Pregenerated sensors for KLRC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030167Ensembl transcript IDs: ENSMUST00000032270.13, ENSMUST00000032271.13, ENSMUST00000118447.2, ENSMUST00000169545.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAAAGCTGATGATCCTTTaGATTCTAGTTGCAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: LMILFREECTETSILLNEKLMIL*ILVANS Trigger: TGAATTTGCAACTAGAATCCAAAGGATCATCAGCTT...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| 3UTR TCA 72 bp | ATTTCCTTTGAAAGTCACAATCACTTTTGCCTAGGCTaGGATCAAGACAAAGTTAAACCTGTGCAAACACTG | + |
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Preference number: 3 (lower is better) Translates to: ISFESHNHFCLG*DQDKVKPVQTL Trigger: CAGTGTTTGCACAGGTTTAACTTTGTCTTGATCTCAGCCTAGGCAAAAGTGATTGTGACTTTCAAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGAAAGCTGATGATCCTTaGGATTCTAGTTGCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: KGILIGNNNCVCYRRTGQKADDP*DSSCKF Trigger: GAATTTGCAACTAGAATCCAAAGGATCATCAGCTTT...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| 3UTR TCA 72 bp | GAAGATTCATTGACTGATTCTTTGGTTCATTTCCTTTaGAAGTCACAATCACTTTTGCCTAGGCTGAGATCA | + |
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Preference number: 3 (lower is better) Translates to: EDSLTDSLVHFL*KSQSLLPRLRS Trigger: TGATCTCAGCCTAGGCAAAAGTGATTGTGACTTTCAAAGGAAATGAACCAAAGAATCAGTCAATGAATCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| 3UTR TCA 72 bp | CAAGACAAAGTTAAACCTGTGCAAACACTGGAACTTTaGAAATTATTGTGTACCTTTTTGGGGTTTATTAGG | + |
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Preference number: 3 (lower is better) Translates to: QDKVKPVQTLEL*KLLCTFLGFIR Trigger: CCTAATAAACCCCAAAAAGGTACACAATAATTTTCAAAGTTCCAGTGTTTGCACAGGTTTAACTTTGTCTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTCCAGACCCAGGGCTaGCCTCTGCCCTTCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KGILIGNNNCVCYRRTGQFQTQG*PLPFRR Trigger: CCTTCGGAAGGGCAGAGGTCAGCCCTGGGTCTGGAA...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR GCA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTGCAGGGGCAATTCCTaGAGATCCAGGGATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KGILIGNNNCVCYRRTGQCRGNS*RSRDAP Trigger: AGGAGCATCCCTGGATCTGCAGGAATTGCCCCTGCA...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAGCTGCGAGGACCCCTTaGTTTCCTGTGCTGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNEAARTP*FPVLVP Trigger: AGGAACCAGCACAGGAAACCAAGGGGTCCTCGCAGC...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAACCAGGGTACCAGCAATaGGTTTCTCTGGAGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNEPGYQQ*VSLEEM Trigger: CATCTCCTCCAGAGAAACTCATTGCTGGTACCCTGG...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTTAAGACAAAACAGATaGGGCCCAGGGTACCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KGILIGNNNCVCYRRTGQLRQNR*GPGYQQ Trigger: TTGCTGGTACCCTGGGCCTCATCTGTTTTGTCTTAA...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTACAGTTGTCTGCTGTaGGACCAGAAGCTGACATCA | + |
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Preference number: 4 (lower is better) Translates to: KGILIGNNNCVCYRRTGQYSCLL*DQKLTS Trigger: TGATGTCAGCTTCTGGTCTCACAGCAGACAACTGTA...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CCA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGCTTGGTTTCCTGTGCTaGTTCCTTGAGTTCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KGILIGNNNCVCYRRTGQLGFLC*FLEFFA Trigger: GGCAAAGAACTCAAGGAACCAGCACAGGAAACCAAG...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAATGTGAGACCAGAAGCTaGCATCATGGCACAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNECETRS*HHGTVT Trigger: TGTAACTGTGCCATGATGTCAGCTTCTGGTCTCACA...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR GCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAATGCCACCTTCAGTTCTaGATAGGTGACGCGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNECHLQF*IGDAFI Trigger: AATGAACGCGTCACCTATGCAGAACTGAAGGTGGCA...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAATTTCTCTGGAGGAGATaGAAAACCTTTGCAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNEFLWRR*KTFAGA Trigger: TGCCCCTGCAAAGGTTTTCCATCTCCTCCAGAGAAA...