Pregenerated sensors for KLRB1F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030154Ensembl transcript IDs: ENSMUST00000032257.10, ENSMUST00000203059.3, ENSMUST00000204320.2, ENSMUST00000204508.3
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTGGGCCAACAGAATGTTCAGTACAGAGATCCGATGTGGACAGTaGAGTAATCCAGATGAGACTCACAATCAGGAATCAGGACACAGG | + |
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Preference number: 1 (lower is better) Translates to: GWANRMFSTEIRCGQ*SNPDETHNQESGHR Trigger: CCTGTGTCCTGATTCCTGATTGTGAGTCTCATCTGGATTACTTCACTGTCCACATCGGATCTCTGTACTGAACATTCTGTTGGCCCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR CCA 90 bp | GGTAGTGGTGGTGGTGGTATTGTTATAGCTGTACTAACAGGTCACTaGAGAAGAGGACATCCCACTTTCATGCAACTCAGGAGACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GSGGGGIVIAVLTGH*RRGHPTFMQLRRLR Trigger: TCTCAGTCTCCTGAGTTGCATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATACCACCACCACCACTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR CCA 90 bp | GACACAGGCTTTCAGACATGTATCAGGGTCTTTTGGCAGATCCAGTaGTTGTCTGAAGAACAAGAATCTGAAAACACTTCCGTGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: DTGFQTCIRVFWQIQ*LSEEQESENTSVCE Trigger: CTCACACACGGAAGTGTTTTCAGATTCTTGTTCTTCAGACAACCACTGGATCTGCCAAAAGACCCTGATACATGTCTGAAAGCCTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR CCA 90 bp | ATCAGGAATCAGGACACAGGCTTTCAGACATGTATCAGGGTCTTTTaGCAGATCCAGTGGTTGTCTGAAGAACAAGAATCTGAAAACACT | + |
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Preference number: 1 (lower is better) Translates to: IRNQDTGFQTCIRVF*QIQWLSEEQESENT Trigger: AGTGTTTTCAGATTCTTGTTCTTCAGACAACCACTGGATCTGCCAAAAGACCCTGATACATGTCTGAAAGCCTGTGTCCTGATTCCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR TCA 90 bp | GCCCAGAGTCTGCTGGTACATCACCACAAAGTAGTAGGTATCATATaGGTAGAGTTCTGTTTACATAAAGTCACACTCAATGTCGAACAC | + |
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Preference number: 1 (lower is better) Translates to: AQSLLVHHHKVVGII*VEFCLHKVTLNVEH Trigger: GTGTTCGACATTGAGTGTGACTTTATGTAAACAGAACTCTACTCATATGATACCTACTACTTTGTGGTGATGTACCAGCAGACTCTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR GCA 90 bp | GACAAAAAGATCAGCAAGGGCATCACAAGGCCTTCACTGCCTCTTGCTGGTCTGGCCTTCACTGCCTCTTaGTGGTCTGGGCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: DKKISKGITRPSLPLAGLAFTAS*WSGLPS Trigger: AGAAGGAAGCCCAGACCAGCAAGAGGCAGTGAAGGC...CAGACCAGCAAGAGGCAGTGAAGGCCTTGTGATGCCCTTGCTGATCTTTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR GCA 90 bp | CACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTTCACAAGGCCTTCACTaGCTCTTGCTGGTCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HFHATQETEKPHSNGPESSQGLH*LLLVWA Trigger: AGCCCAGACCAGCAAGAGGCAGTGAAGGCCTTGTGA...AGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CCA 90 bp | GCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGCCCAGAGTTTCACTGCCTCTTGCTaGTCTGGGCTTCCTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: ATQETEKPHSNGPESAQSFTASC*SGLPSI Trigger: TATAGAAGGAAGCCCAGACCAGCAAGAGGCAGTGAA...ACTCTGGGCAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR TCA 90 bp | GACAAAAAGATCAGCAAGGGCATCACAAGGCCTTCACTGCCTCTTGCTGGTCTGTCTACAGCCCAAATGTaGAGTAGCTTGAAGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: DKKISKGITRPSLPLAGLSTAQM*SSLKWG Trigger: TCCCCACTTCAAGCTACTTCACATTTGGGCTGTAGA...CAGACCAGCAAGAGGCAGTGAAGGCCTTGTGATGCCCTTGCTGATCTTTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGAAACACTTCCGTGTGTaGGATGATGGCACAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: TFMQLRRLRSPTPMAQNLKHFRV*DDGTAV Trigger: AACAGCTGTGCCATCATCTCACACACGGAAGTGTTT...CAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203059.3 |
