Pregenerated sensors for KLRG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030114Ensembl transcript IDs: ENSMUST00000032207.9
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAAGCTCTACCACCCACCCCATCACTCTGGACTCCGGTAACCACTaGACTTCTCCCTACAGCTCAGGCACAAGCTCGGTCAGCTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: LSSTTHPITLDSGNH*TSPYSSGTSSVSSQ Trigger: TTGGGAGCTGACCGAGCTTGTGCCTGAGCTGTAGGGAGAAGTGCAGTGGTTACCGGAGTCCAGAGTGATGGGGTGGGTGGTAGAGCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR GCA 90 bp | CACAGTGTGATACTTCAGTGTGGGTGGAAAATGATCCAGTCGGCGTaGTCAGCATACCTGTCCTTCAGGCATTCGGAAGCACCCACAGTC | + |
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Preference number: 1 (lower is better) Translates to: HSVILQCGWKMIQSA*SAYLSFRHSEAPTV Trigger: GACTGTGGGTGCTTCCGAATGCCTGAAGGACAGGTATGCTGAGCACGCCGACTGGATCATTTTCCACCCACACTGAAGTATCACACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR TCA 90 bp | CTCCCTACAGCTCAGGCACAAGCTCGGTCAGCTCCCAAGCAGGAGTaGGCACATGAGGTGTTTGCGTCTTTCTGTCTTGTTGATGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: LPTAQAQARSAPKQE*AHEVFASFCLVDVY Trigger: ATAGACATCAACAAGACAGAAAGACGCAAACACCTCATGTGCTCACTCCTGCTTGGGAGCTGACCGAGCTTGTGCCTGAGCTGTAGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CCA 90 bp | ATAGTGATTGTACACATTTATGAGGCACAGTGTGATACTTCAGTGTaGGTGGAAAATGATCCAGTCGGCGTGCTCAGCATACCTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: IVIVHIYEAQCDTSV*VENDPVGVLSIPVL Trigger: AAGGACAGGTATGCTGAGCACGCCGACTGGATCATTTTCCACCCACACTGAAGTATCACACTGTGCCTCATAAATGTGTACAATCACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR-3UTR TCA 90 bp | TATGAGGCACAGTGTGATACTTCAGTGTGGGTGGAAAATGATCCAGTCGGCGTGTGGCAGAGGAAGGGATaGGAGAGCCAGGGTGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: YEAQCDTSVWVENDPVGVWQRKG*ESQGGY Trigger: ATAGCCACCCTGGCTCTCTCATCCCTTCCTCTGCCA...CACGCCGACTGGATCATTTTCCACCCACACTGAAGTATCACACTGTGCCTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CAA 90 bp | CCAAGCAGGAGTGAGCACATGAGGTGTTTGCGTCTTTCTGTCTTGTaGATGTCTATGGAACGTGTTACTGAATGCGGCAGGGGTTCATTC | + |
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Preference number: 2 (lower is better) Translates to: PSRSEHMRCLRLSVL*MSMERVTECGRGSF Trigger: GAATGAACCCCTGCCGCATTCAGTAACACGTTCCATAGACATCAACAAGACAGAAAGACGCAAACACCTCATGTGCTCACTCCTGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR-3UTR CCA 90 bp | GATACTTCAGTGTGGGTGGAAAATGATCCAGTCGGCGTGCTCAGCATACCTGTCTTCCGCCTAGCTATTTaGAAGCTCACAATAAATTGG | + |
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Preference number: 2 (lower is better) Translates to: DTSVWVENDPVGVLSIPVFRLAI*KLTINW Trigger: CCAATTTATTGTGAGCTTCCAAATAGCTAGGCGGAA...GACAGGTATGCTGAGCACGCCGACTGGATCATTTTCCACCCACACTGAAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR-3UTR TCA 90 bp | TATGAGGCACAGTGTGATACTTCAGTGTGGGTGGAAAATGATCCAGTCGGCGTGGTCTTTCTGTCTTGTTaGTGTCTATGGAACGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: YEAQCDTSVWVENDPVGVVFLSC*CLWNVL Trigger: TAACACGTTCCATAGACATCAACAAGACAGAAAGAC...CACGCCGACTGGATCATTTTCCACCCACACTGAAGTATCACACTGTGCCTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CAA 90 bp | TCCTTCAGGCATTCGGAAGCACCCACAGTCCTTCCGCCTAGCTATTaGGAAGCTCACAATAAATTGGCAACCATACAACTATTATTGATC | + |
