Pregenerated sensors for KLHL7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028986Ensembl transcript IDs: ENSMUST00000030841.10, ENSMUST00000163409.5, ENSMUST00000200116.5
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATTGGCCTCCACCATCCCATGGCTGCAGCGCTGAGTCAGCATGCTaGGCTTCGTGTGCCAACTCTCGGTCCTTGTATCATAGCATTCAA | + |
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Preference number: 1 (lower is better) Translates to: HWPPPSHGCSAESAC*ASCANSRSLYHSIQ Trigger: TTGAATGCTATGATACAAGGACCGAGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCTGCAGCCATGGGATGGTGGAGGCCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR CCA 90 bp | CAGCAAATATCTTGTCCTTCACAAACACCAGCCCATGATTCTTCCTaGGCTCAATCATTGAACACAGCTCAGTCCATGTTTCTGTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QQISCPSQTPAHDSS*AQSLNTAQSMFLWQ Trigger: CTGCCACAGAAACATGGACTGAGCTGTGTTCAATGATTGAGCCCAGGAAGAATCATGGGCTGGTGTTTGTGAAGGACAAGATATTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR TCA 90 bp | CTTCATTTGCTCCACAAGTATCAACAACACAAATTAGACAACTTGTaGCTGGGAAAGCCCGGACTTTTGAGTTGGCGATCCACTTATCTG | + |
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Preference number: 1 (lower is better) Translates to: LHLLHKYQQHKLDNL*LGKPGLLSWRSTYL Trigger: CAGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCTAATTTGTGTTGTTGATACTTGTGGAGCAAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR TCA 90 bp | CACCCCTCCATGGCATCGGTGACACCATCTTCCATTCATTTAACTTaGTATCGTAATATTCCACATTGTCCAGACCACCTAAACCATTCT | + |
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Preference number: 1 (lower is better) Translates to: HPSMASVTPSSIHLT*YRNIPHCPDHLNHS Trigger: AGAATGGTTTAGGTGGTCTGGACAATGTGGAATATTACGATATCAAGTTAAATGAATGGAAGATGGTGTCACCGATGCCATGGAGGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR TCA 90 bp | AACTCTTGGAATAAACCACTGGTGGCCATATCTCTAAGTTTCAGATaGGTGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: NSWNKPLVAISLSFR*VEVHSPFMFQGSLH Trigger: ATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCACTCATCTGAAACTTAGAGATATGGCCACCAGTGGTTTATTCCAAGAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGAGCGCTGAGTCAGCATaGTGGGCTTCGTGTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQSAESA*WASCAN Trigger: GTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCT...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGGACATAGATGACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTCACCACAAACATAGATaGGGCCATTGGCCTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: CQDIDDRANCCTLHRDTPHHKHR*GHWPPP Trigger: TGGTGGAGGCCAATGGCCTCATCTATGTTTGTGGTG...AGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR CAA 90 bp | AGCGCTGAGTCAGCATGCTGGGCTTCGTGTGCCAACTCTCGGTCCTaGTATCATAGCATTCAAACAAATACAGGGCCGAGTTTCCCGGAA | + |
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Preference number: 2 (lower is better) Translates to: SAESACWASCANSRS*YHSIQTNTGPSFPE Trigger: TTCCGGGAAACTCGGCCCTGTATTTGTTTGAATGCTATGATACAAGGACCGAGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR CCA 90 bp | GGATCATACACTTCACAGGAACTAAGCACTCTCCCAGAAACATTGTTTCCTAAGGCTGAGTCAGCATGCTaGGCTTCGTGTGCCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: GSYTSQELSTLPETLFPKAESAC*ASCANS Trigger: AGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGC...CTTAGGAAACAATGTTTCTGGGAGAGTGCTTAGTTCCTGTGAAGTGTATGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR CAA 90 bp | TGTCCTTCACAAACACCAGCCCATGATTCTTCCTGGGCTCAATCATaGAACACAGCTCAGTCCATGTTTCTGTGGCAGGATCATACACTT | + |
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Preference number: 2 (lower is better) Translates to: CPSQTPAHDSSWAQS*NTAQSMFLWQDHTL Trigger: AAGTGTATGATCCTGCCACAGAAACATGGACTGAGCTGTGTTCAATGATTGAGCCCAGGAAGAATCATGGGCTGGTGTTTGTGAAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACACCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: EFTISDYNSYDYLVLDQTPWLQR*VSMLGF Trigger: GAAGCCCAGCATGCTGACTCAGCGCTGCAGCCATGG...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAACTTGTGACTGGGAAAGCCCGGACTTTTGAGTTGGCGATCCACTTATCTAATCTAGAGCTAAGCTaGGGCTCTTTCTCTGATGAG | + |
