Pregenerated sensors for KLHL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029312Ensembl transcript IDs: ENSMUST00000031254.9, ENSMUST00000112811.8, ENSMUST00000112815.8, ENSMUST00000131843.2
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTAGTTAAACAGTCACACACGGCCACACCGGCACCAGCTCGGCAGTaGGACACAGGTCCGACCAGCTCCCACTTGTTCAGCACGGGGTCA | + |
Preference number: 1 (lower is better) Translates to: LVKQSHTATPAPARQ*DTGPTSSHLFSTGS Trigger: TGACCCCGTGCTGAACAAGTGGGAGCTGGTCGGACCTGTGTCTCACTGCCGAGCTGGTGCCGGTGTGGCCGTGTGTGACTGTTTAACTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR GCA 90 bp | CATCACTGTTGCGATCCCTACGCCACCCCTGGGAGTGGTAAGAGCTaGCACATAGTCCCACTTGTTGCTTCGAGGGTCGTACCGTTCCAC | + |
Preference number: 1 (lower is better) Translates to: HHCCDPYATPGSGKS*HIVPLVASRVVPFH Trigger: GTGGAACGGTACGACCCTCGAAGCAACAAGTGGGACTATGTGGCAGCTCTTACCACTCCCAGGGGTGGCGTAGGGATCGCAACAGTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CCA 90 bp | AGAGGGTCAAACATCTCCATGCTGCCCAGGTGTTCGTTCCCATCATaGCCACCCACTGCGTACACCTTCCCTTCCACAGAGATCACACCC | + |
Preference number: 1 (lower is better) Translates to: RGSNISMLPRCSFPS*PPTAYTFPSTEITP Trigger: GGGTGTGATCTCTGTGGAAGGGAAGGTGTACGCAGTGGGTGGCCATGATGGGAACGAACACCTGGGCAGCATGGAGATGTTTGACCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CCA 90 bp | TCACTTCTATCCACTTGTCCAGATGCGGGTGATACCTCTCCACACTaGATAAGGAGGCTACGCCGTCGTTGCCGCCCACTGCGTAAACGT | + |
Preference number: 1 (lower is better) Translates to: SLLSTCPDAGDTSPH*IRRLRRRCRPLRKR Trigger: ACGTTTACGCAGTGGGCGGCAACGACGGCGTAGCCTCCTTATCCAGTGTGGAGAGGTATCACCCGCATCTGGACAAGTGGATAGAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR TCA 90 bp | ACGGGGTCAAACGCCTCCACGGTGTTTAGGTACGCGTTGCCATTGTaGCCGCCAACTGCAAAGATTTTGCCCATCACTGTTGCGATCCCT | + |
Preference number: 1 (lower is better) Translates to: TGSNASTVFRYALPL*PPTAKILPITVAIP Trigger: AGGGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTACCTAAACACCGTGGAGGCGTTTGACCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR GCA 90 bp | GTTGCCATTGTGACCGCCAACTGCAAAGATTTTGCCCATCACTGTTaGGATCCCTACGCCACCCCTGGGAGTGGTAAGAGCTGCCACATA | + |
Preference number: 1 (lower is better) Translates to: VAIVTANCKDFAHHC*DPYATPGSGKSCHI Trigger: TATGTGGCAGCTCTTACCACTCCCAGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAATGGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CCA 90 bp | CCAACGCCTCCACGGGGAGTGTTCATTGGTGCCACTGTGCTCCATTaGTCAGATTCGATGTCGTATCTCTCCACGTCACTGAAGCACGTA | + |
Preference number: 1 (lower is better) Translates to: PTPPRGVFIGATVLH*SDSMSYLSTSLKHV Trigger: TACGTGCTTCAGTGACGTGGAGAGATACGACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGAGGCGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR TCA 90 bp | GAATGGGTTCAAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTaGAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTCTCAC | + |
Preference number: 1 (lower is better) Translates to: EWVQDGLLPARSTVC*SRKELTWLYDNSSH Trigger: GTGAGAGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR GCA 90 bp | TGTTCAGCACGGGGTCAAACGCCTCCACGGTGTTTAGGTACGCGTTaGCATTGTGACCGCCAACTGCAAAGATTTTGCCCATCACTGTTG | + |
Preference number: 1 (lower is better) Translates to: CSARGQTPPRCLGTR*HCDRQLQRFCPSLL Trigger: CAACAGTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTACCTAAACACCGTGGAGGCGTTTGACCCCGTGCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR TCA 90 bp | TTGCTGGGACTTCATCACATACAGTCAACCACATTAGTGGACCCGTaGCCCACGTCTCGGATCTGGCTAGTTAAACAGTCACACACGGCC | + |
Preference number: 1 (lower is better) Translates to: LLGLHHIQSTTLVDP*PTSRIWLVKQSHTA Trigger: GGCCGTGTGTGACTGTTTAACTAGCCAGATCCGAGACGTGGGTCACGGGTCCACTAATGTGGTTGACTGTATGTGATGAAGTCCCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR TCA 90 bp | TGTCGTCAAAACCACCAACAACATATAAACAACCGTGAAGCTCGCTaGCGCCGTTGCCAGCTCTGCGCTGACCCATCTCTTTCACTTCTA | + |
Preference number: 1 (lower is better) Translates to: CRQNHQQHINNREAR*RRCQLCADPSLSLL Trigger: TAGAAGTGAAAGAGATGGGTCAGCGCAGAGCTGGCAACGGCGTCAGCGAGCTTCACGGTTGTTTATATGTTGTTGGTGGTTTTGACGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR TCA 90 bp | CTGTGCTCCATTGGTCAGATTCGATGTCGTATCTCTCCACGTCACTaGAGCACGTATTGTCATCTAATCCTCCAATTGCATATATTGGGC | + |
Preference number: 1 (lower is better) Translates to: LCSIGQIRCRISPRH*STYCHLILQLHILG Trigger: GCCCAATATATGCAATTGGAGGATTAGATGACAATACGTGCTTCAGTGACGTGGAGAGATACGACATCGAATCTGACCAATGGAGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR GCA 90 bp | CTCATGTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTaGCTGAAGTTAGTTTCTTCAGGAAAAAGAATAGATGAAACTCAA | + |
Preference number: 1 (lower is better) Translates to: LMLMSGHLSPLGKTY*LKLVSSGKRIDETQ Trigger: TTGAGTTTCATCTATTCTTTTTCCTGAAGAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAACATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | AGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACTTTGCCCATCACTGTTaGGATCCCTACGCCACCCCT | + |
Preference number: 2 (lower is better) Translates to: RWTWASHTLCLFTGRHTNFAHHC*DPYATP Trigger: AGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAA...GTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 90 bp | GCCAACGCCTCCACGGGGAGTGTTCATTGGTGCCACTGTGCTCCATaGGTCAGATTCGATGTCGTATCTCTCCACGTCACTGAAGCACGT | + |
Preference number: 2 (lower is better) Translates to: ANASTGSVHWCHCAP*VRFDVVSLHVTEAR Trigger: ACGTGCTTCAGTGACGTGGAGAGATACGACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGAGGCGTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | TCCCTCCCTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGATTGTGACCGCCAACTaGAAAGATTTTGCCCATCAC | + |
Preference number: 2 (lower is better) Translates to: SLPRWTWASHTLCLFTGRIVTAN*KDFAHH Trigger: GTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAAT...CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | AGTTCAAGGAACCTCCCCATTCCCTCCCTAGGTGGACATGGGCGTCACACACCCAGAAATTCTCCCGGGTaGGAAAAGAATAGCAGCCAC | + |
Preference number: 2 (lower is better) Translates to: SSRNLPIPSLGGHGRHTPRNSPG*EKNSSH Trigger: GTGGCTGCTATTCTTTTCCCACCCGGGAGAATTTCT...GGGTGTGTGACGCCCATGTCCACCTAGGGAGGGAATGGGGAGGTTCCTTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | GTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCATTCAGGGAGTGGTAAGAGCTaGCACATAGTCCCACTTGTT | + |
Preference number: 2 (lower is better) Translates to: VTHPLSFHWAAHERGSHSGSGKS*HIVPLV Trigger: AACAAGTGGGACTATGTGGCAGCTCTTACCACTCCC...TGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | TGCCAGCTCTGCGCTGACCCATCTCTTTCACTTCTATCCACTTGTCCAGATGCGCACAGTCAAAAGGCCTaGTGTCTTCCTGTCCATCAG | + |
Preference number: 2 (lower is better) Translates to: CQLCADPSLSLLSTCPDAHSQKA*CLPVHQ Trigger: CTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTG...CGCATCTGGACAAGTGGATAGAAGTGAAAGAGATGGGTCAGCGCAGAGCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | GTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCATTCATCTCATGTTGATGAGTaGACATCTCTCTCCTCTGGG | + |
Preference number: 2 (lower is better) Translates to: VTHPLSFHWAAHERGSHSSHVDE*TSLSSG Trigger: CCCAGAGGAGAGAGATGTCCACTCATCAACATGAGA...TGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR CAA 90 bp | GGTTTATTAAAGCCACAGAGCCAACGCCTCCACGGGGAGTGTTCATaGGTGCCACTGTGCTCCATTGGTCAGATTCGATGTCGTATCTCT | + |
Preference number: 2 (lower is better) Translates to: GLLKPQSQRLHGECS*VPLCSIGQIRCRIS Trigger: AGAGATACGACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGAGGCGTTGGCTCTGTGGCTTTAATAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 90 bp | AAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTaGCTGGGACTTCATCACATACAGTCAACCACATTAGTGGACCCG | + |
Preference number: 2 (lower is better) Translates to: KGLLSSCPSDGIVSL*LGLHHIQSTTLVDP Trigger: CGGGTCCACTAATGTGGTTGACTGTATGTGATGAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | GTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTGCTCACAGTCAAAAGGCCTaGTGTCTTCCTGTCCATCAG | + |
Preference number: 2 (lower is better) Translates to: VKRPAVFLSIRRDCVLVAHSQKA*CLPVHQ Trigger: CTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTG...AGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | AGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCGGGTTCAAGATGGGCTaGTTCCAGCCCGCTCCACTG | + |
Preference number: 2 (lower is better) Translates to: RENGSSLQIQRQTQRTKFGFKMG*FQPAPL Trigger: CAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCC...GAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | ACAGTCATCCCAAGAAATTCTCCCGGGTGGGAAAAGAATAGCAGCCACCAGACTCACAGTCAAAAGGCCTaGTGTCTTCCTGTCCATCAG | + |
Preference number: 2 (lower is better) Translates to: TVIPRNSPGWEKNSSHQTHSQKA*CLPVHQ Trigger: CTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTG...AGTCTGGTGGCTGCTATTCTTTTCCCACCCGGGAGAATTTCTTGGGATGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | AGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGGTTCAAGATGGGCTaGTTCCAGCCCGCTCCACTG | + |
Preference number: 2 (lower is better) Translates to: RKWILAPNPTTNPKNEVQGFKMG*FQPAPL Trigger: CAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCC...TTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | AGCAAGAATGGGTTCAAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTGAAAGGAAAGAGCTCACCTaGCTTTATGACAACAGCTCT | + |
Preference number: 2 (lower is better) Translates to: SKNGFKMGCFQPAPLFAERKELT*LYDNSS Trigger: AGAGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCT...TTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCCATTCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | GGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGAGCTATTTTAAGGTTTaGCACTACATCAAACATCTC | + |
