Pregenerated sensors for KLK13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054046Ensembl transcript IDs: ENSMUST00000066834.8, ENSMUST00000205457.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GAAGGAGGCCCTTTGGGTCCTGTAACTATATGGACCAGAGAACTGTaGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGTTGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: EGGPLGPVTIWTREL*AHVGGNLERSRVDE Trigger: CTCATCAACTCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCATATAGTTACAGGACCCAAAGGGCCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR TCA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGGGGAGAAGCACACAGTaGGAGAGGCACAGTAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALSRCGIIGKGMKSRTIEGRSTQ*ERHSRG Trigger: TCCCCTACTGTGCCTCTCTCACTGTGTGCTTCTCCC...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR CAA 90 bp | GGTGGTCATGATGAAGTAGGTGTTTGGATTGGAGCACTCAAGTTATaGGAGTGTTCCAAGGCTGGTGAAGGGAATGTCACTGTGAATATG | + |
|
Preference number: 2 (lower is better) Translates to: GGHDEVGVWIGALKL*ECSKAGEGNVTVNM Trigger: CATATTCACAGTGACATTCCCTTCACCAGCCTTGGAACACTCCAATAACTTGAGTGCTCCAATCCAAACACCTACTTCATCATGACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATAGGGTTGCAAGGACCTaGCAGGGAAGGTCCATCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LFKAGISIKQMWDHRQRYRVART*QGRSIY Trigger: ATAGATGGACCTTCCCTGGCAGGTCCTTGCAACCCT...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR CCA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGAAGATGAGATCAGGATaGGACTGTGTGGCACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: ALSRCGIIGKGMKSRTIEKMRSG*DCVAPT Trigger: TGTTGGTGCCACACAGTCCCATCCTGATCTCATCTT...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGACTTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGTGTTCCAAGGCTGGTaGAGGGAATGTCACTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: MTYSKQGLALSRCGIIGKVFQGW*RECHCE Trigger: TTCACAGTGACATTCCCTTCACCAGCCTTGGAACAC...TTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATAAGGGAATGTCACTGTaGATATGGGCCTGTTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFKAGISIKQMWDHRQRYKGMSL*IWACCS Trigger: GGAACAACAGGCCCATATTCACAGTGACATTCCCTT...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGACTTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAATGGCACCAACAGAATTaGAATATGCAGATATCAACG | + |
|
Preference number: 2 (lower is better) Translates to: MTYSKQGLALSRCGIIGKWHQQN*NMQIST Trigger: CGTTGATATCTGCATATTCCAATTCTGTTGGTGCCA...TTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAAGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR GCA 72 bp | TGCCAAGGGGTAAATAGTCTGAGGGTTGCAAGGACCTaGCAGGGAAGGTCCATCTATAGACTGCTACTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CQGVNSLRVART*QGRSIYRLLLR Trigger: TCTTAGTAGCAGTCTATAGATGGACCTTCCCTGGCAGGTCCTTGCAACCCTCAGACTATTTACCCCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR TCA 72 bp | TGGAGCACTCAAGTTATTGGAGTGTTCCAAGGCTGGTaGAGGGAATGTCACTGTGAATATGGGCCTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: WSTQVIGVFQGW*RECHCEYGPVV Trigger: AACAACAGGCCCATATTCACAGTGACATTCCCTTCACCAGCCTTGGAACACTCCAATAACTTGAGTGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR TCA 72 bp | TGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTaGGTAAGGATGTTCATGGGGGAGATAACAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: WDHRQRYEVKDY*VRMFMGEITGD Trigger: GTCTCCTGTTATCTCCCCCATGAACATCCTTACTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGTGGCACCAACAGAATaGGAATATGCAGATATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LFKAGISIKQMWDHRQRYVAPTE*EYADIN Trigger: GTTGATATCTGCATATTCCAATTCTGTTGGTGCCAC...