Pregenerated sensors for KLRA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030173Ensembl transcript IDs: ENSMUST00000014683.13, ENSMUST00000118060.8, ENSMUST00000169901.7
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGTTCTGTCAAAATAGATACCAGAGAACAGTCCCAATGCTCCTaGAGCTTTGTTTCTCTTCACAGCAGACTATGTTCTTTAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: LCSVKIDTREQSQCS*SFVSLHSRLCSLTL Trigger: GAGAGTTAAAGAACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAGGAGCATTGGGACTGTTCTCTGGTATCTATTTTGACAGAACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTCAGTCCCAATGCTCCTaGAGCTTTGTTTCTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: QKEQNSEGFMQRVPIPQSQSQCS*SFVSLH Trigger: GTGAAGAGAAACAAAGCTGCAGGAGCATTGGGACTG...ACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| 3UTR GCA 72 bp | GTCAAAATAGATACCAGAGAACAGTCCCAATGCTCCTaGAGCTTTGTTTCTCTTCACAGCAGACTATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: VKIDTREQSQCS*SFVSLHSRLCS Trigger: AGAACATAGTCTGCTGTGAAGAGAAACAAAGCTGCAGGAGCATTGGGACTGTTCTCTGGTATCTATTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| 3UTR GCA 72 bp | TGTTCTGTCAAAATAGATACCAGAGAACAGTCCCAATaGTCCTGCAGCTTTGTTTCTCTTCACAGCAGACTA | + |
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Preference number: 3 (lower is better) Translates to: CSVKIDTREQSQ*SCSFVSLHSRL Trigger: TAGTCTGCTGTGAAGAGAAACAAAGCTGCAGGAGCATTGGGACTGTTCTCTGGTATCTATTTTGACAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| 3UTR GCA 72 bp | AGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTaGCCATTCCCCAGAGTAGATGTGTTCTGTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: RKNKILKALCKG*PFPRVDVFCLQ Trigger: TTGGAGACAGAACACATCTACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGGCTTCTCCGGGCCCTTaGATCTCCTCATGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLASPGP*ISSWLT Trigger: AGTGAGCCATGAGGAGATTCAAGGGCCCGGAGAAGC...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGGAGCTGCCAGGGTACTaGACACTTTCTGTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLELPGY*TLSVAS Trigger: GCTGGCTACAGAAAGTGTTCAGTACCCTGGCAGCTC...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | ATTCCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTGCTTCTCCGGGCCCTTaGATCTCCTCATGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: IPQSRCVLSPRGRKMNSVASPGP*ISSWLT Trigger: AGTGAGCCATGAGGAGATTCAAGGGCCCGGAGAAGC...AACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGGATCTCACAGTGAGCTaGCAGGGTACTGAACACTTT | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLDLTVS*QGTEHF Trigger: AAAGTGTTCAGTACCCTGGCAGCTCACTGTGAGATC...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGTGTTCTGTTCTCTGTTaGGGGATTCCAGAAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLCSVLC*GIPEVP Trigger: AGGAACTTCTGGAATCCCTCAACAGAGAACAGAACA...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | CAGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTATGAAGTCTCACAGTTaGGTAAGTGACCTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QKEQNSEGFMQRVPIPQSMKSHS*VSDLWF Trigger: GAACCAGAGGTCACTTACTCAACTGTGAGACTTCAT...ACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | ATTCCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTTGTTCTGTTCTCTGTTaGGGGATTCCAGAAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IPQSRCVLSPRGRKMNSVCSVLC*GIPEVP Trigger: AGGAACTTCTGGAATCCCTCAACAGAGAACAGAACA...AACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTAGATCTCACAGTGAGCTaGCAGGGTACTGAACACTTT | + |