Preference number: 2 (lower is better) Translates to: GGHGRHTPSVFSLGGTRTSYFKV*HYIKHL Trigger: GAGATGTTTGATGTAGTGCCAAACCTTAAAATAGCT...CGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | CATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCAGCTATTTTAAGGTTTaGCACTACATCAAACATCTC | + |
Preference number: 2 (lower is better) Translates to: HGRHTPSVFSLGGTRTRISYFKV*HYIKHL Trigger: GAGATGTTTGATGTAGTGCCAAACCTTAAAATAGCT...GATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR CAA 90 bp | TCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTaGTTGCTGGGACTTCATCACATACAGTCAACCACATTAGTGGAC | + |
Preference number: 2 (lower is better) Translates to: SKGLLSSCPSDGIVS*LLGLHHIQSTTLVD Trigger: GTCCACTAATGTGGTTGACTGTATGTGATGAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 90 bp | AGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATaGTGTCCTTGTTGCTGGGACTTCATCACATACAGTCAACCACAT | + |
Preference number: 2 (lower is better) Translates to: SHSQKACCLPVHQTG*CPCCWDFITYSQPH Trigger: ATGTGGTTGACTGTATGTGATGAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | ATGAATTCGTCAGCACCGTGTAGAATGATCCTCAAGGGAGCAGGCCTTAAGTTCTCATTGGTGCCACTGTaGTCCATTGGTCAGATTCGA | + |
Preference number: 2 (lower is better) Translates to: MNSSAPCRMILKGAGLKFSLVPL*SIGQIR Trigger: TCGAATCTGACCAATGGAGCACAGTGGCACCAATGA...GAACTTAAGGCCTGCTCCCTTGAGGATCATTCTACACGGTGCTGACGAATTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 90 bp | TGGTCAGATTCGATGTCGTATCTCTCCACGTCACTGAAGCACGTATaGTCATCTAATCCTCCAATTGCATATATTGGGCCCCCTAAGGAG | + |
Preference number: 2 (lower is better) Translates to: WSDSMSYLSTSLKHV*SSNPPIAYIGPPKE Trigger: CTCCTTAGGGGGCCCAATATATGCAATTGGAGGATTAGATGACAATACGTGCTTCAGTGACGTGGAGAGATACGACATCGAATCTGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR TCA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAACAAAAAGCAAGACATaGATTCGTCAGCACCGTGTA | + |
Preference number: 2 (lower is better) Translates to: PDFVRKPVQWCPVVLKLETKSKT*IRQHRV Trigger: TACACGGTGCTGACGAATTCATGTCTTGCTTTTTGT...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR TCA 90 bp | AGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCTACGCGTTGCCATTGTaGCCGCCAACTGCAAAGATT | + |
Preference number: 2 (lower is better) Translates to: RENGSSLQIQRQTQRTKFYALPL*PPTAKI Trigger: AATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTA...GAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | GACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATGAGGAAAGAGCTCACCTaGCTTTATGACAACAGCTCT | + |
Preference number: 2 (lower is better) Translates to: DFVRKPVQWCPVVLKLEMRKELT*LYDNSS Trigger: AGAGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCT...CATTTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | TCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTCCCCATAGGAAAGAGCTCACCTaGCTTTATGACAACAGCTCT | + |
Preference number: 2 (lower is better) Translates to: SLQIQRQTQRTKFKEPPHRKELT*LYDNSS Trigger: AGAGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCT...ATGGGGAGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | GAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGTCTCATGTTGATGAGTaGACATCTCTCTCCTCTGGG | + |
Preference number: 2 (lower is better) Translates to: ENGSSLQIQRQTQRTKFKSHVDE*TSLSSG Trigger: CCCAGAGGAGAGAGATGTCCACTCATCAACATGAGA...CTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR TCA 90 bp | GAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGATCTCTCCACGTCACTaGAGCACGTATTGTCATCTA | + |
Preference number: 2 (lower is better) Translates to: ENGSSLQIQRQTQRTKFKISPRH*STYCHL Trigger: TAGATGACAATACGTGCTTCAGTGACGTGGAGAGAT...CTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR GCA 90 bp | GATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTTTCCTTGGTGTTCATCGATaGCTTCATCATCCACTTGTT | + |
Preference number: 2 (lower is better) Translates to: DEWTSLSSGKNLLPEVSFLGVHR*LHHPLV Trigger: AACAAGTGGATGATGAAGGCATCGATGAACACCAAG...GAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | AGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAATCTCATGTTGATGAGTaGACATCTCTCTCCTCTGGG | + |
Preference number: 2 (lower is better) Translates to: RKWILAPNPTTNPKNEVQSHVDE*TSLSSG Trigger: CCCAGAGGAGAGAGATGTCCACTCATCAACATGAGA...TTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR-3UTR TCA 90 bp | CGTTCCACGGAACTCAAAGGGGAGTTGTCGTCAAAACCACCAACAACATATAAAACAAAAAGCAAGACATaGATTCGTCAGCACCGTGTA | + |
Preference number: 2 (lower is better) Translates to: RSTELKGELSSKPPTTYKTKSKT*IRQHRV Trigger: TACACGGTGCTGACGAATTCATGTCTTGCTTTTTGT...TTTATATGTTGTTGGTGGTTTTGACGACAACTCCCCTTTGAGTTCCGTGGAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR-3UTR CCA 90 bp | CATGTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGAGTAAAGAGAAAATaGATCCTCGCTCCAAATCCA | + |
Preference number: 2 (lower is better) Translates to: HVDEWTSLSSGKNLLPEVRVKRK*ILAPNP Trigger: TGGATTTGGAGCGAGGATCCATTTTCTCTTTACTCT...AACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR CCA 72 bp | GTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTaGGCGGCACACGAACGCGGATCTCATTCACCGGGC | + |
Preference number: 3 (lower is better) Translates to: VDMGVTHPLSFH*AAHERGSHSPG Trigger: GCCCGGTGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | TCCCTCCCTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGAGCCCGCTCCACTGTTaGCTGAAGCAGGAAAGAGCT | + |
Preference number: 3 (lower is better) Translates to: SLPRWTWASHTLCLFTGRSPLHC*LKQERA Trigger: AGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCT...CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | CTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGATTTTGCCCATCACTGTaGCGATCCCTACGCCACCCC | + |
Preference number: 3 (lower is better) Translates to: LGGHGRHTPSVFSLGGTRFCPSL*RSLRHP Trigger: GGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAA...TCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR GCA 72 bp | TGCGATCCCTACGCCACCCCTGGGAGTGGTAAGAGCTaGCACATAGTCCCACTTGTTGCTTCGAGGGTCGTA | + |
Preference number: 3 (lower is better) Translates to: CDPYATPGSGKS*HIVPLVASRVV Trigger: TACGACCCTCGAAGCAACAAGTGGGACTATGTGGCAGCTCTTACCACTCCCAGGGGTGGCGTAGGGATCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR CCA 72 bp | TTCAAGGAACCTCCCCATTCCCTCCCTAGGTGGACATaGGCGTCACACACCCTCTGTCTTTTCACTGGGCGG | + |
Preference number: 3 (lower is better) Translates to: FKEPPHSLPRWT*ASHTLCLFTGR Trigger: CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGAATGGGGAGGTTCCTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR GCA 72 bp | GTGACCGCCAACTGCAAAGATTTTGCCCATCACTGTTaGGATCCCTACGCCACCCCTGGGAGTGGTAAGAGC | + |
Preference number: 3 (lower is better) Translates to: VTANCKDFAHHC*DPYATPGSGKS Trigger: GCTCTTACCACTCCCAGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGCGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR GCA 72 bp | ACGCGTTGCCATTGTGACCGCCAACTGCAAAGATTTTaGCCATCACTGTTGCGATCCCTACGCCACCCCTGG | + |
Preference number: 3 (lower is better) Translates to: TRCHCDRQLQRF*PSLLRSLRHPW Trigger: CCAGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAATGGCAACGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR CCA 72 bp | AGCCACAGAGCCAACGCCTCCACGGGGAGTGTTCATTaGTGCCACTGTGCTCCATTGGTCAGATTCGATGTC | + |
Preference number: 3 (lower is better) Translates to: SHRANASTGSVH*CHCAPLVRFDV Trigger: GACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGAGGCGTTGGCTCTGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | CATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCGGGATTGTGTCCTTGTaGCTGGGACTTCATCACATA | + |
Preference number: 3 (lower is better) Translates to: HGRHTPSVFSLGGTRTRIGIVSL*LGLHHI Trigger: TATGTGATGAAGTCCCAGCAACAAGGACACAATCCC...GATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR GCA 72 bp | CGGGGTCAAACGCCTCCACGGTGTTTAGGTACGCGTTaGCATTGTGACCGCCAACTGCAAAGATTTTGCCCA | + |
Preference number: 3 (lower is better) Translates to: RGQTPPRCLGTR*HCDRQLQRFCP Trigger: TGGGCAAAATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTACCTAAACACCGTGGAGGCGTTTGACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | AGTTCAAGGAACCTCCCCATTCCCTCCCTAGGTGGACATGGGCGTCACACACCCGCCTTCATCATCCACTaGTTAGTGAGAGGGTCAAAC | + |
Preference number: 3 (lower is better) Translates to: SSRNLPIPSLGGHGRHTPAFIIH*LVRGSN Trigger: GTTTGACCCTCTCACTAACAAGTGGATGATGAAGGC...GGGTGTGTGACGCCCATGTCCACCTAGGGAGGGAATGGGGAGGTTCCTTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR TCA 72 bp | CAAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTaGAGCAGGAAAGAGCTCACCTGGCTTTATGACAAC | + |
Preference number: 3 (lower is better) Translates to: QDGLLPARSTVC*SRKELTWLYDN Trigger: GTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR GCA 72 bp | CAACGCCTCCACGGGGAGTGTTCATTGGTGCCACTGTaGTCCATTGGTCAGATTCGATGTCGTATCTCTCCA | + |
Preference number: 3 (lower is better) Translates to: QRLHGECSLVPL*SIGQIRCRISP Trigger: TGGAGAGATACGACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGAGGCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR CCA 72 bp | ACGAAGTTCAAGGAACCTCCCCATTCCCTCCCTAGGTaGACATGGGCGTCACACACCCTCTGTCTTTTCACT | + |
Preference number: 3 (lower is better) Translates to: TKFKEPPHSLPR*TWASHTLCLFT Trigger: AGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGAATGGGGAGGTTCCTTGAACTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR CCA 72 bp | CCACGGGGAGTGTTCATTGGTGCCACTGTGCTCCATTaGTCAGATTCGATGTCGTATCTCTCCACGTCACTG | + |
