Pregenerated sensors for KLRA9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033024Ensembl transcript IDs: ENSMUST00000071554.3, ENSMUST00000112032.8
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AATCAGAAAGAACACAATTCTGAAGGCTTTAGGGCAAAGCGAGCCCATTCACCCCTGAACACTTTCTGTTaGCAGCTTCTCTGGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: NQKEHNSEGFRAKRAHSPLNTFC*QLLWAL Trigger: AAGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAG...GGGTGAATGGGCTCGCTTTGCCCTAAAGCCTTCAGAATTGTGTTCTTTCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112032.8 |
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| CDS-3UTR CCA 90 bp | GATAGGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGATGTTGCCAGCTTCTCTaGGCCCTTGAGTCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: DRRVQSQCSCSFVSLHSRCCQLL*ALESPH Trigger: ATGAGGAGACTCAAGGGCCCAGAGAAGCTGGCAACA...TCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCAAGATAGATAGGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTTGTTGCCAGCTTCTCTaGGCCCTTGAGTCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SVKIDRRVQSQCSCSFVSCCQLL*ALESPH Trigger: ATGAGGAGACTCAAGGGCCCAGAGAAGCTGGCAACA...AGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCCTATCTATCTTGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTCAAGAGCTTTCACAATaGGTTGCCAGGATACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GEYSPNVLAALFLFTADFQELSQ*VARILN Trigger: GTTCAGTATCCTGGCAACTCATTGTGAAAGCTCTTG...AAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR GCA 90 bp | GTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTTCTTTAACCTGAACACTTTCTGTTaGCAGCTTCTCTGGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: VPMFLQLCFSSQQTLFFNLNTFC*QLLWAL Trigger: AAGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAG...GTTAAAGAACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071554.3 |
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| CDS-3UTR TCA 90 bp | GAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTTCAAGAGCTTTCACAATaGGTTGCCAGGATACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: EYSPNVLAALFLFTADFVQELSQ*VARILN Trigger: GTTCAGTATCCTGGCAACTCATTGTGAAAGCTCTTG...AACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR GCA 90 bp | AGGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTGCTTTCACAATGAGTTaGCAGGATACTGAACACTTT | + |
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Preference number: 4 (lower is better) Translates to: RRVQSQCSCSFVSLHSRLAFTMS*QDTEHF Trigger: AAAGTGTTCAGTATCCTGGCAACTCATTGTGAAAGC...AAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR TCA 90 bp | AGGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTCCTGTTCTCTTTTaGTGTAATCCAGAAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RRVQSQCSCSFVSLHSRLCPVLF*CNPEVH Trigger: ATGAACTTCTGGATTACATCAAAAGAGAACAGGACA...AAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR GCA 90 bp | GAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTTGCTTTCACAATGAGTTaGCAGGATACTGAACACTTT | + |
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Preference number: 4 (lower is better) Translates to: EYSPNVLAALFLFTADFVAFTMS*QDTEHF Trigger: AAAGTGTTCAGTATCCTGGCAACTCATTGTGAAAGC...AACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTAATCTAAAACCGTCTTaGTTTCACTGTTCCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: GEYSPNVLAALFLFTADFNLKPS*FHCSIC Trigger: ACAGATGGAACAGTGAAACCAAGACGGTTTTAGATT...AAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR CCA 90 bp | AGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTAATCCAGTAACTCTCTaGAATAACATGGCGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RVQSQCSCSFVSLHSRLCNPVTL*NNMALK Trigger: CTTCAACGCCATGTTATTCCAGAGAGTTACTGGATT...ACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR TCA 90 bp | TCTGTCAAGATAGATAGGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTTGTCCTGTTCTCTTTTaGTGTAATCCAGAAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SVKIDRRVQSQCSCSFVSCPVLF*CNPEVH Trigger: ATGAACTTCTGGATTACATCAAAAGAGAACAGGACA...AGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCCTATCTATCTTGACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR GCA 90 bp | TACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTTCTTAAGTTGAAATCACTTTaGATGTTGCTGCAGTTATGG | + |
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Preference number: 4 (lower is better) Translates to: YSPNVLAALFLFTADFVLKLKSL*MLLQLW Trigger: CCATAACTGCAGCAACATGCAAAGTGATTTCAACTT...AAGAACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071554.3 |
