Pregenerated sensors for KLRA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030187Ensembl transcript IDs: ENSMUST00000032306.15, ENSMUST00000088867.7
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATACCTCTGAGCCATTGCATCTAGCTGGCGTCAATAAATATTACTaGAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGAT | + |
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Preference number: 1 (lower is better) Translates to: YTSEPLHLAGVNKYY*NYGVSIYHQMHYID Trigger: ATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCAGTAATATTTATTGACGCCAGCTAGATGCAATGGCTCAGAGGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| 3UTR-3UTR GCA 90 bp | CCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGACAGAAAGACAAAAGGAAGATGGCTCCTaGTCTGTTAAGTCTGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: PFITKCIILIRETETERQKEDGS*SVKSVV Trigger: GACAACAGACTTAACAGAGCAGGAGCCATCTTCCTT...TTGTCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| 3UTR-3UTR CCA 90 bp | ACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGACAGCAACTGCATCCTaGTTCTTAAGTGATTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TMGFPFITKCIILIRETETATAS*FLSDFR Trigger: TCTGAAATCACTTAAGAACCAGGATGCAGTTGCTGT...CTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| 3UTR GCA 72 bp | ATTACTGCAACTATGGGGTTTCCATTTATCACCAAATaGATTATATTGATCAGGGAAACAGAGACAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: ITATMGFPFITK*IILIRETETER Trigger: TCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCAGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | ACTGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAGAACTTCCAGGGGACTaGACACTCTCTGTGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TATMGFPFITKCIILIREELPGD*TLSVAH Trigger: GTGGGCCACAGAGAGTGTTCAGTCCCCTGGAAGTTC...TTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR CCA 90 bp | TTCAGGAAACAGAGTGATTCTTCAAAGCTTAGGGCAAAGAGTGTCCATTCTTCAACTGAACACTCTCTGTaGCCCACATCTCTGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FRKQSDSSKLRAKSVHSSTEHSL*PTSLGL Trigger: AAGGCCCAGAGATGTGGGCCACAGAGAGTGTTCAGT...TGAAGAATGGACACTCTTTGCCCTAAGCTTTGAAGAATCACTCTGTTTCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | GTGATTCTTCAAAGCTTAGGGCAAAGAGTGTCCATTCTTCAGACACAAGCTTCTTCCTCTTTGCTTTCGTaGTGTGTCAGTGCAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: VILQSLGQRVSILQTQASSSLLS*CVSAIQ Trigger: CTGGATTGCACTGACACATCACGAAAGCAAAGAGGA...AGAAGCTTGTGTCTGAAGAATGGACACTCTTTGCCCTAAGCTTTGAAGAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR CCA 90 bp | TTCAGACACAAGCTTCTCTGTTTACCAGGAAGGAAGATGGCTCCTGCTCTGTTACTTGGCACAGCTCCCTaGAATAGGGAATTTATTCAA | + |
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Preference number: 4 (lower is better) Translates to: FRHKLLCLPGRKMAPALLLGTAP*NREFIQ Trigger: TTGAATAAATTCCCTATTCCAGGGAGCTGTGCCAAG...TAACAGAGCAGGAGCCATCTTCCTTCCTGGTAAACAGAGAAGCTTGTGTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | TGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACCTCTGCAGAGCAGATTaGGTTCTTCCCTTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: CNYGVSIYHQMHYIDQGNLCRAD*VLPLAQ Trigger: CTGTGCCAAGGGAAGAACTCAATCTGCTCTGCAGAG...GTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR GCA 90 bp | TTCAGGAAACAGAGTGATTCTTCAAAGCTTAGGGCAAAGAGTGTCCATTCTTCAGTGTATCACCAACACTaGCACAGTTACCAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FRKQSDSSKLRAKSVHSSVYHQH*HSYQQK Trigger: CTTCTGCTGGTAACTGTGGCAGTGTTGGTGATACAC...TGAAGAATGGACACTCTTTGCCCTAAGCTTTGAAGAATCACTCTGTTTCCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR CCA 90 bp | CCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGACAGAAAGACAATGTGGCCCACATCTCTaGGCCTTTGAGTCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PFITKCIILIRETETERQCGPHL*AFESPQ Trigger: CTGAGGAGACTCAAAGGCCCAGAGATGTGGGCCACA...TTGTCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | ACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGCAATCTTGGTTTTCCTaGGGCATCTGTTCTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TMGFPFITKCIILIRETEQSWFS*GICSVL Trigger: GAGAACAGAACAGATGCCTCAGGAAAACCAAGATTG...CTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR GCA 90 bp | ACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGGTTGCGATTCCTCTTTaGTTTCGTGATGTGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TMGFPFITKCIILIRETEVAIPL*FRDVSV Trigger: CACTGACACATCACGAAAGCAAAGAGGAATCGCAAC...CTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | CCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGACAGAAAGACAATGGGTTCTGCAACCCTaGAGACTTATGAAATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PFITKCIILIRETETERQWVLQP*RLMKSQ Trigger: CTGAGATTTCATAAGTCTTCAGGGTTGCAGAACCCA...TTGTCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | CCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGACAGAAAGACAAAGCTGTCATTTTTCATaGCCTGGTACTCTTGACGGA | + |
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Preference number: 4 (lower is better) Translates to: PFITKCIILIRETETERQSCHFS*PGTLDG Trigger: TCCGTCAAGAGTACCAGGTCATGAAAAATGACAGCT...TTGTCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR GCA 90 bp | ACTGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAATCCTTCCACTTGCTTaGCTTTGTTCTGTGAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TATMGFPFITKCIILIREILPLA*LCSVSN Trigger: ATTGCTCACAGAACAAAGGCAAGCAAGTGGAAGGAT...TTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR GCA 90 bp | ACTGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAATTCGTGATGTGTCAGTaGAATCCAGTATGTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TATMGFPFITKCIILIREFVMCQ*NPVCVS Trigger: AGAAACACATACTGGATTGCACTGACACATCACGAA...TTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR TCA 90 bp | TGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACCAGTATGTGTTTCTTTaGAGTTGGGATTTAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CNYGVSIYHQMHYIDQGNQYVFL*SWDLRN Trigger: GTTCCTTAAATCCCAACTTCAAAGAAACACATACTG...GTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR GCA 90 bp | ACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGAATAATAACATTTCATaGCACAGCAGAACCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: TMGFPFITKCIILIRETENNNIS*HSRTSI Trigger: GATACTGGTTCTGCTGTGGCATGAAATGTTATTATT...CTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS TCA 90 bp | TCTGGGCCTTTGAGTCTCCTCAGGCCTCACTGGGTTCTGCAACCCTaGAGACTTATGAAATCTCAGAGTTGTGTAAGTGACCTCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SGPLSLLRPHWVLQP*RLMKSQSCVSDLLL Trigger: GAGCAGGAGGTCACTTACACAACTCTGAGATTTCATAAGTCTTCAGGGTTGCAGAACCCAGTGAGGCCTGAGGAGACTCAAAGGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS TCA 90 bp | GAAACAGAGGATTCCAAGAACTATCACAATGAACTTCCAGGGGACTaGACACTCTCTGTGGCCCACATCTCTGGGCCTTTGAGTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ETEDSKNYHNELPGD*TLSVAHISGPLSLL Trigger: GAGGAGACTCAAAGGCCCAGAGATGTGGGCCACAGAGAGTGTTCAGTCCCCTGGAAGTTCATTGTGATAGTTCTTGGAATCCTCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS-3UTR CAA 90 bp | CCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGACAGAAAGACAACACATCTCTGGGCCTTaGAGTCTCCTCAGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: PFITKCIILIRETETERQHISGP*SLLRPH Trigger: GTGAGGCCTGAGGAGACTCAAAGGCCCAGAGATGTG...TTGTCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS CCA 90 bp | ATCCCTCTGCAGAGCAGATTGAGTTCTTCCCTTGGCACAGCTCCCTaGAATAGGGAATTTATTCAATCTCTTTTCACAAATACAACCATG | + |
