Pregenerated sensors for KLRB1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030325Ensembl transcript IDs: ENSMUST00000167691.9, ENSMUST00000172601.8, ENSMUST00000174404.8, ENSMUST00000174865.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTaGGTGTCTGCCAAAAAGGCACAGCTCTACAAGACTGAGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: KGIQNLLHVLGDLGY*VSAKKAQLYKTEGQ Trigger: CTGCCCCTCAGTCTTGTAGAGCTGTGCCTTTTTGGCAGACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CCA 90 bp | GTGACCTATCTTTCTAAGAAATTAGATCCAGTCTTCCATGGCTGTTaGCAGAGGAGCTCAGGCACAGAGACCAGCAAATGTCACACAGAC | + |
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Preference number: 1 (lower is better) Translates to: VTYLSKKLDPVFHGC*QRSSGTETSKCHTD Trigger: GTCTGTGTGACATTTGCTGGTCTCTGTGCCTGAGCTCCTCTGCCAACAGCCATGGAAGACTGGATCTAATTTCTTAGAAAGATAGGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CCA 90 bp | AAACCAAAGAAGAATGCAAGGGTATCCAGAATCTCCTACATGTTCTaGGAGACCTGGGATATTGAGTGTCTGCCAAAAAGGCACAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KPKKNARVSRISYMF*ETWDIECLPKRHSS Trigger: AGAGCTGTGCCTTTTTGGCAGACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR GCA 90 bp | CAGTATGTAGATGATCTTTTAGTTGCAGCAGAAACCAAAGAAGAATaGAAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QYVDDLLVAAETKEE*KGIQNLLHVLGDLG Trigger: TCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTTCTGCTGCAACTAAAAGATCATCTACATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR TCA 90 bp | CATAGAACTCTTCTCTTAGAATGGCACAACTGTGTCTGTGTACACTaGCATTTACACACTTTACACAATCAAGAATCTGTAAGAGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: HRTLLLEWHNCVCVH*HLHTLHNQESVRGP Trigger: TGGGCCTCTTACAGATTCTTGATTGTGTAAAGTGTGTAAATGTCAGTGTACACAGACACAGTTGTGCCATTCTAAGAGAAGAGTTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
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| 3UTR GCA 90 bp | TCTACCTTCAGATCGGAAATGGTATTCTGTTTTGGATCTAAAGAATaGTTTCTTCAGCTTACCTTTGGCTTCCAAAAGCCAGAAATACTT | + |
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Preference number: 1 (lower is better) Translates to: STFRSEMVFCFGSKE*FLQLTFGFQKPEIL Trigger: AAGTATTTCTGGCTTTTGGAAGCCAAAGGTAAGCTGAAGAAAGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCTGAAGGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR CCA 90 bp | CCGAACAAGACCTGGATGCCTGGCTGGCAGAGTTTCCCCAGGCATGGGCAGAGAAATGGACAACTCACCTaGACCTGCCTGCCTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PNKTWMPGWQSFPRHGQRNGQLT*TCLPQD Trigger: ATCTTGAGGCAGGCAGGTCCAGGTGAGTTGTCCATT...TCTCTGCCCATGCCTGGGGAAACTCTGCCAGCCAGGCATCCAGGTCTTGTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR TCA 90 bp | AAGACCTGGATGCCTGGCTGGCAGAGTTTCCCCAGGCATGGGCAGAGACTGGAGCCCCATTATTGTCTGTaGAAAAGCCAAAGTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: KTWMPGWQSFPRHGQRLEPHYCL*KSQSPM Trigger: CATTGGACTTTGGCTTTTTCACAGACAATAATGGGG...CTCCAGTCTCTGCCCATGCCTGGGGAAACTCTGCCAGCCAGGCATCCAGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGGGCAGCAGTAGCGTTCCACAGCAAGAAAAGAGACTGTCTTCAGCATACAGGATTAGAATCCAGTaGCCTCAGCTACCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LRGSSSVPQQEKRLSSAYRIRIQ*PQLPGL Trigger: AAGCCCTGGTAGCTGAGGGCACTGGATTCTAATCCT...GTATGCTGAAGACAGTCTCTTTTCTTGCTGTGGAACGCTACTGCTGCCCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCTCTACAAGACTGAGGGGCAGCAGTAGCGTTCCACAGCAAGAAAAGAGAAAACTTTGGGAGCCATaGAAGCAGCCTGTGACCTAT | + |
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Preference number: 2 (lower is better) Translates to: HSSTRLRGSSSVPQQEKRKLWEP*KQPVTY Trigger: ATAGGTCACAGGCTGCTTTCATGGCTCCCAAAGTTT...TCTCTTTTCTTGCTGTGGAACGCTACTGCTGCCCCTCAGTCTTGTAGAGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGCCAAAATGGGAGCTCAGATTCATTTTGACCCTGGGAAAGTCCAGCTGACAGAGTTTCCCCAGGCATaGGCAGAGACTGGAGATATG | + |
