Pregenerated sensors for KLK10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030693Ensembl transcript IDs: ENSMUST00000014058.11
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTaGACAAGGGATGAAGGAAGAGGGGTGGGTGGGCATGAGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LSQPPFSAFVSREQE*TRDEGRGVGGHERR Trigger: CCTCCTCTCATGCCCACCCACCCCTCTTCCTTCATCCCTTGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| 3UTR-3UTR TCA 90 bp | AAACACACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATCATTTTCTGCATTTGTaGGCAGAGAACAGGAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: KHTHTHTHIFHHGLHTTYHFLHL*AENRSG Trigger: TCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATG...ATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGTGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| 3UTR-3UTR TCA 90 bp | AAACACACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATGAGGTAGAGGTTGAATaGCAGGTAACTTTTCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: KHTHTHTHIFHHGLHTTYEVEVE*QVTFLR Trigger: TCTAAGAAAAGTTACCTGTCATTCAACCTCTACCTC...ATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGTGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| 3UTR CCA 72 bp | CCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTaGACAAGGGATGAAGGAAGAGGGGTGGGTGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: PPFSAFVSREQE*TRDEGRGVGGH Trigger: ATGCCCACCCACCCCTCTTCCTTCATCCCTTGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| 3UTR GCA 72 bp | CCTTGGGGTACTAGAACTTTCTCAGCCACCATTTTCTaGATTTGTGAGCAGAGAACAGGAGTGGACAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PWGTRTFSATIF*ICEQRTGVDKG Trigger: TCCCTTGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTCTAGTACCCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACAAGGTGCGCCGCCCAGAGTTaGACCATCAGTAGCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSQPPFSAFVSREQEWTRCAAQS*TISSGS Trigger: GCTGCCGCTACTGATGGTGCAACTCTGGGCGGCGCA...CCTTGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | TTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACAAGGGAGTGAGCACCCAGTTCTaGTCCACCAGGACACCCGCA | + |
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Preference number: 4 (lower is better) Translates to: FSATIFCICEQRTGVDKGVSTQF*STRTPA Trigger: TGCGGGTGTCCTGGTGGACCAGAACTGGGTGCTCAC...TCCCTTGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | AGAACTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACAGCGATGTGGCAGGATaGGGCCTGAGCAAGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: RTFSATIFCICEQRTGVDSDVAG*GLSKPD Trigger: ATCAGGCTTGCTCAGGCCCCATCCTGCCACATCGCT...GTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | CTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACAAGGCCACCGGAGTCACTCTaGCAAGAGTCTTGGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSQPPFSAFVSREQEWTRPPESL*QESWFP Trigger: CGGAAACCAAGACTCTTGCCAGAGTGACTCCGGTGG...CCTTGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR GCA 90 bp | GAACTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACACACCACATGGGTAAATaGCCCACGAGAGGACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELSQPPFSAFVSREQEWTHHMGK*PTRGRH Trigger: ATGGCGTCCTCTCGTGGGGCATTTACCCATGTGGTG...TGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR TCA 90 bp | ACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATGTAAGACACTCTTGCCCTGGCTaGGAGCAGCGGAAGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: THTHTHIFHHGLHTTYVRHSCPG*EQRKGS Trigger: ACTGCCCTTCCGCTGCTCTCAGCCAGGGCAAGAGTG...TCTTACATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | AGCTTCCTTGGGGTACTAGAACTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGGACACCCGCACATTaGAACTGGAGGTTATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SFLGVLELSQPPFSAFVSRTPAH*NWRLWK