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Preference number: 2 (lower is better) Translates to: RQLVTGKARTFELAIHLSNLELS*GSFSDE Trigger: CTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT...AGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | ACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAACTGCCAGGACATAGATaGCAGAGCCAACTGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: TIHVSRVSSFAPQVSTTQLPGHR*QSQLLH Trigger: GTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCAG...TTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | ACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAGACAGAGCCAACTGCTaGACACTTCACCGTGACACC | + |
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Preference number: 2 (lower is better) Translates to: TIHVSRVSSFAPQVSTTQDRANC*TLHRDT Trigger: GGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTC...TTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACACCCTGAAAACCGGATATGCCCCAATCTaGCTACACCCTGAAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: CFSIILKDMPQSAYTLKTGYAPI*LHPENL Trigger: CAGGTTTTCAGGGTGTAGGCAGATTGGGGCATATCC...GGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCCCACCATCCCATGGCTaGAGCGCTGAGTCAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: KGKTLLRKINRPFGNLLSPPSHG*SAESAC Trigger: GCATGCTGACTCAGCGCTGCAGCCATGGGATGGTGG...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCACCACCTAAACCATTCTaGCCACCGACAGCAAATATC | + |
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Preference number: 2 (lower is better) Translates to: FSDEHAPLCHNQLYICNSPPKPF*PPTANI Trigger: GATATTTGCTGTCGGTGGTCAGAATGGTTTAGGTGG...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGATGAGTGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGGATATGCCCCAATCTaGCTACACCCTGAAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: FQMSGSPFTIHVSRVSSFGYAPI*LHPENL Trigger: CAGGTTTTCAGGGTGTAGGCAGATTGGGGCATATCC...AAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCACTCATCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCAAAATTAGACAACTTGTaGCTGGGAAAGCCCGGACTT | + |
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Preference number: 2 (lower is better) Translates to: FSDEHAPLCHNQLYICNSKLDNL*LGKPGL Trigger: AAGTCCGGGCTTTCCCAGTCACAAGTTGTCTAATTT...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAACCTGGGCTCAATCATTaGACACAGCTCAGTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: LVLDQTETKSPNYTALTQPGLNH*TQLSPC Trigger: ACATGGACTGAGCTGTGTTCAATGATTGAGCCCAGG...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR CAA 90 bp | ACACAAATTAGACAACTTGTGACTGGGAAAGCCCGGACTTTTGAGTaGGCGATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGC | + |
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Preference number: 2 (lower is better) Translates to: TQIRQLVTGKARTFE*AIHLSVSVLYSRIC Trigger: GCATATCCTTGAGTATAATACTGAAACAGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCTAATTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | CCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAAAAATTAGACAACTTGTaGCTGGGAAAGCCCGGACTT | + |
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Preference number: 2 (lower is better) Translates to: PFMFQGSLHLLHKYQQHKKLDNL*LGKPGL Trigger: AAGTCCGGGCTTTCCCAGTCACAAGTTGTCTAATTT...TTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAACAAACACCAGCCCATaGTTCTTCCTGGGCTCAATC | + |
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Preference number: 2 (lower is better) Translates to: EFTISDYNSYDYLVLDQTTNTSP*FFLGSI Trigger: GATTGAGCCCAGGAAGAATCATGGGCTGGTGTTTGT...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGAATCTAGAGCTAAGCTaGGGCTCTTTCTCTGATGAG | + |