Preference number: 3 (lower is better) Translates to: PRGVFIGATVLH*SDSMSYLSTSL Trigger: CAGTGACGTGGAGAGATACGACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | GACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATGCCGACCAGCTCCCACTaGTTCAGCACGGGGTCAAAC | + |
Preference number: 3 (lower is better) Translates to: DFVRKPVQWCPVVLKLEMPTSSH*FSTGSN Trigger: GTTTGACCCCGTGCTGAACAAGTGGGAGCTGGTCGG...CATTTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR TCA 72 bp | AACCACCAACAACATATAAACAACCGTGAAGCTCGCTaGCGCCGTTGCCAGCTCTGCGCTGACCCATCTCTT | + |
Preference number: 3 (lower is better) Translates to: NHQQHINNREAR*RRCQLCADPSL Trigger: AAGAGATGGGTCAGCGCAGAGCTGGCAACGGCGTCAGCGAGCTTCACGGTTGTTTATATGTTGTTGGTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR TCA 72 bp | ATCTCTTTCACTTCTATCCACTTGTCCAGATGCGGGTaGTACCTCTCCACACTGGATAAGGAGGCTACGCCG | + |
Preference number: 3 (lower is better) Translates to: ISFTSIHLSRCG*YLSTLDKEATP Trigger: CGGCGTAGCCTCCTTATCCAGTGTGGAGAGGTATCACCCGCATCTGGACAAGTGGATAGAAGTGAAAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR TCA 72 bp | AACGCCTCCACGGTGTTTAGGTACGCGTTGCCATTGTaGCCGCCAACTGCAAAGATTTTGCCCATCACTGTT | + |
Preference number: 3 (lower is better) Translates to: NASTVFRYALPL*PPTAKILPITV Trigger: AACAGTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTACCTAAACACCGTGGAGGCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR CCA 72 bp | GTTTGGCACTACATCAAACATCTCTCAGAGCAAGAATaGGTTCAAGATGGGCTGCTTCCAGCCCGCTCCACT | + |
Preference number: 3 (lower is better) Translates to: VWHYIKHLSEQE*VQDGLLPARST Trigger: AGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | CATGTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGCCCGCTCCACTGTTaGCTGAAGCAGGAAAGAGCT | + |
Preference number: 3 (lower is better) Translates to: HVDEWTSLSSGKNLLPEVSPLHC*LKQERA Trigger: AGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCT...AACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | ATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACAGCCCGCTCCACTGTTaGCTGAAGCAGGAAAGAGCT | + |
Preference number: 3 (lower is better) Translates to: MDPRSKSNDKPKERSSRNSPLHC*LKQERA Trigger: AGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCT...GTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
3UTR-3UTR CAA 90 bp | TGTGTCCTTGTTGCTGGGACTTCATCACATACAGTCAACCACATTAGTGGACCCCTCCAATTGCATATATaGGGCCCCCTAAGGAGGCCA | + |
Preference number: 3 (lower is better) Translates to: CVLVAGTSSHTVNHISGPLQLHI*GPLRRP Trigger: TGGCCTCCTTAGGGGGCCCAATATATGCAATTGGAG...GGGTCCACTAATGTGGTTGACTGTATGTGATGAAGTCCCAGCAACAAGGACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR GCA 72 bp | TTCAAAAACAGTCGCTGCAGTCACAGTCAAAAGGCCTaGTGTCTTCCTGTCCATCAGACGGGATTGTGTCCT | + |
Preference number: 3 (lower is better) Translates to: FKNSRCSHSQKA*CLPVHQTGLCP Trigger: AGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACTGTTTTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR GCA 72 bp | GGCCAAGGCAATTCCTCGCCTCTTGGTGTTCATCGATaGCTTCATCATCCACTTGTTAGTGAGAGGGTCAAA | + |
Preference number: 3 (lower is better) Translates to: GQGNSSPLGVHR*LHHPLVSERVK Trigger: TTTGACCCTCTCACTAACAAGTGGATGATGAAGGCATCGATGAACACCAAGAGGCGAGGAATTGCCTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
3UTR TCA 72 bp | CTTCATCACATACAGTCAACCACATTAGTGGACCCGTaGCCCACGTCTCGGATCTGGCTAGTTAAACAGTCA | + |
Preference number: 3 (lower is better) Translates to: LHHIQSTTLVDP*PTSRIWLVKQS Trigger: TGACTGTTTAACTAGCCAGATCCGAGACGTGGGTCACGGGTCCACTAATGTGGTTGACTGTATGTGATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CCA 72 bp | TCAAGGGAGCAGGCCTTAAGTTCTCATGTTGATGAGTaGACATCTCTCTCCTCTGGGAAAAACCTACTGCCT | + |
Preference number: 3 (lower is better) Translates to: SREQALSSHVDE*TSLSSGKNLLP Trigger: AGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAACATGAGAACTTAAGGCCTGCTCCCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR TCA 72 bp | TCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTaGCATTCAAAAACAGTCGCTGCAGTCACAGTCAAA | + |
Preference number: 3 (lower is better) Translates to: SPVSPQTCIHNS*HSKTVAAVTVK Trigger: TTTGACTGTGACTGCAGCGACTGTTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR GCA 72 bp | GTGTATTCACAACAGCTGACATTCAAAAACAGTCGCTaGAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTC | + |
Preference number: 3 (lower is better) Translates to: VYSQQLTFKNSR*SHSQKACCLPV Trigger: GACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACTGTTTTTGAATGTCAGCTGTTGTGAATACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR CCA 72 bp | ACCAGGACAGTGACAAATGACAGAGTAAAGAGAAAATaGATCCTCGCTCCAAATCCAACGACAAACCCAAAG | + |
Preference number: 3 (lower is better) Translates to: TRTVTNDRVKRK*ILAPNPTTNPK Trigger: CTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCTTTACTCTGTCATTTGTCACTGTCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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3UTR TCA 72 bp | ATTGGTCAGATTCGATGTCGTATCTCTCCACGTCACTaGAGCACGTATTGTCATCTAATCCTCCAATTGCAT | + |
Preference number: 3 (lower is better) Translates to: IGQIRCRISPRH*STYCHLILQLH Trigger: ATGCAATTGGAGGATTAGATGACAATACGTGCTTCAGTGACGTGGAGAGATACGACATCGAATCTGACCAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR GCA 72 bp | ATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTaGCTGAAGTTAGTTTCTTCAGGAAAAAGAATAGAT | + |
Preference number: 3 (lower is better) Translates to: MSGHLSPLGKTY*LKLVSSGKRID Trigger: ATCTATTCTTTTTCCTGAAGAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | AAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCCAGGAGAGAGCCGTaGAAGTCCTTCCAGGCCTCG | + |
Preference number: 4 (lower is better) Translates to: KMGCFQPAPLFAEAGKSSPRREP*KSFQAS Trigger: CGAGGCCTGGAAGGACTTTCACGGCTCTCTCCTGGG...TGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | GTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCATTCACCCAGGAGAGAGCCGTaGAAGTCCTTCCAGGCCTCG | + |
Preference number: 4 (lower is better) Translates to: VTHPLSFHWAAHERGSHSPRREP*KSFQAS Trigger: CGAGGCCTGGAAGGACTTTCACGGCTCTCTCCTGGG...TGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CCA 90 bp | TCCCTCCCTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGGAGGAGAGGAGCTTGTaGAGATGTTGCGGGGACACA | + |
Preference number: 4 (lower is better) Translates to: SLPRWTWASHTLCLFTGREERSL*RCCGDT Trigger: TGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTC...CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | GGTCGTACCGTTCCACGGAACTCAAAGGGGAGTTGTCGTCAAAACCACCAACAACCCAGGAGAGAGCCGTaGAAGTCCTTCCAGGCCTCG | + |
Preference number: 4 (lower is better) Translates to: GRTVPRNSKGSCRQNHQQPRREP*KSFQAS Trigger: CGAGGCCTGGAAGGACTTTCACGGCTCTCTCCTGGG...TTGTTGGTGGTTTTGACGACAACTCCCCTTTGAGTTCCGTGGAACGGTACGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | CATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCGCCACAACACCCATaGGAAAATCAACTGGCAGCA | + |
Preference number: 4 (lower is better) Translates to: HGRHTPSVFSLGGTRTRISPQHP*ENQLAA Trigger: TGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCGA...GATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | AGTCGCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGAGACCTGCTCCTCACTTaGTGCTGCTGTTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: SRCSHSQKACCLPVHQTGDLLLT*CCCCCC Trigger: GCAGCAGCAACAGCAGCAGCAAGTGAGGAGCAGGTC...TCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | ACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCATTCACCGCACCCACATGTCGCCTaGGGCTGTTCATTTCTGGTC | + |
Preference number: 4 (lower is better) Translates to: THPLSFHWAAHERGSHSPHPHVA*GCSFLV Trigger: GACCAGAAATGAACAGCCGCAGGCGACATGTGGGTG...CGGTGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | AGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACATCAACTGGCAGCAATaGCAGACGGACCTTCAGGGT | + |
Preference number: 4 (lower is better) Translates to: RWTWASHTLCLFTGRHTNINWQQ*QTDLQG Trigger: ACCCTGAAGGTCCGTCTGCCATTGCTGCCAGTTGAT...GTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112811.8 |
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CDS-3UTR TCA 90 bp | AGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACTCGCCACAACACCCATaGGAAAATCAACTGGCAGCA | + |
Preference number: 4 (lower is better) Translates to: RWTWASHTLCLFTGRHTNSPQHP*ENQLAA Trigger: TGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCGA...GTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | AATGGGTTCAAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTGAAGCAGGATCGGTTGTGACTCTCTaGGAAGGCTCGTACAGCCAG | + |
Preference number: 4 (lower is better) Translates to: NGFKMGCFQPAPLFAEAGSVVTL*EGSYSQ Trigger: CTGGCTGTACGAGCCTTCGCAGAGAGTCACAACCGA...TCCTGCTTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | GCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTGCTGGGACTTCCACCCACATGTCGCCTaGGGCTGTTCATTTCTGGTC | + |
Preference number: 4 (lower is better) Translates to: ACCLPVHQTGLCPCCWDFHPHVA*GCSFLV Trigger: GACCAGAAATGAACAGCCGCAGGCGACATGTGGGTG...GAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | AGTCGCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTTGCCCATCACTGTTaGGATCCCTACGCCACCCCT | + |
Preference number: 4 (lower is better) Translates to: SRCSHSQKACCLPVHQTGFAHHC*DPYATP Trigger: AGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAA...TCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
3UTR CAA 72 bp | AAGCCACAGAGCCAACGCCTCCACGGGGAGTGTTCATaGGTGCCACTGTGCTCCATTGGTCAGATTCGATGT | + |
Preference number: 4 (lower is better) Translates to: KPQSQRLHGECS*VPLCSIGQIRC Trigger: ACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGAGGCGTTGGCTCTGTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