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Preference number: 2 (lower is better) Translates to: LAKMGAQIHFDPGKVQLTEFPQA*AETGDM Trigger: CATATCTCCAGTCTCTGCCCATGCCTGGGGAAACTC...TGTCAGCTGGACTTTCCCAGGGTCAAAATGAATCTGAGCTCCCATTTTGGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAAACCAAAGAAGAATGCAAGGGTATCCAGAATCTCCTACATGTTCTGGACAGCTCTACAAGACTaGGGGGCAGCAGTAGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: QQKPKKNARVSRISYMFWTALQD*GAAVAF Trigger: GAACGCTACTGCTGCCCCTCAGTCTTGTAGAGCTGT...CCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTTCTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTGAGTGTCGGGTCCACAGGCTTTTaGAGATTATGGACTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: QGYPESPTCSGRPGILSVGSTGF*RLWTPG Trigger: ACCTGGAGTCCATAATCTGCAAAAGCCTGTGGACCC...GACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAGGAATAGCCAAAGGGGTCCTGACTCAAACTTTGGGAGCCATGAAAGCATGTGTCTGTGTACACTaGCATTTACACACTTTACAC | + |
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Preference number: 2 (lower is better) Translates to: WKGIAKGVLTQTLGAMKACVCVH*HLHTLH Trigger: GTGTAAAGTGTGTAAATGTCAGTGTACACAGACACA...TGCTTTCATGGCTCCCAAAGTTTGAGTCAGGACCCCTTTGGCTATTCCTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTCTACCTTCAGATCGGAAATGGTATTCTGTTTTGGATCTAAAGAATGCTAGGATTAGAATCCAGTaGCCTCAGCTACCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLPSDRKWYSVLDLKNARIRIQ*PQLPGL Trigger: AAGCCCTGGTAGCTGAGGGCACTGGATTCTAATCCT...AGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCTGAAGGTAGAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAACCAAAGAAGAATGCAAGGGTATCCAGAATCTCCTACATGTTCTGGGGGCTTTTGCAGATTATaGACTCCAGGTTTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: SRNQRRMQGYPESPTCSGGFCRL*TPGFTE Trigger: TTCAGTGAAACCTGGAGTCCATAATCTGCAAAAGCC...CCCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTTCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CAA 90 bp | ACCCTGTTGAGCTCTCTACCTTCAGATCGGAAATGGTATTCTGTTTaGGATCTAAAGAATGCTTTCTTCAGCTTACCTTTGGCTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: TLLSSLPSDRKWYSV*DLKNAFFSLPLASK Trigger: TTTGGAAGCCAAAGGTAAGCTGAAGAAAGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCTGAAGGTAGAGAGCTCAACAGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CAA 90 bp | ATGCTTTCTTCAGCTTACCTTTGGCTTCCAAAAGCCAGAAATACTTaGCATTTGAGTGGCATGATTCTGAAAGTGGCATTAATGGACAAC | + |
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Preference number: 2 (lower is better) Translates to: MLSSAYLWLPKARNT*HLSGMILKVALMDN Trigger: GTTGTCCATTAATGCCACTTTCAGAATCATGCCACTCAAATGCAAAGTATTTCTGGCTTTTGGAAGCCAAAGGTAAGCTGAAGAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CAA 90 bp | TGGTATTCTGTTTTGGATCTAAAGAATGCTTTCTTCAGCTTACCTTaGGCTTCCAAAAGCCAGAAATACTTTGCATTTGAGTGGCATGAT | + |
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Preference number: 2 (lower is better) Translates to: WYSVLDLKNAFFSLP*ASKSQKYFAFEWHD Trigger: ATCATGCCACTCAAATGCAAAGTATTTCTGGCTTTTGGAAGCCAAAGGTAAGCTGAAGAAAGCATTCTTTAGATCCAAAACAGAATACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CCA 72 bp | GAGTCACCAGCCAGCCCCGAACAAGACCTGGATGCCTaGCTGGCAGAGTTTCCCCAGGCATGGGCAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: ESPASPEQDLDA*LAEFPQAWAET Trigger: AGTCTCTGCCCATGCCTGGGGAAACTCTGCCAGCCAGGCATCCAGGTCTTGTTCGGGGCTGGCTGGTGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CCA 72 bp | GACTATACGAGTCACCAGCCAGCCCCGAACAAGACCTaGATGCCTGGCTGGCAGAGTTTCCCCAGGCATGGG | + |
