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Pregenerated sensors for KLRA8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000089727

Ensembl transcript IDs: ENSMUST00000014476.6

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GACCTCTGTTCTGTCAAGATAGATAGGAGAGGACAGTCCCAATGTTCTTGCAGCAAGTTGAAATCCCTTTaGATGTTGCTGCAGTTATGG +
Preference number: 4 (lower is better)
Translates to: DLCSVKIDRRGQSQCSCSKLKSL*MLLQLW
Trigger: CCATAACTGCAGCAACATGCAAAGGGATTTCAACTT...GCTGCAAGAACATTGGGACTGTCCTCTCCTATCTATCTTGACAGAACAGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS-3UTR GCA 90 bp GTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTATGTTCTTTAACCTTTGTCACAAACACTaGAACAATTACCAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VPMFLQLCFSSQQTMFFNLCHKH*NNYQPK
Trigger: CTTCGGCTGGTAATTGTTGCAGTGTTTGTGACAAAG...GTTAAAGAACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS-3UTR CCA 90 bp GACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTATGTTCTTAATCTGAAACACTCTTaGTTTCACTGTCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: DSPNVLAALFLFTADYVLNLKHS*FHCPIS
Trigger: AGAGATGGGACAGTGAAACCAAGAGTGTTTCAGATT...AAGAACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS-3UTR CCA 90 bp ATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTATGTTCTTTAACTCTGGTCTTCTATCTTCACAATaGGAACGCTGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: MFLQLCFSSQQTMFFNSGLLSSQ*ERCNAG
Trigger: GCCAGCATTACAGCGTTCCCATTGTGAAGATAGAAG...ACCAGAGTTAAAGAACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS-3UTR CCA 90 bp AAAAATGACCTCTGTTCTGTCAAGATAGATAGGAGAGGACAGTCCCAATGTTCTAACCCTGAAGACTTGTaGAATCTCATAGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: KNDLCSVKIDRRGQSQCSNPEDL*NLIVGK
Trigger: TTTCCCAACTATGAGATTCCACAAGTCTTCAGGGTT...AGAACATTGGGACTGTCCTCTCCTATCTATCTTGACAGAACAGAGGTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS TCA 90 bp TGCCAAGGGACTGAACACACTCTTAGGCCAGCTTTTCTAGATCTCTaGGTCCCCTCAAGTCTCACCTGGCTGTTCAACCCTGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: CQGTEHTLRPAFLDL*VPSSLTWLFNPEDL
Trigger: CAAGTCTTCAGGGTTGAACAGCCAGGTGAGACTTGAGGGGACTCAGAGATCTAGAAAAGCTGGCCTAAGAGTGTGTTCAGTCCCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS-3UTR CAA 90 bp GAGGACAGTCCCAATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTATGTTAAATCCCTTTGCATGTaGCTGCAGTTATGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: EDSPNVLAALFLFTADYVKSLCM*LQLWRW
Trigger: CCACCGCCATAACTGCAGCAACATGCAAAGGGATTT...AACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS-3UTR CAA 90 bp ATGTTCTTGCAGCTTTGTTTCTCTTCACAGCAGACTATGTTCTTTAACTCTGGTCAGTTATGGCGGTGGTaGAGAGTTTCATTGATTTCT +
Preference number: 5 (lower is better)
Translates to: MFLQLCFSSQQTMFFNSGQLWRW*RVSLIS
Trigger: AGAAATCAATGAAACTCTCAACCACCGCCATAACTG...ACCAGAGTTAAAGAACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS TCA 72 bp CTGAGTCCCCTCAAGTCTCACCTGGCTGTTCAACCCTaGAGACTTGTGGAATCTCATAGTTGGGAAAGTGAC +
Preference number: 6 (lower is better)
Translates to: LSPLKSHLAVQP*RLVESHSWESD