||
CDS-3UTR TCA 90 bp | TTCAAAAACAGTCGCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCCCAGGAGAGAGCCGTaGAAGTCCTTCCAGGCCTCG | + |
Preference number: 4 (lower is better) Translates to: FKNSRCSHSQKACCLPVHPRREP*KSFQAS Trigger: CGAGGCCTGGAAGGACTTTCACGGCTCTCTCCTGGG...ATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACTGTTTTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
CDS-3UTR GCA 90 bp | CTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACCACTTCAGTAAAGTaGTCACAGGCATACTGGTCC | + |
Preference number: 4 (lower is better) Translates to: LGGHGRHTPSVFSLGGTRTTSVK*SQAYWS Trigger: GGACCAGTATGCCTGTGAGCACTTTACTGAAGTGGT...TCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | CTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGATCATTGGTGCCACTGTaGTCCATTGGTCAGATTCGA | + |
Preference number: 4 (lower is better) Translates to: LGGHGRHTPSVFSLGGTRSLVPL*SIGQIR Trigger: TCGAATCTGACCAATGGAGCACAGTGGCACCAATGA...TCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR TCA 90 bp | GTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTGCTCGCCCCTTTGTCACGTaGCTCCTAGCTTGTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: VKRPAVFLSIRRDCVLVARPFVT*LLACFP Trigger: TGGGAAACAAGCTAGGAGTCACGTGACAAAGGGGCG...AGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
CDS-3UTR TCA 90 bp | TCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGCGCCCCTTTGTCACGTaGCTCCTAGCTTGTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: SQSKGLLSSCPSDGIVSLRPFVT*LLACFP Trigger: TGGGAAACAAGCTAGGAGTCACGTGACAAAGGGGCG...CAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
CDS-3UTR TCA 90 bp | AGTCGCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATACGCGTTGCCATTGTaGCCGCCAACTGCAAAGATT | + |
Preference number: 4 (lower is better) Translates to: SRCSHSQKACCLPVHQTGYALPL*PPTAKI Trigger: AATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTA...TCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | AAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCAGGGAGTGGTAAGAGCTaGCACATAGTCCCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: KMGCFQPAPLFAEAGKSSGSGKS*HIVPLV Trigger: AACAAGTGGGACTATGTGGCAGCTCTTACCACTCCC...TGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | TCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTTGCCCATCACTGTTaGGATCCCTACGCCACCCCT | + |
Preference number: 4 (lower is better) Translates to: SQSKGLLSSCPSDGIVSLFAHHC*DPYATP Trigger: AGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAA...CAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | CTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGACAACTGCAAAGATTTTaGCCATCACTGTTGCGATCC | + |
Preference number: 4 (lower is better) Translates to: LGGHGRHTPSVFSLGGTRQLQRF*PSLLRS Trigger: GGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...TCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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3UTR CAA 72 bp | TCCACGGGGAGTGTTCATTGGTGCCACTGTGCTCCATaGGTCAGATTCGATGTCGTATCTCTCCACGTCACT | + |
Preference number: 4 (lower is better) Translates to: STGSVHWCHCAP*VRFDVVSLHVT Trigger: AGTGACGTGGAGAGATACGACATCGAATCTGACCAATGGAGCACAGTGGCACCAATGAACACTCCCCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAACGCCCCTTTGTCACGTaGCTCCTAGCTTGTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: PDFVRKPVQWCPVVLKLERPFVT*LLACFP Trigger: TGGGAAACAAGCTAGGAGTCACGTGACAAAGGGGCG...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | ACAGTCATCCCAAGAAATTCTCCCGGGTGGGAAAAGAATAGCAGCCACCAGACTCGCCCCTTTGTCACGTaGCTCCTAGCTTGTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: TVIPRNSPGWEKNSSHQTRPFVT*LLACFP Trigger: TGGGAAACAAGCTAGGAGTCACGTGACAAAGGGGCG...AGTCTGGTGGCTGCTATTCTTTTCCCACCCGGGAGAATTTCTTGGGATGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | ATGAATTCGTCAGCACCGTGTAGAATGATCCTCAAGGGAGCAGGCCTTAAGTTCCGCCATCACACTCACTaGCAGAGGACCTGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: MNSSAPCRMILKGAGLKFRHHTH*QRTCSS Trigger: TGAGGAGCAGGTCCTCTGTCAGTGAGTGTGATGGCG...GAACTTAAGGCCTGCTCCCTTGAGGATCATTCTACACGGTGCTGACGAATTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | GTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCATTCAAGGCAGTTGGAGGGATaGAAGTGTAGCTGCATGTAT | + |
Preference number: 4 (lower is better) Translates to: VTHPLSFHWAAHERGSHSRQLEG*KCSCMY Trigger: ATACATGCAGCTACACTTTCATCCCTCCAACTGCCT...TGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATGGACCTGCTCCTCACTTaGTGCTGCTGTTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: DFVRKPVQWCPVVLKLEMDLLLT*CCCCCC Trigger: GCAGCAGCAACAGCAGCAGCAAGTGAGGAGCAGGTC...CATTTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CCA 90 bp | GCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTACAGCCAGGCAGTTaGAGGGATGAAAGTGTAGCT | + |
Preference number: 4 (lower is better) Translates to: AAVTVKRPAVFLSIRRDCVQPGS*RDESVA Trigger: AGCTACACTTTCATCCCTCCAACTGCCTGGCTGTAC...ACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | TCGTCAGCACCGTGTAGAATGATCCTCAAGGGAGCAGGCCTTAAGTTCTCATGTGAGGAGAGGAGCTTGTaGAGATGTTGCGGGGACACA | + |
Preference number: 4 (lower is better) Translates to: SSAPCRMILKGAGLKFSCEERSL*RCCGDT Trigger: TGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTC...ACATGAGAACTTAAGGCCTGCTCCCTTGAGGATCATTCTACACGGTGCTGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | GCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTTGTCCACTGTTAAAGTaGGCCGTGAGGAGTAGACAA | + |
Preference number: 4 (lower is better) Translates to: AAVTVKRPAVFLSIRRDCCPLLK*AVRSRQ Trigger: TTGTCTACTCCTCACGGCTCACTTTAACAGTGGACA...ACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS-3UTR TCA 90 bp | AATGGGTTCAAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTGAAGCAGGAATCTCTCCACGTCACTaGAGCACGTATTGTCATCTA | + |
Preference number: 4 (lower is better) Translates to: NGFKMGCFQPAPLFAEAGISPRH*STYCHL Trigger: TAGATGACAATACGTGCTTCAGTGACGTGGAGAGAT...TCCTGCTTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTTTCGACCTGCTCCTCACTTaGTGCTGCTGTTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: DEWTSLSSGKNLLPEVSFDLLLT*CCCCCC Trigger: GCAGCAGCAACAGCAGCAGCAAGTGAGGAGCAGGTC...GAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | GTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTGACCTGCTCCTCACTTaGTGCTGCTGTTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: VDEWTSLSSGKNLLPEVSDLLLT*CCCCCC Trigger: GCAGCAGCAACAGCAGCAGCAAGTGAGGAGCAGGTC...ACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | CCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAACAGTCGCTGTCGGTTGTGACTCTCTaGGAAGGCTCGTACAGCCAG | + |
Preference number: 4 (lower is better) Translates to: PSVHRRVFTTADIQKQSLSVVTL*EGSYSQ Trigger: CTGGCTGTACGAGCCTTCGCAGAGAGTCACAACCGA...CAGCGACTGTTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATGTTTGCCCATCACTGTTaGGATCCCTACGCCACCCCT | + |
Preference number: 4 (lower is better) Translates to: DFVRKPVQWCPVVLKLEMFAHHC*DPYATP Trigger: AGGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAA...CATTTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | GTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTGCTATTCACAACAAGCTCTaGCCACCAGCTCAACCTGCA | + |
Preference number: 4 (lower is better) Translates to: VKRPAVFLSIRRDCVLVAIHNKL*PPAQPA Trigger: TGCAGGTTGAGCTGGTGGCCAGAGCTTGTTGTGAAT...AGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS-3UTR CCA 90 bp | TCGTCAGCACCGTGTAGAATGATCCTCAAGGGAGCAGGCCTTAAGTTCTCATGTACGGGGAGTGTTCATTaGTGCCACTGTGCTCCATTG | + |
Preference number: 4 (lower is better) Translates to: SSAPCRMILKGAGLKFSCTGSVH*CHCAPL Trigger: CAATGGAGCACAGTGGCACCAATGAACACTCCCCGT...ACATGAGAACTTAAGGCCTGCTCCCTTGAGGATCATTCTACACGGTGCTGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | TTTATGACAACAGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGTGGCAAGAAGCCACTTaGTGGCAGCACTGTAGACCT | + |
Preference number: 4 (lower is better) Translates to: FMTTALTRQSTDVYSQQLWQEAT*WQHCRP Trigger: AGGTCTACAGTGCTGCCATCAAGTGGCTTCTTGCCA...CAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCTGTTGTCATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | GACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATGTGGCAAGAAGCCACTTaGTGGCAGCACTGTAGACCT | + |
Preference number: 4 (lower is better) Translates to: DFVRKPVQWCPVVLKLEMWQEAT*WQHCRP Trigger: AGGTCTACAGTGCTGCCATCAAGTGGCTTCTTGCCA...CATTTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | CTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGACTTCAGATTCTGCTTaGCGATCTGTTCTTTCGCCA | + |
Preference number: 4 (lower is better) Translates to: LQSQSKGLLSSCPSDGIVTSDSA*RSVLSP Trigger: TGGCGAAAGAACAGATCGTCAAGCAGAATCTGAAGT...CACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | GCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTTACGCGTTGCCATTGTaGCCGCCAACTGCAAAGATT | + |
Preference number: 4 (lower is better) Translates to: APLFAEAGKSSPGFMTTAYALPL*PPTAKI Trigger: AATCTTTGCAGTTGGCGGTCACAATGGCAACGCGTA...AGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GTGTCCTGTAGTTCTGAAACTCGAAATGGAAGCGAAGGCCTTCTTACAGACACTCTCCTCACTTGCTGCTaGTGTTGCTGCTGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: VSCSSETRNGSEGLLTDTLLTCC*CCCCCW Trigger: CCAACAGCAGCAGCAACAGCAGCAGCAAGTGAGGAG...AGTGTCTGTAAGAAGGCCTTCGCTTCCATTTCGAGTTTCAGAACTACAGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | AGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAACTGCTCCTCACTTGCTaGTGCTGTTGCTGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SSHPSVHRRVFTTADIQKLLLTC*CCCCCC Trigger: ACAGCAGCAGCAACAGCAGCAGCAAGTGAGGAGCAG...TTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | ACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCAAGATGGGCTGCTTCCAGCTGCTCCTCACTTGCTaGTGCTGTTGCTGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: TTSNISQSKNGFKMGCFQLLLTC*CCCCCC Trigger: ACAGCAGCAGCAACAGCAGCAGCAAGTGAGGAGCAG...CTGGAAGCAGCCCATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | CACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTCCGGGACTGGTTTACTaGTCAAGTGAAGGTGGTAAT | + |