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Preference number: 3 (lower is better) Translates to: DYTSHQPAPNKT*MPGWQSFPRHG Trigger: CCCATGCCTGGGGAAACTCTGCCAGCCAGGCATCCAGGTCTTGTTCGGGGCTGGCTGGTGACTCGTATAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CCA 72 bp | GACCTGGATGCCTGGCTGGCAGAGTTTCCCCAGGCATaGGCAGAGACTGGAGATATGAGGCTGGTAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: DLDAWLAEFPQA*AETGDMRLVKH Trigger: ATGTTTTACCAGCCTCATATCTCCAGTCTCTGCCCATGCCTGGGGAAACTCTGCCAGCCAGGCATCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR GCA 72 bp | GAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTaGTGTGCCACTAACTGCACTGGGAGGCAGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: ESVRGPVLSESM*CATNCTGRQTA Trigger: TGCTGTCTGCCTCCCAGTGCAGTTAGTGGCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGGAGCTCAGATTCATTTTGACCCTGGGAAAGTCCAGCTGACAGACGGAAACAGTCTTCCATGGCTGTaGGCAGAGGAGCTCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: MGAQIHFDPGKVQLTDGNSLPWL*AEELRH Trigger: GTGCCTGAGCTCCTCTGCCAACAGCCATGGAAGACT...GTTTCCGTCTGTCAGCTGGACTTTCCCAGGGTCAAAATGAATCTGAGCTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTGAGTGTCAGTCTTCCATGGCTGTaGGCAGAGGAGCTCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: QGYPESPTCSGRPGILSVSLPWL*AEELRH Trigger: GTGCCTGAGCTCCTCTGCCAACAGCCATGGAAGACT...GACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CCA 72 bp | GTATTTGTAGAGCTCAAGCCAAGAGCAGACCCAGTATaGGTCATGCCCCAGGAAACATGGAAGGGGATCACT | + |
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Preference number: 3 (lower is better) Translates to: VFVELKPRADPV*VMPQETWKGIT Trigger: AGTGATCCCCTTCCATGTTTCCTGGGGCATGACCCATACTGGGTCTGCTCTTGGCTTGAGCTCTACAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGGGCAGCAGTAGCGTTCCACAGCAAGAAAAGAGACTGTCTTCAGCATACGCTACCAGGGCTTCTTaGCATAGAACTCTTCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LRGSSSVPQQEKRLSSAYATRAS*HRTLLL Trigger: TAAGAGAAGAGTTCTATGCAAAGAAGCCCTGGTAGC...GTATGCTGAAGACAGTCTCTTTTCTTGCTGTGGAACGCTACTGCTGCCCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTGAGTGTCCAGGTAAGAGAATTCTaGGGGTCCACAGGCTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: QGYPESPTCSGRPGILSVQVREF*GSTGFC Trigger: GCAAAAGCCTGTGGACCCCAAGAATTCTCTTACCTG...GACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CCA 72 bp | AGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTaGGATATTGAGTGTCTGCCAAAAAGGCACAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RVSRISYMFWET*DIECLPKRHSS Trigger: AGAGCTGTGCCTTTTTGGCAGACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTAAGAAATTAGATCCAGTCTTCCATGGCTGTTGGCAGAGGAGCTCAGGCGCTACCAGGGCTTCTTaGCATAGAACTCTTCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LSKKLDPVFHGCWQRSSGATRAS*HRTLLL Trigger: TAAGAGAAGAGTTCTATGCAAAGAAGCCCTGGTAGC...GCCTGAGCTCCTCTGCCAACAGCCATGGAAGACTGGATCTAATTTCTTAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR TCA 72 bp | CAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTaGGTGTCTGCCAAAAAGGCACAGCTCTACAAGACT | + |
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Preference number: 3 (lower is better) Translates to: QNLLHVLGDLGY*VSAKKAQLYKT Trigger: AGTCTTGTAGAGCTGTGCCTTTTTGGCAGACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CCA 72 bp | CTTTCTAAGAAATTAGATCCAGTCTTCCATGGCTGTTaGCAGAGGAGCTCAGGCACAGAGACCAGCAAATGT | + |
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Preference number: 3 (lower is better) Translates to: LSKKLDPVFHGC*QRSSGTETSKC Trigger: ACATTTGCTGGTCTCTGTGCCTGAGCTCCTCTGCCAACAGCCATGGAAGACTGGATCTAATTTCTTAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR TCA 72 bp | ACCCTGTCTAGGATCTACTGGAAGTTAACTGCGGGGTaGTGTACATACACCCAAAAGTGCCTAACCCTTATA | + |
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Preference number: 3 (lower is better) Translates to: TLSRIYWKLTAG*CTYTQKCLTLI Trigger: TATAAGGGTTAGGCACTTTTGGGTGTATGTACATCACCCCGCAGTTAACTTCCAGTAGATCCTAGACAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR TCA 72 bp | AGATTTACTAGCCAAAATGGGAGCTCAGATTCATTTTaGCCCTGGGAAAGTCCAGCTGACAGACGGAAACAG | + |