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Preference number: 2 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMNLELS*GSFSDE Trigger: CTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAAAGGGTCTCTTCATTTaGTCCACAAGTATCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: EFTISDYNSYDYLVLDQTKGLFI*STSINN Trigger: GTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTT...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCAAGGGTCTCTTCATTTaGTCCACAAGTATCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: KGKTLLRKINRPFGNLLSKGLFI*STSINN Trigger: GTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTT...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCCAGCTTTTCTTCTGTTaGTCAATCGTTCCTACTGAT | + |
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Preference number: 2 (lower is better) Translates to: KGKTLLRKINRPFGNLLSQLFFC*SIVPTD Trigger: ATCAGTAGGAACGATTGACCAACAGAAGAAAAGCTG...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR CCA 72 bp | CCACCATCCCATGGCTGCAGCGCTGAGTCAGCATGCTaGGCTTCGTGTGCCAACTCTCGGTCCTTGTATCAT | + |
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Preference number: 3 (lower is better) Translates to: PPSHGCSAESAC*ASCANSRSLYH Trigger: ATGATACAAGGACCGAGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCTGCAGCCATGGGATGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR GCA 72 bp | AAAACCTGCCAGGACATAGATGACAGAGCCAACTGCTaGACACTTCACCGTGACACCCCTCCATGGCATCGG | + |
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Preference number: 3 (lower is better) Translates to: KTCQDIDDRANC*TLHRDTPPWHR Trigger: CCGATGCCATGGAGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCAGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGACTCTCCCAGAAACATaGTTTCCTAAGCTTCCACCA | + |
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Preference number: 3 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQTLPET*FPKLPP Trigger: TGGTGGAAGCTTAGGAAACAATGTTTCTGGGAGAGT...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR TCA 72 bp | CTCCACAAGTATCAACAACACAAATTAGACAACTTGTaGCTGGGAAAGCCCGGACTTTTGAGTTGGCGATCC | + |
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Preference number: 3 (lower is better) Translates to: LHKYQQHKLDNL*LGKPGLLSWRS Trigger: GGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCTAATTTGTGTTGTTGATACTTGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | AGTTGGCGATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGCCCCAATCTCCTGGGCTCAATCATaGAACACAGCTCAGTCCATG | + |
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Preference number: 3 (lower is better) Translates to: SWRSTYLFQYYTQGYAPISWAQS*NTAQSM Trigger: CATGGACTGAGCTGTGTTCAATGATTGAGCCCAGGA...GATTGGGGCATATCCTTGAGTATAATACTGAAACAGATAAGTGGATCGCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACACCCTGAAAACCCAAGGGTCTCTTCATTaGCTCCACAAGTATCAACAA | + |
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Preference number: 3 (lower is better) Translates to: CFSIILKDMPQSAYTLKTQGSLH*LHKYQQ Trigger: TTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTG...GGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR TCA 72 bp | AATAAACCACTGGTGGCCATATCTCTAAGTTTCAGATaGGTGGAAGTCCATTCACCATTCATGTTTCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: NKPLVAISLSFR*VEVHSPFMFQG Trigger: CCCTTGAAACATGAATGGTGAATGGACTTCCACTCATCTGAAACTTAGAGATATGGCCACCAGTGGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | AGTTGGCGATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGCCCCAATCCAAGGGTCTCTTCATTaGCTCCACAAGTATCAACAA | + |
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Preference number: 3 (lower is better) Translates to: SWRSTYLFQYYTQGYAPIQGSLH*LHKYQQ Trigger: TTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTG...GATTGGGGCATATCCTTGAGTATAATACTGAAACAGATAAGTGGATCGCCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | ACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAGCCAACTCTCGGTCCTaGTATCATAGCATTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: TIHVSRVSSFAPQVSTTQANSRS*YHSIQT Trigger: TGTTTGAATGCTATGATACAAGGACCGAGAGTTGGC...TTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR TCA 72 bp | ATGGCATCGGTGACACCATCTTCCATTCATTTAACTTaGTATCGTAATATTCCACATTGTCCAGACCACCTA | + |
