Pregenerated sensors for KLRC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052736Ensembl transcript IDs: ENSMUST00000071920.11, ENSMUST00000112057.9, ENSMUST00000118401.8, ENSMUST00000119533.2, ENSMUST00000145984.8
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCCATGGTATTGCTGGTACCTCAAGGGGAAGGAATGCCTCAGCATaGGCCCTCAGAGGCAACCCCTGCCACCTCACATACCTTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: IHGIAGTSRGRNASA*ALRGNPCHLTYLAL Trigger: TAAAGCAAGGTATGTGAGGTGGCAGGGGTTGCCTCTGAGGGCCCATGCTGAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR GCA 90 bp | GGCATCTATATGGATGCTGGAGAGCCAAATGCTGGTCCTCAACCTTaGACACGAAGTATGCTAGGCATTAAGCTATTCCCCAAACACATA | + |
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Preference number: 1 (lower is better) Translates to: GIYMDAGEPNAGPQP*TRSMLGIKLFPKHI Trigger: TATGTGTTTGGGGAATAGCTTAATGCCTAGCATACTTCGTGTGCAAGGTTGAGGACCAGCATTTGGCTCTCCAGCATCCATATAGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR GCA 90 bp | TCCCATGCCATAAACAAACTCTATTTCATACTATATCCATGGTATTaGTGGTACCTCAAGGGGAAGGAATGCCTCAGCATGGGCCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SHAINKLYFILYPWY*WYLKGKECLSMGPQ Trigger: CTGAGGGCCCATGCTGAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CCA 90 bp | TCCCCTTCCCATGCCATAAACAAACTCTATTTCATACTATATCCATaGTATTGCTGGTACCTCAAGGGGAAGGAATGCCTCAGCATGGGC | + |
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Preference number: 1 (lower is better) Translates to: SPSHAINKLYFILYP*YCWYLKGKECLSMG Trigger: GCCCATGCTGAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGAAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CCA 90 bp | CTAGGCATTAAGCTATTCCCCAAACACATAAAGCAGATTTCTTATTaGGATAGGAAACCAAACTCCCGATTCAAGTTTTCCTTCTACACA | + |
|
Preference number: 1 (lower is better) Translates to: LGIKLFPKHIKQISY*DRKPNSRFKFSFYT Trigger: TGTGTAGAAGGAAAACTTGAATCGGGAGTTTGGTTTCCTATCCCAATAAGAAATCTGCTTTATGTGTTTGGGGAATAGCTTAATGCCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR TCA 90 bp | AATATTTGTGAAGATTCATTGACTGATTCTTTGGTTCATTTCCTTTaGAAGTCACGATCACTTTTGCCTAGGCTGAGATCACGACAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: NICEDSLTDSLVHFL*KSRSLLPRLRSRQS Trigger: ACTTTGTCGTGATCTCAGCCTAGGCAAAAGTGATCGTGACTTTCAAAGGAAATGAACCAAAGAATCAGTCAATGAATCTTCACAAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR GCA 90 bp | TACCTGCTTGTGACCACATCTGTTAGCATTCCTTCTAGGCTCTGCCTGTCTTTCCTCAAGGGGAAGGAATaGCTCAGCATGGGCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: YLLVTTSVSIPSRLCLSFLKGKE*LSMGPQ Trigger: CTGAGGGCCCATGCTGAGGCATTCCTTCCCCTTGAG...GAAAGACAGGCAGAGCCTAGAAGGAATGCTAACAGATGTGGTCACAAGCAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGACCACATCTGTTAGCATTCCTTCTAGGCTCTGCCTGTCTTTCTCGCTGGCTGGTCCTCAACCTTaGACACGAAGTATGCTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LVTTSVSIPSRLCLSFSLAGPQP*TRSMLG Trigger: GCCTAGCATACTTCGTGTGCAAGGTTGAGGACCAGC...CAGCGAGAAAGACAGGCAGAGCCTAGAAGGAATGCTAACAGATGTGGTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR GCA 90 bp | TACATTGAGGCAAGTTCTCTAGCTGATCTCACAGACTTGACTGCTCTAGCTGCCATTCCTTCTAGGCTCTaGCTGTCTTTCTCGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: YIEASSLADLTDLTALAAIPSRL*LSFSLS Trigger: AGACAGCGAGAAAGACAGGCAGAGCCTAGAAGGAAT...GGCAGCTAGAGCAGTCAAGTCTGTGAGATCAGCTAGAGAACTTGCCTCAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR CCA 90 bp | ACATCTGTTAGCATTCCTTCTAGGCTCTGCCTGTCTTTCTCGCTGTCTGTTTTTTGGAGAGCCAAATGCTaGTCCTCAACCTTGCACACG | + |