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| CDS-3UTR CCA 90 bp | GTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTTCTGTAATAATCTAAAACCGTCTTaGTTTCACTGTTCCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPMFLQLCFSSQQTLFCNNLKPS*FHCSIC Trigger: ACAGATGGAACAGTGAAACCAAGACGGTTTTAGATT...ATTACAGAACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112032.8 |
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| 3UTR CAA 72 bp | ATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTaGTTCTGTAATCAAAATACTTGTTTGTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: MFLQLCFSSQQT*FCNQNTCLLES Trigger: TGACTCCAACAAACAAGTATTTTGATTACAGAACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112032.8 |
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| CDS GCA 90 bp | ACCAGAAGAAGGAAACAGAGGATTCCAAGAGCTTTCACAATGAGTTaGCAGGATACTGAACACTTTCTGTTGCCAGCTTCTCTGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TRRRKQRIPRAFTMS*QDTEHFLLPASLGP Trigger: AGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAGTATCCTGGCAACTCATTGTGAAAGCTCTTGGAATCCTCTGTTTCCTTCTTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTACTGAACACTTTCTGTaGCCAGCTTCTCTGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GEYSPNVLAALFLFTADFTEHFL*PASLGP Trigger: AGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAGT...AAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS-3UTR CAA 90 bp | GTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTTTGTTCTGTAATACTGAACACTTTCTGTaGCCAGCTTCTCTGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: VPMFLQLCFSSQQTLFCNTEHFL*PASLGP Trigger: AGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAGT...ATTACAGAACAAAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112032.8 |
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| CDS-3UTR CAA 90 bp | TCTGTCAAGATAGATAGGAGAGTACAGTCCCAATGTTCTTGCAGCTTTGTTTCTGAATCTAAAACCGTCTaGGTTTCACTGTTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: SVKIDRRVQSQCSCSFVSESKTV*VSLFHL Trigger: CAGATGGAACAGTGAAACCAAGACGGTTTTAGATTC...AGAAACAAAGCTGCAAGAACATTGGGACTGTACTCTCCTATCTATCTTGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS GCA 90 bp | TTCTTGTTTGTGTTGACTATACTGAAAAATCTTTATCGTCAACACTaGAACTATTACCAGAAGAAGGAAACAGAGGATTCCAAGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: FLFVLTILKNLYRQH*NYYQKKETEDSKSF Trigger: AAAGCTCTTGGAATCCTCTGTTTCCTTCTTCTGGTAATAGTTGCAGTGTTGACGATAAAGATTTTTCAGTATAGTCAACACAAACAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS TCA 72 bp | GATTCCAAGAGCTTTCACAATGAGTTGCCAGGATACTaGACACTTTCTGTTGCCAGCTTCTCTGGGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: DSKSFHNELPGY*TLSVASFSGPL Trigger: CAAGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAGTATCCTGGCAACTCATTGTGAAAGCTCTTGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS CCA 72 bp | GCCAGGATACTGAACACTTTCTGTTGCCAGCTTCTCTaGGCCCTTGAGTCTCCTCATGCCTTACTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: ARILNTFCCQLL*ALESPHALLIS Trigger: AGAAATTAGTAAGGCATGAGGAGACTCAAGGGCCCAGAGAAGCTGGCAACAGAAAGTGTTCAGTATCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS CAA 72 bp | CCTCTGCCTGTGTCCCGTGAGGAATCTAAAACCGTCTaGGTTTCACTGTTCCATCTGTCCTGTTCTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLPVSREESKTV*VSLFHLSCSLL Trigger: CAAAAGAGAACAGGACAGATGGAACAGTGAAACCAAGACGGTTTTAGATTCCTCACGGGACACAGGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS GCA 72 bp | AGGAAACAGAGGATTCCAAGAGCTTTCACAATGAGTTaGCAGGATACTGAACACTTTCTGTTGCCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RKQRIPRAFTMS*QDTEHFLLPAS Trigger: AGAAGCTGGCAACAGAAAGTGTTCAGTATCCTGGCAACTCATTGTGAAAGCTCTTGGAATCCTCTGTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS CAA 72 bp | CAATCCAATCCAGTAACTCTCTGGAATAACATGGCGTaGAAGGAATTTCAGTTCATCTTCATCTTCTATCTT | + |
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Preference number: 6 (lower is better) Translates to: QSNPVTLWNNMA*KEFQFIFIFYL Trigger: AAGATAGAAGATGAAGATGAACTGAAATTCCTTCAACGCCATGTTATTCCAGAGAGTTACTGGATTGGATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS CCA 72 bp | TTTCTTATCATAAGACAATCCAATCCAGTAACTCTCTaGAATAACATGGCGTTGAAGGAATTTCAGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: FLIIRQSNPVTL*NNMALKEFQFI Trigger: GATGAACTGAAATTCCTTCAACGCCATGTTATTCCAGAGAGTTACTGGATTGGATTGTCTTATGATAAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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| CDS CCA 72 bp | CTGTTCTCTTTTGATGTAATCCAGAAGTTCATTGCTTaGCCTACAATCTATAGACTTATTTGTCAACATTTC | + |
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Preference number: 6 (lower is better) Translates to: LFSFDVIQKFIA*PTIYRLICQHF Trigger: GAAATGTTGACAAATAAGTCTATAGATTGTAGGCCAAGCAATGAACTTCTGGATTACATCAAAAGAGAACAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071554.3 ENSMUST00000112032.8 |
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