Preference number: 4 (lower is better) Translates to: HSQKACCLPVHQTGLCPCPGLVY*SSEGGN Trigger: ATTACCACCTTCACTTGAGCAGTAAACCAGTCCCGG...ACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTCATAGTCCCACTTGTTaGTTCGAGGGTCGTACCGTT | + |
Preference number: 4 (lower is better) Translates to: APLFAEAGKSSPGFMTTAHSPTC*FEGRTV Trigger: AACGGTACGACCCTCGAAGCAACAAGTGGGACTATG...AGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | TCGTCAGCACCGTGTAGAATGATCCTCAAGGGAGCAGGCCTTAAGTTCTCATGTGGGAGTGGTAAGAGCTaGCACATAGTCCCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: SSAPCRMILKGAGLKFSCGSGKS*HIVPLV Trigger: AACAAGTGGGACTATGTGGCAGCTCTTACCACTCCC...ACATGAGAACTTAAGGCCTGCTCCCTTGAGGATCATTCTACACGGTGCTGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | TCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTCCCCATTGCTCACAGGCATACTaGTCCGCCATGTCCATTAGG | + |
Preference number: 4 (lower is better) Translates to: SLQIQRQTQRTKFKEPPHCSQAY*SAMSIR Trigger: CCTAATGGACATGGCGGACCAGTATGCCTGTGAGCA...ATGGGGAGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | GGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTATCAACTGGCAGCAATaGCAGACGGACCTGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: GSSLQIQRQTQRTKFKEPINWQQ*QTDLCK Trigger: CTTGCACAGGTCCGTCTGCCATTGCTGCCAGTTGAT...AGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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3UTR CAA 72 bp | AGCACGTATTGTCATCTAATCCTCCAATTGCATATATaGGGCCCCCTAAGGAGGCCAAGGCAATTCCTCGCC | + |
Preference number: 4 (lower is better) Translates to: STYCHLILQLHI*GPLRRPRQFLA Trigger: GGCGAGGAATTGCCTTGGCCTCCTTAGGGGGCCCAATATATGCAATTGGAGGATTAGATGACAATACGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 72 bp | CGAGGGTCGTACCGTTCCACGGAACTCAAAGGGGAGTaGTCGTCAAAACCACCAACAACATATAAACAACCG | + |
Preference number: 4 (lower is better) Translates to: RGSYRSTELKGE*SSKPPTTYKQP Trigger: CGGTTGTTTATATGTTGTTGGTGGTTTTGACGACAACTCCCCTTTGAGTTCCGTGGAACGGTACGACCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 72 bp | CTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTaGTTGCTGGGACTTCATCACATACAGTCAACCACA | + |
Preference number: 4 (lower is better) Translates to: LLSSCPSDGIVS*LLGLHHIQSTT Trigger: TGTGGTTGACTGTATGTGATGAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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3UTR CAA 72 bp | CAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATaGTGTCCTTGTTGCTGGGACTTCATCACATACAGT | + |
Preference number: 4 (lower is better) Translates to: QKACCLPVHQTG*CPCCWDFITYS Trigger: ACTGTATGTGATGAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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CDS-3UTR TCA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAAGGCAGTTGGAGGGATaGAAGTGTAGCTGCATGTAT | + |
Preference number: 4 (lower is better) Translates to: PDFVRKPVQWCPVVLKLERQLEG*KCSCMY Trigger: ATACATGCAGCTACACTTTCATCCCTCCAACTGCCT...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | GGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTTCGCCACAACACCCATaGGAAAATCAACTGGCAGCA | + |
Preference number: 4 (lower is better) Translates to: GSSLQIQRQTQRTKFKEPSPQHP*ENQLAA Trigger: TGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCGA...AGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | CACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTACTTCAGATTCTGCTTaGCGATCTGTTCTTTCGCCA | + |
Preference number: 4 (lower is better) Translates to: HSQKACCLPVHQTGLCPCTSDSA*RSVLSP Trigger: TGGCGAAAGAACAGATCGTCAAGCAGAATCTGAAGT...ACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | GAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGCTCCTCACTTGCTGCTaGTGTTGCTGCTGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: ENGSSLQIQRQTQRTKFKLLTCC*CCCCCW Trigger: CCAACAGCAGCAGCAACAGCAGCAGCAAGTGAGGAG...CTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
CDS-3UTR GCA 90 bp | AGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCCTCCTCACTTGCTGCTaGTGTTGCTGCTGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: RENGSSLQIQRQTQRTKFLLTCC*CCCCCW Trigger: CCAACAGCAGCAGCAACAGCAGCAGCAAGTGAGGAG...GAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
||
CDS-3UTR GCA 90 bp | AGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCCACCCACATGTCGCCTaGGGCTGTTCATTTCTGGTC | + |
Preference number: 4 (lower is better) Translates to: RENGSSLQIQRQTQRTKFHPHVA*GCSFLV Trigger: GACCAGAAATGAACAGCCGCAGGCGACATGTGGGTG...GAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | AGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAAGGGAGTGTTCATTGGTaGCACTGTGCTCCATTGGTC | + |
Preference number: 4 (lower is better) Translates to: SSHPSVHRRVFTTADIQKGSVHW*HCAPLV Trigger: GACCAATGGAGCACAGTGGCACCAATGAACACTCCC...TTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | TCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTCCCCATGTACAGCCAGGCAGTTaGAGGGATGAAAGTGTAGCT | + |
Preference number: 4 (lower is better) Translates to: SLQIQRQTQRTKFKEPPHVQPGS*RDESVA Trigger: AGCTACACTTTCATCCCTCCAACTGCCTGGCTGTAC...ATGGGGAGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | GATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTTTCTGCTCACAGGCATACTaGTCCGCCATGTCCATTAGG | + |
Preference number: 4 (lower is better) Translates to: DEWTSLSSGKNLLPEVSFCSQAY*SAMSIR Trigger: CCTAATGGACATGGCGGACCAGTATGCCTGTGAGCA...GAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | GTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTATCAACTGGCAGCAATaGCAGACGGACCTGTGCAAG | + |
Preference number: 4 (lower is better) Translates to: VDEWTSLSSGKNLLPEVSINWQQ*QTDLCK Trigger: CTTGCACAGGTCCGTCTGCCATTGCTGCCAGTTGAT...ACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | TGGCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCAAGATGGGCTGCTTACGGGGAGTGTTCATTaGTGCCACTGTGCTCCATTG | + |
Preference number: 4 (lower is better) Translates to: WHYIKHLSEQEWVQDGLLTGSVH*CHCAPL Trigger: CAATGGAGCACAGTGGCACCAATGAACACTCCCCGT...AAGCAGCCCATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | GCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTATTCACAACAAGCTCTaGCCACCAGCTCAACCTTCA | + |
Preference number: 4 (lower is better) Translates to: APLFAEAGKSSPGFMTTAIHNKL*PPAQPS Trigger: TGAAGGTTGAGCTGGTGGCCAGAGCTTGTTGTGAAT...AGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112815.8 |
||
CDS-3UTR TCA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATCTCTCCACGTCACTaGAGCACGTATTGTCATCTA | + |
Preference number: 4 (lower is better) Translates to: PDFVRKPVQWCPVVLKLEISPRH*STYCHL Trigger: TAGATGACAATACGTGCTTCAGTGACGTGGAGAGAT...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTCCGGGACTGGTTTACTaGTCAAGTGAAGGTGGTAAT | + |
Preference number: 4 (lower is better) Translates to: GSSLQIQRQTQRTKFKEPPGLVY*SSEGGN Trigger: ATTACCACCTTCACTTGAGCAGTAAACCAGTCCCGG...AGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | CCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAACAGTCGCTGCCGGGACTGGTTTACTaGTCAAGTGAAGGTGGTAAT | + |
Preference number: 4 (lower is better) Translates to: PSVHRRVFTTADIQKQSLPGLVY*SSEGGN Trigger: ATTACCACCTTCACTTGAGCAGTAAACCAGTCCCGG...CAGCGACTGTTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
||
CDS-3UTR GCA 90 bp | TTTATGACAACAGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGTCATTGGTGCCACTGTaGTCCATTGGTCAGATTCGA | + |
Preference number: 4 (lower is better) Translates to: FMTTALTRQSTDVYSQQLSLVPL*SIGQIR Trigger: TCGAATCTGACCAATGGAGCACAGTGGCACCAATGA...CAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCTGTTGTCATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGGGAGTGTTCATTGGTaGCACTGTGCTCCATTGGTC | + |
Preference number: 4 (lower is better) Translates to: ENGSSLQIQRQTQRTKFKGSVHW*HCAPLV Trigger: GACCAATGGAGCACAGTGGCACCAATGAACACTCCC...CTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | ATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACGGGAGTGGTAAGAGCTaGCACATAGTCCCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: MDPRSKSNDKPKERSSRNGSGKS*HIVPLV Trigger: AACAAGTGGGACTATGTGGCAGCTCTTACCACTCCC...GTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTCAACTGCAAAGATTTTaGCCATCACTGTTGCGATCC | + |
Preference number: 4 (lower is better) Translates to: APLFAEAGKSSPGFMTTAQLQRF*PSLLRS Trigger: GGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...AGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATTGTGACCGCCAACTaGAAAGATTTTGCCCATCAC | + |
Preference number: 4 (lower is better) Translates to: PDFVRKPVQWCPVVLKLEIVTAN*KDFAHH Trigger: GTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAAT...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | CCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAACAGTCGCTGGCGGCTGTTCATTTCTaGTCCAAAGAACCAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: PSVHRRVFTTADIQKQSLAAVHF*SKEPAV Trigger: AACAGCTGGTTCTTTGGACCAGAAATGAACAGCCGC...CAGCGACTGTTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | TCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTCCCCATGCCAGCACCAGTTTGTaGCAAGATATTAGCTTTGAG | + |