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Preference number: 3 (lower is better) Translates to: RFTSQNGSSDSF*PWESPADRRKQ Trigger: CTGTTTCCGTCTGTCAGCTGGACTTTCCCAGGGTCAAAATGAATCTGAGCTCCCATTTTGGCTAGTAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR-3UTR CAA 90 bp | AGCTCTCTACCTTCAGATCGGAAATGGTATTCTGTTTTGGATCTAAAGAATGCTGTCCTGACTCAAACTTaGGGAGCCATGAAAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSLPSDRKWYSVLDLKNAVLTQT*GAMKAA Trigger: GGCTGCTTTCATGGCTCCCAAAGTTTGAGTCAGGAC...AGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCTGAAGGTAGAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR TCA 72 bp | ACCAGACATCACAAAACCATTTCACTTGTAGGTCGATaGGTCAACGAATGGAAAGGAATAGCCAAAGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: TRHHKTISLVGR*VNEWKGIAKGV Trigger: GACCCCTTTGGCTATTCCTTTCCATTCGTTGACTCATCGACCTACAAGTGAAATGGTTTTGTGATGTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR GCA 72 bp | AGACAGGTAAGAGAATTCTTGGGGTCCACAGGCTTTTaGAGATTATGGACTCCAGGTTTCACTGAAATAGTC | + |
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Preference number: 3 (lower is better) Translates to: RQVREFLGSTGF*RLWTPGFTEIV Trigger: GACTATTTCAGTGAAACCTGGAGTCCATAATCTGCAAAAGCCTGTGGACCCCAAGAATTCTCTTACCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAAGAACAAAAATGGGAAGACTCCAAGCCTTTAAAGCTTCTCTATCCTATCCAGGTAAGAGAATTCTaGGGGTCCACAGGCTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: SKEQKWEDSKPLKLLYPIQVREF*GSTGFC Trigger: GCAAAAGCCTGTGGACCCCAAGAATTCTCTTACCTG...GATAGGATAGAGAAGCTTTAAAGGCTTGGAGTCTTCCCATTTTTGTTCTTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CCA 72 bp | GAAACCATGCCTGCTCTGATGTCAAAAGAACAAAAATaGGAAGACTCCAAGCCTTTAAAGCTTCTCTATCCT | + |
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Preference number: 3 (lower is better) Translates to: ETMPALMSKEQK*EDSKPLKLLYP Trigger: AGGATAGAGAAGCTTTAAAGGCTTGGAGTCTTCCCATTTTTGTTCTTTTGACATCAGAGCAGGCATGGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR GCA 72 bp | AGATCGGAAATGGTATTCTGTTTTGGATCTAAAGAATaGTTTCTTCAGCTTACCTTTGGCTTCCAAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RSEMVFCFGSKE*FLQLTFGFQKP Trigger: TGGCTTTTGGAAGCCAAAGGTAAGCTGAAGAAAGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CCA 72 bp | TATACCCTGTTGAGCTCTCTACCTTCAGATCGGAAATaGTATTCTGTTTTGGATCTAAAGAATGCTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: YTLLSSLPSDRK*YSVLDLKNAFF Trigger: GAAGAAAGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCTGAAGGTAGAGAGCTCAACAGGGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| 3UTR CCA 72 bp | GTAGTCTGGAAAGATTTTATTGTCAACCCACCACCTTaGGTGAAATCCTTTTTATTATCCCTGATTAACGCT | + |
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Preference number: 3 (lower is better) Translates to: VVWKDFIVNPPP*VKSFLLSLINA Trigger: AGCGTTAATCAGGGATAATAAAAAGGATTTCACCCAAGGTGGTGGGTTGACAATAAAATCTTTCCAGACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
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| CDS-3UTR GCA 90 bp | CTGAGGGGCAGCAGTAGCGTTCCACAGCAAGAAAAGAGACTGTCTTCAGCATACGATGGGGGTGACTCATaGCAAGCCCCCAGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRGSSSVPQQEKRLSSAYDGGDS*QAPSVL Trigger: CAGGACACTGGGGGCTTGGCATGAGTCACCCCCATC...GTATGCTGAAGACAGTCTCTTTTCTTGCTGTGGAACGCTACTGCTGCCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| CDS-3UTR GCA 90 bp | CACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCCGATGGGGGTGACTCATaGCAAGCCCCCAGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HNQESVRGPVLSESMCCADGGDS*QAPSVL Trigger: CAGGACACTGGGGGCTTGGCATGAGTCACCCCCATC...GGCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