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Preference number: 5 (lower is better) Translates to: IPLQSRLSSSLGTAP*NREFIQSLFTNTTM Trigger: CATGGTTGTATTTGTGAAAAGAGATTGAATAAATTCCCTATTCCAGGGAGCTGTGCCAAGGGAAGAACTCAATCTGCTCTGCAGAGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS-3UTR CAA 90 bp | TGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACCCTCTGCAGAGCAGATaGAGTTCTTCCCTTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: CNYGVSIYHQMHYIDQGNPLQSR*SSSLGT Trigger: TGTGCCAAGGGAAGAACTCAATCTGCTCTGCAGAGG...GTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS TCA 90 bp | ATGAGATGGCAGAGGGATAAATCTTCAATGAAACTTTGCTCTTCTTaGGCCGGTTTAGATGGTCTATCACCAATCTGTTGCGATTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: MRWQRDKSSMKLCSS*AGLDGLSPICCDSS Trigger: AGAGGAATCGCAACAGATTGGTGATAGACCATCTAAACCGGCTCAAGAAGAGCAAAGTTTCATTGAAGATTTATCCCTCTGCCATCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088867.7 |
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| CDS-3UTR CAA 90 bp | TTCAGGAAACAGAGTGATTCTTCAAAGCTTAGGGCAAAGAGTGTCCATTCTTCACAATCTAAAACAATCTaGGTTTTCCTGAGGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: FRKQSDSSKLRAKSVHSSQSKTI*VFLRHL Trigger: CAGATGCCTCAGGAAAACCAAGATTGTTTTAGATTG...TGAAGAATGGACACTCTTTGCCCTAAGCTTTGAAGAATCACTCTGTTTCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR CAA 90 bp | ACTGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAATATCCTTCCACTTGCTaGCCTTTGTTCTGTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: TATMGFPFITKCIILIREYPSTC*PLFCEQ Trigger: TTGCTCACAGAACAAAGGCAAGCAAGTGGAAGGATA...TTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR CAA 90 bp | TGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACTCCACTTGCTTGCCTTaGTTCTGTGAGCAATCTAAA | + |
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Preference number: 5 (lower is better) Translates to: CNYGVSIYHQMHYIDQGNSTCLP*FCEQSK Trigger: TTTAGATTGCTCACAGAACAAAGGCAAGCAAGTGGA...GTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS-3UTR CAA 90 bp | ACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACAGAGTCTATCACCAATCTGTaGCGATTCCTCTTTGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TMGFPFITKCIILIRETESITNL*RFLFAF Trigger: GAAAGCAAAGAGGAATCGCAACAGATTGGTGATAGA...CTCTGTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS TCA 90 bp | ATTTCTTCCATTAAGGAGCTGTCATTTTTCATGACCTGGTACTCTTaGCGGAGGTTATTTAGAGTTTTCTCCTGTTCATGTTTCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: ISSIKELSFFMTWYS*RRLFRVFSCSCFSC Trigger: ACAAGAGAAACATGAACAGGAGAAAACTCTAAATAACCTCCGTCAAGAGTACCAGGTCATGAAAAATGACAGCTCCTTAATGGAAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS-3UTR CAA 90 bp | TGCAACTATGGGGTTTCCATTTATCACCAAATGCATTATATTGATCAGGGAAACCCAGTATGTGTTTCTTaGAAGTTGGGATTTAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: CNYGVSIYHQMHYIDQGNPVCVS*KLGFKE Trigger: TTCCTTAAATCCCAACTTCAAAGAAACACATACTGG...GTTTCCCTGATCAATATAATGCATTTGGTGATAAATGGAAACCCCATAGTTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032306.15 |
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| CDS TCA 72 bp | ACTGAACACTCTCTGTGGCCCACATCTCTGGGCCTTTaGGTCTCCTCAGGCCTCACTGGGTTCTGCAACCCT | + |
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Preference number: 6 (lower is better) Translates to: TEHSLWPTSLGL*VSSGLTGFCNP Trigger: AGGGTTGCAGAACCCAGTGAGGCCTGAGGAGACTCAAAGGCCCAGAGATGTGGGCCACAGAGAGTGTTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS TCA 72 bp | GATTCCAAGAACTATCACAATGAACTTCCAGGGGACTaGACACTCTCTGTGGCCCACATCTCTGGGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: DSKNYHNELPGD*TLSVAHISGPL Trigger: CAAAGGCCCAGAGATGTGGGCCACAGAGAGTGTTCAGTCCCCTGGAAGTTCATTGTGATAGTTCTTGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS GCA 72 bp | TCATGCCACAGCAGAACCAGTATCCTTCCACTTGCTTaGCTTTGTTCTGTGAGCAATCTAAAACAATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SCHSRTSILPLA*LCSVSNLKQSW Trigger: CCAAGATTGTTTTAGATTGCTCACAGAACAAAGGCAAGCAAGTGGAAGGATACTGGTTCTGCTGTGGCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS GCA 72 bp | CATTTCATGCCACAGCAGAACCAGTATCCTTCCACTTaGTTGCCTTTGTTCTGTGAGCAATCTAAAACAATC | + |
