Pregenerated sensors for KLRB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079299Ensembl transcript IDs: ENSMUST00000112110.4
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGTGCCAGCCTGGTCCCTaGCAGGCATCTTGGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGCQPGP*QASWGR Trigger: TCTCCCCCAAGATGCCTGTCAGGGACCAGGCTGGCA...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CCA 90 bp | AGATCTGGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGCACCCGATGCCAGCCTaGTCCCTGACAGGCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: RSGVNSEVTEMRFIIRSQHPMPA*SLTGIL Trigger: CAAGATGCCTGTCAGGGACCAGGCTGGCATCGGGTG...CTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCCAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR TCA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGCTTCTTCATCTTGAATaGGCAGCAAAGTGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGLLHLE*AAKWLL Trigger: AAGGAGCCACTTTGCTGCTCATTCAAGATGAAGAAG...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR TCA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGCTTCTGTTTGTGAGATaGGGGCACAGCTGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGLLFVR*GHSCFL Trigger: AAGAAAACAGCTGTGCCCTCATCTCACAAACAGAAG...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACAAACACTTCTGTTTGTaGGATGAGGGCACAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SGVNSEVTEMRFIIRSQDKHFCL*DEGTAV Trigger: AACAGCTGTGCCCTCATCTCACAAACAGAAGTGTTT...GTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR TCA 90 bp | TCTGGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACATCCCACTAAGACACTaGGTACCATCAGAAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SGVNSEVTEMRFIIRSQDIPLRH*VPSEER Trigger: TCTTTCTTCTGATGGTACTCAGTGTCTTAGTGGGAT...GTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR TCA 90 bp | GGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACATCAGTCCTGTTTTCTTaGACAGCCACACTGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: GVNSEVTEMRFIIRSQDTSVLFS*TATLHF Trigger: AAAATGCAGTGTGGCTGTTCAAGAAAACAGGACTGA...TGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR TCA 90 bp | GGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAAATTCTTCTTCATCTTaGATGAGCAGCAAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVNSEVTEMRFIIRSQDTNSSSS*MSSKVA Trigger: AGCCACTTTGCTGCTCATTCAAGATGAAGAAGAATT...TGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CCA 90 bp | GGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACATGTTTCAGTGTCTTTTaGCAGATCCAATGGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVNSEVTEMRFIIRSQDTCFSVF*QIQWLS Trigger: AGACAACCATTGGATCTGCCAAAAGACACTGAAACA...TGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR GCA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGTCTATTAGAGGTTTTTaGACCAAGAATCCCACTAAG | + |
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Preference number: 4 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGSIRGF*TKNPTK Trigger: CTTAGTGGGATTCTTGGTGCAAAAACCTCTAATAGA...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CCA 90 bp | AGATCTGGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGTTTTGGCAGATCCAATaGTTGTCTGAAGAACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RSGVNSEVTEMRFIIRSQFWQIQ*LSEEQE Trigger: TTCCTGTTCTTCAGACAACCATTGGATCTGCCAAAA...CTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR GCA 90 bp | AGATCTGGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGCCCTTTGAGAAGTTCTaGAATAATCTCAATTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RSGVNSEVTEMRFIIRSQPFEKF*NNLNSS Trigger: AGAAGAATTGAGATTATTGCAGAACTTCTCAAAGGG...CTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCCAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS TCA 90 bp | TTCAAATTACAGTCAACCAGACCGTCAGCCCAAGGTCTGGAAGTTTaGGAAGTAAATAAGCATTTATCACAGTGTGGATGCCAGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: FKLQSTRPSAQGLEV*EVNKHLSQCGCQSL Trigger: GAGAGACTGGCATCCACACTGTGATAAATGCTTATTTACTTCTCAAACTTCCAGACCTTGGGCTGACGGTCTGGTTGACTGTAATTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CAA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGTGGCAGATCCAATGGTaGTCTGAAGAACAGGAATCA | + |