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| CDS-3UTR GCA 90 bp | ACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCGATGGGGGTGACTCATaGCAAGCCCCCAGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TQSRICKRPSAFRVHVLCDGGDS*QAPSVL Trigger: CAGGACACTGGGGGCTTGGCATGAGTCACCCCCATC...GCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGACAGCAGAGACAGGTTAGGTGCAGAGATCTGGTGCGGATGGTAAAAAAAGAAAGTCCTCTGTaGATGCTCTGCTCTGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GGRQQRQVRCRDLVRMVKKESPL*MLCSVP Trigger: GGGAACAGAGCAGAGCATTCACAGAGGACTTTCTTT...TTTTACCATCCGCACCAGATCTCTGCACCTAACCTGTCTCTGCTGTCTGCCTCC 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
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| 3UTR CAA 72 bp | ACATGGAAGGGGATCACTCCCCATATCAAGAAACTGTaGGCCTTGGGAGTCCTTAGGGCATGTCAGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TWKGITPHIKKL*ALGVLRACQSV Trigger: GACTGACTGACATGCCCTAAGGACTCCCAAGGCCAACAGTTTCTTGATATGGGGAGTGATCCCCTTCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGGAATAGCCAAAGGGGTCCTGACTCAAACTTTGGGAGCCATGAAAGCATGTTCCCACACCCACTaGTTCCTGTCTCTGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WKGIAKGVLTQTLGAMKACSHTH*FLSLRV Trigger: AACCCTCAGAGACAGGAATCAGTGGGTGTGGGAACA...TGCTTTCATGGCTCCCAAAGTTTGAGTCAGGACCCCTTTGGCTATTCCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAGAAATTAGATCCAGTCTTCCATGGCTGTTGGCAGAGGAGCTCAGGCACATGTTCCCACACCCACTaGTTCCTGTCTCTGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKKLDPVFHGCWQRSSGTCSHTH*FLSLRV Trigger: AACCCTCAGAGACAGGAATCAGTGGGTGTGGGAACA...TGTGCCTGAGCTCCTCTGCCAACAGCCATGGAAGACTGGATCTAATTTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGGAATAGCCAAAGGGGTCCTGACTCAAACTTTGGGAGCCATGAAAGCACTACCACAGTCAGCTTaGCCTTCCTCCCAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WKGIAKGVLTQTLGAMKALPQSA*PSSQVL Trigger: CAACACTTGGGAGGAAGGTCAAGCTGACTGTGGTAG...TGCTTTCATGGCTCCCAAAGTTTGAGTCAGGACCCCTTTGGCTATTCCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | TTTACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGAAGCCCCCAGTGTCCTaGGTGGCTTTAAACCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTQSRICKRPSAFRVHVLKPPVS*VALNRG Trigger: ACCTCGGTTTAAAGCCACCCAGGACACTGGGGGCTT...CAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGACAGCAGAGACAGGTTAGGTGCAGAGATCTGGTGCGGATGGTAAAACTTCCTCCCAAGTGTTaGAAACTTGAGAAACGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGRQQRQVRCRDLVRMVKLPPKC*KLEKRE Trigger: TTCACGTTTCTCAAGTTTCCAACACTTGGGAGGAAG...TTTTACCATCCGCACCAGATCTCTGCACCTAACCTGTCTCTGCTGTCTGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | GGAAACAGCAATCCAATCCAGGTGCTGACACTTGACCTGGCCTCTGAGACTGAGCTTTATCTCCTAAGATaGAGGCACAGCTGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNSNPIQVLTLDLASETELYLLR*RHSCHF Trigger: AAAATGGCAGCTGTGCCTCCATCTTAGGAGATAAAG...CTCAGTCTCAGAGGCCAGGTCAAGTGTCAGCACCTGGATTGGATTGCTGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| 3UTR CAA 72 bp | TGGAAAGGAATAGCCAAAGGGGTCCTGACTCAAACTTaGGGAGCCATGAAAGCAGCCTGTGACCTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKGIAKGVLTQT*GAMKAACDLSF Trigger: GAAAGATAGGTCACAGGCTGCTTTCATGGCTCCCAAAGTTTGAGTCAGGACCCCTTTGGCTATTCCTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| 3UTR CAA 72 bp | CCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATaGAGTGTCTGCCAAAAAGGCACAGCTCTACAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PESPTCSGRPGI*SVCQKGTALQD Trigger: GTCTTGTAGAGCTGTGCCTTTTTGGCAGACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | ACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCAAAGAAAGTCCTCTGTaGATGCTCTGCTCTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQSRICKRPSAFRVHVLCKESPL*MLCSVP