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR GCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAATTGATCTGTGCCTTTaGTTCGGTATATGGTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNEIDLCL*FGIWCG Trigger: GCCACACCATATACCGAAGCAAAGGCACAGATCAAT...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGCTTTGGTTTGAAAATTaGGTCTTCTTTCCAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: KGILIGNNNCVCYRRTGQLWFEN*VFFPDP Trigger: TGGGTCTGGAAAGAAGACTCAATTTTCAAACCAAAG...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR GCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAATCAGTGAAAGAGATTaGAGAAAATCCTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNEISERD*RKSCSS Trigger: AGAGGAGCAGGATTTTCTGCAATCTCTTTCACTGAT...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAAGCAATGAGTTTCTCTaGAGGAGATGGAAAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNESNEFL*RRWKTF Trigger: AAAGGTTTTCCATCTCCTCCAGAGAAACTCATTGCT...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR TCA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAACTGCTATCTTTGGTTTaGAAATTGAGTCTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LMILFREECTETSILLNELLSLV*KLSLLS Trigger: GGAAAGAAGACTCAATTTTCAAACCAAAGATAGCAG...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS CCA 90 bp | ACAGATGAGGCCCAGGGTACCAGCAATGAGTTTCTCTGGAGGAGATaGAAAACCTTTGCAGGGGCAATTCCTGCAGATCCAGGGATGCTC | + |
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Preference number: 5 (lower is better) Translates to: TDEAQGTSNEFLWRR*KTFAGAIPADPGML Trigger: GAGCATCCCTGGATCTGCAGGAATTGCCCCTGCAAAGGTTTTCCATCTCCTCCAGAGAAACTCATTGCTGGTACCCTGGGCCTCATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 |
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| CDS TCA 90 bp | GCTATCTTTGGTTTGAAAATTGAGTCTTCTTTCCAGACCCAGGGCTaGCCTCTGCCCTTCCGAAGGATTCCAGTCCATGAGATCAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: AIFGLKIESSFQTQG*PLPFRRIPVHEISE Trigger: TTCACTGATCTCATGGACTGGAATCCTTCGGAAGGGCAGAGGTCAGCCCTGGGTCTGGAAAGAAGACTCAATTTTCAAACCAAAGATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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| CDS TCA 90 bp | TGGCACAGTTACATTCATCATGGAGAATCTCTGCTATCTTTGGTTTaGAAATTGAGTCTTCTTTCCAGACCCAGGGCTGACCTCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: WHSYIHHGESLLSLV*KLSLLSRPRADLCP Trigger: AGGGCAGAGGTCAGCCCTGGGTCTGGAAAGAAGACTCAATTTTCAAACCAAAGATAGCAGAGATTCTCCATGATGAATGTAACTGTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGTCCTGTGCTGGTTCCTaGAGTTCTTTGCCACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KGILIGNNNCVCYRRTGQSCAGS*SSLPPS Trigger: TGAAGGTGGCAAAGAACTCAAGGAACCAGCACAGGA...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CAA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAGGAGATGGAAAACCTTaGCAGGGGCAATTCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LMILFREECTETSILLNEGDGKP*QGQFLQ Trigger: CTGCAGGAATTGCCCCTGCAAAGGTTTTCCATCTCC...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS CCA 90 bp | GCTGTGAGACCAGAAGCTGACATCATGGCACAGTTACATTCATCATaGAGAATCTCTGCTATCTTTGGTTTGAAAATTGAGTCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AVRPEADIMAQLHSS*RISAIFGLKIESSF Trigger: GAAAGAAGACTCAATTTTCAAACCAAAGATAGCAGAGATTCTCCATGATGAATGTAACTGTGCCATGATGTCAGCTTCTGGTCTCACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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| CDS-3UTR CAA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAGGTTCCTTGAGTTCTTaGCCACCTTCAGTTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LMILFREECTETSILLNEGSLSS*PPSVLH Trigger: ATGCAGAACTGAAGGTGGCAAAGAACTCAAGGAACC...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS GCA 90 bp | GCTCCTCTTCACTATCTATGTAAAGCAGACTACAGTTTTTGGAAATaGAGGACACCAAACTGTCATTCCAAGATTTTCTCTCCATACCAA | + |