|
Preference number: 2 (lower is better) Translates to: TSVSIPSRLCLSFSLSVFWRAKC*SSTLHT Trigger: CGTGTGCAAGGTTGAGGACCAGCATTTGGCTCTCCA...AAAAACAGACAGCGAGAAAGACAGGCAGAGCCTAGAAGGAATGCTAACAGATGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CAA 90 bp | TTCCCATGCCATAAACAAACTCTATTTCATACTATATCCATGGTATaGCTGGTACCTCAAGGGGAAGGAATGCCTCAGCATGGGCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FPCHKQTLFHTISMV*LVPQGEGMPQHGPS Trigger: TGAGGGCCCATGCTGAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR GCA 90 bp | TACCTGCTTGTGACCACATCTGTTAGCATTCCTTCTAGGCTCTGCCTGTCTTTCCAACTCCCCTTCCCATaGCATAAACAAACTCTATTT | + |
|
Preference number: 2 (lower is better) Translates to: YLLVTTSVSIPSRLCLSFQLPFP*HKQTLF Trigger: AAATAGAGTTTGTTTATGGCATGGGAAGGGGAGTTG...GAAAGACAGGCAGAGCCTAGAAGGAATGCTAACAGATGTGGTCACAAGCAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR TCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCAAACTATGCAACATTTaGACCTGGCAGACTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: MILWILVANSSKGSQRSGKLCNI*TWQTSS Trigger: ACTGGAAGTCTGCCAGGTTCAAATGTTGCATAGTTT...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| 3UTR-3UTR TCA 90 bp | ACATCTGTTAGCATTCCTTCTAGGCTCTGCCTGTCTTTCTCGCTGTCTGTTTTTATGGACAGTTTGACCTaGAGCATGTTCTTTGAATAT | + |
|
Preference number: 2 (lower is better) Translates to: TSVSIPSRLCLSFSLSVFMDSLT*SMFFEY Trigger: ATATTCAAAGAACATGCTTCAGGTCAAACTGTCCAT...AAAAACAGACAGCGAGAAAGACAGGCAGAGCCTAGAAGGAATGCTAACAGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGGCCTTTGTTATGATCCTATTTGGATGTTTTACCTGTCCCTGAGAAGATATCAGGCATCTATATaGATGCTGGAGAGCCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: LCGLCYDPIWMFYLSLRRYQASI*MLESQM Trigger: CATTTGGCTCTCCAGCATCCATATAGATGCCTGATA...TCTTCTCAGGGACAGGTAAAACATCCAAATAGGATCATAACAAAGGCCACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGATGTTTTACCTGTCCCTGAGAAGAATGTATATCCCCTATCTGCTAATATCTACCAATGGACAGTTTaGCCTGAAGCATGTTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LDVLPVPEKNVYPLSANIYQWTV*PEACSL Trigger: CAAAGAACATGCTTCAGGTCAAACTGTCCATTGGTA...GATATTAGCAGATAGGGGATATACATTCTTCTCAGGGACAGGTAAAACATCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAGAGAAACTATGCAACATTTaGACCTGGCAGACTTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILIGNNNCVCYRRTGQLEKLCNI*TWQTSS Trigger: ACTGGAAGTCTGCCAGGTTCAAATGTTGCATAGTTT...CTCTAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCCCATGCCATAAACAAACTCTATTTCATACTATATCCATGGTATTGCTGTTGGTTCATTTCCTTTaGAAGTCACGATCACTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PFPCHKQTLFHTISMVLLLVHFL*KSRSLL Trigger: CAAAAGTGATCGTGACTTTCAAAGGAAATGAACCAA...CAGCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR GCA 72 bp | TATCCATGGTATTGCTGGTACCTCAAGGGGAAGGAATaGCTCAGCATGGGCCCTCAGAGGCAACCCCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YPWYCWYLKGKE*LSMGPQRQPLP Trigger: TGGCAGGGGTTGCCTCTGAGGGCCCATGCTGAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR GCA 72 bp | ATGGATGCTGGAGAGCCAAATGCTGGTCCTCAACCTTaGACACGAAGTATGCTAGGCATTAAGCTATTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: MDAGEPNAGPQP*TRSMLGIKLFP Trigger: GGGGAATAGCTTAATGCCTAGCATACTTCGTGTGCAAGGTTGAGGACCAGCATTTGGCTCTCCAGCATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR GCA 72 bp | CTAGCTGCCCAGCTTACTCTAGTGATCTCTAATCTCTaGCTCCTACATGGAGGATTACCTGCTTGTGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LAAQLTLVISNL*LLHGGLPACDH Trigger: GTGGTCACAAGCAGGTAATCCTCCATGTAGGAGGCAGAGATTAGAGATCACTAGAGTAAGCTGGGCAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CCA 72 bp | AACAAACTCTATTTCATACTATATCCATGGTATTGCTaGTACCTCAAGGGGAAGGAATGCCTCAGCATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NKLYFILYPWYC*YLKGKECLSMG Trigger: GCCCATGCTGAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGATATAGTATGAAATAGAGTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTGTGGCCTTTGTTATGATCCTATTTGGATGTTTTACCTGTCCCTGAGAAGAAAGTCACGATCACTTTaGCCTAGGCTGAGATCACGA | + |
|
Preference number: 3 (lower is better) Translates to: LCGLCYDPIWMFYLSLRRKSRSL*PRLRSR Trigger: TCGTGATCTCAGCCTAGGCAAAAGTGATCGTGACTT...TCTTCTCAGGGACAGGTAAAACATCCAAATAGGATCATAACAAAGGCCACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR TCA 72 bp | ATTTCCTTTGAAAGTCACGATCACTTTTGCCTAGGCTaGGATCACGACAAAGTTAAACCTGTGCAAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: ISFESHDHFCLG*DHDKVKPVQTL Trigger: CAGTGTTTGCACAGGTTTAACTTTGTCGTGATCTCAGCCTAGGCAAAAGTGATCGTGACTTTCAAAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CCA 72 bp | CATGCCATAAACAAACTCTATTTCATACTATATCCATaGTATTGCTGGTACCTCAAGGGGAAGGAATGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HAINKLYFILYP*YCWYLKGKECL Trigger: GAGGCATTCCTTCCCCTTGAGGTACCAGCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CCA 72 bp | TTTATAAAACACAACAAAACCTATCAGGCATCTATATaGATGCTGGAGAGCCAAATGCTGGTCCTCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: FIKHNKTYQASI*MLESQMLVLNL Trigger: AAGGTTGAGGACCAGCATTTGGCTCTCCAGCATCCATATAGATGCCTGATAGGTTTTGTTGTGTTTTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAGAGAAAACTATGCAACATTaGAACCTGGCAGACTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: ILIGNNNCVCYRRTGQLEKTMQH*NLADFQ Trigger: CTGGAAGTCTGCCAGGTTCAAATGTTGCATAGTTTT...CTCTAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGATGTTTTACCTGTCCCTGAGAAGAATGTATATCCCCTATCTGCTAATATCCAAATTTTGAGGGGATaGATACCAATGGACAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LDVLPVPEKNVYPLSANIQILRG*IPMDSL Trigger: CAAACTGTCCATTGGTATCAATCCCCTCAAAATTTG...GATATTAGCAGATAGGGGATATACATTCTTCTCAGGGACAGGTAAAACATCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR TCA 72 bp | GAAGATTCATTGACTGATTCTTTGGTTCATTTCCTTTaGAAGTCACGATCACTTTTGCCTAGGCTGAGATCA | + |
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Preference number: 3 (lower is better) Translates to: EDSLTDSLVHFL*KSRSLLPRLRS Trigger: TGATCTCAGCCTAGGCAAAAGTGATCGTGACTTTCAAAGGAAATGAACCAAAGAATCAGTCAATGAATCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR TCA 72 bp | CACGACAAAGTTAAACCTGTGCAAACACTGGAACTTTaGAAATTATTGTGTACCTTTCTGGGGTTTATTAGG | + |
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Preference number: 3 (lower is better) Translates to: HDKVKPVQTLEL*KLLCTFLGFIR Trigger: CCTAATAAACCCCAGAAAGGTACACAATAATTTTCAAAGTTCCAGTGTTTGCACAGGTTTAACTTTGTCGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR TCA 72 bp | ATTTTGAGGGGATTGATACCAATGGACAGTTTGACCTaGAGCATGTTCTTTGAATATTGTACAAGAATACAT | + |