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | ATATGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGCTGCCTGCCAAGGCTaGGAGTGGGGAAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IWTRELLAHVGGNLERSRAACQG*EWGRQV Trigger: CACCTGCCTTCCCCACTCTCAGCCTTGGCAGGCAGC...TCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | ATATGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGATCAGGTGGGTGGGGGTaGCCTGGTATTCAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: IWTRELLAHVGGNLERSRSGGWG*PGIQDG Trigger: CCCATCCTGAATACCAGGTCACCCCCACCCACCTGA...TCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | TGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGTTCCGGCACTCCTCATCTaGGCGCAGTTCAATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WTRELLAHVGGNLERSRVPALLI*AQFNVG Trigger: GCCAACATTGAACTGCGCTCAGATGAGGAGTGCCGG...AACTCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | TGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGTTAAACACGGCAGCAGGTaGCAGTGGGCAGGCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTRELLAHVGGNLERSRVKHGSR*QWAGSH Trigger: ATGACTGCCTGCCCACTGGCACCTGCTGCCGTGTTT...AACTCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGGATGGGACTGTGTGGCACCAACAGAATTGGAATATGCAGATATCAACGGCGGACCACCTCCATTaGCTGCTCACCGTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DQDGTVWHQQNWNMQISTADHLH*LLTVLH Trigger: GTGGAGAACGGTGAGCAGGCAATGGAGGTGGTCCGC...CGTTGATATCTGCATATTCCAATTCTGTTGGTGCCACACAGTCCCATCCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | TGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGTTATGATGTCATGGTCGTaGTTCAGGTGGGTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WTRELLAHVGGNLERSRVMMSWS*FRWVGV Trigger: CACCCCCACCCACCTGAACCACGACCATGACATCAT...AACTCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | ATATGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGGGCAGGCAGTCATCTaGAGAGAGTTTCAGGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: IWTRELLAHVGGNLERSRGQAVI*REFQGT Trigger: CGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCC...TCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGGGGGCTGGTGGTGGTaGCCCAGCCAGAAACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFKAGISIKQMWDHRQRYGGWWW*PSQKHG Trigger: GCCGTGTTTCTGGCTGGGGCACCACCACCAGCCCCC...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGCAGGTGTAGCCACCTaGGAGAAAACCACTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IWTRELLAHVGGNLERSRAGVAT*EKTTSP Trigger: GGGACTAGTGGTTTTCTCCCAGGTGGCTACACCTGC...TCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | GATCAGGATGGGACTGTGTGGCACCAACAGAATTGGAATATGCAGATATCAACGAGTACCCATTTGGGGTaGACCAGAACCCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DQDGTVWHQQNWNMQISTSTHLG*TRTPPQ Trigger: CTGTGGAGGGGTTCTGGTTCACCCCAAATGGGTACT...CGTTGATATCTGCATATTCCAATTCTGTTGGTGCCACACAGTCCCATCCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | GATCAGGATGGGACTGTGTGGCACCAACAGAATTGGAATATGCAGATATCAACGAGAGCATGTTGGCAGTaGTCTTCCCAGGGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: DQDGTVWHQQNWNMQISTRACWQ*SSQGTP Trigger: AGGTGTACCCTGGGAAGATCACTGCCAACATGCTCT...CGTTGATATCTGCATATTCCAATTCTGTTGGTGCCACACAGTCCCATCCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGTGGTCGTGGTTCAGGTaGGTGGGGGTGACCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCGIIGKGMKSRTIEWSWFR*VGVTWY Trigger: ATACCAGGTCACCCCCACCCACCTGAACCACGACCA...