Trigger: GTCACTTTCCCAACTATGAGATTCCACAAGTCTTCAGGGTTGAACAGCCAGGTGAGACTTGAGGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS TCA 72 bp ACTGAACACACTCTTAGGCCAGCTTTTCTAGATCTCTaGGTCCCCTCAAGTCTCACCTGGCTGTTCAACCCT +
Preference number: 6 (lower is better)
Translates to: TEHTLRPAFLDL*VPSSLTWLFNP
Trigger: AGGGTTGAACAGCCAGGTGAGACTTGAGGGGACTCAGAGATCTAGAAAAGCTGGCCTAAGAGTGTGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS GCA 72 bp AGGGAACAGAGGATTCCAAGAGCTATCACAATGAGCTaGCAAGGGACTGAACACACTCTTAGGCCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: REQRIPRAITMS*QGTEHTLRPAF
Trigger: AAAAGCTGGCCTAAGAGTGTGTTCAGTCCCTTGGCAGCTCATTGTGATAGCTCTTGGAATCCTCTGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CAA 72 bp CCTCTGCCTGTGTCTCGTGAAGAATCTGAAACACTCTaGGTTTCACTGTCCCATCTCTCCTGTTCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: PLPVSREESETL*VSLSHLSCSLL
Trigger: CAAAAGAGAACAGGAGAGATGGGACAGTGAAACCAAGAGTGTTTCAGATTCTTCACGAGACACAGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CAA 90 bp TATTTAACACCTCTGCCTGTGTCTCGTGAAGAATCTGAAACACTCTaGGTTTCACTGTCCCATCTCTCCTGTTCTCTTTTGATGTATTCC +
Preference number: 6 (lower is better)
Translates to: YLTPLPVSREESETL*VSLSHLSCSLLMYS
Trigger: GGAATACATCAAAAGAGAACAGGAGAGATGGGACAGTGAAACCAAGAGTGTTTCAGATTCTTCACGAGACACAGGCAGAGGTGTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CCA 72 bp GGAATTTCAGTTCATCTTCATCTTCTATCTTCACAATaGGAACGCTGTAATGCTGGCAGTTCGCTTTACATC +
Preference number: 6 (lower is better)
Translates to: GISVHLHLLSSQ*ERCNAGSSLYI
Trigger: GATGTAAAGCGAACTGCCAGCATTACAGCGTTCCCATTGTGAAGATAGAAGATGAAGATGAACTGAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS GCA 72 bp TTTGTCAACATTTCTTCCTTTAAGTTGAAATCCCTTTaGATGTTGCTGCAGTTATGGCGGTGGTTGAGAGTT +
Preference number: 6 (lower is better)
Translates to: FVNISSFKLKSL*MLLQLWRWLRV
Trigger: AACTCTCAACCACCGCCATAACTGCAGCAACATGCAAAGGGATTTCAACTTAAAGGAAGAAATGTTGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CAA 72 bp AACATTTCTTCCTTTAAGTTGAAATCCCTTTGCATGTaGCTGCAGTTATGGCGGTGGTTGAGAGTTTCATTG +
Preference number: 6 (lower is better)
Translates to: NISSFKLKSLCM*LQLWRWLRVSL
Trigger: CAATGAAACTCTCAACCACCGCCATAACTGCAGCAACATGCAAAGGGATTTCAACTTAAAGGAAGAAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CCA 72 bp TTTAAGTTGAAATCCCTTTGCATGTTGCTGCAGTTATaGCGGTGGTTGAGAGTTTCATTGATTTCTTGTTTG +
Preference number: 6 (lower is better)
Translates to: FKLKSLCMLLQL*RWLRVSLISCL
Trigger: CAAACAAGAAATCAATGAAACTCTCAACCACCGCCATAACTGCAGCAACATGCAAAGGGATTTCAACTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CAA 90 bp TTATTTGTCAACATTTCTTCCTTTAAGTTGAAATCCCTTTGCATGTaGCTGCAGTTATGGCGGTGGTTGAGAGTTTCATTGATTTCTTGT +
Preference number: 6 (lower is better)
Translates to: LFVNISSFKLKSLCM*LQLWRWLRVSLISC
Trigger: ACAAGAAATCAATGAAACTCTCAACCACCGCCATAACTGCAGCAACATGCAAAGGGATTTCAACTTAAAGGAAGAAATGTTGACAAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6
CDS CCA 72 bp CTGTTCTCTTTTGATGTATTCCAGAAGTTCATAGCTTaGCCTACAATCTATAGACTTATTTGTCAACATTTC +
Preference number: 6 (lower is better)
Translates to: LFSFDVFQKFIA*PTIYRLICQHF
Trigger: GAAATGTTGACAAATAAGTCTATAGATTGTAGGCCAAGCTATGAACTTCTGGAATACATCAAAAGAGAACAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014476.6