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Preference number: 3 (lower is better) Translates to: MASVTPSSIHLT*YRNIPHCPDHL Trigger: TAGGTGGTCTGGACAATGTGGAATATTACGATATCAAGTTAAATGAATGGAAGATGGTGTCACCGATGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGCTGGCTGATAGGTTCTaGGATGGCCAAATAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMLADRF*DGQIKY Trigger: ATATTTTATTTGGCCATCCAAGAACCTATCAGCCAG...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGATGAGTGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTCTGGCTGATAGGTTCTaGGATGGCCAAATAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: FQMSGSPFTIHVSRVSSFLADRF*DGQIKY Trigger: ATATTTTATTTGGCCATCCAAGAACCTATCAGCCAG...AAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCACTCATCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| 3UTR GCA 72 bp | GAGCATGCCCCACTCTGCCACAATCAGTTATATATTTaGAATTCACGTTTTCAAGAAGTGCTTGTAACTTTT | + |
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Preference number: 3 (lower is better) Translates to: EHAPLCHNQLYI*NSRFQEVLVTF Trigger: AAAAGTTACAAGCACTTCTTGAAAACGTGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR TCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGCCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQPWLQR*VSMLGF Trigger: GAAGCCCAGCATGCTGACTCAGCGCTGCAGCCATGG...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
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| CDS-3UTR GCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGCCACCATCCCATGGCTaGAGCGCTGAGTCAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQPPSHG*SAESAC Trigger: GCATGCTGACTCAGCGCTGCAGCCATGGGATGGTGG...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
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| CDS-3UTR CCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACACCCCGCCAGCAGCTTaGCTTCTTCGCGAGCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHTPPAA*LLREPQ Trigger: TTGCGGCTCGCGAAGAAGCCAAGCTGCTGGCGGGGT...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGGCTGAGTCAGCATGCTaGGCTTCGTGTGCCAACTCT | + |
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Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQAESAC*ASCANS Trigger: AGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGC...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
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| CDS-3UTR GCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAGGCCGTGTGCCACCTaGAAGTTCTTCTCGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHRPCAT*KFFSIL Trigger: GAGGATCGAGAAGAACTTGCAGGTGGCACACGGCCT...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CCA 90 bp | ACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTCCATGGCATCGGTGACGGGATCTTTCTTTCCTaGACAGTGAGGATCACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEPTAAHFTVTPLHGIGDGIFLS*TVRITS Trigger: TGACGTGATCCTCACTGTCCAGGAAAGAAAGATCCC...GTCACCGATGCCATGGAGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGGCTGTCTCGAGGTGTTaGAGGGCCCAGTTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQAVSRC*RAQFGI Trigger: TATTCCAAACTGGGCCCTCCAACACCTCGAGACAGC...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | AAAACCTGCCAGGACATAGATGACAGAGCCAACTGCTGCACACTTCACCGTGACTCAGGGTGTCCTGGCTaGGAAGATGTGTCACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTCQDIDDRANCCTLHRDSGCPG*EDVSLA Trigger: AGCGAGTGACACATCTTCTCAGCCAGGACACCCTGA...GTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGACAAACACCAGCCCATaGTTCTTCCTGGGCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQTNTSP*FFLGSI Trigger: GATTGAGCCCAGGAAGAATCATGGGCTGGTGTTTGT...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGCCTCCATGGCATCGGTaGCACCATCTTCCATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQPPWHR*HHLPFI Trigger: AATGAATGGAAGATGGTGTCACCGATGCCATGGAGG...