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Preference number: 4 (lower is better) Translates to: RKNKILKALCKGCPFPRVDLTVS*QGTEHF Trigger: AAAGTGTTCAGTACCCTGGCAGCTCACTGTGAGATC...TACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGATGTTGCTGCAGTTATaGTTGTGGTTTAGAGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLMLLQL*LWFRVS Trigger: CGAAACTCTAAACCACAACCATAACTGCAGCAACAT...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | AGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTAATGAAGTCTCACAGTTaGGTAAGTGACCTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RKNKILKALCKGCPFPRVMKSHS*VSDLWF Trigger: GAACCAGAGGTCACTTACTCAACTGTGAGACTTCAT...TACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGGAAATAACCTGGAACTaGAGGAATTTCAGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLEITWN*RNFSSS Trigger: AGATGAACTGAAATTCCTTCAGTTCCAGGTTATTTC...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGAATTTGATGTCACTTTaGATGTTGCTGCAGTTATGG | + |
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Preference number: 4 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLNLMSL*MLLQLW Trigger: CCATAACTGCAGCAACATGCAAAGTGACATCAAATT...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CCA 90 bp | ATTCCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGCAGTTATGGTTGTaGTTTAGAGTTTCGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: IPQSRCVLSPRGRKMNSVLQLWL*FRVSWI Trigger: AATCCACGAAACTCTAAACCACAACCATAACTGCAG...AACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTCTGCAGTTATGGTTGTaGTTTAGAGTTTCGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: QKEQNSEGFMQRVPIPQSLQLWL*FRVSWI Trigger: AATCCACGAAACTCTAAACCACAACCATAACTGCAG...ACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CCA 90 bp | ATTCCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTATGTTGCTGCAGTTATaGTTGTGGTTTAGAGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: IPQSRCVLSPRGRKMNSVMLLQL*LWFRVS Trigger: CGAAACTCTAAACCACAACCATAACTGCAGCAACAT...AACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR GCA 90 bp | ATTCCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTAATTTGATGTCACTTTaGATGTTGCTGCAGTTATGG | + |
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Preference number: 4 (lower is better) Translates to: IPQSRCVLSPRGRKMNSVNLMSL*MLLQLW Trigger: CCATAACTGCAGCAACATGCAAAGTGACATCAAATT...AACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTAATCTAAATCTGTCTTaGTTTCACTGTACCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: QKEQNSEGFMQRVPIPQSNLNLS*FHCTIC Trigger: ACAGATGGTACAGTGAAACCAAGACAGATTTAGATT...ACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR TCA 90 bp | AAGGAAGATGAACTCTGTTCTGTCAAAATAGATACCAGAGAACAGTCCCAATGCGAAATAACCTGGAACTaGAGGAATTTCAGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KEDELCSVKIDTREQSQCEITWN*RNFSSS Trigger: AGATGAACTGAAATTCCTTCAGTTCCAGGTTATTTC...GCATTGGGACTGTTCTCTGGTATCTATTTTGACAGAACAGAGTTCATCTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR GCA 90 bp | AAGGAAGATGAACTCTGTTCTGTCAAAATAGATACCAGAGAACAGTCCCAATGCGTTTCTTCCCACAAATaGAGAAGTAGGAATTATTAC | + |
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Preference number: 4 (lower is better) Translates to: KEDELCSVKIDTREQSQCVSSHK*RSRNYY Trigger: GTAATAATTCCTACTTCTGCATTTGTGGGAAGAAAC...GCATTGGGACTGTTCTCTGGTATCTATTTTGACAGAACAGAGTTCATCTTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGAACAAAATTCTGAAGGCTTTATGCAAAGGGTGCCCATTCCCCAGAGTTTGCTGCAGTTATGGTaGTGGTTTAGAGTTTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: QKEQNSEGFMQRVPIPQSLLQLW*WFRVSW Trigger: CCACGAAACTCTAAACCACAACCATAACTGCAGCAA...ACTCTGGGGAATGGGCACCCTTTGCATAAAGCCTTCAGAATTTTGTTCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CAA 90 bp | ATTCCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTTTGCTGCAGTTATGGTaGTGGTTTAGAGTTTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: IPQSRCVLSPRGRKMNSVLLQLW*WFRVSW Trigger: CCACGAAACTCTAAACCACAACCATAACTGCAGCAA...AACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGAGTAGATGTGTTCTGTCTCCAAGAGGAAGGAAGATGAACTCTGTTCTGGAATCTAAATCTGTCTaGGTTTCACTGTACCATCTG | + |