Trigger: CTTCCATAACCTCCAGTTCCAATGTGCGGGTGTCCT...GCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTCTAGTACCCCAAGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR TCA 90 bp | AGAACTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACGTATTTGCAGATCTCTaGGTAGACAGATGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTFSATIFCICEQRTGVDVFADL*VDRWVL Trigger: CAGCACCCATCTGTCTACTCAGAGATCTGCAAATAC...GTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | CATGGTCTCCATACAACATATGTAAGAGGTAGACAATTCATTGTCCCCATTTTACTGACACTCTTGCCCTaGCTGAGAGCAGCGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HGLHTTYVRGRQFIVPILLTLLP*LRAAEG Trigger: CCCTTCCGCTGCTCTCAGCCAGGGCAAGAGTGTCAG...TAAAATGGGGACAATGAATTGTCTACCTCTTACATATGTTGTATGGAGACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | GAACTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACAGTCTCACACTGCTTCTaGCTAAGGAGAGTTACCTTG | + |
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Preference number: 4 (lower is better) Translates to: ELSQPPFSAFVSREQEWTVSHCF*LRRVTL Trigger: CAAGGTAACTCTCCTTAGCCAGAAGCAGTGTGAGAC...TGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR TCA 90 bp | AAACACACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATGGGGTGGAAAACAGGTaGACTCGTGGACCGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: KHTHTHTHIFHHGLHTTYGVENR*TRGPQL Trigger: CAACTGCGGTCCACGAGTTCACCTGTTTTCCACCCC...ATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR GCA 90 bp | CACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATGTAAGCTCGTGGACCGCAGTTaGTCCTTCTGGAAAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTYTHTHIPSWSPYNICKLVDRS*SFWKSS Trigger: GCTGCTTTTCCAGAAGGAGCAACTGCGGTCCACGAG...CTTACATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | CATGGTCTCCATACAACATATGTAAGAGGTAGACAATTCATTGTCCCCATTTTACTGGGCAGCACCACATaGGTAAATGCCCCACGAGAG | + |
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Preference number: 4 (lower is better) Translates to: HGLHTTYVRGRQFIVPILLGSTT*VNAPRE Trigger: CTCTCGTGGGGCATTTACCCATGTGGTGCTGCCCAG...TAAAATGGGGACAATGAATTGTCTACCTCTTACATATGTTGTATGGAGACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | ATAACCAGATGGTGTTCATGTTCCTGTGTCAGTGACCATAAACACACACATACACGCAGTTGCTCCTTCTaGAAAAGCAGCAAGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ITRWCSCSCVSDHKHTHTRSCSF*KSSKWS Trigger: TGACCACTTGCTGCTTTTCCAGAAGGAGCAACTGCG...TGTATGTGTGTGTTTATGGTCACTGACACAGGAACATGAACACCATCTGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR GCA 90 bp | AAACACACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATATTTCTCCAGCAATGTaGGGCCGTGAGCACCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: KHTHTHTHIFHHGLHTTYISPAM*GREHPV Trigger: AACTGGGTGCTCACGGCCGCACATTGCTGGAGAAAT...ATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGTGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | ACACACACACACATATTCCATCATGGTCTCCATACAACATATGTAAGAGGTAGAAGCAAGCCTGATACTTaGGGTGGAAAACAGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: THTHIFHHGLHTTYVRGRSKPDT*GGKQVN Trigger: GTTCACCTGTTTTCCACCCCAAGTATCAGGCTTGCT...TCTACCTCTTACATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | CATGGTCTCCATACAACATATGTAAGAGGTAGACAATTCATTGTCCCCATTTTAGTTGGTGATCACACCTaGGTAGAAGGTCTCACACTG | + |
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Preference number: 4 (lower is better) Translates to: HGLHTTYVRGRQFIVPILVGDHT*VEGLTL Trigger: CAGTGTGAGACCTTCTACCCAGGTGTGATCACCAAC...TAAAATGGGGACAATGAATTGTCTACCTCTTACATATGTTGTATGGAGACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR GCA 90 bp | ACACACATATTCCATCATGGTCTCCATACAACATATGTAAGAGGTAGACAATTCTCCAGGGGGTGTATTTaGAGATCTCTGAGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: THIFHHGLHTTYVRGRQFSRGCI*RSLSRQ Trigger: CTGTCTACTCAGAGATCTGCAAATACACCCCCTGGA...GAATTGTCTACCTCTTACATATGTTGTATGGAGACCATGATGGAATATGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CCA 90 bp | ACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATGTAAGAAACTCGAGCTCTCAGTaGCTTATTTCTCCAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHIFHHGLHTTYVRNSSSQ*LISPAM Trigger: CATTGCTGGAGAAATAAGCCACTGAGAGCTCGAGTT...TCTTACATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS GCA 90 bp | GCCTCGAGGTCCACGCGCGTGGCGTTTCCCGGGAGCAGCAGAGCCTaGGCCGCCCAGAGTTGCACCATCAGTAGCGGCAGCAGAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASRSTRVAFPGSSRA*AAQSCTISSGSRSF Trigger: GAAGCTTCTGCTGCCGCTACTGATGGTGCAACTCTGGGCGGCGCAGGCTCTGCTGCTCCCGGGAAACGCCACGCGCGTGGACCTCGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS GCA 90 bp | TCTCTGAGTAGACAGATGGGTGCTGGGCAGCACCACATGGGTAAATaGCCCACGAGAGGACGCCATGCAGGGTGTCATCACACACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SLSRQMGAGQHHMGK*PTRGRHAGCHHTPG Trigger: CCCTGGTGTGTGATGACACCCTGCATGGCGTCCTCTCGTGGGGCATTTACCCATGTGGTGCTGCCCAGCACCCATCTGTCTACTCAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CCA 90 bp | CATCTGAGCGATGTGGCAGGATGGGGCCTGAGCAAGCCTGATACTTaGGGTGGAAAACAGGTGAACTCGTGGACCGCAGTTGCTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HLSDVAGWGLSKPDT*GGKQVNSWTAVAPS Trigger: AGAAGGAGCAACTGCGGTCCACGAGTTCACCTGTTTTCCACCCCAAGTATCAGGCTTGCTCAGGCCCCATCCTGCCACATCGCTCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS TCA 90 bp | GCACGTTGGACGTCAGCATTACAGGACTGCTCAGTTTCAGCATCATaGGGTCGTGTTCATCTGAGCGATGTGGCAGGATGGGGCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: ARWTSALQDCSVSAS*GRVHLSDVAGWGLS Trigger: GCTCAGGCCCCATCCTGCCACATCGCTCAGATGAACACGACCTCATGATGCTGAAACTGAGCAGTCCTGTAATGCTGACGTCCAACGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS TCA 90 bp | GAAACGAATGACTCTTCGGATCCAGGGGGTGTATTTGCAGATCTCTaGGTAGACAGATGGGTGCTGGGCAGCACCACATGGGTAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: ETNDSSDPGGVFADL*VDRWVLGSTTWVNA Trigger: GGCATTTACCCATGTGGTGCTGCCCAGCACCCATCTGTCTACTCAGAGATCTGCAAATACACCCCCTGGATCCGAAGAGTCATTCGTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CAA 90 bp | GAACTTTCTCAGCCACCATTTTCTGCATTTGTGAGCAGAGAACAGGAGTGGACAACTCGTGGACCGCAGTaGCTCCTTCTGGAAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ELSQPPFSAFVSREQEWTTRGPQ*LLLEKQ Trigger: CTGCTTTTCCAGAAGGAGCAACTGCGGTCCACGAGT...TGTCCACTCCTGTTCTCTGCTCACAAATGCAGAAAATGGTGGCTGAGAAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CAA 90 bp | AAACACACACATACACACACACACATATTCCATCATGGTCTCCATACAACATATACTCTGGCAAGAGTCTaGGTTTCCGTCTGCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KHTHTHTHIFHHGLHTTYTLARV*VSVCLS Trigger: GCTGAGGCAGACGGAAACCAAGACTCTTGCCAGAGT...ATATGTTGTATGGAGACCATGATGGAATATGTGTGTGTGTGTATGTGTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS-3UTR CAA 90 bp | CATGGTCTCCATACAACATATGTAAGAGGTAGACAATTCATTGTCCCCATTTTACAGCTCAGGCTCCTATaGTACTTCACTCTTCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HGLHTTYVRGRQFIVPILQLRLL*YFTLRL Trigger: CAGCCGAAGAGTGAAGTACAATAGGAGCCTGAGCTG...TAAAATGGGGACAATGAATTGTCTACCTCTTACATATGTTGTATGGAGACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS GCA 72 bp | TCCACGCGCGTGGCGTTTCCCGGGAGCAGCAGAGCCTaGGCCGCCCAGAGTTGCACCATCAGTAGCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STRVAFPGSSRA*AAQSCTISSGS Trigger: GCTGCCGCTACTGATGGTGCAACTCTGGGCGGCGCAGGCTCTGCTGCTCCCGGGAAACGCCACGCGCGTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS GCA 72 bp | AGACAGATGGGTGCTGGGCAGCACCACATGGGTAAATaGCCCACGAGAGGACGCCATGCAGGGTGTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: RQMGAGQHHMGK*PTRGRHAGCHH Trigger: GTGATGACACCCTGCATGGCGTCCTCTCGTGGGGCATTTACCCATGTGGTGCTGCCCAGCACCCATCTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CAA 72 bp | ACACTCTTGCCCTGGCTGAGAGCAGCGGAAGGGCAGTaGCACGGGATGCACGTTGGACGTCAGCATTACAGG | + |