Preference number: 4 (lower is better) Translates to: SLQIQRQTQRTKFKEPPHASTSL*QDISFE Trigger: CTCAAAGCTAATATCTTGTCACAAACTGGTGCTGGC...ATGGGGAGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS-3UTR TCA 90 bp | GACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAATGAAAGAAACATGGCTCTaGAGTAGGGGATCACACAAG | + |
Preference number: 4 (lower is better) Translates to: DFVRKPVQWCPVVLKLEMKETWL*SRGSHK Trigger: CTTGTGTGATCCCCTACTTCAGAGCCATGTTTCTTT...CATTTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS-3UTR TCA 90 bp | ATGAATTCGTCAGCACCGTGTAGAATGATCCTCAAGGGAGCAGGCCTTAAGTTCACTTCAGATTCTGCTTaGCGATCTGTTCTTTCGCCA | + |
Preference number: 4 (lower is better) Translates to: MNSSAPCRMILKGAGLKFTSDSA*RSVLSP Trigger: TGGCGAAAGAACAGATCGTCAAGCAGAATCTGAAGT...GAACTTAAGGCCTGCTCCCTTGAGGATCATTCTACACGGTGCTGACGAATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAACTTGGTGTTCATCGATaGCTTCATCATCCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: PDFVRKPVQWCPVVLKLELGVHR*LHHPLV Trigger: AACAAGTGGATGATGAAGGCATCGATGAACACCAAG...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | GTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTGCGGCTGTTCATTTCTaGTCCAAAGAACCAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: VDEWTSLSSGKNLLPEVSAAVHF*SKEPAV Trigger: AACAGCTGGTTCTTTGGACCAGAAATGAACAGCCGC...ACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CCA 90 bp | AGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAAGCGGCTGTTCATTTCTaGTCCAAAGAACCAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: SSHPSVHRRVFTTADIQKAAVHF*SKEPAV Trigger: AACAGCTGGTTCTTTGGACCAGAAATGAACAGCCGC...TTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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3UTR CAA 72 bp | CTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTaGCTGGGACTTCATCACATACAGTCAACCACATTA | + |
Preference number: 4 (lower is better) Translates to: LSSCPSDGIVSL*LGLHHIQSTTL Trigger: TAATGTGGTTGACTGTATGTGATGAAGTCCCAGCAACAAGGACACAATCCCGTCTGATGGACAGGAAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | AAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCACTTCAGTAAAGTaGTCACAGGCATACTGGTCC | + |
Preference number: 4 (lower is better) Translates to: KWILAPNPTTNPKNEVQGTTSVK*SQAYWS Trigger: GGACCAGTATGCCTGTGAGCACTTTACTGAAGTGGT...TCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | GGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGAACCTCTTGGTGTTCATCGATaGCTTCATCATCCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: GSSLQIQRQTQRTKFKEPLGVHR*LHHPLV Trigger: AACAAGTGGATGATGAAGGCATCGATGAACACCAAG...AGGTTCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | AGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCTCATTGGTGCCACTGTaGTCCATTGGTCAGATTCGA | + |
Preference number: 4 (lower is better) Translates to: RENGSSLQIQRQTQRTKFSLVPL*SIGQIR Trigger: TCGAATCTGACCAATGGAGCACAGTGGCACCAATGA...GAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | CATGTTGATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTCAACTGCAAAGATTTTaGCCATCACTGTTGCGATCC | + |
Preference number: 4 (lower is better) Translates to: HVDEWTSLSSGKNLLPEVQLQRF*PSLLRS Trigger: GGATCGCAACAGTGATGGGCAAAATCTTTGCAGTTG...AACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATCAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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3UTR CAA 72 bp | TCGATGTCGTATCTCTCCACGTCACTGAAGCACGTATaGTCATCTAATCCTCCAATTGCATATATTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: SMSYLSTSLKHV*SSNPPIAYIGP Trigger: GGGCCCAATATATGCAATTGGAGGATTAGATGACAATACGTGCTTCAGTGACGTGGAGAGATACGACATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131843.2 |
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CDS-3UTR GCA 90 bp | GCTATTTTAAGGTTTGGCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCCATAGTCCCACTTGTTaGTTCGAGGGTCGTACCGTT | + |
Preference number: 4 (lower is better) Translates to: AILRFGTTSNISQSKNGFHSPTC*FEGRTV Trigger: AACGGTACGACCCTCGAAGCAACAAGTGGGACTATG...GAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGCCAAACCTTAAAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | CGAAATGGAAGCGAAGGCCTTCTTACAGACACTAATATGGTTTCAAGAATGTTTCATAGTCCCACTTGTTaGTTCGAGGGTCGTACCGTT | + |
Preference number: 4 (lower is better) Translates to: RNGSEGLLTDTNMVSRMFHSPTC*FEGRTV Trigger: AACGGTACGACCCTCGAAGCAACAAGTGGGACTATG...AAACATTCTTGAAACCATATTAGTGTCTGTAAGAAGGCCTTCGCTTCCATTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | AGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAATTGTGACCGCCAACTaGAAAGATTTTGCCCATCAC | + |
Preference number: 4 (lower is better) Translates to: RKWILAPNPTTNPKNEVQIVTAN*KDFAHH Trigger: GTGATGGGCAAAATCTTTGCAGTTGGCGGTCACAAT...TTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR GCA 90 bp | AGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAACTTGGTGTTCATCGATaGCTTCATCATCCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: RKWILAPNPTTNPKNEVQLGVHR*LHHPLV Trigger: AACAAGTGGATGATGAAGGCATCGATGAACACCAAG...TTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR TCA 90 bp | TTTAAGGTTTGGCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCAAGATATCTCTCCACGTCACTaGAGCACGTATTGTCATCTA | + |
Preference number: 4 (lower is better) Translates to: FKVWHYIKHLSEQEWVQDISPRH*STYCHL Trigger: TAGATGACAATACGTGCTTCAGTGACGTGGAGAGAT...ATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGCCAAACCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | TCCCTCCCTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCCGACCAGCTCCCACTaGTTCAGCACGGGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: SLPRWTWASHTLCLFTGRPTSSH*FSTGSN Trigger: GTTTGACCCCGTGCTGAACAAGTGGGAGCTGGTCGG...CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | CTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACACGATCCTTCCAGGCCTCGTaGGCTTCGAAGATGAAGGAG | + |
Preference number: 5 (lower is better) Translates to: LGGHGRHTPSVFSLGGTRSFQAS*ASKMKE Trigger: CTCCTTCATCTTCGAAGCCAACGAGGCCTGGAAGGA...TCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | GCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTCCGACCAGCTCCCACTaGTTCAGCACGGGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: AAVTVKRPAVFLSIRRDCPTSSH*FSTGSN Trigger: GTTTGACCCCGTGCTGAACAAGTGGGAGCTGGTCGG...ACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS TCA 90 bp | GCATGTATTCACAACAAGCTCTGGCCACCAGCTCAACCTTCAGGGTaGCGTCGCAGAGCTCCCCGTTTTCATAGAAGCCCAGGAGAGAGC | + |
Preference number: 5 (lower is better) Translates to: ACIHNKLWPPAQPSG*RRRAPRFHRSPGES Trigger: GCTCTCTCCTGGGCTTCTATGAAAACGGGGAGCTCTGCGACGTCACCCTGAAGGTTGAGCTGGTGGCCAGAGCTTGTTGTGAATACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | TCCCTCCCTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCACGTGACTCCTAGCTaGTTTCCCATTGGTAGATTC | + |
Preference number: 5 (lower is better) Translates to: SLPRWTWASHTLCLFTGRHVTPS*FPIGRF Trigger: GAATCTACCAATGGGAAACAAGCTAGGAGTCACGTG...CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | TCCCTCCCTAGGTGGACATGGGCGTCACACACCCTCTGTCTTTTCACTGGGCGGCCATTTAGGATGATGTaGCGGATTGGCAAGAAGCCA | + |
Preference number: 5 (lower is better) Translates to: SLPRWTWASHTLCLFTGRPFRMM*RIGKKP Trigger: TGGCTTCTTGCCAATCCGCAACATCATCCTAAATGG...CCGCCCAGTGAAAAGACAGAGGGTGTGTGACGCCCATGTCCACCTAGGGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CCA 90 bp | TGCTTCTCACTGTCAATGTTGAGGTCGCTAGAGGAGAGGAGCTTGTaGAGATGTTGCGGGGACACACTCACGAAGTCTTCGCACTCCACC | + |
Preference number: 5 (lower is better) Translates to: CFSLSMLRSLEERSL*RCCGDTLTKSSHST Trigger: GGTGGAGTGCGAAGACTTCGTGAGTGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAGCGACCTCAACATTGACAGTGAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTTCCTTCCAGGCCTCGTaGGCTTCGAAGATGAAGGAG | + |
Preference number: 5 (lower is better) Translates to: AAVTVKRPAVFLSIRRDCSFQAS*ASKMKE Trigger: CTCCTTCATCTTCGAAGCCAACGAGGCCTGGAAGGA...ACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | CTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTCCAGGCCTCGTaGGCTTCGAAGATGAAGGAG | + |
Preference number: 5 (lower is better) Translates to: LQSQSKGLLSSCPSDGIVSFQAS*ASKMKE Trigger: CTCCTTCATCTTCGAAGCCAACGAGGCCTGGAAGGA...CACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | TCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTTTGCCCATCACTGTaGCGATCCCTACGCCACCCC | + |
Preference number: 5 (lower is better) Translates to: SQSKGLLSSCPSDGIVSLFCPSL*RSLRHP Trigger: GGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAA...CAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS GCA 90 bp | GGGGACACACTCACGAAGTCTTCGCACTCCACCACTTCAGTAAAGTaGTCACAGGCATACTGGTCCGCCATGTCCATTAGGTCTATTCGG | + |
Preference number: 5 (lower is better) Translates to: GDTLTKSSHSTTSVK*SQAYWSAMSIRSIR Trigger: CCGAATAGACCTAATGGACATGGCGGACCAGTATGCCTGTGAGCACTTTACTGAAGTGGTGGAGTGCGAAGACTTCGTGAGTGTGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CCA 90 bp | GTGCTTCCTCGGGGTCGTCCTGACTGTGTACTCAAAGTCCGGGACTaGTTTACTGCTCAAGTGAAGGTGGTAATTTCTCGCTTCGTCCAG | + |
Preference number: 5 (lower is better) Translates to: VLPRGRPDCVLKVRD*FTAQVKVVISRFVQ Trigger: CTGGACGAAGCGAGAAATTACCACCTTCACTTGAGCAGTAAACCAGTCCCGGACTTTGAGTACACAGTCAGGACGACCCCGAGGAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS CCA 90 bp | CTTGACGATCTGTTCTTTCGCCACAACACCCATGAGAAAATCAACTaGCAGCAATGGCAGACGGACCTTCAGGGTGACGTCGCAGAGCTC | + |
Preference number: 5 (lower is better) Translates to: LDDLFFRHNTHEKIN*QQWQTDLQGDVAEL Trigger: GAGCTCTGCGACGTCACCCTGAAGGTCCGTCTGCCATTGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCGAAAGAACAGATCGTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112811.8 |