Trigger: GGGAACAGAGCAGAGCATTCACAGAGGACTTTCTTT...GCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAAACCAAAGAAGAATGCAAGGGTATCCAGAATCTCCTACATGTTCTGGCTACCACAGTCAGCTTaGCCTTCCTCCCAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQKPKKNARVSRISYMFWLPQSA*PSSQVL Trigger: CAACACTTGGGAGGAAGGTCAAGCTGACTGTGGTAG...CCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTTCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR GCA 90 bp | ACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCAAAGTCCTCTGTGAATaGTCTGCTCTGTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TQSRICKRPSAFRVHVLCKVLCE*SALFPH Trigger: GTGTGGGAACAGAGCAGAGCATTCACAGAGGACTTT...GCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATCACAAAACCATTTCACTTGTAGGTCGATGAGTCAACGAATGGAAAGGAAGCCCCCAGTGTCCTaGGTGGCTTTAAACCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSQNHFTCRSMSQRMERKPPVS*VALNRG Trigger: ACCTCGGTTTAAAGCCACCCAGGACACTGGGGGCTT...CCTTTCCATTCGTTGACTCATCGACCTACAAGTGAAATGGTTTTGTGATGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTCTTTGCATAGAACTCTTCTCTTAGAATGGCACAACTGTGTCTGTGTACTACCACAGTCAGCTTaGCCTTCCTCCCAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RASLHRTLLLEWHNCVCVLPQSA*PSSQVL Trigger: CAACACTTGGGAGGAAGGTCAAGCTGACTGTGGTAG...TACACAGACACAGTTGTGCCATTCTAAGAGAAGAGTTCTATGCAAAGAAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | CACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCCTCATGTCTGGCAATGTaGACCTTAGTCCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HNQESVRGPVLSESMCCASCLAM*TLVQSK Trigger: TTTGGATTGGACTAAGGTTCACATTGCCAGACATGA...GGCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR GCA 90 bp | TTTACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGAAAGTCCTCTGTGAATaGTCTGCTCTGTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FTQSRICKRPSAFRVHVLKVLCE*SALFPH Trigger: GTGTGGGAACAGAGCAGAGCATTCACAGAGGACTTT...CAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTGAGTGTCTGCTTTATCTCCTAAGATaGAGGCACAGCTGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVSRISYMFWETWDIECLLYLLR*RHSCHF Trigger: AAAATGGCAGCTGTGCCTCCATCTTAGGAGATAAAG...CAGACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| 3UTR CAA 72 bp | ACCAGCTTCATAAGCACAAGACAGGTAAGAGAATTCTaGGGGTCCACAGGCTTTTGCAGATTATGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSFISTRQVREF*GSTGFCRLWTP Trigger: TGGAGTCCATAATCTGCAAAAGCCTGTGGACCCCAAGAATTCTCTTACCTGTCTTGTGCTTATGAAGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGAACAAAAATGGGAAGACTCCAAGCCTTTAAAGCTTCTCTATCCTATCAAGCCCCCAGTGTCCTaGGTGGCTTTAAACCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKEQKWEDSKPLKLLYPIKPPVS*VALNRG Trigger: ACCTCGGTTTAAAGCCACCCAGGACACTGGGGGCTT...GATAGGATAGAGAAGCTTTAAAGGCTTGGAGTCTTCCCATTTTTGTTCTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTGAGTTTACTCGGGGTTTCATaGTTTAGTTCCTTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MQGYPESPTCSGRPGILSLLGVS*FSSFWQ Trigger: CTGCCAAAAGGAACTAAACCATGAAACCCCGAGTAA...ACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAACCAAAGAAGAATGCAAGGGTATCCAGAATCTCCTACATGTTCTGGGTCATGTCTGGCAATGTaGACCTTAGTCCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRNQRRMQGYPESPTCSGSCLAM*TLVQSK Trigger: TTTGGATTGGACTAAGGTTCACATTGCCAGACATGA...CCCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAAACCAAAGAAGAATGCAAGGGTATCCAGAATCTCCTACATGTTCTGGTTACTCGGGGTTTCATaGTTTAGTTCCTTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQKPKKNARVSRISYMFWLLGVS*FSSFWQ Trigger: CTGCCAAAAGGAACTAAACCATGAAACCCCGAGTAA...CCAGAACATGTAGGAGATTCTGGATACCCTTGCATTCTTCTTTGGTTTCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTTTGCATAGAACTCTTCTCTTAGAATGGCACAACTGTGTCTGTGTACACCCAAGGCCTTTGAGGTaGAATAAGCAAAAGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLHRTLLLEWHNCVCVHPRPLR*NKQKKV