RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLRA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079853

Ensembl transcript IDs: ENSMUST00000032288.6

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTTAGAGTTTATGCAAACAAATAAAACAGATTCGTCCAAGCTTTaGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGGGAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: LLEFMQTNKTDSSKL*GIREDLSSLNREGR
Trigger: TCTTCCTTCCCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGACGAATCTGTTTTATTTGTTTGCATAAACTCTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
3UTR CCA 72 bp TTTATGCAAACAAATAAAACAGATTCGTCCAAGCTTTaGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGG +
Preference number: 3 (lower is better)
Translates to: FMQTNKTDSSKL*GIREDLSSLNR
Trigger: CCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGACGAATCTGTTTTATTTGTTTGCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CCA 90 bp TCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGGGAAGGAAGATCAGAAGGGATAAACTaGAACTCTGGCAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: SKLWGIREDLSSLNREGRSEGIN*NSGRSV
Trigger: AACAGACCTGCCAGAGTTCCAGTTTATCCCTTCTGA...TCTTCCTTCCCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR TCA 90 bp TCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGGGAAGGAAGAATGAAATCTCACCATTaGATAAGTGACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKLWGIREDLSSLNREGRMKSHH*ISDLLL
Trigger: GAGCAGGAGGTCACTTATTCAATGGTGAGATTTCAT...TCTTCCTTCCCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR TCA 90 bp CCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGGGAAGGAAGATCAAGAGCTATCACAATaGACTTCCAGTGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: PSFGVSEKICPVSTGKEDQELSQ*TSSGMN
Trigger: GTTCATTCCACTGGAAGTTCATTGTGATAGCTCTTG...ATCTTCCTTCCCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR TCA 90 bp CAAATAAAACAGATTCGTCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTGTTCTGATCCCTGTTaGGGGATTCCAGAAGATCAC +
Preference number: 4 (lower is better)
Translates to: QIKQIRPSFGVSEKICPVCSDPC*GIPEDH
Trigger: GTGATCTTCTGGAATCCCTCAACAGGGATCAGAACA...GACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGACGAATCTGTTTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR GCA 90 bp TCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGGGAAGGAAGAAAGTTGATGTCACTTTaGATGTTGCTGCAGTTATTG +
Preference number: 4 (lower is better)
Translates to: SKLWGIREDLSSLNREGRKLMSL*MLLQLL
Trigger: CAATAACTGCAGCAACATGCAAAGTGACATCAACTT...TCTTCCTTCCCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR TCA 90 bp AAAACAGATTCGTCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACTTTTATTGCCAACACTaGAACAGCTACCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KTDSSKLWGIREDLSSLNFYCQH*NSYQKK
Trigger: CTTCTTCTGGTAGCTGTTTCAGTGTTGGCAATAAAA...GTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGACGAATCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR TCA 90 bp AATCTTCCAGATTTTCTCTCTCTCTCTTTGCACTGCAGACTAAGTCCAATGGTCTTATACAATCTGTTCTaGTCCCTGTTGAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: NLPDFLSLSLHCRLSPMVLYNLF*SLLRDS
Trigger: GGAATCCCTCAACAGGGATCAGAACAGATTGTATAA...GACCATTGGACTTAGTCTGCAGTGCAAAGAGAGAGAGAGAAAATCTGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CCA 90 bp AAAACAGATTCGTCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACCTGCAGTTATTGTGGTaGTTTAGAAATTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KTDSSKLWGIREDLSSLNLQLLW*FRNSCS