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Preference number: 3 (lower is better) Translates to: ILRGLIPMDSLT*SMFFEYCTRIH Trigger: ATGTATTCTTGTACAATATTCAAAGAACATGCTTCAGGTCAAACTGTCCATTGGTATCAATCCCCTCAAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| 3UTR CCA 72 bp | AAACACTGGAACTTTGAAAATTATTGTGTACCTTTCTaGGGTTTATTAGGGTTTAATGTTCTGCTCCTTAGT | + |
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Preference number: 3 (lower is better) Translates to: KHWNFENYCVPF*GLLGFNVLLLS Trigger: ACTAAGGAGCAGAACATTAAACCCTAATAAACCCCAGAAAGGTACACAATAATTTTCAAAGTTCCAGTGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGAATAAAACTATGCAACATTTGAACCTGGCAGACTTCCAGTGCAGGTGTTGCAGTAGCCATGCCTaGTGGCCTTCAGATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SRNKTMQHLNLADFQCRCCSSHA*WPSDAS Trigger: AGAAGCATCTGAAGGCCAGCAGGCATGGCTACTGCA...ACACCTGCACTGGAAGTCTGCCAGGTTCAAATGTTGCATAGTTTTATTCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR TCA 90 bp | CTTGTGACCACATCTGTTAGCATTCCTTCTAGGCTCTGCCTGTCTTTCTCGCTGGAGCTTCTCTGGAGGTaGTGCAAAATTTTTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LVTTSVSIPSRLCLSFSLELLWR*CKIFAV Trigger: TACTGCAAAAATTTTGCATCACCTCCAGAGAAGCTC...CAGCGAGAAAGACAGGCAGAGCCTAGAAGGAATGCTAACAGATGTGGTCACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR GCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCTGCAGTAGCCATGCCTaGTGGCCTTCAGATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: MILWILVANSSKGSQRSGCSSHA*WPSDAS Trigger: AGAAGCATCTGAAGGCCAGCAGGCATGGCTACTGCA...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR GCA 90 bp | CAACCTTGCACACGAAGTATGCTAGGCATTAAGCTATTCCCCAAACACATAAAGATGAGGACAAGGCTGTaGTTTGGAGAGCAAGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: QPCTRSMLGIKLFPKHIKMRTRL*FGEQGV Trigger: CACGCCTTGCTCTCCAAAGCACAGCCTTGTCCTCAT...CTTTATGTGTTTGGGGAATAGCTTAATGCCTAGCATACTTCGTGTGCAAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR CCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCGCGTGTGAGCCTTTCTaGGTTCTAACCAAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: MILWILVANSSKGSQRSGACEPF*VLTKKG Trigger: CCCCTTCTTGGTTAGAACCCAGAAAGGCTCACACGC...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112057.9 |
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| CDS-3UTR TCA 90 bp | GGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAGGCTTTCCTGGGTTCTaGGGCCTGTTCAGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GILIGNNNCVCYRRTGQLGFPGF*GLFSSK Trigger: CTTGGAACTGAACAGGCCTCAGAACCCAGGAAAGCC...TAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000145984.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGTTTTACCTGTCCCTGAGAAGAATGTATATCCCCTATCTGCTAATATCGGCTTTCCTGGGTTCTaGGGCCTGTTCAGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LDVLPVPEKNVYPLSANIGFPGF*GLFSSK Trigger: CTTGGAACTGAACAGGCCTCAGAACCCAGGAAAGCC...GATATTAGCAGATAGGGGATATACATTCTTCTCAGGGACAGGTAAAACATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR CCA 90 bp | ATCTATGTTGGTTCCAGGAATAAAACTATGCAACATTTGAACCTGGCAGACTTCGACAAGGCTGTGCTTTaGAGAGCAAGGCGTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IYVGSRNKTMQHLNLADFDKAVL*RARRVS Trigger: GCTCACACGCCTTGCTCTCCAAAGCACAGCCTTGTC...GAAGTCTGCCAGGTTCAAATGTTGCATAGTTTTATTCCTGGAACCAACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112057.9 |
