Pregenerated sensors for KLK11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067616Ensembl transcript IDs: ENSMUST00000080211.12, ENSMUST00000171458.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGCATTAAGAAGAGGTTaGAGGGGTTGGGTGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSERVHARVPAEDFLGQNALRRG*RGWVVG Trigger: TCCCACCACCCAACCCCTCCAACCTCTTCTTAATGC...ATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGGCATTAAGAAGAGGTTaGAGGGGTTGGGTGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RVHARVPAEDFLGQNEEKALRRG*RGWVVG Trigger: TCCCACCACCCAACCCCTCCAACCTCTTCTTAATGC...CTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATCTTCTTAGGGCAGAATaGAGAGAAGTCAAAGCATTA | + |
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Preference number: 2 (lower is better) Translates to: SQDLIPGPRSIIKLEHPYLLRAE*REVKAL Trigger: TAATGCTTTGACTTCTCTTCATTCTGCCCTAAGAAG...ATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATATTTATTGAAACCCTGGGATATGCCAGGGACTGTCTTCAAAGCTGGGAAAAACAAAACCAGTGGTaGTCATGTCCAGAGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: QIFIETLGYARDCLQSWEKQNQW*SCPESQ Trigger: TTGTGACTCTGGACATGATCACCACTGGTTTTGTTT...TTCCCAGCTTTGAAGACAGTCCCTGGCATATCCCAGGGTTTCAATAAATATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR-3UTR CAA 90 bp | CATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGTCAAAGAAGAGGTTGGAGGGGTaGGGTGGTGGGAAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: HARVPAEDFLGQNEEKSKKRLEG*GGGKQV Trigger: GACCTGCTTCCCACCACCCAACCCCTCCAACCTCTT...CTTTGACTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGAAGAGGTTGGAGGGGTaGGGTGGTGGGAAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RVHARVPAEDFLGQNEEKKRLEG*GGGKQV Trigger: GACCTGCTTCCCACCACCCAACCCCTCCAACCTCTT...CTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACAGCATTAAGAAGAGGTaGGAGGGGTTGGGTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SGFDSRPQVDHQVRASLYSIKKR*EGLGGG Trigger: CCCACCACCCAACCCCTCCAACCTCTTCTTAATGCT...GTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | GGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATAGTGTGGGGACAGGGTaGGTGGCTGCACAGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GSERVHARVPAEDFLGQNSVGTG*VAAQLG Trigger: CCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACT...ATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | GGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGGGGGAAGGACTCAGTaGCCATCCGCCTCTGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GSERVHARVPAEDFLGQNGGRTQ*PSASAH Trigger: GTGAGCAGAGGCGGATGGCCACTGAGTCCTTCCCCC...ATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | GGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATTGCAGCGACACAGTGTaGGGACAGGGTGAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSERVHARVPAEDFLGQNCSDTV*GQGEWL Trigger: CAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCA...ATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | ACTCATGGTGGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAACGGCACATGGGTCCTaGCCCCAGGAGATGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: THGGSERVHARVPAEDFLTAHGS*PQEMMP Trigger: AGGCATCATCTCCTGGGGTCAGGACCCATGTGCCGT...TAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCCACCATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | ACTCATGGTGGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTACTTGCGGCAGTGGGCTaGTGTCAGGAGCCATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: THGGSERVHARVPAEDFLLAAVG*CQEPFG Trigger: CCCAAATGGCTCCTGACAGCAGCCCACTGCCGCAAG...TAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCCACCATGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | AGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGGGGGGCGATGAGGGTTaGCCCACAGAGAAGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RVHARVPAEDFLGQNEEKGGDEG*PTEKPC Trigger: ACACGGCTTCTCTGTGGGGCAACCCTCATCGCCCCC...CTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | GTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGTCAGAGGCAGCTGGTGCCTaGAGCGACACAGTGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VHARVPAEDFLGQNEEKSEAAGA*SDTVWG