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Preference number: 5 (lower is better) Translates to: APLHYLCKADYSFWK*RTPNCHSKIFSPYQ Trigger: TTGGTATGGAGAGAAAATCTTGGAATGACAGTTTGGTGTCCTGCATTTCCAAAAACTGTAGTCTGCTTTACATAGATAGTGAAGAGGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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| CDS CCA 90 bp | AATCCTGCTCCTCTTCACTATCTATGTAAAGCAGACTACAGTTTTTaGAAATGCAGGACACCAAACTGTCATTCCAAGATTTTCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: NPAPLHYLCKADYSF*KCRTPNCHSKIFSP Trigger: TGGAGAGAAAATCTTGGAATGACAGTTTGGTGTCCTGCATTTCCAAAAACTGTAGTCTGCTTTACATAGATAGTGAAGAGGAGCAGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGCTCCTGAGAAGGATTTaGAAAGCTGAAGTCCGAATA | + |
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Preference number: 5 (lower is better) Translates to: KGILIGNNNCVCYRRTGQLLRRI*KAEVRI Trigger: TATTCGGACTTCAGCTTTCAAAATCCTTCTCAGGAG...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CAA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAACTAGTCATTGAGGAATaGATCTGTGCCTTTGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LMILFREECTETSILLNELVIEE*ICAFAS Trigger: CGAAGCAAAGGCACAGATCAATTCCTCAATGACTAG...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CAA 90 bp | CTGATGATTTTGTTCAGAGAAGAATGTACAGAGACTTCCATCCTTCTGAATGAAATGATATCCACTCCTTaGGACAATGAGGACAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LMILFREECTETSILLNEMISTP*DNEDKA Trigger: AGCCTTGTCCTCATTGTCCAAAGGAGTGGATATCAT...TTCATTCAGAAGGATGGAAGTCTCTGTACATTCTTCTCTGAACAAAATCATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS-3UTR CAA 90 bp | AAAGGCATTCTTATAGGTAACAATAACTGTGTTTGTTACCGTCGAACAGGACAGAGCAGACTACAGTTTTaGGAAATGCAGGACACCAAA | + |
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Preference number: 5 (lower is better) Translates to: KGILIGNNNCVCYRRTGQSRLQF*EMQDTK Trigger: TTTGGTGTCCTGCATTTCCAAAAACTGTAGTCTGCT...CTGTCCTGTTCGACGGTAACAAACACAGTTATTGTTACCTATAAGAATGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032270.13 |
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| CDS CCA 72 bp | GAAATGGAGCTGCGAGGACCCCTTGGTTTCCTGTGCTaGTTCCTTGAGTTCTTTGCCACCTTCAGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: EMELRGPLGFLC*FLEFFATFSSA Trigger: TGCAGAACTGAAGGTGGCAAAGAACTCAAGGAACCAGCACAGGAAACCAAGGGGTCCTCGCAGCTCCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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| CDS CCA 72 bp | GCCCAGGGTACCAGCAATGAGTTTCTCTGGAGGAGATaGAAAACCTTTGCAGGGGCAATTCCTGCAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: AQGTSNEFLWRR*KTFAGAIPADP Trigger: TGGATCTGCAGGAATTGCCCCTGCAAAGGTTTTCCATCTCCTCCAGAGAAACTCATTGCTGGTACCCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 |
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| CDS CCA 72 bp | ACAGATGAGGCCCAGGGTACCAGCAATGAGTTTCTCTaGAGGAGATGGAAAACCTTTGCAGGGGCAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: TDEAQGTSNEFL*RRWKTFAGAIP Trigger: AGGAATTGCCCCTGCAAAGGTTTTCCATCTCCTCCAGAGAAACTCATTGCTGGTACCCTGGGCCTCATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 |
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| CDS GCA 72 bp | GTGCCTTTGCTTCGGTATCTTTGCAGGGGCAATTCCTaGAGATCCAGGGATGCTCCTGAGAAGGATTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VPLLRYLCRGNS*RSRDAPEKDFE Trigger: TTCAAAATCCTTCTCAGGAGCATCCCTGGATCTGCAGGAATTGCCCCTGCAAAGATACCGAAGCAAAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169545.8 |
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| CDS CAA 72 bp | ATTGAGGAATTGATCTGTGCCTTTGCTTCGGTATCTTaGCAGGGGCAATTCCTGCAGATCCAGGGATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: IEELICAFASVS*QGQFLQIQGCS Trigger: GGAGCATCCCTGGATCTGCAGGAATTGCCCCTGCAAAGATACCGAAGCAAAGGCACAGATCAATTCCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169545.8 |
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| CDS GCA 72 bp | CACTATCTATGTAAAGCAGACTACAGTTTTTGGAAATaGAGGACACCAAACTGTCATTCCAAGATTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HYLCKADYSFWK*RTPNCHSKIFS Trigger: AGAGAAAATCTTGGAATGACAGTTTGGTGTCCTGCATTTCCAAAAACTGTAGTCTGCTTTACATAGATAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032270.13 ENSMUST00000032271.13 ENSMUST00000118447.2 ENSMUST00000169545.8 |
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