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Pregenerated sensors for KLK1B27 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063177

Ensembl transcript IDs: ENSMUST00000079859.7

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAACCCAGTTGGGGTCCAACAGGACTCCCCCGCATATATATTTGTTaGAGCGGAGCACAGCCACATGCCAGGGTTGAGAATTCTTCTTAC +
Preference number: 5 (lower is better)
Translates to: EPSWGPTGLPRIYIC*SGAQPHARVENSSY
Trigger: GTAAGAAGAATTCTCAACCCTGGCATGTGGCTGTGCTCCGCTCCAACAAATATATATGCGGGGGAGTCCTGTTGGACCCCAACTGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS TCA 90 bp CCGCATATATATTTGTTGGAGCGGAGCACAGCCACATGCCAGGGTTaGGAATTCTTCTTACATTTAAATCCTCCAATTATTCTAGACTGG +
Preference number: 5 (lower is better)
Translates to: PHIYLLERSTATCQG*EFFLHLNPPIILDW
Trigger: CCAGTCTAGAATAATTGGAGGATTTAAATGTAAGAAGAATTCTCAACCCTGGCATGTGGCTGTGCTCCGCTCCAACAAATATATATGCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS TCA 72 bp GGCTCATGTTGTAGTCAGGGTGGGGGAAGCTTTTGCTaGCCCATCGGTGCTGAGCAGAGGGTTCACGTTGGA +
Preference number: 6 (lower is better)
Translates to: GSCCSQGGGSFC*PIGAEQRVHVG
Trigger: TCCAACGTGAACCCTCTGCTCAGCACCGATGGGTCAGCAAAAGCTTCCCCCACCCTGACTACAACATGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CCA 72 bp TGGGGTCCAACAGGACTCCCCCGCATATATATTTGTTaGAGCGGAGCACAGCCACATGCCAGGGTTGAGAAT +
Preference number: 6 (lower is better)
Translates to: WGPTGLPRIYIC*SGAQPHARVEN
Trigger: ATTCTCAACCCTGGCATGTGGCTGTGCTCCGCTCCAACAAATATATATGCGGGGGAGTCCTGTTGGACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CAA 72 bp TCAGCAGGCTTGCTGAGACGGAGCAGCATCAGGTCATaGCTCTTGTCCTCAGGATGTGGGATGTGGTCATTC +
Preference number: 6 (lower is better)
Translates to: SAGLLRRSSIRS*LLSSGCGMWSF
Trigger: GAATGACCACATCCCACATCCTGAGGACAAGAGCAATGACCTGATGCTGCTCCGTCTCAGCAAGCCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CCA 72 bp GAGCAGCATCAGGTCATTGCTCTTGTCCTCAGGATGTaGGATGTGGTCATTCAGGAGGCTCATGTTGTAGTC +
Preference number: 6 (lower is better)
Translates to: EQHQVIALVLRM*DVVIQEAHVVV
Trigger: GACTACAACATGAGCCTCCTGAATGACCACATCCCACATCCTGAGGACAAGAGCAATGACCTGATGCTGCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CCA 72 bp CCAGGAGGTAAACTTAATAAGTTTTGTGAAGACGCCTaGCGCATTGGGTTTAGCGCATGGGATAGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: PGGKLNKFCEDA*RIGFSAWDRAP
Trigger: TGGGGCTCTATCCCATGCGCTAAACCCAATGCGCCAGGCGTCTTCACAAAACTTATTAAGTTTACCTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CCA 72 bp GGGCAGGAGCTTGATGAACACACACTGAAGATCATTTaGGATTTGGTATTTTGTGGGTGTAATGCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: GQELDEHTLKII*DLVFCGCNAAP
Trigger: TGGGGCAGCATTACACCCACAAAATACCAAATCCCAAATGATCTTCAGTGTGTGTTCATCAAGCTCCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CAA 72 bp GTAAACTTAATAAGTTTTGTGAAGACGCCTGGCGCATaGGGTTTAGCGCATGGGATAGAGCCCCATGATGTG +
Preference number: 6 (lower is better)
Translates to: VNLISFVKTPGA*GLAHGIEPHDV
Trigger: CACATCATGGGGCTCTATCCCATGCGCTAAACCCAATGCGCCAGGCGTCTTCACAAAACTTATTAAGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CCA 72 bp TTCTTCTTACATTTAAATCCTCCAATTATTCTAGACTaGACAGGAGGCGCAGCATCAATCCCTCCTAGGGAC +
Preference number: 6 (lower is better)
Translates to: FFLHLNPPIILD*TGGAASIPPRD
Trigger: GTCCCTAGGAGGGATTGATGCTGCGCCTCCTGTCCAGTCTAGAATAATTGGAGGATTTAAATGTAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CAA 90 bp CCCGCATATATATTTGTTGGAGCGGAGCACAGCCACATGCCAGGGTaGAGAATTCTTCTTACATTTAAATCCTCCAATTATTCTAGACTG +
Preference number: 6 (lower is better)
Translates to: PAYIFVGAEHSHMPG*RILLTFKSSNYSRL
Trigger: CAGTCTAGAATAATTGGAGGATTTAAATGTAAGAAGAATTCTCAACCCTGGCATGTGGCTGTGCTCCGCTCCAACAAATATATATGCGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7
CDS CAA 72 bp ATATTTGTTGGAGCGGAGCACAGCCACATGCCAGGGTaGAGAATTCTTCTTACATTTAAATCCTCCAATTAT +
Preference number: 6 (lower is better)
Translates to: IFVGAEHSHMPG*RILLTFKSSNY
Trigger: ATAATTGGAGGATTTAAATGTAAGAAGAATTCTCAACCCTGGCATGTGGCTGTGCTCCGCTCCAACAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079859.7