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR GCA 90 bp | AAAACCTGCCAGGACATAGATGACAGAGCCAACTGCTGCACACTTCACCGTGACAAAGAAGTGACTGGCTaGAGCCAGGACAACGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTCQDIDDRANCCTLHRDKEVTG*SQDNAV Trigger: CACCGCGTTGTCCTGGCTGCAGCCAGTCACTTCTTT...GTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTCCATGGCATCGGTGACCAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TEPTAAHFTVTPLHGIGDQVQHL*VLLQRT Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...GTCACCGATGCCATGGAGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGCCACCTAAACCATTCTaGCCACCGACAGCAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQPPKPF*PPTANI Trigger: GATATTTGCTGTCGGTGGTCAGAATGGTTTAGGTGG...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR GCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATTTTGCCTTCTGCTaGACAGGCAGCAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHNFAFC*TGSKAV Trigger: GACAGCCTTGCTGCCTGTGCAGCAGAAGGCAAAATT...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTCCACCATCCCATGGCTaGAGCGCTGAGTCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GALSLMSMPHSATISYIFPPSHG*SAESAC Trigger: GCATGCTGACTCAGCGCTGCAGCCATGGGATGGTGG...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR CCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACACAGTCAGGGTGTCCTaGCTGAGAAGATGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHTVRVS*LRRCVT Trigger: AGTGACACATCTTCTCAGCCAGGACACCCTGACTGT...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACACCCTGAAAACCCCATGGCTGCAGCGCTaGGTCAGCATGCTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFSIILKDMPQSAYTLKTPWLQR*VSMLGF Trigger: GAAGCCCAGCATGCTGACTCAGCGCTGCAGCCATGG...GGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163409.5 |
||
| CDS-3UTR GCA 90 bp | AGACAACTTGTGACTGGGAAAGCCCGGACTTTTGAGTTGGCGATCCACTTATCTAAAGAAGTGACTGGCTaGAGCCAGGACAACGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQLVTGKARTFELAIHLSKEVTG*SQDNAV Trigger: CACCGCGTTGTCCTGGCTGCAGCCAGTCACTTCTTT...AGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTACCCCGCCAGCAGCTTaGCTTCTTCGCGAGCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WKSIHHSCFKGLFICSTSTPPAA*LLREPQ Trigger: TTGCGGCTCGCGAAGAAGCCAAGCTGCTGGCGGGGT...ACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACGATATCAACCATGAATaGCTGGCGGTTAGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHDINHE*LAVRLI Trigger: GATGAGCCTAACCGCCAGCCATTCATGGTTGATATC...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTCCATGGCATCGGTGACCCAAAACACACATGCTaGATCTCTTCGTTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEPTAAHFTVTPLHGIGDPKHTC*ISSFFK Trigger: TTTGAAAAACGAAGAGATGCAGCATGTGTGTTTTGG...GTCACCGATGCCATGGAGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GGTCCTTGTATCATAGCATTCAAACAAATACAGGGCCGAGTTTCCCGGAACCTGCTACAGGACTGTGGTTaGGAGCCTCCAAACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPCIIAFKQIQGRVSRNLLQDCG*EPPNRA Trigger: AGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAG...CAGGTTCCGGGAAACTCGGCCCTGTATTTGTTTGAATGCTATGATACAAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGCGAGTTTCCTACTTCTaGACCTCCAGATGTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQRVSYF*TSRCIN Trigger: ATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCG...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR GCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACCGCTTGACATCAAGCTaGAGGAATTCATCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHRLTSS*RNSSVL Trigger: CAAAACAGATGAATTCCTGCAGCTTGATGTCAAGCG...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | CTACACAGCACTTACACAATTAGGAAAATAGAATCTAGAGCTAAGCTGGGGCTCAGCGCTGAGTCAGCATaGTGGGCTTCGTGTGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHSTYTIRKIESRAKLGLSAESA*WASCAN Trigger: GTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCT...GAGCCCCAGCTTAGCTCTAGATTCTATTTTCCTAATTGTGTAAGTGCTGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGAAGGGTCTCTTCATTTaGTCCACAAGTATCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQKGLFI*STSINN Trigger: GTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTT...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR CCA 90 bp | TTTCAGATGAGTGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTACCCCGCCAGCAGCTTaGCTTCTTCGCGAGCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQMSGSPFTIHVSRVSSFTPPAA*LLREPQ Trigger: TTGCGGCTCGCGAAGAAGCCAAGCTGCTGGCGGGGT...AAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCACTCATCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| 3UTR CAA 72 bp | CAAACACCAGCCCATGATTCTTCCTGGGCTCAATCATaGAACACAGCTCAGTCCATGTTTCTGTGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTPAHDSSWAQS*NTAQSMFLWQD Trigger: ATCCTGCCACAGAAACATGGACTGAGCTGTGTTCAATGATTGAGCCCAGGAAGAATCATGGGCTGGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTTTCTTTCCTGGACAGTaGGGATCACGTCACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GALSLMSMPHSATISYIFFFPGQ*GSRHTV Trigger: CACTGTGTGACGTGATCCTCACTGTCCAGGAAAGAA...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACGGTTCAATCTGGTACTaGTTTGCTGCATCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHGSIWY*FAASNK Trigger: TTTGTTAGATGCAGCAAATCAGTACCAGATTGAACC...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | CTACACAGCACTTACACAATTAGGAAAATAGAATCTAGAGCTAAGCTGGGGCTCTCAGGGTGTCCTGGCTaGGAAGATGTGTCACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSTYTIRKIESRAKLGLSGCPG*EDVSLA Trigger: AGCGAGTGACACATCTTCTCAGCCAGGACACCCTGA...GAGCCCCAGCTTAGCTCTAGATTCTATTTTCCTAATTGTGTAAGTGCTGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACCGAGTTTCCTACTTCTaGACCTCCAGATGTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLELSWGSFSDEHAPLCHRVSYF*TSRCIN Trigger: ATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCG...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACACCCTGAAAACCAGGCCGTGTGCCACCTaGAAGTTCTTCTCGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFSIILKDMPQSAYTLKTRPCAT*KFFSIL Trigger: GAGGATCGAGAAGAACTTGCAGGTGGCACACGGCCT...GGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTACAGTCAGGGTGTCCTaGCTGAGAAGATGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GALSLMSMPHSATISYIFTVRVS*LRRCVT Trigger: AGTGACACATCTTCTCAGCCAGGACACCCTGACTGT...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCACTGCCAGGACATAGATaGCAGAGCCAACTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSDEHAPLCHNQLYICNSLPGHR*QSQLLH Trigger: GTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCAG...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR GCA 90 bp | TTTCAGATGAGTGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTAGCGCTGAGTCAGCATaGTGGGCTTCGTGTGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQMSGSPFTIHVSRVSSFSAESA*WASCAN Trigger: GTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCT...AAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCACTCATCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163409.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGCCAACTGTAATCCTTTaGGTTAAAATATCTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQPTVIL*VKISTG Trigger: TCCTGTAGATATTTTAACCCAAAGGATTACAGTTGG...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGACATAGATGACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTCCAACTGTAATCCTTTaGGTTAAAATATCTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQDIDDRANCCTLHRDTPPTVIL*VKISTG Trigger: TCCTGTAGATATTTTAACCCAAAGGATTACAGTTGG...AGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | AGACAACTTGTGACTGGGAAAGCCCGGACTTTTGAGTTGGCGATCCACTTATCTCAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RQLVTGKARTFELAIHLSQVQHL*VLLQRT Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...AGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGTCAGGGTGTCCTGGCTaGGAAGATGTGTCACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMSGCPG*EDVSLA Trigger: AGCGAGTGACACATCTTCTCAGCCAGGACACCCTGA...