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| 3UTR-3UTR GCA 90 bp | GGTAGTGGTGGTGGTGGTATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGATCACAAGGCCTTCACTaGCTCTTGCTGGTCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GSGGGGIVIAVLTGHWRRSQGLH*LLLVWA Trigger: AGCCCAGACCAGCAAGAGGCAGTGAAGGCCTTGTGA...TCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATACCACCACCACCACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGCAACTCGATGCCTGTGGGCAGTaGGAAGAGACAAGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: IAVLTGHWRRGHPTFMQLDACGQ*EETSPC Trigger: ACAGGGACTTGTCTCTTCCCACTGCCCACAGGCATC...GAGTTGCATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR GCA 90 bp | ATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGCAACTCCAATGGCCCAGAATCTaGCCAGAGTCTGCTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: IAVLTGHWRRGHPTFMQLQWPRI*PESAGT Trigger: TGTACCAGCAGACTCTGGGCAGATTCTGGGCCATTG...GAGTTGCATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTTCAATCCGATGTGGACAGTaGAGTAATCCAGATGAGACT | + |
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Preference number: 2 (lower is better) Translates to: ESLFCATSYSLGGPTECSIRCGQ*SNPDET Trigger: AGTCTCATCTGGATTACTTCACTGTCCACATCGGAT...TGAACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCTTTTCATCTCAAGCTCCTTAACTCTGAGCCTCTGCTGTCAGTCAAATAAAGCCTTCACTGCCTCTTaGTGGTCTGGGCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TLFISSSLTLSLCCQSNKAFTAS*WSGLPS Trigger: AGAAGGAAGCCCAGACCAGCAAGAGGCAGTGAAGGC...TTTATTTGACTGACAGCAGAGGCTCAGAGTTAAGGAGCTTGAGATGAAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTTGTATCAGGGTCTTTTaGCAGATCCAGTGGTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LESLFCATSYSLGGPTECCIRVF*QIQWLS Trigger: AGACAACCACTGGATCTGCCAAAAGACCCTGATACA...ACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTTAGACAAAAAGATCAGCAAGGGCATCACAAGGCCTTCACTGCCTCTTGCTATCCGATGTGGACAGTaGAGTAATCCAGATGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: TLDKKISKGITRPSLPLAIRCGQ*SNPDET Trigger: AGTCTCATCTGGATTACTTCACTGTCCACATCGGAT...AGCAAGAGGCAGTGAAGGCCTTGTGATGCCCTTGCTGATCTTTTTGTCTAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTTAGACAAAAAGATCAGCAAGGGCATCACAAGGCCTTCACTGCCTCTTGCTACTCCTCTCCTAGAATaGCACATCTGTGTCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: TLDKKISKGITRPSLPLATPLLE*HICVCV Trigger: TACACAGACACAGATGTGCCATTCTAGGAGAGGAGT...AGCAAGAGGCAGTGAAGGCCTTGTGATGCCCTTGCTGATCTTTTTGTCTAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATACTCCTCTCCTAGAATaGCACATCTGTGTCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: FWSPCFVPLATHWVGQQNTPLLE*HICVCV Trigger: TACACAGACACAGATGTGCCATTCTAGGAGAGGAGT...ATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR TCA 90 bp | GACTCACAATCAGGAATCAGGACACAGGCTTTCAGACATGTATCAGGGTCTTTTCTTCCGTGTGTGAGATaGTGGCACAGCTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: DSQSGIRTQAFRHVSGSFLPCVR*WHSCFL Trigger: AAGAAAACAGCTGTGCCATCATCTCACACACGGAAG...AAAAGACCCTGATACATGTCTGAAAGCCTGTGTCCTGATTCCTGATTGTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR CAA 90 bp | ACAGGCTTTCAGACATGTATCAGGGTCTTTTGGCAGATCCAGTGGTaGTCTGAAGAACAAGAATCTGAAAACACTTCCGTGTGTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: TGFQTCIRVFWQIQW*SEEQESENTSVCEM Trigger: CATCTCACACACGGAAGTGTTTTCAGATTCTTGTTCTTCAGACAACCACTGGATCTGCCAAAAGACCCTGATACATGTCTGAAAGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR TCA 90 bp | AGACTCACAATCAGGAATCAGGACACAGGCTTTCAGACATGTATCAGGGTCTTTATCCGATGTGGACAGTaGAGTAATCCAGATGAGACT | + |
