Pregenerated sensors for KLRB1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030361Ensembl transcript IDs: ENSMUST00000032512.15, ENSMUST00000171306.5, ENSMUST00000203150.2, ENSMUST00000203275.3, ENSMUST00000204819.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCATCTGTAAGAGTCCCAGTGTTTTCAGAGTCCATGTGCTGTGCCACTAACTGTGTAGACATGGCTCAGTaGTTGAGAGCACTGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ASVRVPVFSESMCCATNCVDMAQ*LRALAA Trigger: AGCAGCCAGTGCTCTCAATCACTGAGCCATGTCTAC...ACAGTTAGTGGCACAGCACATGGACTCTGAAAACACTGGGACTCTTACAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| 3UTR-3UTR GCA 90 bp | ACATGGGCATCTGTAAGAGTCCCAGTGTTTTCAGAGTCCATGTGCTGTGCCACTCAGAGACAGGTTAGGTaGAGAGATCTGGTGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TWASVRVPVFSESMCCATQRQVR*RDLVWM Trigger: CATCCACACCAGATCTCTGCACCTAACCTGTCTCTG...AGTGGCACAGCACATGGACTCTGAAAACACTGGGACTCTTACAGATGCCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| 3UTR-3UTR TCA 90 bp | TATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTCCCAGTGTAGACATGGCTCAGTaGTTGAGAGCACTGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YLLYRIEKLHMGICKSPSVDMAQ*LRALAA Trigger: AGCAGCCAGTGCTCTCAATCACTGAGCCATGTCTAC...ACTGGGACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGAACCCCTCACGTAGAATGGCACATCAACATCTCTATCTCCTTTACAGAAATTGAGAGCACTGGCTaGTCTTGGACAGGATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: CRTPHVEWHINISISFTEIESTG*SWTGSE Trigger: CTCAGATCCTGTCCAAGAGCAGCCAGTGCTCTCAAT...TTCTGTAAAGGAGATAGAGATGTTGATGTGCCATTCTACGTGAGGGGTTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| 3UTR-3UTR GCA 90 bp | CATCTCTATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTATTGAGAGCACTGGCTaGTCTTGGACAGGATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: HLYLLYRIEKLHMGICKSIESTG*SWTGSE Trigger: CTCAGATCCTGTCCAAGAGCAGCCAGTGCTCTCAAT...ACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATAGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CCA 90 bp | TGTAGACATGGCTCAGTGATTGAGAGCACTGGCTGCTCTTGGACAGGATCTGAGTTGCTCAGGGTTTCATaGTATAGTTCCTTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRHGSVIESTGCSWTGSELLRVS*YSSFWQ Trigger: CTGCCAAAAGGAACTATACCATGAAACCCTGAGCAA...CTCAGATCCTGTCCAAGAGCAGCCAGTGCTCTCAATCACTGAGCCATGTCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CCA 90 bp | GTGCCACTAACTGTACTGAGAGGCAGACAGCAGAGACAGGTTAGGTGCAGAGATTTGCTCAGGGTTTCATaGTATAGTTCCTTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLTVLRGRQQRQVRCRDLLRVS*YSSFWQ Trigger: CTGCCAAAAGGAACTATACCATGAAACCCTGAGCAA...ATCTCTGCACCTAACCTGTCTCTGCTGTCTGCCTCTCAGTACAGTTAGTGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR TCA 90 bp | GCATCTGTAAGAGTCCCAGTGTTTTCAGAGTCCATGTGCTGTGCCACTAACTGTAGTTCTTCTTGGTCTTaGATGAGCATCAAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVRVPVFSESMCCATNCSSSWS*MSIKVA Trigger: AGCCACTTTGATGCTCATTCAAGACCAAGAAGAACT...ACAGTTAGTGGCACAGCACATGGACTCTGAAAACACTGGGACTCTTACAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR TCA 90 bp | TGTAGAACCCCTCACGTAGAATGGCACATCAACATCTCTATCTCCTTTACAGAACTTCTTGGTCTTGAATaGGCATCAAAGTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRTPHVEWHINISISFTELLGLE*ASKWLL Trigger: AAGGAGCCACTTTGATGCTCATTCAAGACCAAGAAG...TTCTGTAAAGGAGATAGAGATGTTGATGTGCCATTCTACGTGAGGGGTTCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CCA 90 bp | CATCTCTATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTAAGCCCCTGGAGTCCTaGGTGGCTTTAAACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLYLLYRIEKLHMGICKSKPLES*VALNQS Trigger: ACTTTGGTTTAAAGCCACCCAGGACTCCAGGGGCTT...ACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR TCA 90 bp | TGTAGAACCCCTCACGTAGAATGGCACATCAACATCTCTATCTCCTTTACAGAAAGTTCTTCTTGGTCTTaGATGAGCATCAAAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRTPHVEWHINISISFTESSSWS*MSIKVA Trigger: AGCCACTTTGATGCTCATTCAAGACCAAGAAGAACT...TTCTGTAAAGGAGATAGAGATGTTGATGTGCCATTCTACGTGAGGGGTTCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR TCA 90 bp | CATCTCTATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTCTTCTTGGTCTTGAATaGGCATCAAAGTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLYLLYRIEKLHMGICKSLLGLE*ASKWLL Trigger: AAGGAGCCACTTTGATGCTCATTCAAGACCAAGAAG...ACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATAGAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CAA 90 bp | GAGTCCATGTGCTGTGCCACTAACTGTACTGAGAGGCAGACAGCAGAGACAGGTCCAAGTGTTGGAAACTaGAGAAACGTGAAAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ESMCCATNCTERQTAETGPSVGN*RNVKAL Trigger: AAGTGCTTTCACGTTTCTCAAGTTTCCAACACTTGG...ACCTGTCTCTGCTGTCTGCCTCTCAGTACAGTTAGTGGCACAGCACATGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CAA 90 bp | GTGCCACTAACTGTACTGAGAGGCAGACAGCAGAGACAGGTTAGGTGCAGAGATGAATCTCAGTTCTTCTaGGTCTTGAATGAGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPLTVLRGRQQRQVRCRDESQFF*VLNEHQ Trigger: TTGATGCTCATTCAAGACCAAGAAGAACTGAGATTC...ATCTCTGCACCTAACCTGTCTCTGCTGTCTGCCTCTCAGTACAGTTAGTGGCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS TCA 90 bp | CCAAGTGTTGGAAACTTGAGAAACGTGAAAGCACTTATCTCGGTGTaGAAGCCAGTCTTGTGGGCACTCTGTTGTTTTATTCAGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSVGNLRNVKALISV*KPVLWALCCFIQVL Trigger: GAGAACCTGAATAAAACAACAGAGTGCCCACAAGACTGGCTTTCACACCGAGATAAGTGCTTTCACGTTTCTCAAGTTTCCAACACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203275.3 |
||
| CDS-3UTR CAA 90 bp | TGTAGAACCCCTCACGTAGAATGGCACATCAACATCTCTATCTCCTTTACAGAACAGTTCTTCTTGGTCTaGAATGAGCATCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRTPHVEWHINISISFTEQFFLV*NEHQSG Trigger: GCCACTTTGATGCTCATTCAAGACCAAGAAGAACTG...TTCTGTAAAGGAGATAGAGATGTTGATGTGCCATTCTACGTGAGGGGTTCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CAA 90 bp | TGTAGAACCCCTCACGTAGAATGGCACATCAACATCTCTATCTCCTTTACAGAACTCTCAAAAGTCACTTaGTCTCCTGAGATAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRTPHVEWHINISISFTELSKVT*SPEIAA Trigger: TGCTGCTATCTCAGGAGACAAAGTGACTTTTGAGAG...TTCTGTAAAGGAGATAGAGATGTTGATGTGCCATTCTACGTGAGGGGTTCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CAA 90 bp | TATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTCCCAGTCAGTTCTTCTTGGTCTaGAATGAGCATCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YLLYRIEKLHMGICKSPSQFFLV*NEHQSG Trigger: GCCACTTTGATGCTCATTCAAGACCAAGAAGAACTG...ACTGGGACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CAA 90 bp | TATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTCCCAGTCCAAGTGTTGGAAACTaGAGAAACGTGAAAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: YLLYRIEKLHMGICKSPSPSVGN*RNVKAL Trigger: AAGTGCTTTCACGTTTCTCAAGTTTCCAACACTTGG...ACTGGGACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS-3UTR CAA 90 bp | CATCTCTATCTCCTTTACAGAATAGAGAAACTACACATGGGCATCTGTAAGAGTCTCTCAAAAGTCACTTaGTCTCCTGAGATAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLYLLYRIEKLHMGICKSLSKVT*SPEIAA Trigger: TGCTGCTATCTCAGGAGACAAAGTGACTTTTGAGAG...ACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAGATAGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 |
||
| CDS TCA 90 bp | TTTTCCTTTATTGAGTCCAGTAGGAATCTCAGTTCTTCTTGGTCTTaGATGAGCATCAAAGTGGCTCCTTTTCCATCACAATCAACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSFIESSRNLSSSWS*MSIKVAPFPSQSTR Trigger: TCTAGTTGATTGTGATGGAAAAGGAGCCACTTTGATGCTCATTCAAGACCAAGAAGAACTGAGATTCCTACTGGACTCAATAAAGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS CCA 72 bp | GAGATGGGGGTGACTCATGCCAAGCCCCTGGAGTCCTaGGTGGCTTTAAACCAAAGTAGACCCTTGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EMGVTHAKPLES*VALNQSRPLLC Trigger: ACACAGCAAGGGTCTACTTTGGTTTAAAGCCACCCAGGACTCCAGGGGCTTGGCATGAGTCACCCCCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203150.2 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS CCA 72 bp | TTCCATCACAATCAACTAGACCTTCCTCCCAAGTGTTaGAAACTTGAGAAACGTGAAAGCACTTATCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: FHHNQLDLPPKC*KLEKRESTYLG Trigger: ACCGAGATAAGTGCTTTCACGTTTCTCAAGTTTCCAACACTTGGGAGGAAGGTCTAGTTGATTGTGATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS CAA 90 bp | TTGCTCAGGGTTTCATGGTATAGTTCCTTTTGGCAGATCCAACGGTaGTCTGAATTACAGCTCTCAAAAGTCACTTTGTCTCCTGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: LLRVSWYSSFWQIQR*SELQLSKVTLSPEI Trigger: TATCTCAGGAGACAAAGTGACTTTTGAGAGCTGTAATTCAGACAACCGTTGGATCTGCCAAAAGGAACTATACCATGAAACCCTGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS TCA 72 bp | AGTCCAGTAGGAATCTCAGTTCTTCTTGGTCTTGAATaGGCATCAAAGTGGCTCCTTTTCCATCACAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: SPVGISVLLGLE*ASKWLLFHHNQ Trigger: TTGATTGTGATGGAAAAGGAGCCACTTTGATGCTCATTCAAGACCAAGAAGAACTGAGATTCCTACTGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS TCA 72 bp | ATTGAGTCCAGTAGGAATCTCAGTTCTTCTTGGTCTTaGATGAGCATCAAAGTGGCTCCTTTTCCATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: IESSRNLSSSWS*MSIKVAPFPSQ Trigger: TTGTGATGGAAAAGGAGCCACTTTGATGCTCATTCAAGACCAAGAAGAACTGAGATTCCTACTGGACTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS CAA 72 bp | GTTTCATGGTATAGTTCCTTTTGGCAGATCCAACGGTaGTCTGAATTACAGCTCTCAAAAGTCACTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSWYSSFWQIQR*SELQLSKVTLS Trigger: AGACAAAGTGACTTTTGAGAGCTGTAATTCAGACAACCGTTGGATCTGCCAAAAGGAACTATACCATGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||
| CDS CAA 90 bp | CAGTTCATGTCTGGCAATGTGTACCTTAGTCCAATCCAAAATGAATaGTATTTTTCCTTTATTGAGTCCAGTAGGAATCTCAGTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QFMSGNVYLSPIQNE*YFSFIESSRNLSSS Trigger: AGAAGAACTGAGATTCCTACTGGACTCAATAAAGGAAAAATACAATTCATTTTGGATTGGACTAAGGTACACATTGCCAGACATGAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032512.15 ENSMUST00000171306.5 ENSMUST00000203275.3 ENSMUST00000204819.3 |
||