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGTTCAGGGTACGGACGTaGCTGCTGAGCTGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCGIIGKGMKSRTIEFRVRT*LLSWTG Trigger: TCCAGTCCAGCTCAGCAGCCACGTCCGTACCCTGAA...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR CAA 72 bp | CCTTTGGGTCCTGTAACTATATGGACCAGAGAACTGTaGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLGPVTIWTREL*AHVGGNLERSR Trigger: TCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCATATAGTTACAGGACCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | GATCAGGATGGGACTGTGTGGCACCAACAGAATTGGAATATGCAGATATCAACGAATCTCCCCATGAGATaGTGCCGTAGAGTTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DQDGTVWHQQNWNMQISTNLPMR*CRRVCH Trigger: ATGGCAAACTCTACGGCATCATCTCATGGGGAGATT...CGTTGATATCTGCATATTCCAATTCTGTTGGTGCCACACAGTCCCATCCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGCCCCAGGGCATGCTTaGCCAGATGAACTGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LFKAGISIKQMWDHRQRYAPGHA*PDELCT Trigger: GGTACACAGTTCATCTGGGCAAGCATGCCCTGGGGC...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATACCACCTCCATTGCCTaGTCACCGTTCTCCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LFKAGISIKQMWDHRQRYTTSIA*SPFSTR Trigger: GCGTGTGGAGAACGGTGAGCAGGCAATGGAGGTGGT...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGGATGGGACTGTGTGGCACCAACAGAATTGGAATATGCAGATATCAACGCCCTTTGTCCATCTCTaGTCTGGAGTGTTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DQDGTVWHQQNWNMQISTPFVHL*SGVFLM Trigger: CATCAGAAACACTCCAGAGCAGAGATGGACAAAGGG...CGTTGATATCTGCATATTCCAATTCTGTTGGTGCCACACAGTCCCATCCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGAGAAGCATGATGTCATaGTCGTGGTTCAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCGIIGKGMKSRTIERSMMS*SWFRWV Trigger: CACCCACCTGAACCACGACCATGACATCATGCTTCT...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | ATGACTTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGCTGCTGAGCTGGACTaGAGACTTCAGCTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTYSKQGLALSRCGIIGKAAELD*RLQLQK Trigger: CTTCTGGAGCTGAAGTCTCCAGTCCAGCTCAGCAGC...TTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATCGCACTGCAGGGTTTTaGGATAATTCACCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFKAGISIKQMWDHRQRYRTAGF*DNSPGG Trigger: GCCCCCAGGTGAATTATCCCAAAACCCTGCAGTGCG...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGAAACGCCAGGTCGGTTaGGCTGTCCACATGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSRCGIIGKGMKSRTIEKRQVG*AVHMEN Trigger: ATTTTCCATGTGGACAGCCCAACCGACCTGGCGTTT...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR CAA 72 bp | GATGAAGTAGGTGTTTGGATTGGAGCACTCAAGTTATaGGAGTGTTCCAAGGCTGGTGAAGGGAATGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: DEVGVWIGALKL*ECSKAGEGNVT Trigger: AGTGACATTCCCTTCACCAGCCTTGGAACACTCCAATAACTTGAGTGCTCCAATCCAAACACCTACTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| 3UTR CAA 72 bp | ATGAGATCAGGATGGGACTGTGTGGCACCAACAGAATaGGAATATGCAGATATCAACGCCAGTTTATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRSGWDCVAPTE*EYADINASLWW Trigger: CCACCATAAACTGGCGTTGATATCTGCATATTCCAATTCTGTTGGTGCCACACAGTCCCATCCTGATCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATCGTAGAGTTTGCCATTaGAAATCAGTGGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKAGISIKQMWDHRQRYRRVCH*KSVGPQ Trigger: CTGGGGGCCCACTGATTTGCAATGGCAAACTCTACG...