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Preference number: 2 (lower is better) Translates to: RLTIRNQDTGFQTCIRVFIRCGQ*SNPDET Trigger: AGTCTCATCTGGATTACTTCACTGTCCACATCGGAT...AAAGACCCTGATACATGTCTGAAAGCCTGTGTCCTGATTCCTGATTGTGAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGTGGTGGTATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGAGGACAAAAATTAAAATAGGATaGCTGTGGGCAGTGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: WWWWYCYSCTNRSLEKRTKIKIG*LWAVGR Trigger: TCTTCCCACTGCCCACAGGCATCCTATTTTAATTTT...TGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATACCACCACCACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CAA 90 bp | ACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGGGCCTTCACTGCCTCTaGCTGGTCTGGGCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: TFMQLRRLRSPTPMAQNLGLHCL*LVWASF Trigger: GAAGGAAGCCCAGACCAGCAAGAGGCAGTGAAGGCC...CAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR TCA 72 bp | GAAGAGGACATCCCACTTTCATGCAACTCAGGAGACTaGGAAGCCCCACTCCAATGGCCCAGAATCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: EEDIPLSCNSGD*EAPLQWPRICP Trigger: TGGGCAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGTGGGATGTCCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR GCA 72 bp | GATCAGCAAGGGCATCACAAGGCCTTCACTGCCTCTTaGTGGTCTGGGCTTCCTTCTATAGAACTCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: DQQGHHKAFTAS*WSGLPSIELLS Trigger: GGAGAGGAGTTCTATAGAAGGAAGCCCAGACCAGCAAGAGGCAGTGAAGGCCTTGTGATGCCCTTGCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR CCA 72 bp | AGGGCATCACAAGGCCTTCACTGCCTCTTGCTGGTCTaGGCTTCCTTCTATAGAACTCCTCTCCTAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: RASQGLHCLLLV*ASFYRTPLLEW Trigger: CCATTCTAGGAGAGGAGTTCTATAGAAGGAAGCCCAGACCAGCAAGAGGCAGTGAAGGCCTTGTGATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CAA 90 bp | TATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGGCCTTCACTGCCTCTaGCTGGTCTGGGCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: YCYSCTNRSLEKRTSHFHGLHCL*LVWASF Trigger: GAAGGAAGCCCAGACCAGCAAGAGGCAGTGAAGGCC...ATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR CCA 72 bp | TTTTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTaGGTGGGCCAACAGAATGTTCAGTACAGAGATCCG | + |
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Preference number: 3 (lower is better) Translates to: FWSPCFVPLATH*VGQQNVQYRDP Trigger: CGGATCTCTGTACTGAACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR CAA 90 bp | ACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGAAAGTCACAGTGATTTaGGAGTCCTTGTTTTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: TFMQLRRLRSPTPMAQNLKVTVI*ESLFCA Trigger: GGCACAAAACAAGGACTCCAAAATCACTGTGACTTT...CAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR-3UTR CAA 90 bp | AGGAATCAGGACACAGGCTTTCAGACATGTATCAGGGTCTTTTGGCAGATCCAGCTGTTTTCTTTGTCCTaGCCAGTGATTCGTAATAGG | + |
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Preference number: 3 (lower is better) Translates to: RNQDTGFQTCIRVFWQIQLFSLS*PVIRNR Trigger: CCTATTACGAATCACTGGCAAGGACAAAGAAAACAG...CTGGATCTGCCAAAAGACCCTGATACATGTCTGAAAGCCTGTGTCCTGATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR CAA 90 bp | AGTAATCCAGATGAGACTCACAATCAGGAATCAGGACACAGGCTTTCAGACATGAAAGTCACAGTGATTTaGGAGTCCTTGTTTTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: SNPDETHNQESGHRLSDMKVTVI*ESLFCA Trigger: GGCACAAAACAAGGACTCCAAAATCACTGTGACTTT...CATGTCTGAAAGCCTGTGTCCTGATTCCTGATTGTGAGTCTCATCTGGATTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR-3UTR CAA 90 bp | TATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGCACAGCTGTTTTCTTaGTCCTTGCCAGTGATTCGT | + |