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Preference number: 2 (lower is better) Translates to: SFRHSEAPTVLPPSY*EAHNKLATIQLLLI Trigger: GATCAATAATAGTTGTATGGTTGCCAATTTATTGTGAGCTTCCAAATAGCTAGGCGGAAGGACTGTGGGTGCTTCCGAATGCCTGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR-3UTR TCA 90 bp | CCGCCTAGCTATTTGGAAGCTCACAATAAATTGGCAACCATACAACTATTATTGTTTTCTACATATCTTTaGCAGAGATGGCAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PPSYLEAHNKLATIQLLLFSTYL*QRWQRK Trigger: CTTCCTCTGCCATCTCTGTCAAAGATATGTAGAAAA...CAATAATAGTTGTATGGTTGCCAATTTATTGTGAGCTTCCAAATAGCTAGGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR GCA 72 bp | ACCACCCACCCCATCACTCTGGACTCCGGTAACCACTaGACTTCTCCCTACAGCTCAGGCACAAGCTCGGTC | + |
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Preference number: 3 (lower is better) Translates to: TTHPITLDSGNH*TSPYSSGTSSV Trigger: GACCGAGCTTGTGCCTGAGCTGTAGGGAGAAGTGCAGTGGTTACCGGAGTCCAGAGTGATGGGGTGGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR TCA 72 bp | GCTCAGGCACAAGCTCGGTCAGCTCCCAAGCAGGAGTaGGCACATGAGGTGTTTGCGTCTTTCTGTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: AQAQARSAPKQE*AHEVFASFCLV Trigger: AACAAGACAGAAAGACGCAAACACCTCATGTGCTCACTCCTGCTTGGGAGCTGACCGAGCTTGTGCCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR-3UTR CAA 90 bp | GGTAACCACTGCACTTCTCCCTACAGCTCAGGCACAAGCTCGGTCAGCTCCCAAGAGCACATGAGGTGTTaGCGTCTTTCTGTCTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: GNHCTSPYSSGTSSVSSQEHMRC*RLSVLL Trigger: CAACAAGACAGAAAGACGCAAACACCTCATGTGCTC...TTGGGAGCTGACCGAGCTTGTGCCTGAGCTGTAGGGAGAAGTGCAGTGGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR GCA 72 bp | ATACTTCAGTGTGGGTGGAAAATGATCCAGTCGGCGTaGTCAGCATACCTGTCCTTCAGGCATTCGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: ILQCGWKMIQSA*SAYLSFRHSEA Trigger: TGCTTCCGAATGCCTGAAGGACAGGTATGCTGAGCACGCCGACTGGATCATTTTCCACCCACACTGAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR-3UTR CAA 90 bp | TACCTAAGCTCTACCACCCACCCCATCACTCTGGACTCCGGTAACCACTGCACTGTTTTCTACATATCTTaGACAGAGATGGCAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: YLSSTTHPITLDSGNHCTVFYIS*TEMAEE Trigger: TTCCTCTGCCATCTCTGTCAAAGATATGTAGAAAAC...AGTGCAGTGGTTACCGGAGTCCAGAGTGATGGGGTGGGTGGTAGAGCTTAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CCA 72 bp | ACATTTATGAGGCACAGTGTGATACTTCAGTGTGGGTaGAAAATGATCCAGTCGGCGTGCTCAGCATACCTG | + |
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Preference number: 3 (lower is better) Translates to: TFMRHSVILQCG*KMIQSACSAYL Trigger: CAGGTATGCTGAGCACGCCGACTGGATCATTTTCCACCCACACTGAAGTATCACACTGTGCCTCATAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CCA 72 bp | ATTCGGAAGCACCCACAGTCCTTCCGCCTAGCTATTTaGAAGCTCACAATAAATTGGCAACCATACAACTAT | + |
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Preference number: 3 (lower is better) Translates to: IRKHPQSFRLAI*KLTINWQPYNY Trigger: ATAGTTGTATGGTTGCCAATTTATTGTGAGCTTCCAAATAGCTAGGCGGAAGGACTGTGGGTGCTTCCGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CCA 72 bp | GAAGGGATGAGAGAGCCAGGGTGGCTATCTGCAGGGTaGGTATCCATTAAAATAAACTTTATCCATTTCATT | + |
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Preference number: 3 (lower is better) Translates to: EGMREPGWLSAG*VSIKINFIHFI Trigger: AATGAAATGGATAAAGTTTATTTTAATGGATACCCACCCTGCAGATAGCCACCCTGGCTCTCTCATCCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR TCA 72 bp | AAGCTCACAATAAATTGGCAACCATACAACTATTATTaGTCGTTATTGTCACCCCACACCAGCCAAACCATT | + |
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Preference number: 3 (lower is better) Translates to: KLTINWQPYNYY*SLLSPHTSQTI Trigger: AATGGTTTGGCTGGTGTGGGGTGACAATAACGATCAATAATAGTTGTATGGTTGCCAATTTATTGTGAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR CCA 90 bp | TCCTTCCGCCTAGCTATTTGGAAGCTCACAATAAATTGGCAACCATACAACTATTCCTCGTCCAGAGGATaGGGCAGCTGGGGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SFRLAIWKLTINWQPYNYSSSRG*GSWGSG Trigger: CCCACTGCCCCAGCTGCCCCATCCTCTGGACGAGGA...ATAGTTGTATGGTTGCCAATTTATTGTGAGCTTCCAAATAGCTAGGCGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR TCA 90 bp | AGGAGTGAGCACATGAGGTGTTTGCGTCTTTCTGTCTTGTTGATGTCTATGGAATGGAGGCCATTTCTGTaGATGGCACCGCACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RSEHMRCLRLSVLLMSMEWRPFL*MAPHLC Trigger: ACAGAGGTGCGGTGCCATTCACAGAAATGGCCTCCA...TTCCATAGACATCAACAAGACAGAAAGACGCAAACACCTCATGTGCTCACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CAA 72 bp | AGTGAGCACATGAGGTGTTTGCGTCTTTCTGTCTTGTaGATGTCTATGGAACGTGTTACTGAATGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SEHMRCLRLSVL*MSMERVTECGR Trigger: CCTGCCGCATTCAGTAACACGTTCCATAGACATCAACAAGACAGAAAGACGCAAACACCTCATGTGCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CAA 72 bp | AGGAGTGAGCACATGAGGTGTTTGCGTCTTTCTGTCTaGTTGATGTCTATGGAACGTGTTACTGAATGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RSEHMRCLRLSV*LMSMERVTECG Trigger: GCCGCATTCAGTAACACGTTCCATAGACATCAACAAGACAGAAAGACGCAAACACCTCATGTGCTCACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| 3UTR CAA 72 bp | CATTCGGAAGCACCCACAGTCCTTCCGCCTAGCTATTaGGAAGCTCACAATAAATTGGCAACCATACAACTA | + |
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Preference number: 4 (lower is better) Translates to: HSEAPTVLPPSY*EAHNKLATIQL Trigger: TAGTTGTATGGTTGCCAATTTATTGTGAGCTTCCAAATAGCTAGGCGGAAGGACTGTGGGTGCTTCCGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR GCA 90 bp | AGCCCAACAGGAAAAGGCCAACCCCCAGAAAGGTATGCTAATCCTCTGTCTAATTTCTTACAGATCCACTaGAAAGCAACTTCACAACTG | + |