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CDS-3UTR CAA 90 bp | CACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGTTCCTTCCAGGCCTCGTaGGCTTCGAAGATGAAGGAG | + |
Preference number: 5 (lower is better) Translates to: HSQKACCLPVHQTGLCPCSFQAS*ASKMKE Trigger: CTCCTTCATCTTCGAAGCCAACGAGGCCTGGAAGGA...ACAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | ACACACCCTCTGTCTTTTCACTGGGCGGCACACGAACGCGGATCTCATTCACCGCACTTCAGATTCTGCTaGACGATCTGTTCTTTCGCC | + |
Preference number: 5 (lower is better) Translates to: THPLSFHWAAHERGSHSPHFRFC*TICSFA Trigger: GGCGAAAGAACAGATCGTCAAGCAGAATCTGAAGTG...CGGTGAATGAGATCCGCGTTCGTGTGCCGCCCAGTGAAAAGACAGAGGGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS TCA 90 bp | GCACCAGTTTGTGACAAGATATTAGCTTTGAGCCAACCTTCAGGGTaGCGTCGCAGAGCTCCCCGTTTTCATAGAAGCCCAGGAGAGAGC | + |
Preference number: 5 (lower is better) Translates to: APVCDKILALSQPSG*RRRAPRFHRSPGES Trigger: GCTCTCTCCTGGGCTTCTATGAAAACGGGGAGCTCTGCGACGTCACCCTGAAGGTTGGCTCAAAGCTAATATCTTGTCACAAACTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS GCA 90 bp | TGTAGCTGCATGTATTCACAACAAGCTCTGGCCACCAGCTCAACCTaGAGAATACACGCTGCATACAGCAGGGGCTGGACATTGTCCACT | + |
Preference number: 5 (lower is better) Translates to: CSCMYSQQALATSST*RIHAAYSRGWTLST Trigger: AGTGGACAATGTCCAGCCCCTGCTGTATGCAGCGTGTATTCTGCAGGTTGAGCTGGTGGCCAGAGCTTGTTGTGAATACATGCAGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS CCA 90 bp | CTTGACGATCTGTTCTTTCGCCACAACACCCATGAGAAAATCAACTaGCAGCAATGGCAGACGGACCTGTGCAAGTGTCTCGTCCAGCCA | + |
Preference number: 5 (lower is better) Translates to: LDDLFFRHNTHEKIN*QQWQTDLCKCLVQP Trigger: TGGCTGGACGAGACACTTGCACAGGTCCGTCTGCCATTGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCGAAAGAACAGATCGTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | AGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAAGGACCTGCTCCTCACTaGCTGCTGCTGTTGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: SSHPSVHRRVFTTADIQKGPAPH*LLLLLL Trigger: CAGCAGCAACAGCAGCAGCAAGTGAGGAGCAGGTCC...TTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | GCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCAAGATGGGCTGCTTCCCTAGAGGAGAGGAGCTaGTGGAGATGTTGCGGGGAC | + |
Preference number: 5 (lower is better) Translates to: ALHQTSLRARMGSRWAASLEERS*WRCCGD Trigger: GTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAG...GGAAGCAGCCCATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | CCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAACAGTCGCTGCTAGAGGAGAGGAGCTaGTGGAGATGTTGCGGGGAC | + |
Preference number: 5 (lower is better) Translates to: PSVHRRVFTTADIQKQSLLEERS*WRCCGD Trigger: GTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAG...CAGCGACTGTTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTCACGGGGAGTGTTCATaGGTGCCACTGTGCTCCATT | + |
Preference number: 5 (lower is better) Translates to: APLFAEAGKSSPGFMTTAHGECS*VPLCSI Trigger: AATGGAGCACAGTGGCACCAATGAACACTCCCCGTG...AGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCAAGATGGGCTGCTTCCTTTTGCCCATCACTGTaGCGATCCCTACGCCACCCC | + |
Preference number: 5 (lower is better) Translates to: ALHQTSLRARMGSRWAASFCPSL*RSLRHP Trigger: GGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAA...GGAAGCAGCCCATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS TCA 90 bp | TACACGCTGCATACAGCAGGGGCTGGACATTGTCCACTGTTAAAGTaGGCCGTGAGGAGTAGACAAACTTCACCAAGTCTTCCACGGCAT | + |
Preference number: 5 (lower is better) Translates to: YTLHTAGAGHCPLLK*AVRSRQTSPSLPRH Trigger: ATGCCGTGGAAGACTTGGTGAAGTTTGTCTACTCCTCACGGCTCACTTTAACAGTGGACAATGTCCAGCCCCTGCTGTATGCAGCGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS GCA 90 bp | AACACCCATGAGAAAATCAACTGGCAGCAATGGCAGACGGACCTGTaGAAGTGTCTCGTCCAGCCATTTAGGATGATGTTGCGGATTGGC | + |
Preference number: 5 (lower is better) Translates to: NTHEKINWQQWQTDL*KCLVQPFRMMLRIG Trigger: GCCAATCCGCAACATCATCCTAAATGGCTGGACGAGACACTTGCACAGGTCCGTCTGCCATTGCTGCCAGTTGATTTTCTCATGGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CCA 90 bp | CTATTCGGTTGTGACTCTCTGCGAAGGCTCGTACAGCCAGGCAGTTaGAGGGATGAAAGTGTAGCTGCATGTATTCACAACAAGCTCTGG | + |
Preference number: 5 (lower is better) Translates to: LFGCDSLRRLVQPGS*RDESVAACIHNKLW Trigger: CCAGAGCTTGTTGTGAATACATGCAGCTACACTTTCATCCCTCCAACTGCCTGGCTGTACGAGCCTTCGCAGAGAGTCACAACCGAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | AGCAAGAATGGGTTCAAGATGGGCTGCTTCCAGCCCGCTCCACTGTTTGCTGAAGCCTTCATCATCCACTaGTTAGTGAGAGGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: SKNGFKMGCFQPAPLFAEAFIIH*LVRGSN Trigger: GTTTGACCCTCTCACTAACAAGTGGATGATGAAGGC...TTCAGCAAACAGTGGAGCGGGCTGGAAGCAGCCCATCTTGAACCCATTCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | TGGCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCAAGATGGGCTGCTTTTTTGCCCATCACTGTaGCGATCCCTACGCCACCCC | + |
Preference number: 5 (lower is better) Translates to: WHYIKHLSEQEWVQDGLLFCPSL*RSLRHP Trigger: GGGGTGGCGTAGGGATCGCAACAGTGATGGGCAAAA...AAGCAGCCCATCTTGAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGCCA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTCCAACTGCAAAGATTTaGCCCATCACTGTTGCGATC | + |
Preference number: 5 (lower is better) Translates to: AAVTVKRPAVFLSIRRDCPTAKI*PITVAI Trigger: GATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...ACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | TCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCAGACGGGATTGTGTCCTTGCCATTTAGGATGATGTaGCGGATTGGCAAGAAGCCA | + |
Preference number: 5 (lower is better) Translates to: SQSKGLLSSCPSDGIVSLPFRMM*RIGKKP Trigger: TGGCTTCTTGCCAATCCGCAACATCATCCTAAATGG...CAAGGACACAATCCCGTCTGATGGACAGGAAGACAGCAGGCCTTTTGACTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | TTTATGACAACAGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGCTCCAATTGCATATATaGGGCCCCCTAAGGAGGCCA | + |
Preference number: 5 (lower is better) Translates to: FMTTALTRQSTDVYSQQLLQLHI*GPLRRP Trigger: TGGCCTCCTTAGGGGGCCCAATATATGCAATTGGAG...CAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCTGTTGTCATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTTTCCACGGGGAGTGTTCATaGGTGCCACTGTGCTCCATT | + |
Preference number: 5 (lower is better) Translates to: DEWTSLSSGKNLLPEVSFHGECS*VPLCSI Trigger: AATGGAGCACAGTGGCACCAATGAACACTCCCCGTG...GAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | ACAGTCATCCCAAGAAATTCTCCCGGGTGGGAAAAGAATAGCAGCCACCAGACTCACGTGACTCCTAGCTaGTTTCCCATTGGTAGATTC | + |
Preference number: 5 (lower is better) Translates to: TVIPRNSPGWEKNSSHQTHVTPS*FPIGRF Trigger: GAATCTACCAATGGGAAACAAGCTAGGAGTCACGTG...AGTCTGGTGGCTGCTATTCTTTTCCCACCCGGGAGAATTTCTTGGGATGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | GCTCCACTGTTTGCTGAAGCAGGAAAGAGCTCACCTGGCTTTATGACAACAGCTCACGTGACTCCTAGCTaGTTTCCCATTGGTAGATTC | + |
Preference number: 5 (lower is better) Translates to: APLFAEAGKSSPGFMTTAHVTPS*FPIGRF Trigger: GAATCTACCAATGGGAAACAAGCTAGGAGTCACGTG...AGCTGTTGTCATAAAGCCAGGTGAGCTCTTTCCTGCTTCAGCAAACAGTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | CCAGACTTCGTGAGGAAGCCAGTACAGTGGTGTCCTGTAGTTCTGAAACTCGAAGCCTTCATCATCCACTaGTTAGTGAGAGGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: PDFVRKPVQWCPVVLKLEAFIIH*LVRGSN Trigger: GTTTGACCCTCTCACTAACAAGTGGATGATGAAGGC...TTCGAGTTTCAGAACTACAGGACACCACTGTACTGGCTTCCTCACGAAGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | AAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGGACACGGGGAGTGTTCATaGGTGCCACTGTGCTCCATT | + |
Preference number: 5 (lower is better) Translates to: KWILAPNPTTNPKNEVQGHGECS*VPLCSI Trigger: AATGGAGCACAGTGGCACCAATGAACACTCCCCGTG...TCCTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCAAGCTCCAATTGCATATATaGGGCCCCCTAAGGAGGCCA | + |
Preference number: 5 (lower is better) Translates to: ENGSSLQIQRQTQRTKFKLQLHI*GPLRRP Trigger: TGGCCTCCTTAGGGGGCCCAATATATGCAATTGGAG...CTTGAACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | TTCAAAAACAGTCGCTGCAGTCACAGTCAAAAGGCCTGCTGTCTTCCTGTCCATCCAACTGCAAAGATTTaGCCCATCACTGTTGCGATC | + |
Preference number: 5 (lower is better) Translates to: FKNSRCSHSQKACCLPVHPTAKI*PITVAI Trigger: GATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...ATGGACAGGAAGACAGCAGGCCTTTTGACTGTGACTGCAGCGACTGTTTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | CGAAATGGAAGCGAAGGCCTTCTTACAGACACTAATATGGTTTCAAGAATGTTTCCGACCAGCTCCCACTaGTTCAGCACGGGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: RNGSEGLLTDTNMVSRMFPTSSH*FSTGSN Trigger: GTTTGACCCCGTGCTGAACAAGTGGGAGCTGGTCGG...AAACATTCTTGAAACCATATTAGTGTCTGTAAGAAGGCCTTCGCTTCCATTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS TCA 90 bp | TTAACGCCTGCTTGGCTTCAGACATTTCGGAAAGAAACATGGCTCTaGAGTAGGGGATCACACAAGCCAGCACCAGTTTGTGACAAGATA | + |
Preference number: 5 (lower is better) Translates to: LTPAWLQTFRKETWL*SRGSHKPAPVCDKI Trigger: TATCTTGTCACAAACTGGTGCTGGCTTGTGTGATCCCCTACTTCAGAGCCATGTTTCTTTCCGAAATGTCTGAAGCCAAGCAGGCGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS-3UTR CAA 90 bp | AGCTCTCACCCGTCAGTCCACAGACGTGTATTCACAACAGCTGACATTCAAAAACACGTGACTCCTAGCTaGTTTCCCATTGGTAGATTC | + |
Preference number: 5 (lower is better) Translates to: SSHPSVHRRVFTTADIQKHVTPS*FPIGRF Trigger: GAATCTACCAATGGGAAACAAGCTAGGAGTCACGTG...TTTTTGAATGTCAGCTGTTGTGAATACACGTCTGTGGACTGACGGGTGAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 ENSMUST00000131843.2 |
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CDS-3UTR CAA 90 bp | GATGAGTGGACATCTCTCTCCTCTGGGAAAAACCTACTGCCTGAAGTTAGTTTCCACTTCAGATTCTGCTaGACGATCTGTTCTTTCGCC | + |