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Preference number: 6 (lower is better) Translates to: TLLPWLRAAEGQ*HGMHVGRQHYR Trigger: CCTGTAATGCTGACGTCCAACGTGCATCCCGTGCAACTGCCCTTCCGCTGCTCTCAGCCAGGGCAAGAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS GCA 72 bp | AACTCGAGCTCTCAGTGGCTTATTTCTCCAGCAATGTaGGGCCGTGAGCACCCAGTTCTGGTCCACCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: NSSSQWLISPAM*GREHPVLVHQD Trigger: GTCCTGGTGGACCAGAACTGGGTGCTCACGGCCGCACATTGCTGGAGAAATAAGCCACTGAGAGCTCGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CCA 72 bp | GATGTGGCAGGATGGGGCCTGAGCAAGCCTGATACTTaGGGTGGAAAACAGGTGAACTCGTGGACCGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DVAGWGLSKPDT*GGKQVNSWTAV Trigger: AACTGCGGTCCACGAGTTCACCTGTTTTCCACCCCAAGTATCAGGCTTGCTCAGGCCCCATCCTGCCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CCA 72 bp | GAGAGCAGCGGAAGGGCAGTTGCACGGGATGCACGTTaGACGTCAGCATTACAGGACTGCTCAGTTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ESSGRAVARDAR*TSALQDCSVSA Trigger: TGCTGAAACTGAGCAGTCCTGTAATGCTGACGTCCAACGTGCATCCCGTGCAACTGCCCTTCCGCTGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CAA 72 bp | CACCAGGGGGCCACCGGAGTCACTCTGGCAAGAGTCTaGGTTTCCGTCTGCCTCAGCACAAATCATGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: HQGATGVTLARV*VSVCLSTNHAV Trigger: AACAGCATGATTTGTGCTGAGGCAGACGGAAACCAAGACTCTTGCCAGAGTGACTCCGGTGGCCCCCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CCA 72 bp | AACAGCTCAGGCTCCTATTGTACTTCACTCTTCGGCTaGCTGAGGTCCCCCAGCCTGAGACCTGACACTCTT | + |
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Preference number: 6 (lower is better) Translates to: NSSGSYCTSLFG*LRSPSLRPDTL Trigger: AAGAGTGTCAGGTCTCAGGCTGGGGGACCTCAGCCAGCCGAAGAGTGAAGTACAATAGGAGCCTGAGCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CAA 72 bp | CTAAGGAGAGTTACCTTGGAACAGCTCAGGCTCCTATaGTACTTCACTCTTCGGCTGGCTGAGGTCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRRVTLEQLRLL*YFTLRLAEVPQ Trigger: CTGGGGGACCTCAGCCAGCCGAAGAGTGAAGTACAATAGGAGCCTGAGCTGTTCCAAGGTAACTCTCCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS GCA 72 bp | ACCGGAGTCACTCTGGCAAGAGTCTTGGTTTCCGTCTaGCTCAGCACAAATCATGCTGTTGGTGATCACACC | + |
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Preference number: 6 (lower is better) Translates to: TGVTLARVLVSV*LSTNHAVGDHT Trigger: GGTGTGATCACCAACAGCATGATTTGTGCTGAGGCAGACGGAAACCAAGACTCTTGCCAGAGTGACTCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS TCA 72 bp | ACGTCAGCATTACAGGACTGCTCAGTTTCAGCATCATaGGGTCGTGTTCATCTGAGCGATGTGGCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: TSALQDCSVSAS*GRVHLSDVAGW Trigger: CCATCCTGCCACATCGCTCAGATGAACACGACCTCATGATGCTGAAACTGAGCAGTCCTGTAATGCTGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS TCA 72 bp | GGTTTCCGTCTGCCTCAGCACAAATCATGCTGTTGGTaGTCACACCTGGGTAGAAGGTCTCACACTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GFRLPQHKSCCW*SHLGRRSHTAS Trigger: AGAAGCAGTGTGAGACCTTCTACCCAGGTGTGATCACCAACAGCATGATTTGTGCTGAGGCAGACGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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| CDS CAA 72 bp | AAGGTCTCACACTGCTTCTGGCTAAGGAGAGTTACCTaGGAACAGCTCAGGCTCCTATTGTACTTCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: KVSHCFWLRRVT*EQLRLLLYFTL Trigger: AAGAGTGAAGTACAATAGGAGCCTGAGCTGTTCCAAGGTAACTCTCCTTAGCCAGAAGCAGTGTGAGACCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014058.11 |
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