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Preference number: 5 (lower is better) Translates to: PQSRCVLSPRGRKMNSVLESKSV*VSLYHL Trigger: CAGATGGTACAGTGAAACCAAGACAGATTTAGATTC...CAGAACAGAGTTCATCTTCCTTCCTCTTGGAGACAGAACACATCTACTCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGATGAACTCTGTTCTGTCAAAATAGATACCAGAGAACAGTCCCAATGCGAATCTAAATCTGTCTaGGTTTCACTGTACCATCTG | + |
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Preference number: 5 (lower is better) Translates to: KEDELCSVKIDTREQSQCESKSV*VSLYHL Trigger: CAGATGGTACAGTGAAACCAAGACAGATTTAGATTC...GCATTGGGACTGTTCTCTGGTATCTATTTTGACAGAACAGAGTTCATCTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGATGAACTCTGTTCTGTCAAAATAGATACCAGAGAACAGTCCCAATGCAGTTTCGTGGATTTCTaGTTTGTGTTGACTATACTG | + |
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Preference number: 5 (lower is better) Translates to: KEDELCSVKIDTREQSQCSFVDF*FVLTIL Trigger: CAGTATAGTCAACACAAACAAGAAATCCACGAAACT...GCATTGGGACTGTTCTCTGGTATCTATTTTGACAGAACAGAGTTCATCTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS CAA 72 bp | GTCTTGGTTTCACTGTACCATCTGTTCTGTTCTCTGTaGAGGGATTCCAGAAGTTCCTCACCTGGACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VLVSLYHLFCSL*RDSRSSSPGLQ Trigger: TTGCAGTCCAGGTGAGGAACTTCTGGAATCCCTCAACAGAGAACAGAACAGATGGTACAGTGAAACCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 ENSMUST00000169901.7 |
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| CDS TCA 72 bp | TCTTGGTTTCACTGTACCATCTGTTCTGTTCTCTGTTaGGGGATTCCAGAAGTTCCTCACCTGGACTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SWFHCTICSVLC*GIPEVPHLDCN Trigger: ATTGCAGTCCAGGTGAGGAACTTCTGGAATCCCTCAACAGAGAACAGAACAGATGGTACAGTGAAACCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 ENSMUST00000169901.7 |
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| CDS CCA 72 bp | CTGTTCTCTGTTGAGGGATTCCAGAAGTTCCTCACCTaGACTGCAATCTATAGACTTATTTCTCAACATTTC | + |
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Preference number: 6 (lower is better) Translates to: LFSVEGFQKFLT*TAIYRLISQHF Trigger: GAAATGTTGAGAAATAAGTCTATAGATTGCAGTCCAGGTGAGGAACTTCTGGAATCCCTCAACAGAGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 ENSMUST00000169901.7 |
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| CDS CAA 72 bp | AATTTGATGTCACTTTGCATGTTGCTGCAGTTATGGTaGTGGTTTAGAGTTTCGTGGATTTCTTGTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: NLMSLCMLLQLW*WFRVSWISCLC Trigger: ACACAAACAAGAAATCCACGAAACTCTAAACCACAACCATAACTGCAGCAACATGCAAAGTGACATCAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS CAA 72 bp | AACATTTCTTCCTTTAATTTGATGTCACTTTGCATGTaGCTGCAGTTATGGTTGTGGTTTAGAGTTTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: NISSFNLMSLCM*LQLWLWFRVSW Trigger: CCACGAAACTCTAAACCACAACCATAACTGCAGCAACATGCAAAGTGACATCAAATTAAAGGAAGAAATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS CAA 90 bp | GGACTGCAATCTATAGACTTATTTCTCAACATTTCTTCCTTTAATTaGATGTCACTTTGCATGTTGCTGCAGTTATGGTTGTGGTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GLQSIDLFLNISSFN*MSLCMLLQLWLWFR Trigger: TCTAAACCACAACCATAACTGCAGCAACATGCAAAGTGACATCAAATTAAAGGAAGAAATGTTGAGAAATAAGTCTATAGATTGCAGTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS CCA 72 bp | TTTAATTTGATGTCACTTTGCATGTTGCTGCAGTTATaGTTGTGGTTTAGAGTTTCGTGGATTTCTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FNLMSLCMLLQL*LWFRVSWISCL Trigger: CAAACAAGAAATCCACGAAACTCTAAACCACAACCATAACTGCAGCAACATGCAAAGTGACATCAAATTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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| CDS GCA 72 bp | TTTCTCAACATTTCTTCCTTTAATTTGATGTCACTTTaGATGTTGCTGCAGTTATGGTTGTGGTTTAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: FLNISSFNLMSL*MLLQLWLWFRV Trigger: AACTCTAAACCACAACCATAACTGCAGCAACATGCAAAGTGACATCAAATTAAAGGAAGAAATGTTGAGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014683.13 ENSMUST00000118060.8 |
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