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| CDS-3UTR TCA 90 bp | ATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAGAGGGCTTTCCTGGGTTCTaGGGCCTGTTCAGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ILIGNNNCVCYRRTGQLEGFPGF*GLFSSK Trigger: CTTGGAACTGAACAGGCCTCAGAACCCAGGAAAGCC...CTCTAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000145984.8 |
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| CDS-3UTR GCA 90 bp | GGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAATGAGGACAAGGCTGTaGTTTGGAGAGCAAGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: GILIGNNNCVCYRRTGQLMRTRL*FGEQGV Trigger: CACGCCTTGCTCTCCAAAGCACAGCCTTGTCCTCAT...TAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112057.9 ENSMUST00000145984.8 |
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| CDS-3UTR CCA 90 bp | CTCCCCTTCCCATGCCATAAACAAACTCTATTTCATACTATATCCATGGTATTGGCGTGTGAGCCTTTCTaGGTTCTAACCAAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPFPCHKQTLFHTISMVLACEPF*VLTKKG Trigger: CCCCTTCTTGGTTAGAACCCAGAAAGGCTCACACGC...CAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGAAGGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR GCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCTTACTGAAACGGAACTaGGCCTGGGTTTTCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: MILWILVANSSKGSQRSGLLKRN*AWVFFV Trigger: CACAAAGAAAACCCAGGCGCAGTTCCGTTTCAGTAA...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR TCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCGAGCTTCTCTGGAGGTaGTGCAAAATTTTTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: MILWILVANSSKGSQRSGELLWR*CKIFAV Trigger: TACTGCAAAAATTTTGCATCACCTCCAGAGAAGCTC...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR GCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCACCAGTGAAAGAGATTaGAGAAAATCCTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: MILWILVANSSKGSQRSGTSERD*RKSCSS Trigger: AGAGGAGCAGGATTTTCTGCAATCTCTTTCACTGGT...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR GCA 90 bp | ATCTATGTTGGTTCCAGGAATAAAACTATGCAACATTTGAACCTGGCAGACTTCTTACTGAAACGGAACTaGGCCTGGGTTTTCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYVGSRNKTMQHLNLADFLLKRN*AWVFFV Trigger: CACAAAGAAAACCCAGGCGCAGTTCCGTTTCAGTAA...GAAGTCTGCCAGGTTCAAATGTTGCATAGTTTTATTCCTGGAACCAACATAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR GCA 90 bp | CCCTTCCCATGCCATAAACAAACTCTATTTCATACTATATCCATGGTATTGCTGTTACTGAAACGGAACTaGGCCTGGGTTTTCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PFPCHKQTLFHTISMVLLLLKRN*AWVFFV Trigger: CACAAAGAAAACCCAGGCGCAGTTCCGTTTCAGTAA...CAGCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR GCA 90 bp | ATCTATGTTGGTTCCAGGAATAAAACTATGCAACATTTGAACCTGGCAGACTTCACCAGTGAAAGAGATTaGAGAAAATCCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYVGSRNKTMQHLNLADFTSERD*RKSCSS Trigger: AGAGGAGCAGGATTTTCTGCAATCTCTTTCACTGGT...GAAGTCTGCCAGGTTCAAATGTTGCATAGTTTTATTCCTGGAACCAACATAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR GCA 90 bp | ATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAGAGACCAGTGAAAGAGATTaGAGAAAATCCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILIGNNNCVCYRRTGQLETSERD*RKSCSS Trigger: AGAGGAGCAGGATTTTCTGCAATCTCTTTCACTGGT...CTCTAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000145984.8 |