Trigger: ACTGCAGGAATTTCTAAACCACCACAATAACTGCAG...GTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGACGAATCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR TCA 90 bp TTCCCAAAATCTTCCAGATTTTCTCTCTCTCTCTTTGCACTGCAGACTAAGTCCTCCCACAAATACAGATaGATACTTGATCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: FPKSSRFSLSLFALQTKSSHKYR*ILDHSY
Trigger: GTAACTGTGATCAAGTATTCATCTGTATTTGTGGGA...GGACTTAGTCTGCAGTGCAAAGAGAGAGAGAGAAAATCTGGAAGATTTTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CCA 90 bp AGAGAATATTCCCAAAATCTTCCAGATTTTCTCTCTCTCTCTTTGCACTGCAGATTGCTGCAGTTATTGTaGTGGTTTAGAAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: REYSQNLPDFLSLSLHCRLLQLL*WFRNSC
Trigger: GCAGGAATTTCTAAACCACCACAATAACTGCAGCAA...TCTGCAGTGCAAAGAGAGAGAGAGAAAATCTGGAAGATTTTGGGAATATTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR GCA 90 bp CTGCTCTGTCATGTCATGTTTCAGAGAATATTCCCAAAATCTTCCAGATTTTCTTTGTTTCTGCAATCCTaGAGATTTATGAAATCTCAC +
Preference number: 4 (lower is better)
Translates to: LLCHVMFQRIFPKSSRFSLFLQS*RFMKSH
Trigger: GTGAGATTTCATAAATCTGCAGGATTGCAGAAACAA...AGAAAATCTGGAAGATTTTGGGAATATTCTCTGAAACATGACATGACAGAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS TCA 90 bp GAAACAGAAGATGCCAAGAGCTATCACAATGAACTTCCAGTGGAATaGACACCTTCTGTAGCCAGCTTCTCTGGGCCCTTTAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ETEDAKSYHNELPVE*TPSVASFSGPFSLL
Trigger: GAGGAGACTAAAGGGCCCAGAGAAGCTGGCTACAGAAGGTGTTCATTCCACTGGAAGTTCATTGTGATAGCTCTTGGCATCTTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS TCA 90 bp CAGCTACCAGAAGAAGGAAACAGAAGATGCCAAGAGCTATCACAATaGACTTCCAGTGGAATGAACACCTTCTGTAGCCAGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QLPEEGNRRCQELSQ*TSSGMNTFCSQLLW
Trigger: CCAGAGAAGCTGGCTACAGAAGGTGTTCATTCCACTGGAAGTTCATTGTGATAGCTCTTGGCATCTTCTGTTTCCTTCTTCTGGTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CAA 90 bp CGTCCAAGCTTTGGGGTATCAGAGAAGATCTGTCCAGTCTCAACAGGGAAGGAAATTTCATCCTTCAAGTaGATGTCACTTTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: RPSFGVSEKICPVSTGKEISSFK*MSLCML
Trigger: CAACATGCAAAGTGACATCAACTTGAAGGATGAAAT...TTCCTTCCCTGTTGAGACTGGACAGATCTTCTCTGATACCCCAAAGCTTGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS CCA 90 bp AGTTCATCCTCATCATCTATCTTCAGAAGGGATAAACTGGAACTCTaGCAGGTCTGTTTACATCCACTCCATGTTTTTCTGTCCATGACG +
Preference number: 5 (lower is better)
Translates to: SSSSSSIFRRDKLEL*QVCLHPLHVFLSMT
Trigger: CGTCATGGACAGAAAAACATGGAGTGGATGTAAACAGACCTGCCAGAGTTCCAGTTTATCCCTTCTGAAGATAGATGATGAGGATGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CAA 90 bp AATCTTCCAGATTTTCTCTCTCTCTCTTTGCACTGCAGACTAAGTCCAATGGTCCAAGTTGATGTCACTTaGCATGTTGCTGCAGTTATT +
Preference number: 5 (lower is better)
Translates to: NLPDFLSLSLHCRLSPMVQVDVT*HVAAVI
Trigger: AATAACTGCAGCAACATGCAAAGTGACATCAACTTG...GACCATTGGACTTAGTCTGCAGTGCAAAGAGAGAGAGAGAAAATCTGGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CAA 90 bp GAGAATATTCCCAAAATCTTCCAGATTTTCTCTCTCTCTCTTTGCACTGCAGACATGTTGCTGCAGTTATaGTGGTGGTTTAGAAATTCC +
Preference number: 5 (lower is better)
Translates to: ENIPKIFQIFSLSLCTADMLLQL*WWFRNS
Trigger: GGAATTTCTAAACCACCACAATAACTGCAGCAACAT...GTCTGCAGTGCAAAGAGAGAGAGAGAAAATCTGGAAGATTTTGGGAATATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS TCA 90 bp AACTCTGGCAGGTCTGTTTACATCCACTCCATGTTTTTCTGTCCATaGCGAAATAATAACATTTCATACCATAGCAGAACCAGTATACTT +
Preference number: 5 (lower is better)
Translates to: NSGRSVYIHSMFFCP*RNNNISYHSRTSIL