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Preference number: 3 (lower is better) Translates to: YCYSCTNRSLEKRTSHFHAQLFS*SLPVIR Trigger: ACGAATCACTGGCAAGGACAAAGAAAACAGCTGTGC...ATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203059.3 |
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| 3UTR TCA 72 bp | TCCTTAACTCTGAGCCTCTGCTGTCAGTCAAATAAATaGCAGCACGACTTTAATCAAGGTTCTACAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: SLTLSLCCQSNK*QHDFNQGSTAQ Trigger: TTGGGCTGTAGAACCTTGATTAAAGTCGTGCTGTCATTTATTTGACTGACAGCAGAGGCTCAGAGTTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| 3UTR TCA 72 bp | AACAGAATGTTCAGTACAGAGATCCGATGTGGACAGTaGAGTAATCCAGATGAGACTCACAATCAGGAATCA | + |
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Preference number: 3 (lower is better) Translates to: NRMFSTEIRCGQ*SNPDETHNQES Trigger: TGATTCCTGATTGTGAGTCTCATCTGGATTACTTCACTGTCCACATCGGATCTCTGTACTGAACATTCTGTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR CCA 72 bp | TTTCAGACATGTATCAGGGTCTTTTGGCAGATCCAGTaGTTGTCTGAAGAACAAGAATCTGAAAACACTTCC | + |
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Preference number: 3 (lower is better) Translates to: FQTCIRVFWQIQ*LSEEQESENTS Trigger: GGAAGTGTTTTCAGATTCTTGTTCTTCAGACAACCACTGGATCTGCCAAAAGACCCTGATACATGTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| 3UTR TCA 72 bp | CTGCTGGTACATCACCACAAAGTAGTAGGTATCATATaGGTAGAGTTCTGTTTACATAAAGTCACACTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LLVHHHKVVGII*VEFCLHKVTLN Trigger: ATTGAGTGTGACTTTATGTAAACAGAACTCTACTCATATGATACCTACTACTTTGTGGTGATGTACCAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS-3UTR TCA 90 bp | GCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGCCCAGAGTTCAGTCCTGTTCTCTTaGGCAGCCACACTGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: ATQETEKPHSNGPESAQSSVLFS*AATLHF Trigger: AAAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGA...ACTCTGGGCAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS-3UTR CCA 90 bp | ACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGGCACCGACAAGCATCTaGGGAGAAAGATGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TFMQLRRLRSPTPMAQNLAPTSI*GERWRR Trigger: TCTTCTCCATCTTTCTCCCCAGATGCTTGTCGGTGC...CAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS-3UTR CCA 90 bp | GCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGCCCAGAGTATCTGGGGAGAAAGATaGAGAAGATGCTTGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: ATQETEKPHSNGPESAQSIWGER*RRCLLI Trigger: TATAAGCAAGCATCTTCTCCATCTTTCTCCCCAGAT...ACTCTGGGCAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS-3UTR TCA 90 bp | CCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTTCAGTACTCAGTCCTGTTCTCTTaGGCAGCCACACTGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: PCFVPLATHWVGQQNVQYSVLFS*AATLHF Trigger: AAAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGA...GTACTGAACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS-3UTR CCA 90 bp | GTGGACAGTGAAGTAATCCAGATGAGACTCACAATCAGGAATCAGGACACAGGCGCACCGACAAGCATCTaGGGAGAAAGATGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VDSEVIQMRLTIRNQDTGAPTSI*GERWRR Trigger: TCTTCTCCATCTTTCTCCCCAGATGCTTGTCGGTGC...GCCTGTGTCCTGATTCCTGATTGTGAGTCTCATCTGGATTACTTCACTGTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| CDS-3UTR CCA 90 bp | ACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGTCGGGCACTCTAGTATaGCTGATCTTCCTGTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: TFMQLRRLRSPTPMAQNLSGTLV*LIFLLV Trigger: AACTAACAGGAAGATCAGCCATACTAGAGTGCCCGA...CAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