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| CDS-3UTR CCA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCCAGTTACATTCATCATaGGAAATCTCTGCTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MILWILVANSSKGSQRSGQLHSS*EISAIF Trigger: AAAGATAGCAGAGATTTCCCATGATGAATGTAACTG...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR CCA 90 bp | GGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTACAGTTACATTCATCATaGGAAATCTCTGCTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GILIGNNNCVCYRRTGQLQLHSS*EISAIF Trigger: AAAGATAGCAGAGATTTCCCATGATGAATGTAACTG...TAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS GCA 90 bp | CTAAACTCCAGCAGGCGATCTCCTGCTGCATTACTGAAACGGAACTaGGCCTGGGTTTTCTTTGTGGCTTTCCTGGGTTCTGAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNSSRRSPAALLKRN*AWVFFVAFLGSEAC Trigger: ACAGGCCTCAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGCAGTTCCGTTTCAGTAATGCAGCAGGAGATCGCCTGCTGGAGTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS CCA 90 bp | TCCAGCAGGCGATCTCCTGCTGCATTACTGAAACGGAACTGCGCCTaGGTTTTCTTTGTGGCTTTCCTGGGTTCTGAGGCCTGTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRRSPAALLKRNCA*VFFVAFLGSEACSV Trigger: AACTGAACAGGCCTCAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGCAGTTCCGTTTCAGTAATGCAGCAGGAGATCGCCTGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 90 bp | AAACCAGATGGTGCCCAGGATTCCAGCGATGAGCTTCTCTGGAGGTaGTGCAAAATTTTTGCAGTAGCCATGCCTGCTGGCCTTCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPDGAQDSSDELLWR*CKIFAVAMPAGLQM Trigger: CATCTGAAGGCCAGCAGGCATGGCTACTGCAAAAATTTTGCATCACCTCCAGAGAAGCTCATCGCTGGAATCCTGGGCACCATCTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 90 bp | CTTTGGACAATGAGGACAAGGCTGTGCTTTGGAGAGCAAGGCGTGTaGGCCTTTCTGGGTTCTAACCAAGAAGGGGTGGATCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWTMRTRLCFGEQGV*AFLGSNQEGVDLLL Trigger: AAGAAGCAGATCCACCCCTTCTTGGTTAGAACCCAGAAAGGCTCACACGCCTTGCTCTCCAAAGCACAGCCTTGTCCTCATTGTCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112057.9 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGAATAAAACTATGCAACATTTGAACCTGGCAGACTTCCAGTGCAGGTGTGCGCCTGGGTTTTCTTaGTGGCTTTCCTGGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRNKTMQHLNLADFQCRCAPGFS*WLSWVL Trigger: CAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGC...ACACCTGCACTGGAAGTCTGCCAGGTTCAAATGTTGCATAGTTTTATTCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR CAA 90 bp | GGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAGCGCCTGGGTTTTCTTaGTGGCTTTCCTGGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GILIGNNNCVCYRRTGQLAPGFS*WLSWVL Trigger: CAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGC...TAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000145984.8 |