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Preference number: 4 (lower is better) Translates to: SPTGKGQPPERYANPLSNFLQIH*KATSQL Trigger: CAGTTGTGAAGTTGCTTTGCAGTGGATCTGTAAGAA...ATTAGACAGAGGATTAGCATACCTTTCTGGGGGTTGGCCTTTTCCTGTTGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR TCA 90 bp | AACCCCCAGAAAGGTATGCTAATCCTCTGTCTAATGGCATATCATAACAGGTTTACATCAGTAGACTCATaGGAATCACAGTCAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NPQKGMLILCLMAYHNRFTSVDS*ESQSKA Trigger: GGCTTTTGACTGTGATTCTCATGAGTCTACTGATGT...AAACCTGTTATGATATGCCATTAGACAGAGGATTAGCATACCTTTCTGGGGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS CCA 90 bp | GCACCTCTGTATCAAGCTGTTGGTAAGAATCCTCAAGCTGAGCGCTaGGCCGCCTTCCCACCTCCAGCCATCAATGTTCCTCAAGCCGAT | + |
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Preference number: 5 (lower is better) Translates to: APLYQAVGKNPQAER*AAFPPPAINVPQAD Trigger: ATCGGCTTGAGGAACATTGATGGCTGGAGGTGGGAAGGCGGCCCAGCGCTCAGCTTGAGGATTCTTACCAACAGCTTGATACAGAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR CAA 90 bp | CTGCACTTCTCCCTACAGCTCAGGCACAAGCTCGGTCAGCTCCCAAGCAGGAGTCGGTGTAAGACAGCTTaGAGCTTCCATCTGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: LHFSLQLRHKLGQLPSRSRCKTA*SFHLDS Trigger: TGAGTCCAGATGGAAGCTCAAAGCTGTCTTACACCG...ACTCCTGCTTGGGAGCTGACCGAGCTTGTGCCTGAGCTGTAGGGAGAAGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR CAA 90 bp | CTGCACTTCTCCCTACAGCTCAGGCACAAGCTCGGTCAGCTCCCAAGCAGGAGTAGCTTCACTCCCTGGTaGTCCGGAAATGTAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LHFSLQLRHKLGQLPSRSSFTPW*SGNVRR Trigger: TCTCCTTACATTTCCGGACAACCAGGGAGTGAAGCT...ACTCCTGCTTGGGAGCTGACCGAGCTTGTGCCTGAGCTGTAGGGAGAAGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS TCA 90 bp | CCTTGGAGCCGCAGCACAGGATCCGTTGATACATCAGTAGACTCATaGGAATCACAGTCAAAAGCCCCAAAGCCACCATTGCAAAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PWSRSTGSVDTSVDS*ESQSKAPKPPLQSG Trigger: CCCGCTTTGCAATGGTGGCTTTGGGGCTTTTGACTGTGATTCTCATGAGTCTACTGATGTATCAACGGATCCTGTGCTGCGGCTCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR CAA 90 bp | GGTAACCACTGCACTTCTCCCTACAGCTCAGGCACAAGCTCGGTCAGCTCCCAAAGGAGATGTGAGCCTTaGTCTGCACAGAATTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GNHCTSPYSSGTSSVSSQRRCEP*SAQNFR Trigger: TCTGAAATTCTGTGCAGACAAAGGCTCACATCTCCT...TTGGGAGCTGACCGAGCTTGTGCCTGAGCTGTAGGGAGAAGTGCAGTGGTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS TCA 90 bp | CACTGCAAAGCAACTTCACAACTGGAGGCTTGGAGGCCATTTCTGTaGATGGCACCGCACCTCTGTATCAAGCTGTTGGTAAGAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: HCKATSQLEAWRPFL*MAPHLCIKLLVRIL Trigger: GAGGATTCTTACCAACAGCTTGATACAGAGGTGCGGTGCCATTCACAGAAATGGCCTCCAAGCCTCCAGTTGTGAAGTTGCTTTGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS TCA 90 bp | CAGTGGGAACATGTAGAGTCCTTGGAGCCGCAGCACAGGATCCGTTaGTACATCAGTAGACTCATGAGAATCACAGTCAAAAGCCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: QWEHVESLEPQHRIR*YISRLMRITVKSPK Trigger: TTTGGGGCTTTTGACTGTGATTCTCATGAGTCTACTGATGTATCAACGGATCCTGTGCTGCGGCTCCAAGGACTCTACATGTTCCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS CCA 90 bp | AGTATAGGACCTTCTTACAGATCCACTGCAAAGCAACTTCACAACTaGAGGCTTGGAGGCCATTTCTGTGAATGGCACCGCACCTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SIGPSYRSTAKQLHN*RLGGHFCEWHRTSV Trigger: TACAGAGGTGCGGTGCCATTCACAGAAATGGCCTCCAAGCCTCCAGTTGTGAAGTTGCTTTGCAGTGGATCTGTAAGAAGGTCCTATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR CAA 90 bp | AAAGATTCCCCAGACCCATTCCCTCTTTTTAAAGACATGTGGCAGATCCGAGGCTTCACAACTGGAGGCTaGGAGGCCATTTCTGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: KDSPDPFPLFKDMWQIRGFTTGG*EAISVN Trigger: ATTCACAGAAATGGCCTCCAAGCCTCCAGTTGTGAA...GCCTCGGATCTGCCACATGTCTTTAAAAAGAGGGAATGGGTCTGGGGAATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS-3UTR CAA 90 bp | AAAGATTCCCCAGACCCATTCCCTCTTTTTAAAGACATGTGGCAGATCCGAGGCCTCTGTATCAAGCTGTaGGTAAGAATCCTCAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: KDSPDPFPLFKDMWQIRGLCIKL*VRILKL Trigger: CAGCTTGAGGATTCTTACCAACAGCTTGATACAGAG...GCCTCGGATCTGCCACATGTCTTTAAAAAGAGGGAATGGGTCTGGGGAATCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS TCA 90 bp | TCCAAACAGCTTCACTCCCTGGTTGTCCGGAAATGTAAGGAGATGTaGGCCTTTGTCTGCACAGAATTTCAGACTAGAATTCCAGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SKQLHSLVVRKCKEM*AFVCTEFQTRIPVL Trigger: AAGGACTGGAATTCTAGTCTGAAATTCTGTGCAGACAAAGGCTCACATCTCCTTACATTTCCGGACAACCAGGGAGTGAAGCTGTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS CCA 72 bp | CCATTCCTCGTCCAGAGGATGGGGCAGCTGGGGCAGTaGGAACATGTAGAGTCCTTGGAGCCGCAGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: PFLVQRMGQLGQ*EHVESLEPQHR Trigger: CCTGTGCTGCGGCTCCAAGGACTCTACATGTTCCCACTGCCCCAGCTGCCCCATCCTCTGGACGAGGAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS CCA 72 bp | TATCAAGCTGTTGGTAAGAATCCTCAAGCTGAGCGCTaGGCCGCCTTCCCACCTCCAGCCATCAATGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: YQAVGKNPQAER*AAFPPPAINVP Trigger: AGGAACATTGATGGCTGGAGGTGGGAAGGCGGCCCAGCGCTCAGCTTGAGGATTCTTACCAACAGCTTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS TCA 72 bp | CATGTAGAGTCCTTGGAGCCGCAGCACAGGATCCGTTaGTACATCAGTAGACTCATGAGAATCACAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HVESLEPQHRIR*YISRLMRITVK Trigger: TTTGACTGTGATTCTCATGAGTCTACTGATGTATCAACGGATCCTGTGCTGCGGCTCCAAGGACTCTACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS CAA 72 bp | CCCTGGTTGTCCGGAAATGTAAGGAGATGTGAGCCTTaGTCTGCACAGAATTTCAGACTAGAATTCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PWLSGNVRRCEP*SAQNFRLEFQS Trigger: GGACTGGAATTCTAGTCTGAAATTCTGTGCAGACAAAGGCTCACATCTCCTTACATTTCCGGACAACCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS CAA 90 bp | AGCTTCACTCCCTGGTTGTCCGGAAATGTAAGGAGATGTGAGCCTTaGTCTGCACAGAATTTCAGACTAGAATTCCAGTCCTTTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFTPWLSGNVRRCEP*SAQNFRLEFQSFFS Trigger: GGAGAAAAAGGACTGGAATTCTAGTCTGAAATTCTGTGCAGACAAAGGCTCACATCTCCTTACATTTCCGGACAACCAGGGAGTGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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| CDS TCA 72 bp | CTTCACTCCCTGGTTGTCCGGAAATGTAAGGAGATGTaGGCCTTTGTCTGCACAGAATTTCAGACTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: LHSLVVRKCKEM*AFVCTEFQTRI Trigger: AATTCTAGTCTGAAATTCTGTGCAGACAAAGGCTCACATCTCCTTACATTTCCGGACAACCAGGGAGTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032207.9 |
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