Trigger: GACTTTCTTTTGCTTATTTCACCTCAAAGGCCTTGG...GTGTACACAGACACAGTTGTGCCATTCTAAGAGAAGAGTTCTATGCAAAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTTGCATAGAACTCTTCTCTTAGAATGGCACAACTGTGTCTGTGTACACCTTTATCTCCTAAGATaGAGGCACAGCTGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLHRTLLLEWHNCVCVHLYLLR*RHSCHF Trigger: AAAATGGCAGCTGTGCCTCCATCTTAGGAGATAAAG...GTGTACACAGACACAGTTGTGCCATTCTAAGAGAAGAGTTCTATGCAAAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR TCA 90 bp | CATTTACACACTTTACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCATGTCTGGCAATGTaGACCTTAGTCCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLHTLHNQESVRGPVLSESCLAM*TLVQSK Trigger: TTTGGATTGGACTAAGGTTCACATTGCCAGACATGA...CTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGTAAAGTGTGTAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CCA 90 bp | CTGACATTTACACACTTTACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCTTACTCGGGGTTTCATaGTTTAGTTCCTTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTFTHFTQSRICKRPSAFLLGVS*FSSFWQ Trigger: CTGCCAAAAGGAACTAAACCATGAAACCCCGAGTAA...GAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGTAAAGTGTGTAAATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| 3UTR CAA 72 bp | TACCTTTGGCTTCCAAAAGCCAGAAATACTTTGCATTaGAGTGGCATGATTCTGAAAGTGGCATTAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YLWLPKARNTLH*SGMILKVALMD Trigger: GTCCATTAATGCCACTTTCAGAATCATGCCACTCAAATGCAAAGTATTTCTGGCTTTTGGAAGCCAAAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| 3UTR CAA 72 bp | AGCTCTCTACCTTCAGATCGGAAATGGTATTCTGTTTaGGATCTAAAGAATGCTTTCTTCAGCTTACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSDRKWYSV*DLKNAFFSLPL Trigger: CAAAGGTAAGCTGAAGAAAGCATTCTTTAGATCCAAAACAGAATACCATTTCCGATCTGAAGGTAGAGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGAGTACACAGTTAATAATCCAGATATAACTCTTGTTCAGTATGTAGATCTTCCTCCCAAGTGTTaGAAACTTGAGAAACGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGEYTVNNPDITLVQYVDLPPKC*KLEKRE Trigger: TTCACGTTTCTCAAGTTTCCAACACTTGGGAGGAAG...ATCTACATACTGAACAAGAGTTATATCTGGATTATTAACTGTGTACTCACCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| 3UTR CAA 72 bp | GATTACAAGAATTCACCTACTATTTTTGATGAAGCTTaGCATGAAGACCTGGGTGAGTACACAGTTAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: DYKNSPTIFDEA*HEDLGEYTVNN Trigger: ATTATTAACTGTGTACTCACCCAGGTCTTCATGCAAAGCTTCATCAAAAATAGTAGGTGAATTCTTGTAATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| CDS-3UTR CAA 90 bp | CACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCCTGGCAGATCCAACGGTaGTCTGAAGCACAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HNQESVRGPVLSESMCCAWQIQR*SEAQLS Trigger: TGAGAGCTGTGCTTCAGACAACCGTTGGATCTGCCA...GGCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAATTAGATCCAGTCTTCCATGGCTGTTGGCAGAGGAGCTCAGGCACAGAGTGGCAGATCCAACGGTaGTCTGAAGCACAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KKLDPVFHGCWQRSSGTEWQIQR*SEAQLS Trigger: TGAGAGCTGTGCTTCAGACAACCGTTGGATCTGCCA...CTCTGTGCCTGAGCTCCTCTGCCAACAGCCATGGAAGACTGGATCTAATTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGAGTCCATGTGCTGTGCCACTAACTGCACTGGGAGGCAGACAGCAGAGGAATCTCAGTTCTTCTaGGTCTTGAATGAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSESMCCATNCTGRQTAEESQFF*VLNEQQ Trigger: TTGCTGCTCATTCAAGACCAAGAAGAACTGAGATTC...CTCTGCTGTCTGCCTCCCAGTGCAGTTAGTGGCACAGCACATGGACTCTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | CACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTGCCCAGTTCTTCTTGGTCTaGAATGAGCAGCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNQESVRGPVLSESMCCAQFFLV*NEQQSG Trigger: GCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTG...GGCACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGTATCCAGAATCTCCTACATGTTCTGGGAGACCTGGGATATTGAGTGTCCAGTTCTTCTTGGTCTaGAATGAGCAGCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGYPESPTCSGRPGILSVQFFLV*NEQQSG Trigger: GCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTG...GACACTCAATATCCCAGGTCTCCCAGAACATGTAGGAGATTCTGGATACCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | TTACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGTCCATGTGCTGTTGGCAGATCCAACGGTaGTCTGAAGCACAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHNQESVRGPVLSESMCCWQIQR*SEAQLS Trigger: TGAGAGCTGTGCTTCAGACAACCGTTGGATCTGCCA...ACAGCACATGGACTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGCTCAGATTCATTTTGACCCTGGGAAAGTCCAGCTGACAGACGGAAACGAATCTCAGTTCTTCTaGGTCTTGAATGAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MGAQIHFDPGKVQLTDGNESQFF*VLNEQQ Trigger: TTGCTGCTCATTCAAGACCAAGAAGAACTGAGATTC...GTTTCCGTCTGTCAGCTGGACTTTCCCAGGGTCAAAATGAATCTGAGCTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167691.9 |
||
| CDS TCA 90 bp | CACTTAACTGGTGGTGAGAAGGGACAAACTCCAAGGCCTTTGAGGTaGAATAAGCAAAAGAAAGTCCTCTGTGAATGCTCTGCTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLTGGEKGQTPRPLR*NKQKKVLCECSALF Trigger: GAACAGAGCAGAGCATTCACAGAGGACTTTCTTTTGCTTATTTCACCTCAAAGGCCTTGGAGTTTGTCCCTTCTCACCACCAGTTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS-3UTR CAA 90 bp | CATTTACACACTTTACACAATCAAGAATCTGTAAGAGGCCCAGTGCTTTCAGAGCAGTTCTTCTTGGTCTaGAATGAGCAGCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLHTLHNQESVRGPVLSEQFFLV*NEQQSG Trigger: GCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTG...CTCTGAAAGCACTGGGCCTCTTACAGATTCTTGATTGTGTAAAGTGTGTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS CCA 72 bp | GAGATGGGGGTGACTCATGCCAAGCCCCCAGTGTCCTaGGTGGCTTTAAACCGAGGTAGATACTTGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EMGVTHAKPPVS*VALNRGRYLLC Trigger: ACACAGCAAGTATCTACCTCGGTTTAAAGCCACCCAGGACACTGGGGGCTTGGCATGAGTCACCCCCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 ENSMUST00000174865.2 |
||
| CDS CAA 72 bp | GAGCAGCAAAGTGGCTCCTTTTCTACCACAGTCAGCTaGACCTTCCTCCCAAGTGTTGGAAACTTGAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: EQQSGSFSTTVS*TFLPSVGNLRN Trigger: GTTTCTCAAGTTTCCAACACTTGGGAGGAAGGTCAAGCTGACTGTGGTAGAAAAGGAGCCACTTTGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS CAA 90 bp | GTCTTGAATGAGCAGCAAAGTGGCTCCTTTTCTACCACAGTCAGCTaGACCTTCCTCCCAAGTGTTGGAAACTTGAGAAACGTGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLNEQQSGSFSTTVS*TFLPSVGNLRNVKA Trigger: TGCTTTCACGTTTCTCAAGTTTCCAACACTTGGGAGGAAGGTCAAGCTGACTGTGGTAGAAAAGGAGCCACTTTGCTGCTCATTCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS TCA 72 bp | GGTGGTGAGAAGGGACAAACTCCAAGGCCTTTGAGGTaGAATAAGCAAAAGAAAGTCCTCTGTGAATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGEKGQTPRPLR*NKQKKVLCECS Trigger: AGAGCATTCACAGAGGACTTTCTTTTGCTTATTTCACCTCAAAGGCCTTGGAGTTTGTCCCTTCTCACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167691.9 ENSMUST00000174404.8 |
||
| CDS TCA 72 bp | AGTCCAGTAGGAATCTCAGTTCTTCTTGGTCTTGAATaGGCAGCAAAGTGGCTCCTTTTCTACCACAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPVGISVLLGLE*AAKWLLFYHSQ Trigger: CTGACTGTGGTAGAAAAGGAGCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTGAGATTCCTACTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||
| CDS TCA 72 bp | ATTGAGTCCAGTAGGAATCTCAGTTCTTCTTGGTCTTaGATGAGCAGCAAAGTGGCTCCTTTTCTACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: IESSRNLSSSWS*MSSKVAPFLPQ Trigger: CTGTGGTAGAAAAGGAGCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTGAGATTCCTACTGGACTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167691.9 ENSMUST00000172601.8 ENSMUST00000174404.8 |
||