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| CDS-3UTR CAA 90 bp | TCCCCTTCCCATGCCATAAACAAACTCTATTTCATACTATATCCATGGTATTGCGCGCCTGGGTTTTCTTaGTGGCTTTCCTGGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSHAINKLYFILYPWYCAPGFS*WLSWVL Trigger: CAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGC...GCAATACCATGGATATAGTATGAAATAGAGTTTGTTTATGGCATGGGAAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR CAA 90 bp | ATGATCCTTTGGATTCTAGTTGCAAATTCATCTAAAGGGAGCCAGAGATCTGGCAGCAGACTACAGTTTTaGGAAAGGCAGGACCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MILWILVANSSKGSQRSGSRLQF*ERQDPK Trigger: TTTGGGGTCCTGCCTTTCCAAAAACTGTAGTCTGCT...GCCAGATCTCTGGCTCCCTTTAGATGAATTTGCAACTAGAATCCAAAGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS-3UTR CAA 90 bp | CAACCTTGCACACGAAGTATGCTAGGCATTAAGCTATTCCCCAAACACATAAAGAGCAGACTACAGTTTTaGGAAAGGCAGGACCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QPCTRSMLGIKLFPKHIKSRLQF*ERQDPK Trigger: TTTGGGGTCCTGCCTTTCCAAAAACTGTAGTCTGCT...CTTTATGTGTTTGGGGAATAGCTTAATGCCTAGCATACTTCGTGTGCAAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR CAA 90 bp | TACATTGAGGCAAGTTCTCTAGCTGATCTCACAGACTTGACTGCTCTAGCTGCCGAGAAACAATTCTGGTaGAGATTACTAGAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: YIEASSLADLTDLTALAAEKQFW*RLLEQS Trigger: TGATTGCTCTAGTAATCTCAACCAGAATTGTTTCTC...GGCAGCTAGAGCAGTCAAGTCTGTGAGATCAGCTAGAGAACTTGCCTCAATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145984.8 |
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| CDS-3UTR CAA 90 bp | GGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAAGCAGACTACAGTTTTaGGAAAGGCAGGACCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GILIGNNNCVCYRRTGQLSRLQF*ERQDPK Trigger: TTTGGGGTCCTGCCTTTCCAAAAACTGTAGTCTGCT...TAACTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000145984.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGAATAAAACTATGCAACATTTGAACCTGGCAGACTTCCAGTGCAGGTGTGAGAAACAATTCTGGTaGAGATTACTAGAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SRNKTMQHLNLADFQCRCEKQFW*RLLEQS Trigger: TGATTGCTCTAGTAATCTCAACCAGAATTGTTTCTC...ACACCTGCACTGGAAGTCTGCCAGGTTCAAATGTTGCATAGTTTTATTCCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 |
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| CDS TCA 90 bp | CCAAGATTTTCTCTCCATACCAATGAAATAACAATTGTGAGAATATaGTATCCACTCCTTTGGACAATGAGGACAAGGCTGTGCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRFSLHTNEITIVRI*YPLLWTMRTRLCFG Trigger: TCCAAAGCACAGCCTTGTCCTCATTGTCCAAAGGAGTGGATATCATATTCTCACAATTGTTATTTCATTGGTATGGAGAGAAAATCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112057.9 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 72 bp | TGCCTGCTGGCCTTCAGATGCTTCTGGGAAGCATGTTaGAGGCTAAACTCCAGCAGGCGATCTCCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CLLAFRCFWEAC*RLNSSRRSPAA Trigger: TGCAGCAGGAGATCGCCTGCTGGAGTTTAGCCTTCAACATGCTTCCCAGAAGCATCTGAAGGCCAGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS CAA 72 bp | ATGCCTGCTGGCCTTCAGATGCTTCTGGGAAGCATGTaGAAGGCTAAACTCCAGCAGGCGATCTCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: MPAGLQMLLGSM*KAKLQQAISCC Trigger: GCAGCAGGAGATCGCCTGCTGGAGTTTAGCCTTCAACATGCTTCCCAGAAGCATCTGAAGGCCAGCAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS CCA 72 bp | AACGGAACTGCGCCTGGGTTTTCTTTGTGGCTTTCCTaGGTTCTGAGGCCTGTTCAGTTCCAAGCAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: NGTAPGFSLWLS*VLRPVQFQAGD Trigger: GTCACCTGCTTGGAACTGAACAGGCCTCAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGCAGTTCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS CCA 72 bp | GGCTGTGCTTTGGAGAGCAAGGCGTGTGAGCCTTTCTaGGTTCTAACCAAGAAGGGGTGGATCTGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCALESKACEPF*VLTKKGWICFF Trigger: GAAGAAGCAGATCCACCCCTTCTTGGTTAGAACCCAGAAAGGCTCACACGCCTTGCTCTCCAAAGCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112057.9 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 72 bp | ATGAGGACAAGGCTGTGCTTTGGAGAGCAAGGCGTGTaGGCCTTTCTGGGTTCTAACCAAGAAGGGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: MRTRLCFGEQGV*AFLGSNQEGVD Trigger: ATCCACCCCTTCTTGGTTAGAACCCAGAAAGGCTCACACGCCTTGCTCTCCAAAGCACAGCCTTGTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112057.9 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 72 bp | GATTGCAGAAAATCCTGCTCCTCTTCACTATCTATGTaGAGCAGACTACAGTTTTTGGAAAGGCAGGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: DCRKSCSSSLSM*SRLQFLERQDP Trigger: GGGGTCCTGCCTTTCCAAAAACTGTAGTCTGCTTCACATAGATAGTGAAGAGGAGCAGGATTTTCTGCAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS GCA 72 bp | GAGCCTTTCTGGGTTCTAACCAAGAAGGGGTGGATCTaGTTCTTCAGTTCAGCATATGGAGAAACAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EPFWVLTKKGWI*FFSSAYGETIL Trigger: CAGAATTGTTTCTCCATATGCTGAACTGAAGAAGCAGATCCACCCCTTCTTGGTTAGAACCCAGAAAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112057.9 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS CCA 72 bp | CCTCTTCACTATCTATGTGAAGCAGACTACAGTTTTTaGAAAGGCAGGACCCCAAACTGTCATTCCAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: PLHYLCEADYSF*KGRTPNCHSKI Trigger: AATCTTGGAATGACAGTTTGGGGTCCTGCCTTTCCAAAAACTGTAGTCTGCTTCACATAGATAGTGAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 72 bp | AAAGATATGGATGTAAAGTTGTACAGTTGTCTGCTGTaGGACCAGAAGCTGACATCATGGCACAGTTACATT | + |
|
Preference number: 6 (lower is better) Translates to: KDMDVKLYSCLL*DQKLTSWHSYI Trigger: AATGTAACTGTGCCATGATGTCAGCTTCTGGTCTCACAGCAGACAACTGTACAACTTTACATCCATATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 |
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| CDS CAA 72 bp | TTACACTTACAAAGATATGGATGTAAAGTTGTACAGTaGTCTGCTGTGAGACCAGAAGCTGACATCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHLQRYGCKVVQ*SAVRPEADIMA Trigger: TGCCATGATGTCAGCTTCTGGTCTCACAGCAGACAACTGTACAACTTTACATCCATATCTTTGTAAGTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 |
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| CDS TCA 72 bp | TCTCTCCATACCAATGAAATAACAATTGTGAGAATATaGTATCCACTCCTTTGGACAATGAGGACAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLHTNEITIVRI*YPLLWTMRTRL Trigger: CAGCCTTGTCCTCATTGTCCAAAGGAGTGGATATCATATTCTCACAATTGTTATTTCATTGGTATGGAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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| CDS TCA 72 bp | CCAAACTGTCATTCCAAGATTTTCTCTCCATACCAATaGAATAACAATTGTGAGAATATGATATCCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PNCHSKIFSPYQ*NNNCENMISTP Trigger: AGGAGTGGATATCATATTCTCACAATTGTTATTTCATTGGTATGGAGAGAAAATCTTGGAATGACAGTTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071920.11 ENSMUST00000112057.9 ENSMUST00000118401.8 ENSMUST00000119533.2 ENSMUST00000145984.8 |
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