Pregenerated sensors for KLK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050063Ensembl transcript IDs: ENSMUST00000107966.10, ENSMUST00000107967.3, ENSMUST00000107968.10, ENSMUST00000177514.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGAAGGCTCTGAGAGCAGGGCAGGGCTTCAGGGAGAGAGAGTATaGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGT | + |
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Preference number: 1 (lower is better) Translates to: SEGSESRAGLQGERV*SQRGSEASWGRTGC Trigger: ACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGCCCTGCTCTCAGAGCCTTCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCACTGAGCATTTCTCCAGCTCCGTTAGTATCCCAATTTTACAGATGAGATACCAGGGTCAGAGCTaGACATCTGAAGGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LATEHFSSSVSIPILQMRYQGQS*TSEGSE Trigger: CTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTA...TCTCATCTGTAAAATTGGGATACTAACGGAGCTGGAGAAATGCTCAGTGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107968.10 |
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| 3UTR CCA 72 bp | TGTGTCACTACATTTATTAAGTACCAGGGTCAGAGCTaGACATCTGAAGGCTCTGAGAGCAGGGCAGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: CVTTFIKYQGQS*TSEGSESRAGL Trigger: AAGCCCTGCCCTGCTCTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTACTTAATAAATGTAGTGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| 3UTR GCA 72 bp | GCAACGATTGAGCAAAGTAGATTTAGCAGTGTTCTGTaGTCTGTGTCACTACATTTATTAAGTACCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ATIEQSRFSSVL*SVSLHLLSTRV Trigger: GACCCTGGTACTTAATAAATGTAGTGACACAGAGCACAGAACACTGCTAAATCTACTTTGCTCAATCGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107968.10 |
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| 3UTR TCA 72 bp | ATTTCTCCAGCTCCGTTAGTATCCCAATTTTACAGATaGGAGCATTCACACTCTAAAGAAAAGCACTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: ISPAPLVSQFYR*EHSHSKEKHFP Trigger: TGGGAAGTGCTTTTCTTTAGAGTGTGAATGCTCTCATCTGTAAAATTGGGATACTAACGGAGCTGGAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | GCAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGACACAGCAAGTGACCTaGGGTGTAGAGGGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AGLQGERVWSQRGSEASWTQQVT*GVEGSL Trigger: CAGGCTGCCCTCTACACCTCAGGTCACTTGCTGTGT...CCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | TCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACCCCACTGTGGGTCAATaGGGACCCCACCACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SGRESMEPARVRGVVGENPTVGQ*GPHHTA Trigger: TGCTGTGTGGTGGGGTCCTCATTGACCCACAGTGGG...GTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGCCCACTGTGGGTCAATaGGGACCCCACCACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: REREYGASEGQRRRGGELPTVGQ*GPHHTA Trigger: TGCTGTGTGGTGGGGTCCTCATTGACCCACAGTGGG...CAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | GGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAACACCATGCTCTGGGTaGTCTTGCCAGGGTAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GFREREYGASEGQRRRGGTPCSG*SCQGRH Trigger: GTGCCTACCCTGGCAAGATCACCCAGAGCATGGTGT...TCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCCCCACTGTGGGTCAATaGGGACCCCACCACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RVWSQRGSEASWGRTGCLPTVGQ*GPHHTA Trigger: TGCTGTGTGGTGGGGTCCTCATTGACCCACAGTGGG...GAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | CAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGCACCATTTTCCATCTTaGCCCAGCCCAGGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QGFREREYGASEGQRRRGHHFPS*PSPGSG Trigger: GCCAGATCCTGGGCTGGGGCAAGATGGAAAATGGTG...CCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | GAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATACACAGCAAGTGACCTaGGGTGTAGAGGGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: EREYGASEGQRRRGGELDTQQVT*GVEGSL Trigger: CAGGCTGCCCTCTACACCTCAGGTCACTTGCTGTGT...ATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCACACCATGCTCTGGGTaGTCTTGCCAGGGTAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RVWSQRGSEASWGRTGCLTPCSG*SCQGRH