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| CDS-3UTR GCA 90 bp | GTGGACAGTGAAGTAATCCAGATGAGACTCACAATCAGGAATCAGGACACAGGCTTGTTCCAGTGTGGATaGCAATATCTCGGGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: VDSEVIQMRLTIRNQDTGLFQCG*QYLGHS Trigger: AGAGTGCCCGAGATATTGGCATCCACACTGGAACAA...GCCTGTGTCCTGATTCCTGATTGTGAGTCTCATCTGGATTACTTCACTGTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
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| CDS-3UTR CCA 90 bp | GACAAAAAGATCAGCAAGGGCATCACAAGGCCTTCACTGCCTCTTGCTGGTCTGTGCTTGCTTATACCCTaGACACCTAAATGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DKKISKGITRPSLPLAGLCLLIP*TPKWLY Trigger: GTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCA...CAGACCAGCAAGAGGCAGTGAAGGCCTTGTGATGCCCTTGCTGATCTTTTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTCATGCAACTCAGGAGACTGAGAAGCCCCACTCCAATGGCCCAGAATCTGTGCTTGCTTATACCCTaGACACCTAAATGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TFMQLRRLRSPTPMAQNLCLLIP*TPKWLY Trigger: GTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCA...CAGATTCTGGGCCATTGGAGTGGGGCTTCTCAGTCTCCTGAGTTGCATGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
||
| CDS-3UTR TCA 90 bp | ATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGCAACTCAAACACTTCCGTGTGTaGGATGATGGCACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IAVLTGHWRRGHPTFMQLKHFRV*DDGTAV Trigger: AACAGCTGTGCCATCATCTCACACACGGAAGTGTTT...GAGTTGCATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR GCA 90 bp | GTGGACAGTGAAGTAATCCAGATGAGACTCACAATCAGGAATCAGGACACAGGCGATGGAGAAGATGCTTaGTTATACCCTGGACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: VDSEVIQMRLTIRNQDTGDGEDA*LYPGHL Trigger: TAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATC...GCCTGTGTCCTGATTCCTGATTGTGAGTCTCATCTGGATTACTTCACTGTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTTCAGGAAAGATGGAGAAGATaGTTGCTTATACCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SPCFVPLATHWVGQQNVQERWRR*LLIPWT Trigger: TGTCCAGGGTATAAGCAAGCATCTTCTCCATCTTTC...CTGAACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTTCACTTGAGCAGCCACACTaGATTTTTCTATTGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESLFCATSYSLGGPTECSLEQPH*IFLLVV Trigger: AACCACCAATAGAAAAATGCAGTGTGGCTGCTCAAG...TGAACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS-3UTR CCA 90 bp | AGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTTCAGTGCTTGCTTATACCCTaGACACCTAAATGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPCFVPLATHWVGQQNVQCLLIP*TPKWLY Trigger: GTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCA...CTGAACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR GCA 90 bp | CTCACAATCAGGAATCAGGACACAGGCTTTCAGACATGTATCAGGGTCTTTTGGGATGGAGAAGATGCTTaGTTATACCCTGGACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LTIRNQDTGFQTCIRVFWDGEDA*LYPGHL Trigger: TAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATC...CCAAAAGACCCTGATACATGTCTGAAAGCCTGTGTCCTGATTCCTGATTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR GCA 90 bp | TTTTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGAAAGATGGAGAAGATaGTTGCTTATACCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FWSPCFVPLATHWVGQQNERWRR*LLIPWT Trigger: TGTCCAGGGTATAAGCAAGCATCTTCTCCATCTTTC...ATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGGTGGTGGTGGTATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGATGTATCAGGGTCTTTTaGCAGATCCAGTGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGGGGIVIAVLTGHWRRCIRVF*QIQWLS Trigger: AGACAACCACTGGATCTGCCAAAAGACCCTGATACA...TCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATACCACCACCACCACTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR GCA 90 bp | ACCCTTTTCATCTCAAGCTCCTTAACTCTGAGCCTCTGCTGTCAGTCAAATAAAGATGGAGAAGATGCTTaGTTATACCCTGGACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLFISSSLTLSLCCQSNKDGEDA*LYPGHL Trigger: TAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATC...TTTATTTGACTGACAGCAGAGGCTCAGAGTTAAGGAGCTTGAGATGAAAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGGTGGTATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGAGGACAATCTGGGGAGAAAGATaGAGAAGATGCTTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: WWWWYCYSCTNRSLEKRTIWGER*RRCLLI Trigger: TATAAGCAAGCATCTTCTCCATCTTTCTCCCCAGAT...TGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATACCACCACCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
||
| 3UTR CAA 72 bp | ACTTCCGTGTGTGAGATGATGGCACAGCTGTTTTCTTaGTCCTTGCCAGTGATTCGTAATAGGTTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSVCEMMAQLFS*SLPVIRNRLGF Trigger: AAATCCTAACCTATTACGAATCACTGGCAAGGACAAAGAAAACAGCTGTGCCATCATCTCACACACGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTCTTTTGGCAGATCCAGTGGTTGTCTGAAGAACAAGAATCTGAAAACACTTGAGCAGCCACACTaGATTTTTCTATTGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRSSGCLKNKNLKTLEQPH*IFLLVV Trigger: AACCACCAATAGAAAAATGCAGTGTGGCTGCTCAAG...TGTTTTCAGATTCTTGTTCTTCAGACAACCACTGGATCTGCCAAAAGACCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203059.3 |
||
| CDS-3UTR CCA 90 bp | TTAGGATTTAAAATAGAGCCATCTATCCACTTCCAGATCTTCTCCTTCTGTACAGCACCGACAAGCATCTaGGGAGAAAGATGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGFKIEPSIHFQIFSFCTAPTSI*GERWRR Trigger: TCTTCTCCATCTTTCTCCCCAGATGCTTGTCGGTGC...TGTACAGAAGGAGAAGATCTGGAAGTGGATAGATGGCTCTATTTTAAATCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTACATAAAGTCACACTCAATGTCGAACACAGCATTAGTCCATTATTAGTCCTTCCGTGTGTGAGATaGTGGCACAGCTGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLHKVTLNVEHSISPLLVLPCVR*WHSCFL Trigger: AAGAAAACAGCTGTGCCATCATCTCACACACGGAAG...GACTAATAATGGACTAATGCTGTGTTCGACATTGAGTGTGACTTTATGTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTACATAAAGTCACACTCAATGTCGAACACAGCATTAGTCCATTATTAGTCCCCTTTATCAAGTTCTaGACAAATCTCAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLHKVTLNVEHSISPLLVPFIKF*TNLSSS Trigger: AGAAGAACTGAGATTTGTGCAGAACTTGATAAAGGG...GACTAATAATGGACTAATGCTGTGTTCGACATTGAGTGTGACTTTATGTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS TCA 90 bp | AAGAGAAGAAGGATCAGCCCAGCACAGCCAGATTTCAGAGCCAAATaGTGCCAGTGTGGGCACCGACAAGCATCTGGGGAGAAAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: KRRRISPAQPDFRAK*CQCGHRQASGEKDG Trigger: TCCATCTTTCTCCCCAGATGCTTGTCGGTGCCCACACTGGCATCATTTGGCTCTGAAATCTGGCTGTGCTGGGCTGATCCTTCTTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204320.2 ENSMUST00000204508.3 |
||
| CDS GCA 90 bp | TGTGGGCACCGACAAGCATCTGGGGAGAAAGATGGAGAAGATGCTTaGTTATACCCTGGACACCTAAATGGCTTTACATTGCCATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: CGHRQASGEKDGEDA*LYPGHLNGFTLPWT Trigger: GGTCCATGGCAATGTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATCTTTCTCCCCAGATGCTTGTCGGTGCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204320.2 ENSMUST00000204508.3 |