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Preference number: 6 (lower is better) Translates to: HFMPQQNQYPST*LPLFCEQSKTI Trigger: GATTGTTTTAGATTGCTCACAGAACAAAGGCAAGCAAGTGGAAGGATACTGGTTCTGCTGTGGCATGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS CAA 72 bp | CCACAGCAGAACCAGTATCCTTCCACTTGCTTGCCTTaGTTCTGTGAGCAATCTAAAACAATCTTGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: PQQNQYPSTCLP*FCEQSKTILVF Trigger: GAAAACCAAGATTGTTTTAGATTGCTCACAGAACAAAGGCAAGCAAGTGGAAGGATACTGGTTCTGCTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS CAA 72 bp | TTCATGCCACAGCAGAACCAGTATCCTTCCACTTGCTaGCCTTTGTTCTGTGAGCAATCTAAAACAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: FMPQQNQYPSTC*PLFCEQSKTIL Trigger: CAAGATTGTTTTAGATTGCTCACAGAACAAAGGCAAGCAAGTGGAAGGATACTGGTTCTGCTGTGGCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS TCA 72 bp | CAGAGGGATAAATCTTCAATGAAACTTTGCTCTTCTTaGGCCGGTTTAGATGGTCTATCACCAATCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: QRDKSSMKLCSS*AGLDGLSPICC Trigger: GCAACAGATTGGTGATAGACCATCTAAACCGGCTCAAGAAGAGCAAAGTTTCATTGAAGATTTATCCCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088867.7 |
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| CDS GCA 72 bp | CTGTTGCGATTCCTCTTTGCTTTCGTGATGTGTCAGTaGAATCCAGTATGTGTTTCTTTGAAGTTGGGATTT | + |
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Preference number: 6 (lower is better) Translates to: LLRFLFAFVMCQ*NPVCVSLKLGF Trigger: AAATCCCAACTTCAAAGAAACACATACTGGATTGCACTGACACATCACGAAAGCAAAGAGGAATCGCAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS CCA 72 bp | CAGAGCAGATTGAGTTCTTCCCTTGGCACAGCTCCCTaGAATAGGGAATTTATTCAATCTCTTTTCACAAAT | + |
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Preference number: 6 (lower is better) Translates to: QSRLSSSLGTAP*NREFIQSLFTN Trigger: ATTTGTGAAAAGAGATTGAATAAATTCCCTATTCCAGGGAGCTGTGCCAAGGGAAGAACTCAATCTGCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS CCA 72 bp | TTCAATGAAACTTTGCTCTTCTTGAGCCGGTTTAGATaGTCTATCACCAATCTGTTGCGATTCCTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: FNETLLFLSRFR*SITNLLRFLFA Trigger: AGCAAAGAGGAATCGCAACAGATTGGTGATAGACCATCTAAACCGGCTCAAGAAGAGCAAAGTTTCATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088867.7 |
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| CDS CAA 72 bp | TTCGTGATGTGTCAGTGCAATCCAGTATGTGTTTCTTaGAAGTTGGGATTTAAGGAACTTCAATTCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: FVMCQCNPVCVS*KLGFKELQFIL Trigger: GAGGATGAATTGAAGTTCCTTAAATCCCAACTTCAAAGAAACACATACTGGATTGCACTGACACATCACGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS CAA 90 bp | CTCTTTGCTTTCGTGATGTGTCAGTGCAATCCAGTATGTGTTTCTTaGAAGTTGGGATTTAAGGAACTTCAATTCATCCTCATCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: LFAFVMCQCNPVCVS*KLGFKELQFILIIC Trigger: ACAAATGATGAGGATGAATTGAAGTTCCTTAAATCCCAACTTCAAAGAAACACATACTGGATTGCACTGACACATCACGAAAGCAAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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| CDS TCA 72 bp | GGGAATTTATTCAATCTCTTTTCACAAATACAACCATaGTTTCTAGCACGGTCATCCTCTTCTGTAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GNLFNLFSQIQP*FLARSSSSVEN Trigger: ATTTTCTACAGAAGAGGATGACCGTGCTAGAAATCATGGTTGTATTTGTGAAAAGAGATTGAATAAATTCCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032306.15 ENSMUST00000088867.7 |
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