Trigger: TCCCCACACTGTGTCGCTGCAGGCACCAGCTGCCTC...TGACTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCACAATTTAGTTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCGGCGCAACTGGGGGCTaGACGTGGTGCCCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: PESQFSSSQDLIPGPRSIGATGG*TWCPIQ Trigger: CTGGATGGGGCACCACGTCCAGCCCCCAGTTGCGCC...GATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAACTAAATTGTGACTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATGGCGCAACTGGGGGCTaGACGTGGTGCCCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQDLIPGPRSIIKLEHPYGATGG*TWCPIQ Trigger: CTGGATGGGGCACCACGTCCAGCCCCCAGTTGCGCC...ATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | ACTCATGGTGGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTACCTGACCCCAGGAGATaGTGCCTTGAAGAGATCCGT | + |
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Preference number: 4 (lower is better) Translates to: THGGSERVHARVPAEDFLPDPRR*CLEEIR Trigger: ACGGATCTCTTCAAGGCATCATCTCCTGGGGTCAGG...TAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCCACCATGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | AGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGCACCTGCCATGGCTGTaGGTGAGGCCTGCACTCATA | + |
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Preference number: 4 (lower is better) Translates to: RVHARVPAEDFLGQNEEKHLPWL*VRPALI Trigger: TATGAGTGCAGGCCTCACTCACAGCCATGGCAGGTG...CTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | CATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGTCAAAGCACCTGCCATGGCTGTaGGTGAGGCCTGCACTCATA | + |
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Preference number: 4 (lower is better) Translates to: HARVPAEDFLGQNEEKSKHLPWL*VRPALI Trigger: TATGAGTGCAGGCCTCACTCACAGCCATGGCAGGTG...CTTTGACTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | TCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACGGGGGCGATGAGGGTTaGCCCACAGAGAAGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGFDSRPQVDHQVRASLYGGDEG*PTEKPC Trigger: ACACGGCTTCTCTGTGGGGCAACCCTCATCGCCCCC...GTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | TCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACAGAATCATCCTGGCCTaGAGTAGGGCAGGGCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SGFDSRPQVDHQVRASLYRIILA*SRAGRA Trigger: CGCCCGCCCTGCCCTACTCCAGGCCAGGATGATTCT...GTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080211.12 |
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| CDS-3UTR TCA 90 bp | CCAGAGTCACAATTTAGTTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCTGCCCCATCCAGAAATaGGGCAGCTGGTGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PESQFSSSQDLIPGPRSICPIQK*GSWCLQ Trigger: CTGCAGGCACCAGCTGCCTCATTTCTGGATGGGGCA...GATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAACTAAATTGTGACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | TTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCACGGCACATGGGTCCTaGCCCCAGGAGATGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: FKSGFDSRPQVDHQVRASTAHGS*PQEMMP Trigger: AGGCATCATCTCCTGGGGTCAGGACCCATGTGCCGT...GGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGTCACAATTTAGTTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCCTTGCGGCAGTGGGCTaGTGTCAGGAGCCATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PESQFSSSQDLIPGPRSILAAVG*CQEPFG Trigger: CCCAAATGGCTCCTGACAGCAGCCCACTGCCGCAAG...GATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAACTAAATTGTGACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCGTCGGAGAATCATCCTaGCCTGGAGTAGGGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FKSGFDSRPQVDHQVRASVGESS*PGVGQG Trigger: GCCCTGCCCTACTCCAGGCCAGGATGATTCTCCGAC...GGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080211.12 |