||
| CDS GCA 90 bp | CCAGTGTGGGCACCGACAAGCATCTGGGGAGAAAGATGGAGAAGATaGTTGCTTATACCCTGGACACCTAAATGGCTTTACATTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PVWAPTSIWGERWRR*LLIPWTPKWLYIAM Trigger: CATGGCAATGTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATCTTTCTCCCCAGATGCTTGTCGGTGCCCACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204320.2 ENSMUST00000204508.3 |
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| CDS CCA 90 bp | CAAATGATGCCAGTGTGGGCACCGACAAGCATCTGGGGAGAAAGATaGAGAAGATGCTTGCTTATACCCTGGACACCTAAATGGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: QMMPVWAPTSIWGER*RRCLLIPWTPKWLY Trigger: GTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATCTTTCTCCCCAGATGCTTGTCGGTGCCCACACTGGCATCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204320.2 ENSMUST00000204508.3 |
||
| CDS-3UTR CAA 90 bp | GTGATTTTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGCACAGCTGTTTTCTTaGTCCTTGCCAGTGATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VILESLFCATSYSLGGPTAQLFS*SLPVIR Trigger: ACGAATCACTGGCAAGGACAAAGAAAACAGCTGTGC...TGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAAAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR CAA 90 bp | GTGGACAGTGAAGTAATCCAGATGAGACTCACAATCAGGAATCAGGACACAGGCTTCAGTCCTGTTCTCTaGAGCAGCCACACTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VDSEVIQMRLTIRNQDTGFSPVL*SSHTAF Trigger: AAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGAA...GCCTGTGTCCTGATTCCTGATTGTGAGTCTCATCTGGATTACTTCACTGTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS CCA 90 bp | AACATTTGTTCCAGTGTGGATGCCAATATCTCGGGCACTCTAGTATaGCTGATCTTCCTGTTAGTTCAGTCCTGTTCTCTTGAGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NICSSVDANISGTLV*LIFLLVQSCSLEQP Trigger: TGGCTGCTCAAGAGAACAGGACTGAACTAACAGGAAGATCAGCCATACTAGAGTGCCCGAGATATTGGCATCCACACTGGAACAAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR CAA 90 bp | GTGATTTTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACACTAAATGGCTTTACATaGCCATGGACCTTTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VILESLFCATSYSLGGPTLNGFT*PWTFDV Trigger: CACATCAAAGGTCCATGGCAATGTAAAGCCATTTAG...TGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
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| CDS-3UTR CAA 90 bp | TTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTCTAAATGGCTTTACATaGCCATGGACCTTTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LESLFCATSYSLGGPTECLNGFT*PWTFDV Trigger: CACATCAAAGGTCCATGGCAATGTAAAGCCATTTAG...ACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR CAA 90 bp | TTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATGTCTGTTTTCTTTGTCCTaGCCAGTGATTCGTAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LESLFCATSYSLGGPTECLFSLS*PVIRNR Trigger: CCTATTACGAATCACTGGCAAGGACAAAGAAAACAG...ACATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGCAACTCTGGCAGATCCAGTGGTaGTCTGAAGAACAAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: IAVLTGHWRRGHPTFMQLWQIQW*SEEQES Trigger: AGATTCTTGTTCTTCAGACAACCACTGGATCTGCCA...GAGTTGCATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS GCA 90 bp | GCCCAAGGTCTGTTAGTTCAGTCCTGTTCTCTTGAGCAGCCACACTaGATTTTTCTATTGGTGGTTTTTGCACTAGGAATCTCACTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQGLLVQSCSLEQPH*IFLLVVFALGISLR Trigger: TCTTAGTGAGATTCCTAGTGCAAAAACCACCAATAGAAAAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGAACTAACAGACCTTGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203059.3 |
||