Trigger: AAGTATACTGGTTCTGCTATGGTATGAAATGTTATTATTTCGTCATGGACAGAAAAACATGGAGTGGATGTAAACAGACCTGCCAGAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS GCA 90 bp ATAGACTTATTTTTCAGCATTTCATCCTTCAAGTTGATGTCACTTTaGATGTTGCTGCAGTTATTGTGGTGGTTTAGAAATTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: IDLFFSISSFKLMSL*MLLQLLWWFRNSCS
Trigger: ACTGCAGGAATTTCTAAACCACCACAATAACTGCAGCAACATGCAAAGTGACATCAACTTGAAGGATGAAATGCTGAAAAATAAGTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS-3UTR CAA 90 bp TTTATGCAAACAAATAAAACAGATTCGTCCAAGCTTTGGGGTATCAGAGAAGATCCCCCATCTCTTATATaGTATTTCCTTGTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: FMQTNKTDSSKLWGIREDPPSLI*YFLVFK
Trigger: CTTGAACACAAGGAAATACAATATAAGAGATGGGGG...ATCTTCTCTGATACCCCAAAGCTTGGACGAATCTGTTTTATTTGTTTGCATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS TCA 72 bp GATGCCAAGAGCTATCACAATGAACTTCCAGTGGAATaGACACCTTCTGTAGCCAGCTTCTCTGGGCCCTTT +
Preference number: 6 (lower is better)
Translates to: DAKSYHNELPVE*TPSVASFSGPF
Trigger: AAAGGGCCCAGAGAAGCTGGCTACAGAAGGTGTTCATTCCACTGGAAGTTCATTGTGATAGCTCTTGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS TCA 72 bp GAAGAAGGAAACAGAAGATGCCAAGAGCTATCACAATaGACTTCCAGTGGAATGAACACCTTCTGTAGCCAG +
Preference number: 6 (lower is better)
Translates to: EEGNRRCQELSQ*TSSGMNTFCSQ
Trigger: CTGGCTACAGAAGGTGTTCATTCCACTGGAAGTTCATTGTGATAGCTCTTGGCATCTTCTGTTTCCTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS CCA 72 bp GTTCATCCTCATCATCTATCTTCAGAAGGGATAAACTaGAACTCTGGCAGGTCTGTTTACATCCACTCCATG +
Preference number: 6 (lower is better)
Translates to: VHPHHLSSEGIN*NSGRSVYIHSM
Trigger: CATGGAGTGGATGTAAACAGACCTGCCAGAGTTCCAGTTTATCCCTTCTGAAGATAGATGATGAGGATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS CCA 72 bp TCATCATCTATCTTCAGAAGGGATAAACTGGAACTCTaGCAGGTCTGTTTACATCCACTCCATGTTTTTCTG +
Preference number: 6 (lower is better)
Translates to: SSSIFRRDKLEL*QVCLHPLHVFL
Trigger: CAGAAAAACATGGAGTGGATGTAAACAGACCTGCCAGAGTTCCAGTTTATCCCTTCTGAAGATAGATGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS TCA 72 bp GAGGGAATTTATCCAGTCTCTTCCCACAAATACAGATaGATACTTGATCACAGTTACCATTGTCTAGTCTTG +
Preference number: 6 (lower is better)
Translates to: EGIYPVSSHKYR*ILDHSYHCLVL
Trigger: CAAGACTAGACAATGGTAACTGTGATCAAGTATTCATCTGTATTTGTGGGAAGAGACTGGATAAATTCCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS CAA 90 bp AGATCACACTCTATAGACTTATTTTTCAGCATTTCATCCTTCAAGTaGATGTCACTTTGCATGTTGCTGCAGTTATTGTGGTGGTTTAGA +
Preference number: 6 (lower is better)
Translates to: RSHSIDLFFSISSFK*MSLCMLLQLLWWFR
Trigger: TCTAAACCACCACAATAACTGCAGCAACATGCAAAGTGACATCAACTTGAAGGATGAAATGCTGAAAAATAAGTCTATAGAGTGTGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS CAA 90 bp TCTAGTCTTGTTTTAGATAACAACATACATCCCCCATCTCTTATATaGTATTTCCTTGTGTTCAAGGCAAGTTTAGATGGGCGATTGTCA +
Preference number: 6 (lower is better)
Translates to: SSLVLDNNIHPPSLI*YFLVFKASLDGRLS
Trigger: TGACAATCGCCCATCTAAACTTGCCTTGAACACAAGGAAATACAATATAAGAGATGGGGGATGTATGTTGTTATCTAAAACAAGACTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS GCA 72 bp TTTTTCAGCATTTCATCCTTCAAGTTGATGTCACTTTaGATGTTGCTGCAGTTATTGTGGTGGTTTAGAAAT +
Preference number: 6 (lower is better)
Translates to: FFSISSFKLMSL*MLLQLLWWFRN
Trigger: ATTTCTAAACCACCACAATAACTGCAGCAACATGCAAAGTGACATCAACTTGAAGGATGAAATGCTGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6
CDS CAA 72 bp GTTTTAGATAACAACATACATCCCCCATCTCTTATATaGTATTTCCTTGTGTTCAAGGCAAGTTTAGATGGG +
Preference number: 6 (lower is better)
Translates to: VLDNNIHPPSLI*YFLVFKASLDG
Trigger: CCCATCTAAACTTGCCTTGAACACAAGGAAATACAATATAAGAGATGGGGGATGTATGTTGTTATCTAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032288.6