Trigger: GTGCCTACCCTGGCAAGATCACCCAGAGCATGGTGT...GAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | TCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTCCTGGCTTCTCCTTTaGTCCACAGGGCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SGRESMEPARVRGVVGENSWLLL*STGHVT Trigger: GGTGACATGCCCTGTGGATCAAAGGAGAAGCCAGGA...GTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGTCCTGGCTTCTCCTTTaGTCCACAGGGCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: REREYGASEGQRRRGGELSWLLL*STGHVT Trigger: GGTGACATGCCCTGTGGATCAAAGGAGAAGCCAGGA...CAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | AGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGCACCATTTTCCATCTTaGCCCAGCCCAGGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: REREYGASEGQRRRGGELHHFPS*PSPGSG Trigger: GCCAGATCCTGGGCTGGGGCAAGATGGAAAATGGTG...CAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | TACCAGGGTCAGAGCTGGACATCTGAAGGCTCTGAGAGCAGGGCAGGGCTTCAGACACCATGCTCTGGGTaGTCTTGCCAGGGTAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: YQGQSWTSEGSESRAGLQTPCSG*SCQGRH Trigger: GTGCCTACCCTGGCAAGATCACCCAGAGCATGGTGT...CTGAAGCCCTGCCCTGCTCTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | TTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAATCCTGGCTTCTCCTTTaGTCCACAGGGCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: FREREYGASEGQRRRGGESWLLL*STGHVT Trigger: GGTGACATGCCCTGTGGATCAAAGGAGAAGCCAGGA...TTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | GAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCACCATTTTCCATCTTaGCCCAGCCCAGGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ESMEPARVRGVVGENWMSHHFPS*PSPGSG Trigger: GCCAGATCCTGGGCTGGGGCAAGATGGAAAATGGTG...AGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACCCAGGATCTGGCAGTTaGGATTCTCCTCAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGRESMEPARVRGVVGENPGSGS*DSPQSS Trigger: ACTGCTCTGAGGAGAATCCCAACTGCCAGATCCTGG...GTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | GGGCAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTTGGACATCAGCACACTaGATGGTATCTGGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GQGFREREYGASEGQRRRWTSAH*MVSGKS Trigger: TGACTTCCCAGATACCATTCAGTGTGCTGATGTCCA...ACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | GAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTTTCTTTCATGTCGCCTaGGCACACCATGCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ESMEPARVRGVVGENWMSFFHVA*AHHALG Trigger: ACCCAGAGCATGGTGTGCGCAGGCGACATGAAAGAA...AGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGTGGACATCAGCACACTaGATGGTATCTGGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: REREYGASEGQRRRGGELWTSAH*MVSGKS Trigger: TGACTTCCCAGATACCATTCAGTGTGCTGATGTCCA...CAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | GGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAACAGCCACTTGTTTCTaGGGATGTTTTGGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: GFREREYGASEGQRRRGGTATCF*GCFGSI Trigger: GATGGATCCAAAACATCCTCAGAAACAAGTGGCTGT...TCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | AGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCATTTCTTTCATGTCGCCTaGGCACACCATGCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SMEPARVRGVVGENWMSHFFHVA*AHHALG Trigger: ACCCAGAGCATGGTGTGCGCAGGCGACATGAAAGAA...ATGAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | AGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCATCCAGGATCTGGCAGTTaGGATTCTCCTCAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SMEPARVRGVVGENWMSHPGSGS*DSPQSS Trigger: ACTGCTCTGAGGAGAATCCCAACTGCCAGATCCTGG...ATGAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | GCAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGACTGAGATTTGCCTTTaGAAAGTCTCTGTTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: AGLQGERVWSQRGSEASWTEICL*KVSVCR Trigger: ACGGCAAACAGAGACTTTCCAAAGGCAAATCTCAGT...CCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACCATCAGCACACTGAATaGTATCTGGGAAGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: SGRESMEPARVRGVVGENHQHTE*YLGSHH Trigger: ATGGTGACTTCCCAGATACCATTCAGTGTGCTGATG...GTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGAATAGTCCTGTCCACTaGGATTTGCCTTTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: REREYGASEGQRRRGGELNSPVH*DLPLES Trigger: ACTTTCCAAAGGCAAATCTCAGTGGACAGGACTATT...CAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | TACCAGGGTCAGAGCTGGACATCTGAAGGCTCTGAGAGCAGGGCAGGGCTTCAGTGGACATCAGCACACTaGATGGTATCTGGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YQGQSWTSEGSESRAGLQWTSAH*MVSGKS Trigger: TGACTTCCCAGATACCATTCAGTGTGCTGATGTCCA...CTGAAGCCCTGCCCTGCTCTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCACAGCCACTTGTTTCTaGGGATGTTTTGGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: RVWSQRGSEASWGRTGCLTATCF*GCFGSI Trigger: GATGGATCCAAAACATCCTCAGAAACAAGTGGCTGT...GAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGACAGCCACTTGTTTCTaGGGATGTTTTGGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: RESMEPARVRGVVGENWMTATCF*GCFGSI Trigger: GATGGATCCAAAACATCCTCAGAAACAAGTGGCTGT...CATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACACTGAGATTTGCCTTTaGAAAGTCTCTGTTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SGRESMEPARVRGVVGENTEICL*KVSVCR Trigger: ACGGCAAACAGAGACTTTCCAAAGGCAAATCTCAGT...GTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | GAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCATCAGCACACTGAATaGTATCTGGGAAGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: ESMEPARVRGVVGENWMSHQHTE*YLGSHH Trigger: ATGGTGACTTCCCAGATACCATTCAGTGTGCTGATG...AGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCAATAGTCCTGTCCACTaGGATTTGCCTTTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RVWSQRGSEASWGRTGCLNSPVH*DLPLES Trigger: ACTTTCCAAAGGCAAATCTCAGTGGACAGGACTATT...GAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGACTGAGATTTGCCTTTaGAAAGTCTCTGTTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: RESMEPARVRGVVGENWMTEICL*KVSVCR Trigger: ACGGCAAACAGAGACTTTCCAAAGGCAAATCTCAGT...CATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | AGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGACACTGAATGGTATCTaGGAAGTCACCATTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: REREYGASEGQRRRGGELTLNGI*EVTIFH Trigger: ATGGAAAATGGTGACTTCCCAGATACCATTCAGTGT...CAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR TCA 90 bp | AGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCATAATAGTCCTGTCCACTaGGATTTGCCTTTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: SMEPARVRGVVGENWMSHNSPVH*DLPLES Trigger: ACTTTCCAAAGGCAAATCTCAGTGGACAGGACTATT...ATGAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGACACTGAATGGTATCTaGGAAGTCACCATTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RESMEPARVRGVVGENWMTLNGI*EVTIFH Trigger: ATGGAAAATGGTGACTTCCCAGATACCATTCAGTGT...CATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGACTGGATTTTTCAGATaGACCATCATGATGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: RESMEPARVRGVVGENWMTGFFR*TIMMSL Trigger: CAATGACATCATGATGGTGCATCTGAAAAATCCAGT...CATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR GCA 90 bp | AGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCACTGGATTTTTCAGATaGACCATCATGATGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: RVWSQRGSEASWGRTGCLTGFFR*TIMMSL Trigger: CAATGACATCATGATGGTGCATCTGAAAAATCCAGT...GAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CCA 90 bp | TACCAGGGTCAGAGCTGGACATCTGAAGGCTCTGAGAGCAGGGCAGGGCTTCAGACACTGAATGGTATCTaGGAAGTCACCATTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: YQGQSWTSEGSESRAGLQTLNGI*EVTIFH Trigger: ATGGAAAATGGTGACTTCCCAGATACCATTCAGTGT...CTGAAGCCCTGCCCTGCTCTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTCCCAGGATCTGGCAGTaGGGATTCTCCTCAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GQGFREREYGASEGQRRRPRIWQ*GFSSEQ Trigger: CTGCTCTGAGGAGAATCCCAACTGCCAGATCCTGGG...ACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTTCACCATTTTCCATCTaGCCCCAGCCCAGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: GQGFREREYGASEGQRRRSPFSI*PQPRIW Trigger: CCAGATCCTGGGCTGGGGCAAGATGGAAAATGGTGA...ACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS TCA 90 bp | AATCGTTGCCTTCTTTCATGTCGCCTGCGCACACCATGCTCTGGGTaGTCTTGCCAGGGTAGGCACGCTCACACTGCTCCCGGGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: NRCLLSCRLRTPCSG*SCQGRHAHTAPGAP Trigger: TGGTGCCCCGGGAGCAGTGTGAGCGTGCCTACCCTGGCAAGATCACCCAGAGCATGGTGTGCGCAGGCGACATGAAAGAAGGCAACGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGCCCAGGATCTGGCAGTaGGGATTCTCCTCAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: RESMEPARVRGVVGENWMPRIWQ*GFSSEQ Trigger: CTGCTCTGAGGAGAATCCCAACTGCCAGATCCTGGG...CATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | GAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATTCACCATTTTCCATCTaGCCCCAGCCCAGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: EREYGASEGQRRRGGELDSPFSI*PQPRIW Trigger: CCAGATCCTGGGCTGGGGCAAGATGGAAAATGGTGA...ATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGACCATCATGATGTCATaGTCGTGGGTTTCAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QGFREREYGASEGQRRRGTIMMS*SWVSGL Trigger: CAACCCTGAAACCCACGACAATGACATCATGATGGT...CCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | TACCAGGGTCAGAGCTGGACATCTGAAGGCTCTGAGAGCAGGGCAGGGCTTCAGTCACCATTTTCCATCTaGCCCCAGCCCAGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: YQGQSWTSEGSESRAGLQSPFSI*PQPRIW Trigger: CCAGATCCTGGGCTGGGGCAAGATGGAAAATGGTGA...CTGAAGCCCTGCCCTGCTCTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS TCA 90 bp | AGGGCAGCCTGGAAAGGGTGGGAGTCCTTCAAACACGGGCCTCCATaGACCACCTTCTCCTGTTCCTCCGACCAGGCTGATTTAGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: RAAWKGWESFKHGPP*TTFSCSSDQADLAR Trigger: TCTTGCTAAATCAGCCTGGTCGGAGGAACAGGAGAAGGTGGTTCATGGAGGCCCGTGTTTGAAGGACTCCCACCCTTTCCAGGCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 ENSMUST00000177514.8 |
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| CDS GCA 90 bp | TCCAGAATCACCCTGACAGGAATCGTTGCCTTCTTTCATGTCGCCTaGGCACACCATGCTCTGGGTGATCTTGCCAGGGTAGGCACGCTC | + |
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Preference number: 5 (lower is better) Translates to: SRITLTGIVAFFHVA*AHHALGDLARVGTL Trigger: GAGCGTGCCTACCCTGGCAAGATCACCCAGAGCATGGTGTGCGCAGGCGACATGAAAGAAGGCAACGATTCCTGTCAGGGTGATTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | GAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATACCATCATGATGTCATaGTCGTGGGTTTCAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EREYGASEGQRRRGGELDTIMMS*SWVSGL Trigger: CAACCCTGAAACCCACGACAATGACATCATGATGGT...ATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS TCA 90 bp | ACACGGGCCTCCATGAACCACCTTCTCCTGTTCCTCCGACCAGGCTaGTTTAGCAAGAACCAAGCACAGGGCCAGCATCTTCATTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: TRASMNHLLLFLRPG*FSKNQAQGQHLHCQ Trigger: CTGACAATGAAGATGCTGGCCCTGTGCTTGGTTCTTGCTAAATCAGCCTGGTCGGAGGAACAGGAGAAGGTGGTTCATGGAGGCCCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 ENSMUST00000177514.8 |
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| CDS-3UTR CAA 90 bp | AGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAACTGGATGTCTCATACCATCATGATGTCATaGTCGTGGGTTTCAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SMEPARVRGVVGENWMSHTIMMS*SWVSGL Trigger: CAACCCTGAAACCCACGACAATGACATCATGATGGT...ATGAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | GCAGGGCTTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGTTTCTGAGGATGTTTaGGATCCATCTGATATGAGT | + |
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Preference number: 5 (lower is better) Translates to: AGLQGERVWSQRGSEASWVSEDV*DPSDMS Trigger: ACTCATATCAGATGGATCCAAAACATCCTCAGAAAC...CCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAAGCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | TTCAGGGAGAGAGAGTATGGAGCCAGCGAGGGTCAGAGGCGTCGTGGGGGAGAAGTTTCTGAGGATGTTTaGGATCCATCTGATATGAGT | + |