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Preference number: 5 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGWQIQW*SEEQES Trigger: TGATTCCTGTTCTTCAGACAACCATTGGATCTGCCA...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CAA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGTTCAGTCCTGTTTTCTaGAACAGCCACACTGCATTT | + |
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Preference number: 5 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGFSPVF*NSHTAF Trigger: AAATGCAGTGTGGCTGTTCAAGAAAACAGGACTGAA...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CAA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGCAATTCTTCTTCATCTaGAATGAGCAGCAAAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGQFFFI*NEQQSG Trigger: GCCACTTTGCTGCTCATTCAAGATGAAGAAGAATTG...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CAA 90 bp | AGATCTGGCGTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGTGTTTCAGTGTCTTTaGGCAGATCCAATGGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: RSGVNSEVTEMRFIIRSQVFQCL*ADPMVV Trigger: GACAACCATTGGATCTGCCAAAAGACACTGAAACAC...CTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCACGCCAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS-3UTR CAA 90 bp | GTGAATAGTGAAGTAACAGAGATGAGATTCATAATCAGGAGTCAGGACACAGGGGTTGTCCTTTTCCCTTaGAGAAGTTCTGCAATAATC | + |
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Preference number: 5 (lower is better) Translates to: VNSEVTEMRFIIRSQDTGVVLFP*RSSAII Trigger: GATTATTGCAGAACTTCTCAAAGGGAAAAGGACAAC...CCCTGTGTCCTGACTCCTGATTATGAATCTCATCTCTGTTACTTCACTATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS CCA 72 bp | CACAGTGTGGATGCCAGTCTCTCGGGCACTCTAGTGTaGCTGATCTCCCTGTTGGTTCAGTCCTGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HSVDASLSGTLV*LISLLVQSCFL Trigger: AAGAAAACAGGACTGAACCAACAGGGAGATCAGCCACACTAGAGTGCCCGAGAGACTGGCATCCACACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS CAA 90 bp | GTGGATGCCAGTCTCTCGGGCACTCTAGTGTGGCTGATCTCCCTGTaGGTTCAGTCCTGTTTTCTTGAACAGCCACACTGCATTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: VDASLSGTLVWLISL*VQSCFLEQPHCIFL Trigger: TAGAAAAATGCAGTGTGGCTGTTCAAGAAAACAGGACTGAACCAACAGGGAGATCAGCCACACTAGAGTGCCCGAGAGACTGGCATCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS TCA 72 bp | CAGTCAACCAGACCGTCAGCCCAAGGTCTGGAAGTTTaGGAAGTAAATAAGCATTTATCACAGTGTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: QSTRPSAQGLEV*EVNKHLSQCGC Trigger: GCATCCACACTGTGATAAATGCTTATTTACTTCTCAAACTTCCAGACCTTGGGCTGACGGTCTGGTTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS CAA 72 bp | CAGACGTGTTTCAGTGTCTTTTGGCAGATCCAATGGTaGTCTGAAGAACAGGAATCAGAAAACACTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QTCFSVFWQIQW*SEEQESENTSV Trigger: AACAGAAGTGTTTTCTGATTCCTGTTCTTCAGACAACCATTGGATCTGCCAAAAGACACTGAAACACGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS TCA 72 bp | GAGAAGTTCTGCAATAATCTCAATTCTTCTTCATCTTaGATGAGCAGCAAAGTGGCTCCTTTCAAATTACAG | + |
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Preference number: 6 (lower is better) Translates to: EKFCNNLNSSSS*MSSKVAPFKLQ Trigger: CTGTAATTTGAAAGGAGCCACTTTGCTGCTCATTCAAGATGAAGAAGAATTGAGATTATTGCAGAACTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS CAA 90 bp | AACACTTCTGTTTGTGAGATGAGGGCACAGCTGTTTTCTTCATCCTaGCCAGTGATTTGTAATAGATTAGTATTTAAAATAGAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: NTSVCEMRAQLFSSS*PVICNRLVFKIEPF Trigger: GAATGGTTCTATTTTAAATACTAATCTATTACAAATCACTGGCAAGGATGAAGAAAACAGCTGTGCCCTCATCTCACAAACAGAAGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS TCA 72 bp | AGTTCTGCAATAATCTCAATTCTTCTTCATCTTGAATaGGCAGCAAAGTGGCTCCTTTCAAATTACAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SSAIISILLHLE*AAKWLLSNYSQ Trigger: TTGACTGTAATTTGAAAGGAGCCACTTTGCTGCTCATTCAAGATGAAGAAGAATTGAGATTATTGCAGAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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| CDS CAA 72 bp | GTTTGTGAGATGAGGGCACAGCTGTTTTCTTCATCCTaGCCAGTGATTTGTAATAGATTAGTATTTAAAATA | + |
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Preference number: 6 (lower is better) Translates to: VCEMRAQLFSSS*PVICNRLVFKI Trigger: TATTTTAAATACTAATCTATTACAAATCACTGGCAAGGATGAAGAAAACAGCTGTGCCCTCATCTCACAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112110.4 |
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