLFL Trigger: CAGAAAAAGAAAGAATATCCATGGCGCATAAGTGTT...GTGACTGCCTGATATAGAAGAAGGCATTAAATTCTCTAAAACTGAAGTTACAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR CAA 90 bp | CAGAATGAGTCACAGATAAGTTATAGCCAACTCACATGGGAAGAGCACAGCAGAAGAGAACCCAGGACTTaGCAGGATGCCTCACTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QNESQISYSQLTWEEHSRREPRT*QDASLS Trigger: TGAGAGTGAGGCATCCTGCAAAGTCCTGGGTTCTCT...TCTGCTGTGCTCTTCCCATGTGAGTTGGCTATAACTTATCTGTGACTCATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR CAA 90 bp | AGGGACCACATCCAAAGACCTTCTATGTCTGTGCAATTCATTGGAAAAATACAAGCAAGACCACCCTCCTaGACATGTATAGCAGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RDHIQRPSMSVQFIGKIQARPPS*TCIAAF Trigger: AAAGGCTGCTATACATGTCAAGGAGGGTGGTCTTGC...TTGTATTTTTCCAATGAATTGCACAGACATAGAAGGTCTTTGGATGTGGTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR CAA 90 bp | TTAATCCAGCAACATAGATATTGTGGAAAGGGACCACATCCAAAGACCTTCTATTTGTCCTTACTCTTCTaGGATAATTTCAGCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LIQQHRYCGKGPHPKTFYLSLLF*DNFSCA Trigger: TGCACAGCTGAAATTATCCAAGAAGAGTAAGGACAA...ATAGAAGGTCTTTGGATGTGGTCCCTTTCCACAATATCTATGTTGCTGGATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS-3UTR CAA 90 bp | GGAACCAAAAGATTGGAACATATTGCCAAAGCCAAAGTTAGTATGAAGCCAAGTATCCAAAGACTGTGCTaGATATCAGAAGACAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: GTKRLEHIAKAKVSMKPSIQRLC*ISEDKD Trigger: GTCTTTGTCTTCTGATATCAAGCACAGTCTTTGGAT...ACTTGGCTTCATACTAACTTTGGCTTTGGCAATATGTTCCAATCTTTTGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118532.8 |
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| CDS CAA 72 bp | GAAGTAACACTTTCCTCCACAGCAAGACCACCCTCCTaGACATGTATAGCAGCCTTTTCGTGCAGCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: EVTLSSTARPPS*TCIAAFSCSSK Trigger: CTTACTGCTGCACGAAAAGGCTGCTATACATGTCAAGGAGGGTGGTCTTGCTGTGGAGGAAAGTGTTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095409.3 ENSMUST00000118532.8 |
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| CDS CAA 72 bp | CTGCTGTCAATCTTAGCGAGAAGAGAACCCAGGACTTaGCAGGATGCCTCACTCTCATCCCATGTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSILARREPRT*QDASLSSHVFS Trigger: AGAAAAGACATGGGATGAGAGTGAGGCATCCTGCAAAGTCCTGGGTTCTCTTCTCGCTAAGATTGACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095409.3 ENSMUST00000118532.8 |
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| CDS CAA 90 bp | TGCTCCTCTCTGCTGTCAATCTTAGCGAGAAGAGAACCCAGGACTTaGCAGGATGCCTCACTCTCATCCCATGTCTTTTCTTCTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: CSSLLSILARREPRT*QDASLSSHVFSSSE Trigger: TTCAGAAGAAGAAAAGACATGGGATGAGAGTGAGGCATCCTGCAAAGTCCTGGGTTCTCTTCTCGCTAAGATTGACAGCAGAGAGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095409.3 ENSMUST00000118532.8 |
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| CDS CAA 72 bp | GTGTTGCTGTGTGAAAATCCAAATCTGAAGAAAGTTTaGCATCCTTATGGTGTACCCACTGGAACTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: VLLCENPNLKKV*HPYGVPTGTDF Trigger: GAAGTCAGTTCCAGTGGGTACACCATAAGGATGCAAAACTTTCTTCAGATTTGGATTTTCACACAGCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095409.3 |
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| CDS TCA 72 bp | TATCCACATTCTGCATCTGCTACATGTGTTGCTGTGTaGAAATCCAAATCTGAAGAAAGTTTTGCATCCTTA | + |
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Preference number: 6 (lower is better) Translates to: YPHSASATCVAV*KSKSEESFASL Trigger: TAAGGATGCAAAACTTTCTTCAGATTTGGATTTTCACACAGCAACACATGTAGCAGATGCAGAATGTGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095409.3 |
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