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR TCA 90 bp | TTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAAGGTATTCAGCTCCAGAAGCATaGTGTCATGGTCGTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFKAGISIKQMWDHRQRYSAPEA*CHGRGS Trigger: TGAACCACGACCATGACATCATGCTTCTGGAGCTGA...ATACCTTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CCA 90 bp | ATGACTTATTCAAAGCAGGGATTAGCATTAAGCAGATGTGGGATCATAGGCAAACCTTTCCCCCTTCTTTaGTACCAGCACAGAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: MTYSKQGLALSRCGIIGKPFPLL*YQHRAC Trigger: ACATGCTCTGTGCTGGTACCAAAGAAGGGGGAAAGG...TTTGCCTATGATCCCACATCTGCTTAATGCTAATCCCTGCTTTGAATAAGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS CCA 90 bp | GGCTGGTGGTGGTGCCCCAGCCAGAAACACGGCAGCAGGTGCCAGTaGGCAGGCAGTCATCTGCAGAGAGTTTCAGGGTACGGACGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWWWCPSQKHGSRCQ*AGSHLQRVSGYGRG Trigger: GCCACGTCCGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCCACTGGCACCTGCTGCCGTGTTTCTGGCTGGGGCACCACCACCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS GCA 90 bp | GGTGACCTGGTATTCAGGATGGGGGATAGAGCGGACCACCTCCATTaGCTGCTCACCGTTCTCCACACGCCCCAGGGCATGCTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDLVFRMGDRADHLH*LLTVLHTPQGMLAQ Trigger: CTGGGCAAGCATGCCCTGGGGCGTGTGGAGAACGGTGAGCAGGCAATGGAGGTGGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS GCA 90 bp | CCAGCCAGAAACACGGCAGCAGGTGCCAGTGGGCAGGCAGTCATCTaGAGAGAGTTTCAGGGTACGGACGTGGCTGCTGAGCTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PARNTAAGASGQAVI*REFQGTDVAAELDW Trigger: CCAGTCCAGCTCAGCAGCCACGTCCGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCCACTGGCACCTGCTGCCGTGTTTCTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS GCA 90 bp | CCTCCATTGCCTGCTCACCGTTCTCCACACGCCCCAGGGCATGCTTaGCCAGATGAACTGTGTACCCATCTTTCCTGCAGTGAGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLPAHRSPHAPGHA*PDELCTHLSCSEPL Trigger: CAGCGGCTCACTGCAGGAAAGATGGGTACACAGTTCATCTGGGCAAGCATGCCCTGGGGCGTGTGGAGAACGGTGAGCAGGCAATGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS CCA 90 bp | TCATGGTCGTGGTTCAGGTGGGTGGGGGTGACCTGGTATTCAGGATaGGGGATAGAGCGGACCACCTCCATTGCCTGCTCACCGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWSWFRWVGVTWYSG*GIERTTSIACSPFS Trigger: GGAGAACGGTGAGCAGGCAATGGAGGTGGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS CCA 90 bp | CAGGGTACACCTGCCGGCACTCCTCATCTGAGCGCAGTTCAATGTTaGCGCACTGCAGGGTTTTGGGATAATTCACCTGGGGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGTPAGTPHLSAVQC*RTAGFWDNSPGGWW Trigger: CCACCAGCCCCCAGGTGAATTATCCCAAAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAGATGAGGAGTGCCGGCAGGTGTACCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS GCA 90 bp | GTACCAGCACAGAGCATGTTGGCAGTGATCTTCCCAGGGTACACCTaGCGGCACTCCTCATCTGAGCGCAGTTCAATGTTGGCGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPAQSMLAVIFPGYT*RHSSSERSSMLAHC Trigger: GCAGTGCGCCAACATTGAACTGCGCTCAGATGAGGAGTGCCGGCAGGTGTACCCTGGGAAGATCACTGCCAACATGCTCTGTGCTGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 90 bp | AGAAGCATGATGTCATGGTCGTGGTTCAGGTGGGTGGGGGTGACCTaGTATTCAGGATGGGGGATAGAGCGGACCACCTCCATTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSMMSWSWFRWVGVT*YSGWGIERTTSIAC Trigger: GCAGGCAATGGAGGTGGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGACATCATGCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS CCA 90 bp | GGAGACTTCAGCTCCAGAAGCATGATGTCATGGTCGTGGTTCAGGTaGGTGGGGGTGACCTGGTATTCAGGATGGGGGATAGAGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GDFSSRSMMSWSWFR*VGVTWYSGWGIERT Trigger: GGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGACATCATGCTTCTGGAGCTGAAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 90 bp | CCAGTGGGCAGGCAGTCATCTGCAGAGAGTTTCAGGGTACGGACGTaGCTGCTGAGCTGGACTGGAGACTTCAGCTCCAGAAGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PVGRQSSAESFRVRT*LLSWTGDFSSRSMM Trigger: CATCATGCTTCTGGAGCTGAAGTCTCCAGTCCAGCTCAGCAGCCACGTCCGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 90 bp | AGCTGGACTGGAGACTTCAGCTCCAGAAGCATGATGTCATGGTCGTaGTTCAGGTGGGTGGGGGTGACCTGGTATTCAGGATGGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SWTGDFSSRSMMSWS*FRWVGVTWYSGWGI Trigger: TATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGACATCATGCTTCTGGAGCTGAAGTCTCCAGTCCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 90 bp | CAGTCATCTGCAGAGAGTTTCAGGGTACGGACGTGGCTGCTGAGCTaGACTGGAGACTTCAGCTCCAGAAGCATGATGTCATGGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSAESFRVRTWLLS*TGDFSSRSMMSWSW Trigger: CCACGACCATGACATCATGCTTCTGGAGCTGAAGTCTCCAGTCCAGCTCAGCAGCCACGTCCGTACCCTGAAACTCTCTGCAGATGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS TCA 90 bp | GTTGGCAGTGATCTTCCCAGGGTACACCTGCCGGCACTCCTCATCTaGGCGCAGTTCAATGTTGGCGCACTGCAGGGTTTTGGGATAATT | + |
|
Preference number: 5 (lower is better) Translates to: VGSDLPRVHLPALLI*AQFNVGALQGFGII Trigger: AATTATCCCAAAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAGATGAGGAGTGCCGGCAGGTGTACCCTGGGAAGATCACTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 90 bp | ATCTGCAGAGAGTTTCAGGGTACGGACGTGGCTGCTGAGCTGGACTaGAGACTTCAGCTCCAGAAGCATGATGTCATGGTCGTGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICREFQGTDVAAELD*RLQLQKHDVMVVVQ Trigger: CTGAACCACGACCATGACATCATGCTTCTGGAGCTGAAGTCTCCAGTCCAGCTCAGCAGCCACGTCCGTACCCTGAAACTCTCTGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS-3UTR CAA 90 bp | TGGACCAGAGAACTGTTGGCCCATGTTGGTGGTAACTTAGAGAGGAGCAGAGTTTCCTTTCCCCCTTCTTaGGTACCAGCACAGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: WTRELLAHVGGNLERSRVSFPPS*VPAQSM Trigger: CATGCTCTGTGCTGGTACCAAAGAAGGGGGAAAGGA...AACTCTGCTCCTCTCTAAGTTACCACCAACATGGGCCAACAGTTCTCTGGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAAGCAGATGTGGGATCATAGGCAAAGGTATGAAGTCAAGGACTATTGAGCCAGCACAGAGCATGTaGGCAGTGATCTTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSRCGIIGKGMKSRTIEPAQSM*AVIFPG Trigger: CCCTGGGAAGATCACTGCCAACATGCTCTGTGCTGG...CTCAATAGTCCTTGACTTCATACCTTTGCCTATGATCCCACATCTGCTTAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS GCA 72 bp | GTATTCAGGATGGGGGATAGAGCGGACCACCTCCATTaGCTGCTCACCGTTCTCCACACGCCCCAGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: VFRMGDRADHLH*LLTVLHTPQGM Trigger: CATGCCCTGGGGCGTGTGGAGAACGGTGAGCAGGCAATGGAGGTGGTCCGCTCTATCCCCCATCCTGAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS GCA 72 bp | AACACGGCAGCAGGTGCCAGTGGGCAGGCAGTCATCTaGAGAGAGTTTCAGGGTACGGACGTGGCTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NTAAGASGQAVI*REFQGTDVAAE Trigger: CTCAGCAGCCACGTCCGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCCACTGGCACCTGCTGCCGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 72 bp | TGGTTCAGGTGGGTGGGGGTGACCTGGTATTCAGGATaGGGGATAGAGCGGACCACCTCCATTGCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WFRWVGVTWYSG*GIERTTSIACS Trigger: TGAGCAGGCAATGGAGGTGGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS CCA 72 bp | ATGTCATGGTCGTGGTTCAGGTGGGTGGGGGTGACCTaGTATTCAGGATGGGGGATAGAGCGGACCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MSWSWFRWVGVT*YSGWGIERTTS Trigger: GGAGGTGGTCCGCTCTATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 72 bp | CTGAGCGCAGTTCAATGTTGGCGCACTGCAGGGTTTTaGGATAATTCACCTGGGGGCTGGTGGTGGTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSAVQCWRTAGF*DNSPGGWWWCP Trigger: GGGGCACCACCACCAGCCCCCAGGTGAATTATCCCAAAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS GCA 72 bp | CCTGCTCACCGTTCTCCACACGCCCCAGGGCATGCTTaGCCAGATGAACTGTGTACCCATCTTTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAHRSPHAPGHA*PDELCTHLSCS Trigger: ACTGCAGGAAAGATGGGTACACAGTTCATCTGGGCAAGCATGCCCTGGGGCGTGTGGAGAACGGTGAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS TCA 72 bp | GATCTTCCCAGGGTACACCTGCCGGCACTCCTCATCTaGGCGCAGTTCAATGTTGGCGCACTGCAGGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLPRVHLPALLI*AQFNVGALQGF Trigger: AAAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAGATGAGGAGTGCCGGCAGGTGTACCCTGGGAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS TCA 72 bp | CCCCTTCTTTGGTACCAGCACAGAGCATGTTGGCAGTaGTCTTCCCAGGGTACACCTGCCGGCACTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLWYQHRACWQ*SSQGTPAGTPH Trigger: ATGAGGAGTGCCGGCAGGTGTACCCTGGGAAGATCACTGCCAACATGCTCTGTGCTGGTACCAAAGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||
| CDS GCA 72 bp | CAGAGCATGTTGGCAGTGATCTTCCCAGGGTACACCTaGCGGCACTCCTCATCTGAGCGCAGTTCAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSMLAVIFPGYT*RHSSSERSSML Trigger: CAACATTGAACTGCGCTCAGATGAGGAGTGCCGGCAGGTGTACCCTGGGAAGATCACTGCCAACATGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 72 bp | AGCTCCAGAAGCATGATGTCATGGTCGTGGTTCAGGTaGGTGGGGGTGACCTGGTATTCAGGATGGGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: SSRSMMSWSWFR*VGVTWYSGWGI Trigger: TATCCCCCATCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGACATCATGCTTCTGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 72 bp | GGAGACTTCAGCTCCAGAAGCATGATGTCATGGTCGTaGTTCAGGTGGGTGGGGGTGACCTGGTATTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GDFSSRSMMSWS*FRWVGVTWYSG Trigger: TCCTGAATACCAGGTCACCCCCACCCACCTGAACCACGACCATGACATCATGCTTCTGGAGCTGAAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS CCA 72 bp | GCAGAGAGTTTCAGGGTACGGACGTGGCTGCTGAGCTaGACTGGAGACTTCAGCTCCAGAAGCATGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AESFRVRTWLLS*TGDFSSRSMMS Trigger: TGACATCATGCTTCTGGAGCTGAAGTCTCCAGTCCAGCTCAGCAGCCACGTCCGTACCCTGAAACTCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066834.8 ENSMUST00000205457.2 |
||
| CDS TCA 72 bp | GGTTGGGCTGTCCACATGGAAAATCTCCCCATGAGATaGTGCCGTAGAGTTTGCCATTGCAAATCAGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GWAVHMENLPMR*CRRVCHCKSVG Trigger: GCCCACTGATTTGCAATGGCAAACTCTACGGCATCATCTCATGGGGAGATTTTCCATGTGGACAGCCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066834.8 |
||