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| CDS-3UTR CCA 90 bp | TTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACTATACTCGGGGGAAGGACTCAGTaGCCATCCGCCTCTGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LIPGPRSIIKLEHPYTILGGRTQ*PSASAH Trigger: GTGAGCAGAGGCGGATGGCCACTGAGTCCTTCCCCC...GAGTATAGTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | TCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACACAGCATGGTGTCTGTaGTGTTGCCCGGGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGFDSRPQVDHQVRASLYTAWCL*CCPGRP Trigger: AGGCCTACCCGGGCAACATCACAGACACCATGCTGT...GTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGTCACAATTTAGTTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCACAGCATGGTGTCTGTaGTGTTGCCCGGGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PESQFSSSQDLIPGPRSITAWCL*CCPGRP Trigger: AGGCCTACCCGGGCAACATCACAGACACCATGCTGT...GATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAACTAAATTGTGACTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | TTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTTGAAGAGATCCGTTaGAGACCAGGGGGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FKSGFDSRPQVDHQVRASLEEIR*RPGGLQ Trigger: CTGGAGGCCCCCTGGTCTGCAACGGATCTCTTCAAG...GGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | TTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACTATACTCTGCAGCGACACAGTGTaGGGACAGGGTGAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LIPGPRSIIKLEHPYTILCSDTV*GQGEWL Trigger: CAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCA...GAGTATAGTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | TTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACTATACTCTCACGTAATGGGGCTTaGGGCAGTGGGCTGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LIPGPRSIIKLEHPYTILSRNGA*GSGLLS Trigger: TGACAGCAGCCCACTGCCGCAAGCCCCATTACGTGA...GAGTATAGTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | AAATATTTATTGAAACCCTGGGATATGCCAGGGACTGTCTTCAAAGCTGGGAACGAGGCAGCTGGTGCCTaGAGCGACACAGTGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KYLLKPWDMPGTVFKAGNEAAGA*SDTVWG Trigger: TCCCCACACTGTGTCGCTGCAGGCACCAGCTGCCTC...GTTCCCAGCTTTGAAGACAGTCCCTGGCATATCCCAGGGTTTCAATAAATATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATCCAGAGCAAGTGCAATaGGTCGGAGAATCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQDLIPGPRSIIKLEHPYPEQVQ*VGESSW Trigger: CCAGGATGATTCTCCGACTCATTGCACTTGCTCTGG...ATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080211.12 |
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| CDS-3UTR GCA 90 bp | AGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGGTCTTCTCTAGATTGTaGTCTCCAAGGAGGATCACG | + |
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Preference number: 4 (lower is better) Translates to: RVHARVPAEDFLGQNEEKVFSRL*SPRRIT Trigger: CGTGATCCTCCTTGGAGAGCACAATCTAGAGAAGAC...CTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | CAAATATTTATTGAAACCCTGGGATATGCCAGGGACTGTCTTCAAAGCTGGGAACTTGAAGAGATCCGTTaGAGACCAGGGGGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QIFIETLGYARDCLQSWELEEIR*RPGGLQ Trigger: CTGGAGGCCCCCTGGTCTGCAACGGATCTCTTCAAG...TTCCCAGCTTTGAAGACAGTCCCTGGCATATCCCAGGGTTTCAATAAATATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CCA 90 bp | AAATATTTATTGAAACCCTGGGATATGCCAGGGACTGTCTTCAAAGCTGGGAACTGGGGACAGGGTGAGTaGCTGCACAGCTCGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: KYLLKPWDMPGTVFKAGNWGQGE*LHSSGK Trigger: TTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCA...GTTCCCAGCTTTGAAGACAGTCCCTGGCATATCCCAGGGTTTCAATAAATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR TCA 90 bp | CAAATATTTATTGAAACCCTGGGATATGCCAGGGACTGTCTTCAAAGCTGGGAACCTGACCCCAGGAGATaGTGCCTTGAAGAGATCCGT | + |
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Preference number: 4 (lower is better) Translates to: QIFIETLGYARDCLQSWEPDPRR*CLEEIR Trigger: ACGGATCTCTTCAAGGCATCATCTCCTGGGGTCAGG...TTCCCAGCTTTGAAGACAGTCCCTGGCATATCCCAGGGTTTCAATAAATATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR GCA 90 bp | TTCAAGTCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCGTCTTCTCTAGATTGTaGTCTCCAAGGAGGATCACG | + |
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Preference number: 4 (lower is better) Translates to: FKSGFDSRPQVDHQVRASVFSRL*SPRRIT Trigger: CGTGATCCTCCTTGGAGAGCACAATCTAGAGAAGAC...GGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| 3UTR CAA 72 bp | TCATGTCCAGAGTCACAATTTAGTTCAAGTCAGGATTaGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SCPESQFSSSQD*IPGPRSIIKLE Trigger: CTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGACTTGAACTAAATTGTGACTCTGGACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS CCA 90 bp | GCCCCATCCAGAAATGAGGCAGCTGGTGCCTGCAGCGACACAGTGTaGGGACAGGGTGAGTGGCTGCACAGCTCGGGTAAAGAAGACGGG | + |