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Preference number: 5 (lower is better) Translates to: FREREYGASEGQRRRGGEVSEDV*DPSDMS Trigger: ACTCATATCAGATGGATCCAAAACATCCTCAGAAAC...TTCTCCCCCACGACGCCTCTGACCCTCGCTGGCTCCATACTCTCTCTCCCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS-3UTR CAA 90 bp | TACCAGGGTCAGAGCTGGACATCTGAAGGCTCTGAGAGCAGGGCAGGGCTTCAGGTTTCTGAGGATGTTTaGGATCCATCTGATATGAGT | + |
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Preference number: 5 (lower is better) Translates to: YQGQSWTSEGSESRAGLQVSEDV*DPSDMS Trigger: ACTCATATCAGATGGATCCAAAACATCCTCAGAAAC...CTGAAGCCCTGCCCTGCTCTCAGAGCCTTCAGATGTCCAGCTCTGACCCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS TCA 72 bp | TGGGTCAATGAGGACCCCACCACACAGCAAGTGACCTaGGGTGTAGAGGGCAGCCTGGAAAGGGTGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: WVNEDPTTQQVT*GVEGSLERVGV Trigger: GACTCCCACCCTTTCCAGGCTGCCCTCTACACCTCAGGTCACTTGCTGTGTGGTGGGGTCCTCATTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 ENSMUST00000177514.8 |
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| CDS TCA 72 bp | CTTCTTTCATGTCGCCTGCGCACACCATGCTCTGGGTaGTCTTGCCAGGGTAGGCACGCTCACACTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LLSCRLRTPCSG*SCQGRHAHTAP Trigger: GGGAGCAGTGTGAGCGTGCCTACCCTGGCAAGATCACCCAGAGCATGGTGTGCGCAGGCGACATGAAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS GCA 72 bp | ACCCTGACAGGAATCGTTGCCTTCTTTCATGTCGCCTaGGCACACCATGCTCTGGGTGATCTTGCCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TLTGIVAFFHVA*AHHALGDLARV Trigger: TACCCTGGCAAGATCACCCAGAGCATGGTGTGCGCAGGCGACATGAAAGAAGGCAACGATTCCTGTCAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS GCA 72 bp | CTAGGGGACCTCCAGAATCACCCTGACAGGAATCGTTaGCTTCTTTCATGTCGCCTGCGCACACCATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGDLQNHPDRNR*LLSCRLRTPCS Trigger: AGAGCATGGTGTGCGCAGGCGACATGAAAGAAGGCAACGATTCCTGTCAGGGTGATTCTGGAGGTCCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS CCA 72 bp | GGGCACCAGATGGACATCAGCACACTGAATGGTATCTaGGAAGTCACCATTTTCCATCTTGCCCCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GHQMDISTLNGI*EVTIFHLAPAQ Trigger: CTGGGCTGGGGCAAGATGGAAAATGGTGACTTCCCAGATACCATTCAGTGTGCTGATGTCCATCTGGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS CAA 72 bp | CCATTTTCCATCTTGCCCCAGCCCAGGATCTGGCAGTaGGGATTCTCCTCAGAGCAGTCATTCTTCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PFSILPQPRIWQ*GFSSEQSFFKG Trigger: GCCCTTGAAGAATGACTGCTCTGAGGAGAATCCCAACTGCCAGATCCTGGGCTGGGGCAAGATGGAAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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| CDS TCA 72 bp | TCCATGAACCACCTTCTCCTGTTCCTCCGACCAGGCTaGTTTAGCAAGAACCAAGCACAGGGCCAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: SMNHLLLFLRPG*FSKNQAQGQHL Trigger: AAGATGCTGGCCCTGTGCTTGGTTCTTGCTAAATCAGCCTGGTCGGAGGAACAGGAGAAGGTGGTTCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 ENSMUST00000177514.8 |
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| CDS CCA 72 bp | GGATGGACAATAGTCCTGTCCACTGAGATTTGCCTTTaGAAAGTCTCTGTTTGCCGTAGGTTGTGTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GWTIVLSTEICL*KVSVCRRLCFP Trigger: GGGGAAACACAACCTACGGCAAACAGAGACTTTCCAAAGGCAAATCTCAGTGGACAGGACTATTGTCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 ENSMUST00000177514.8 |
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| CDS CAA 90 bp | GAGCAGTCATTCTTCAAGGGCAGAGGCTGGATCTTTTTAGAGAATTaGACTGGATTTTTCAGATGCACCATCATGATGTCATTGTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: EQSFFKGRGWIFLEN*TGFFRCTIMMSLSW Trigger: CCACGACAATGACATCATGATGGTGCATCTGAAAAATCCAGTCAAATTCTCTAAAAAGATCCAGCCTCTGCCCTTGAAGAATGACTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107966.10 ENSMUST00000107967.3 ENSMUST00000107968.10 |
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