Preference number: 5 (lower is better) Translates to: DEWTSLSSGKNLLPEVSFHFRFC*TICSFA Trigger: GGCGAAAGAACAGATCGTCAAGCAGAATCTGAAGTG...GAAACTAACTTCAGGCAGTAGGTTTTTCCCAGAGGAGAGAGATGTCCACTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GCTATTTTAAGGTTTGGCACTACATCAAACATCTCTCAGAGCAAGAATGGGTTCCTCCAATTGCATATATaGGGCCCCCTAAGGAGGCCA | + |
Preference number: 5 (lower is better) Translates to: AILRFGTTSNISQSKNGFLQLHI*GPLRRP Trigger: TGGCCTCCTTAGGGGGCCCAATATATGCAATTGGAG...GAACCCATTCTTGCTCTGAGAGATGTTTGATGTAGTGCCAAACCTTAAAATAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS CCA 90 bp | TTCCACAGAGATCACACCCACATGTCGCCTGCGGCTGTTCATTTCTaGTCCAAAGAACCAGCTGTTTTTGTTGATAGAATAGCATTCAAT | + |
Preference number: 5 (lower is better) Translates to: FHRDHTHMSPAAVHF*SKEPAVFVDRIAFN Trigger: ATTGAATGCTATTCTATCAACAAAAACAGCTGGTTCTTTGGACCAGAAATGAACAGCCGCAGGCGACATGTGGGTGTGATCTCTGTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | AAGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTGCCTTCATCATCCACTaGTTAGTGAGAGGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: KRKWILAPNPTTNPKNEVAFIIH*LVRGSN Trigger: GTTTGACCCTCTCACTAACAAGTGGATGATGAAGGC...AACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | AAGAGAAAATGGATCCTCGCTCCAAATCCAACGACAAACCCAAAGAACGAAGTTCCAACTGCAAAGATTTaGCCCATCACTGTTGCGATC | + |
Preference number: 5 (lower is better) Translates to: KRKWILAPNPTTNPKNEVPTAKI*PITVAI Trigger: GATCGCAACAGTGATGGGCAAAATCTTTGCAGTTGG...AACTTCGTTCTTTGGGTTTGTCGTTGGATTTGGAGCGAGGATCCATTTTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS-3UTR CAA 90 bp | GAAACACATAAACATTTTCCCTACTTCATAAACACCCAAGAACTGAAAGTCACCCACTTCAGATTCTGCTaGACGATCTGTTCTTTCGCC | + |
Preference number: 5 (lower is better) Translates to: ETHKHFPYFINTQELKVTHFRFC*TICSFA Trigger: GGCGAAAGAACAGATCGTCAAGCAGAATCTGAAGTG...GGTGACTTTCAGTTCTTGGGTGTTTATGAAGTAGGGAAAATGTTTATGTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS TCA 72 bp | CACAACAAGCTCTGGCCACCAGCTCAACCTTCAGGGTaGCGTCGCAGAGCTCCCCGTTTTCATAGAAGCCCA | + |
Preference number: 6 (lower is better) Translates to: HNKLWPPAQPSG*RRRAPRFHRSP Trigger: TGGGCTTCTATGAAAACGGGGAGCTCTGCGACGTCACCCTGAAGGTTGAGCTGGTGGCCAGAGCTTGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112815.8 |
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CDS GCA 72 bp | TTGAGGTCGCTAGAGGAGAGGAGCTTGTGGAGATGTTaGGGGGACACACTCACGAAGTCTTCGCACTCCACC | + |
Preference number: 6 (lower is better) Translates to: LRSLEERSLWRC*GDTLTKSSHST Trigger: GGTGGAGTGCGAAGACTTCGTGAGTGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAGCGACCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CCA 72 bp | CGCCACAACACCCATGAGAAAATCAACTGGCAGCAATaGCAGACGGACCTTCAGGGTGACGTCGCAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: RHNTHEKINWQQ*QTDLQGDVAEL Trigger: GAGCTCTGCGACGTCACCCTGAAGGTCCGTCTGCCATTGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112811.8 |
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CDS CAA 72 bp | GTTGAGGTCGCTAGAGGAGAGGAGCTTGTGGAGATGTaGCGGGGACACACTCACGAAGTCTTCGCACTCCAC | + |
Preference number: 6 (lower is better) Translates to: VEVARGEELVEM*RGHTHEVFALH Trigger: GTGGAGTGCGAAGACTTCGTGAGTGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAGCGACCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CCA 72 bp | CGCCACAACACCCATGAGAAAATCAACTGGCAGCAATaGCAGACGGACCTGTGCAAGTGTCTCGTCCAGCCA | + |
Preference number: 6 (lower is better) Translates to: RHNTHEKINWQQ*QTDLCKCLVQP Trigger: TGGCTGGACGAGACACTTGCACAGGTCCGTCTGCCATTGCTGCCAGTTGATTTTCTCATGGGTGTTGTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CAA 90 bp | ACCTGCTTCTCACTGTCAATGTTGAGGTCGCTAGAGGAGAGGAGCTaGTGGAGATGTTGCGGGGACACACTCACGAAGTCTTCGCACTCC | + |
Preference number: 6 (lower is better) Translates to: TCFSLSMLRSLEERS*WRCCGDTLTKSSHS Trigger: GGAGTGCGAAGACTTCGTGAGTGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAGCGACCTCAACATTGACAGTGAGAAGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS TCA 72 bp | TACTGGTCCGCCATGTCCATTAGGTCTATTCGGTTGTaGCTCTCTGCGAAGGCTCGTACAGCCAGGCAGTTG | + |
Preference number: 6 (lower is better) Translates to: YWSAMSIRSIRL*LSAKARTARQL Trigger: CAACTGCCTGGCTGTACGAGCCTTCGCAGAGAGTCACAACCGAATAGACCTAATGGACATGGCGGACCAGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS GCA 72 bp | CCTTCCCTTCCACAGAGATCACACCCACATGTCGCCTaGGGCTGTTCATTTCTGGTCCAAAGAACCAGCTGT | + |
Preference number: 6 (lower is better) Translates to: PSLPQRSHPHVA*GCSFLVQRTSC Trigger: ACAGCTGGTTCTTTGGACCAGAAATGAACAGCCGCAGGCGACATGTGGGTGTGATCTCTGTGGAAGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS CCA 72 bp | CTGTCAATGTTGAGGTCGCTAGAGGAGAGGAGCTTGTaGAGATGTTGCGGGGACACACTCACGAAGTCTTCG | + |
Preference number: 6 (lower is better) Translates to: LSMLRSLEERSL*RCCGDTLTKSS Trigger: CGAAGACTTCGTGAGTGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAGCGACCTCAACATTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CAA 90 bp | ACTGTCAATGTTGAGGTCGCTAGAGGAGAGGAGCTTGTGGAGATGTaGCGGGGACACACTCACGAAGTCTTCGCACTCCACCACTTCAGT | + |
Preference number: 6 (lower is better) Translates to: TVNVEVARGEELVEM*RGHTHEVFALHHFS Trigger: ACTGAAGTGGTGGAGTGCGAAGACTTCGTGAGTGTGTCCCCGCAACATCTCCACAAGCTCCTCTCCTCTAGCGACCTCAACATTGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CAA 90 bp | CAGACGGACCTGTGCAAGTGTCTCGTCCAGCCATTTAGGATGATGTaGCGGATTGGCAAGAAGCCACTTGATGGCAGCACTGTAGACCTG | + |
Preference number: 6 (lower is better) Translates to: QTDLCKCLVQPFRMM*RIGKKPLDGSTVDL Trigger: CAGGTCTACAGTGCTGCCATCAAGTGGCTTCTTGCCAATCCGCAACATCATCCTAAATGGCTGGACGAGACACTTGCACAGGTCCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS TCA 72 bp | CGGACCTGTGCAAGTGTCTCGTCCAGCCATTTAGGATaGTGTTGCGGATTGGCAAGAAGCCACTTGATGGCA | + |
Preference number: 6 (lower is better) Translates to: RTCASVSSSHLG*CCGLARSHLMA Trigger: TGCCATCAAGTGGCTTCTTGCCAATCCGCAACATCATCCTAAATGGCTGGACGAGACACTTGCACAGGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS GCA 72 bp | ATGTATTCACAACAAGCTCTGGCCACCAGCTCAACCTaGAGAATACACGCTGCATACAGCAGGGGCTGGACA | + |
Preference number: 6 (lower is better) Translates to: MYSQQALATSST*RIHAAYSRGWT Trigger: TGTCCAGCCCCTGCTGTATGCAGCGTGTATTCTGCAGGTTGAGCTGGTGGCCAGAGCTTGTTGTGAATACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS GCA 72 bp | CTCACGAAGTCTTCGCACTCCACCACTTCAGTAAAGTaGTCACAGGCATACTGGTCCGCCATGTCCATTAGG | + |
Preference number: 6 (lower is better) Translates to: LTKSSHSTTSVK*SQAYWSAMSIR Trigger: CCTAATGGACATGGCGGACCAGTATGCCTGTGAGCACTTTACTGAAGTGGTGGAGTGCGAAGACTTCGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS CCA 72 bp | CGGGGTCGTCCTGACTGTGTACTCAAAGTCCGGGACTaGTTTACTGCTCAAGTGAAGGTGGTAATTTCTCGC | + |
Preference number: 6 (lower is better) Translates to: RGRPDCVLKVRD*FTAQVKVVISR Trigger: GCGAGAAATTACCACCTTCACTTGAGCAGTAAACCAGTCCCGGACTTTGAGTACACAGTCAGGACGACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |
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CDS CAA 72 bp | CTGTGCAAGTGTCTCGTCCAGCCATTTAGGATGATGTaGCGGATTGGCAAGAAGCCACTTGATGGCAGCACT | + |
Preference number: 6 (lower is better) Translates to: LCKCLVQPFRMM*RIGKKPLDGST Trigger: AGTGCTGCCATCAAGTGGCTTCTTGCCAATCCGCAACATCATCCTAAATGGCTGGACGAGACACTTGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS TCA 72 bp | TGTGACAAGATATTAGCTTTGAGCCAACCTTCAGGGTaGCGTCGCAGAGCTCCCCGTTTTCATAGAAGCCCA | + |
Preference number: 6 (lower is better) Translates to: CDKILALSQPSG*RRRAPRFHRSP Trigger: TGGGCTTCTATGAAAACGGGGAGCTCTGCGACGTCACCCTGAAGGTTGGCTCAAAGCTAATATCTTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS GCA 72 bp | GAGAAAATCAACTGGCAGCAATGGCAGACGGACCTGTaGAAGTGTCTCGTCCAGCCATTTAGGATGATGTTG | + |
Preference number: 6 (lower is better) Translates to: EKINWQQWQTDL*KCLVQPFRMML Trigger: CAACATCATCCTAAATGGCTGGACGAGACACTTGCACAGGTCCGTCTGCCATTGCTGCCAGTTGATTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031254.9 ENSMUST00000112815.8 |
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CDS TCA 72 bp | CATACAGCAGGGGCTGGACATTGTCCACTGTTAAAGTaGGCCGTGAGGAGTAGACAAACTTCACCAAGTCTT | + |
Preference number: 6 (lower is better) Translates to: HTAGAGHCPLLK*AVRSRQTSPSL Trigger: AAGACTTGGTGAAGTTTGTCTACTCCTCACGGCTCACTTTAACAGTGGACAATGTCCAGCCCCTGCTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS GCA 72 bp | GCATCACCGTCAAAGTCTCGGATCTCGATTAACGCCTaGTTGGCTTCAGACATTTCGGAAAGAAACATGGCT | + |
Preference number: 6 (lower is better) Translates to: ASPSKSRISINA*LASDISERNMA Trigger: AGCCATGTTTCTTTCCGAAATGTCTGAAGCCAAGCAGGCGTTAATCGAGATCCGAGACTTTGACGGTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS CCA 72 bp | GATGAAAGTGTAGCTGCATGTATTCACAACAAGCTCTaGCCACCAGCTCAACCTGCAGAATACACGCTGCAT | + |
Preference number: 6 (lower is better) Translates to: DESVAACIHNKL*PPAQPAEYTLH Trigger: ATGCAGCGTGTATTCTGCAGGTTGAGCTGGTGGCCAGAGCTTGTTGTGAATACATGCAGCTACACTTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS CAA 72 bp | TCACCGTCAAAGTCTCGGATCTCGATTAACGCCTGCTaGGCTTCAGACATTTCGGAAAGAAACATGGCTCTG | + |
Preference number: 6 (lower is better) Translates to: SPSKSRISINAC*ASDISERNMAL Trigger: CAGAGCCATGTTTCTTTCCGAAATGTCTGAAGCCAAGCAGGCGTTAATCGAGATCCGAGACTTTGACGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031254.9 |
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CDS CCA 72 bp | GATCACACCCACATGTCGCCTGCGGCTGTTCATTTCTaGTCCAAAGAACCAGCTGTTTTTGTTGATAGAATA | + |
Preference number: 6 (lower is better) Translates to: DHTHMSPAAVHF*SKEPAVFVDRI Trigger: TATTCTATCAACAAAAACAGCTGGTTCTTTGGACCAGAAATGAACAGCCGCAGGCGACATGTGGGTGTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031254.9 ENSMUST00000112811.8 ENSMUST00000112815.8 |