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Preference number: 5 (lower is better) Translates to: APSRNEAAGACSDTV*GQGEWLHSSGKEDG Trigger: CCCGTCTTCTTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCAGGCACCAGCTGCCTCATTTCTGGATGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS CCA 90 bp | GAGGCAGCTGGTGCCTGCAGCGACACAGTGTGGGGACAGGGTGAGTaGCTGCACAGCTCGGGTAAAGAAGACGGGAGACGACATCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: EAAGACSDTVWGQGE*LHSSGKEDGRRHLH Trigger: GTGAAGATGTCGTCTCCCGTCTTCTTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCAGGCACCAGCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS GCA 90 bp | CAGCTGGTGCCTGCAGCGACACAGTGTGGGGACAGGGTGAGTGGCTaGACAGCTCGGGTAAAGAAGACGGGAGACGACATCTTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: QLVPAATQCGDRVSG*TARVKKTGDDIFTS Trigger: GCTTGTGAAGATGTCGTCTCCCGTCTTCTTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCAGGCACCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS GCA 90 bp | TTGTTGAAGTCGGGGTGGGGGAAGGACTCAGTGGCCATCCGCCTCTaGTCACAGCCGTCTGTCTTCTCTAGATTGTGCTCTCCAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLKSGWGKDSVAIRL*SQPSVFSRLCSPRR Trigger: CCTCCTTGGAGAGCACAATCTAGAGAAGACAGACGGCTGTGAGCAGAGGCGGATGGCCACTGAGTCCTTCCCCCACCCCGACTTCAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS TCA 90 bp | ACAGAGAAGCCGTGTCTTCTGAAAGAGGGCCACCTGCCATGGCTGTaGGTGAGGCCTGCACTCATAACCCTTGATGATCCTCGTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TEKPCLLKEGHLPWL*VRPALITLDDPRLS Trigger: GGAGAGACGAGGATCATCAAGGGTTATGAGTGCAGGCCTCACTCACAGCCATGGCAGGTGGCCCTCTTTCAGAAGACACGGCTTCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | CATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGTCAAAGTTGTTGGGGAGGCTGTaGTTGAAGTCGGGGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: HARVPAEDFLGQNEEKSKLLGRL*LKSGWG Trigger: CCCCCACCCCGACTTCAACAACAGCCTCCCCAACAA...CTTTGACTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | GTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGTCATTGTTGGGGAGGCTGTaGTTGAAGTCGGGGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: VHARVPAEDFLGQNEEKSLLGRL*LKSGWG Trigger: CCCCCACCCCGACTTCAACAACAGCCTCCCCAACAA...TGACTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | GGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATCCAGGAGATGATGCCTaGAAGAGATCCGTTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: GSERVHARVPAEDFLGQNPGDDA*KRSVAD Trigger: GTCTGCAACGGATCTCTTCAAGGCATCATCTCCTGG...ATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | ACTCATGGTGGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTATTCCGGTGGTCTTTGTaGGGGAGGCTGTTGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: THGGSERVHARVPAEDFLFRWSL*GRLLLK Trigger: CTTCAACAACAGCCTCCCCAACAAAGACCACCGGAA...TAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCCACCATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | ACTCATGGTGGGTCGGAGAGAGTACATGCCAGGGTCCCAGCTGAGGACTTCTTATCTGTCTTCTCTAGATaGTGCTCTCCAAGGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: THGGSERVHARVPAEDFLSVFSR*CSPRRI Trigger: GATCCTCCTTGGAGAGCACAATCTAGAGAAGACAGA...TAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCCGACCCACCATGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | CATGCCAGGGTCCCAGCTGAGGACTTCTTAGGGCAGAATGAAGAGAAGTCAAAGTCATTCCGGTGGTCTTaGTTGGGGAGGCTGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HARVPAEDFLGQNEEKSKSFRWS*LGRLLL Trigger: CAACAACAGCCTCCCCAACAAAGACCACCGGAATGA...CTTTGACTTCTCTTCATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | TCAGGATTTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACCCAGGAGATGATGCCTaGAAGAGATCCGTTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SGFDSRPQVDHQVRASLYPGDDA*KRSVAD Trigger: GTCTGCAACGGATCTCTTCAAGGCATCATCTCCTGG...GTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAAATCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | TTGATTCCAGGCCCCAGGTCGATCATCAAGTTAGAGCATCCCTATACTATACTCTCTGTCTTCTCTAGATaGTGCTCTCCAAGGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: LIPGPRSIIKLEHPYTILSVFSR*CSPRRI Trigger: GATCCTCCTTGGAGAGCACAATCTAGAGAAGACAGA...GAGTATAGTATAGGGATGCTCTAACTTGATGATCGACCTGGGGCCTGGAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS-3UTR CAA 90 bp | AAATATTTATTGAAACCCTGGGATATGCCAGGGACTGTCTTCAAAGCTGGGAACTCATTCCGGTGGTCTTaGTTGGGGAGGCTGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: KYLLKPWDMPGTVFKAGNSFRWS*LGRLLL Trigger: CAACAACAGCCTCCCCAACAAAGACCACCGGAATGA...GTTCCCAGCTTTGAAGACAGTCCCTGGCATATCCCAGGGTTTCAATAAATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS CCA 72 bp | GGTGCCTGCAGCGACACAGTGTGGGGACAGGGTGAGTaGCTGCACAGCTCGGGTAAAGAAGACGGGAGACGA | + |
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Preference number: 6 (lower is better) Translates to: GACSDTVWGQGE*LHSSGKEDGRR Trigger: TCGTCTCCCGTCTTCTTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCAGGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS GCA 72 bp | AAGGAGGATCACGTAATGGGGCTTGCGGCAGTGGGCTaGTGTCAGGAGCCATTTGGGGGCGATGAGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: KEDHVMGLAAVG*CQEPFGGDEGC Trigger: GCAACCCTCATCGCCCCCAAATGGCTCCTGACAGCAGCCCACTGCCGCAAGCCCCATTACGTGATCCTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS GCA 72 bp | CCTGCAGCGACACAGTGTGGGGACAGGGTGAGTGGCTaGACAGCTCGGGTAAAGAAGACGGGAGACGACATC | + |
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Preference number: 6 (lower is better) Translates to: PAATQCGDRVSG*TARVKKTGDDI Trigger: GATGTCGTCTCCCGTCTTCTTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS TCA 72 bp | TGTTCGATGATGGAGACATTGGCACATCGCAAGGAATaGGGCAGGCGCAACTGGGGGCTGGACGTGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: CSMMETLAHRKE*GRRNWGLDVVP Trigger: GGGCACCACGTCCAGCCCCCAGTTGCGCCTGCCTCATTCCTTGCGATGTGCCAATGTCTCCATCATCGAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS CCA 72 bp | AGAAATGAGGCAGCTGGTGCCTGCAGCGACACAGTGTaGGGACAGGGTGAGTGGCTGCACAGCTCGGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: RNEAAGACSDTV*GQGEWLHSSGK Trigger: TTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTGCAGGCACCAGCTGCCTCATTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS TCA 72 bp | CTCCCCCTACGTGCCCTGTTACCAGAGCAAGTGCAATaGGTCGGAGAATCATCCTGGCCTGGAGTAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPLRALLPEQVQ*VGESSWPGVGQ Trigger: CTGCCCTACTCCAGGCCAGGATGATTCTCCGACTCATTGCACTTGCTCTGGTAACAGGGCACGTAGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080211.12 |
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| CDS TCA 72 bp | CCTCTTTCCGAACACTGGCGCACAGCATGGTGTCTGTaGTGTTGCCCGGGTAGGCCTTCTCACACTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLSEHWRTAWCL*CCPGRPSHTPC Trigger: ACAAGGAGTGTGAGAAGGCCTACCCGGGCAACATCACAGACACCATGCTGTGCGCCAGTGTTCGGAAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS TCA 72 bp | CCGTGTCTTCTGAAAGAGGGCCACCTGCCATGGCTGTaGGTGAGGCCTGCACTCATAACCCTTGATGATCCT | + |
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Preference number: 6 (lower is better) Translates to: PCLLKEGHLPWL*VRPALITLDDP Trigger: AGGATCATCAAGGGTTATGAGTGCAGGCCTCACTCACAGCCATGGCAGGTGGCCCTCTTTCAGAAGACACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS TCA 72 bp | TGCCCGGGTAGGCCTTCTCACACTCCTTGTGTTCGATaGTGGAGACATTGGCACATCGCAAGGAATGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: CPGRPSHTPCVR*WRHWHIARNEA Trigger: TGCCTCATTCCTTGCGATGTGCCAATGTCTCCATCATCGAACACAAGGAGTGTGAGAAGGCCTACCCGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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| CDS CAA 72 bp | GACATCTTCACAAGCATTATGTCATTCCGGTGGTCTTaGTTGGGGAGGCTGTTGTTGAAGTCGGGGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: DIFTSIMSFRWS*LGRLLLKSGWG Trigger: CCCCCACCCCGACTTCAACAACAGCCTCCCCAACAAAGACCACCGGAATGACATAATGCTTGTGAAGATGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080211.12 ENSMUST00000171458.2 |
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