| CDS-3UTR CAA 90 bp | TTTTGGAGTCCTTGTTTTGTGCCACTAGCTACTCACTGGGTGGGCCAACAGAATCACTGCATTTTTCTATaGGTGGTTTTTGCACTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FWSPCFVPLATHWVGQQNHCIFL*VVFALG Trigger: TCCTAGTGCAAAAACCACCAATAGAAAAATGCAGTG...ATTCTGTTGGCCCACCCAGTGAGTAGCTAGTGGCACAAAACAAGGACTCCAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
||
| CDS-3UTR CAA 90 bp | TATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATTTCAGTCCTGTTCTCTaGAGCAGCCACACTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YCYSCTNRSLEKRTSHFHFSPVL*SSHTAF Trigger: AAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGAA...ATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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| CDS GCA 90 bp | CTGATCTTCCTGTTAGTTCAGTCCTGTTCTCTTGAGCAGCCACACTaGATTTTTCTATTGGTGGTTTTTGCACTAGGAATCTCACTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LIFLLVQSCSLEQPH*IFLLVVFALGISLR Trigger: TCTTAGTGAGATTCCTAGTGCAAAAACCACCAATAGAAAAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGAACTAACAGGAAGATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR CAA 90 bp | ATGATGGCACAGCTGTTTTCTTTGTCCTTGCCAGTGATTCGTAATAGGTTAGGACTAAATGGCTTTACATaGCCATGGACCTTTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: MMAQLFSLSLPVIRNRLGLNGFT*PWTFDV Trigger: CACATCAAAGGTCCATGGCAATGTAAAGCCATTTAG...TCCTAACCTATTACGAATCACTGGCAAGGACAAAGAAAACAGCTGTGCCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203059.3 ENSMUST00000204508.3 |
||
| CDS-3UTR CAA 90 bp | TATTGTTATAGCTGTACTAACAGGTCACTGGAGAAGAGGACATCCCACTTTCATGAAACAAATAAACATTaGTTCCAGTGTGGATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YCYSCTNRSLEKRTSHFHETNKH*FQCGCQ Trigger: TTGGCATCCACACTGGAACAAATGTTTATTTGTTTC...ATGAAAGTGGGATGTCCTCTTCTCCAGTGACCTGTTAGTACAGCTATAACAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS-3UTR CAA 90 bp | TGTTTACATAAAGTCACACTCAATGTCGAACACAGCATTAGTCCATTATTAGTCCACTGCATTTTTCTATaGGTGGTTTTTGCACTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLHKVTLNVEHSISPLLVHCIFL*VVFALG Trigger: TCCTAGTGCAAAAACCACCAATAGAAAAATGCAGTG...GACTAATAATGGACTAATGCTGTGTTCGACATTGAGTGTGACTTTATGTAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
||
| CDS TCA 72 bp | AGGATCAGCCCAGCACAGCCAGATTTCAGAGCCAAATaGTGCCAGTGTGGGCACCGACAAGCATCTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RISPAQPDFRAK*CQCGHRQASGE Trigger: CTCCCCAGATGCTTGTCGGTGCCCACACTGGCATCATTTGGCTCTGAAATCTGGCTGTGCTGGGCTGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204320.2 ENSMUST00000204508.3 |
||
| CDS CCA 72 bp | TCCAGTGTGGATGCCAATATCTCGGGCACTCTAGTATaGCTGATCTTCCTGTTAGTTCAGTCCTGTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSVDANISGTLV*LIFLLVQSCSL Trigger: AAGAGAACAGGACTGAACTAACAGGAAGATCAGCCATACTAGAGTGCCCGAGATATTGGCATCCACACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032257.10 |
||
| CDS CCA 72 bp | TGGGGAGAAAGATGGAGAAGATGCTTGCTTATACCCTaGACACCTAAATGGCTTTACATTGCCATGGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: WGERWRRCLLIP*TPKWLYIAMDL Trigger: AAGGTCCATGGCAATGTAAAGCCATTTAGGTGTCCAGGGTATAAGCAAGCATCTTCTCCATCTTTCTCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 ENSMUST00000204320.2 ENSMUST00000204508.3 |
||
| CDS GCA 72 bp | CTGTTAGTTCAGTCCTGTTCTCTTGAGCAGCCACACTaGATTTTTCTATTGGTGGTTTTTGCACTAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: LLVQSCSLEQPH*IFLLVVFALGI Trigger: GATTCCTAGTGCAAAAACCACCAATAGAAAAATGCAGTGTGGCTGCTCAAGAGAACAGGACTGAACTAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032257.10 ENSMUST00000203059.3 |
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