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | CTACACAGCACTTACACAATTAGGAAAATAGAATCTAGAGCTAAGCTGGGGCTCATAAACCTGGTCCTCTaGTCTCACAGTCAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHSTYTIRKIESRAKLGLINLVL*SHSQGV Trigger: GACACCCTGACTGTGAGAGCAGAGGACCAGGTTTAT...GAGCCCCAGCTTAGCTCTAGATTCTATTTTCCTAATTGTGTAAGTGCTGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTTGGAGGGCCCAGTTTaGAATACCAGCTATCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WGSFSDEHAPLCHNQLYILEGPV*NTSYPL Trigger: TAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAA...AATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGGCTGAGTCAGCATGCTaGGCTTCGTGTGCCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMAESAC*ASCANS Trigger: AGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGC...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR TCA 90 bp | AGTTGGCGATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGCCCCAATCTTCTTTCCTGGACAGTaGGGATCACGTCACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWRSTYLFQYYTQGYAPIFFPGQ*GSRHTV Trigger: CACTGTGTGACGTGATCCTCACTGTCCAGGAAAGAA...GATTGGGGCATATCCTTGAGTATAATACTGAAACAGATAAGTGGATCGCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | AGACAACTTGTGACTGGGAAAGCCCGGACTTTTGAGTTGGCGATCCACTTATCTGGTTCAATCTGGTACTaGTTTGCTGCATCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQLVTGKARTFELAIHLSGSIWY*FAASNK Trigger: TTTGTTAGATGCAGCAAATCAGTACCAGATTGAACC...AGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGCACCACAAACATAGATaGGGCCATTGGCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMHHKHR*GHWPPP Trigger: TGGTGGAGGCCAATGGCCTCATCTATGTTTGTGGTG...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAAAGGCCGTGTGCCACCTaGAAGTTCTTCTCGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQRPCAT*KFFSIL Trigger: GAGGATCGAGAAGAACTTGCAGGTGGCACACGGCCT...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGTCCCAAAACACACATaGTGCATCTCTTCGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALSLMSMPHSATISYIFVPKHT*CISSFF Trigger: GAAAAACGAAGAGATGCAGCATGTGTGTTTTGGGAC...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCAAATTTTGCCTTCTGCTaGACAGGCAGCAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSDEHAPLCHNQLYICNSNFAFC*TGSKAV Trigger: GACAGCCTTGCTGCCTGTGCAGCAGAAGGCAAAATT...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTAATCCATTCGCTTTATaGGGAAAAGCTGAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GALSLMSMPHSATISYIFNPFAL*GKAENL Trigger: GAGGTTCTCAGCTTTTCCCCATAAAGCGAATGGATT...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTCAGACCACGTTTCTGTaGCAGGATCATACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKSIHHSCFKGLFICSTSQTTFL*QDHTLH Trigger: GTGAAGTGTATGATCCTGCCACAGAAACGTGGTCTG...ACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163409.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAACACCACAAACATAGATaGGGCCATTGGCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQHHKHR*GHWPPP Trigger: TGGTGGAGGCCAATGGCCTCATCTATGTTTGTGGTG...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCAAAGAAGTGACTGGCTaGAGCCAGGACAACGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGKTLLRKINRPFGNLLSKEVTG*SQDNAV Trigger: CACCGCGTTGTCCTGGCTGCAGCCAGTCACTTCTTT...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | ATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACAATAAACCTGGTCCTCTaGTCTCACAGTCAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IHLSVSVLYSRICPNLPTINLVL*SHSQGV Trigger: GACACCCTGACTGTGAGAGCAGAGGACCAGGTTTAT...TGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACAGATAAGTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTCTCCAAACAGAGCTATaGGGTAATCATGTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALSLMSMPHSATISYIFLQTEL*GNHVSF Trigger: GAAAGAAACATGATTACCGCATAGCTCTGTTTGGAG...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTCTCCAAACAGAGCTATaGGGTAATCATGTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSFSDEHAPLCHNQLYILQTEL*GNHVSF Trigger: GAAAGAAACATGATTACCGCATAGCTCTGTTTGGAG...AATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAGACAGAGCCAACTGCTaGACACTTCACCGTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTDRANC*TLHRDT Trigger: GGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTC...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR CCA 90 bp | AAGGATATGCCCCAATCTGCCTACACCCTGAAAACCTGCCAGGACATAGATGACCCAACTGTAATCCTTTaGGTTAAAATATCTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDMPQSAYTLKTCQDIDDPTVIL*VKISTG Trigger: TCCTGTAGATATTTTAACCCAAAGGATTACAGTTGG...GTCATCTATGTCCTGGCAGGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAAGCTGTCTCGAGGTGTTaGAGGGCCCAGTTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQAVSRC*RAQFGI Trigger: TATTCCAAACTGGGCCCTCCAACACCTCGAGACAGC...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTCATTCAGGATTATCTTaGATAAGTGGTTCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGSFSDEHAPLCHNQLYIHSGLS*ISGSAC Trigger: ACAAGCTGAACCACTTATTCAAGATAATCCTGAATG...AATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCAACAGTCCAGACACTCTaGAAGCACACTTATACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSDEHAPLCHNQLYICNSTVQTL*KHTYTK Trigger: CTTGGTATAAGTGTGCTTGCAGAGTGTCTGGACTGT...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | CTACACAGCACTTACACAATTAGGAAAATAGAATCTAGAGCTAAGCTGGGGCTCCGCTTGACATCAAGCTaGAGGAATTCATCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSTYTIRKIESRAKLGLRLTSS*RNSSVL Trigger: CAAAACAGATGAATTCCTGCAGCTTGATGTCAAGCG...GAGCCCCAGCTTAGCTCTAGATTCTATTTTCCTAATTGTGTAAGTGCTGTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTGTCCCAAAACACACATaGTGCATCTCTTCGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKSIHHSCFKGLFICSTSVPKHT*CISSFF Trigger: GAAAAACGAAGAGATGCAGCATGTGTGTTTTGGGAC...ACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAAAATTTTGCCTTCTGCTaGACAGGCAGCAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQNFAFC*TGSKAV Trigger: GACAGCCTTGCTGCCTGTGCAGCAGAAGGCAAAATT...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGGGGATCTTTCTTTCCTaGACAGTGAGGATCACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMGIFLS*TVRITS Trigger: TGACGTGATCCTCACTGTCCAGGAAAGAAAGATCCC...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | CCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAAGATATCAACCATGAATaGCTGGCGGTTAGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PFMFQGSLHLLHKYQQHKDINHE*LAVRLI Trigger: GATGAGCCTAACCGCCAGCCATTCATGGTTGATATC...TTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCCTACAGGACTGTGGTTaGGAGCCTCCAAACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGKTLLRKINRPFGNLLSLQDCG*EPPNRA Trigger: AGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAG...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACACTACAGGACTGTGGTTaGGAGCCTCCAAACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTLQDCG*EPPNRA Trigger: AGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAG...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACACCCTGAAAACCAATCCATTCGCTTTATaGGGAAAAGCTGAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFSIILKDMPQSAYTLKTNPFAL*GKAENL Trigger: GAGGTTCTCAGCTTTTCCCCATAAAGCGAATGGATT...GGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCATTGGAGGGCCCAGTTTaGAATACCAGCTATCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPFTIHVSRVSSFAPQVSLEGPV*NTSYPL Trigger: TAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAA...TGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTGCTGTCTCGAGGTGTTaGAGGGCCCAGTTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IHVSRVSSFAPQVSTTQIAVSRC*RAQFGI Trigger: TATTCCAAACTGGGCCCTCCAACACCTCGAGACAGC...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGTTTATAAACCTGGTCCTCTaGTCTCACAGTCAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTVKSQKSEKFCEKVCMFINLVL*SHSQGV Trigger: GACACCCTGACTGTGAGAGCAGAGGACCAGGTTTAT...AAACATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCACAGATGTATAAATTTTaGCTTCTGCTGCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFTIHVSRVSSFAPQVSQMYKF*LLLHRQ Trigger: CTGCCTGTGCAGCAGAAGGCAAAATTTATACATCTG...TGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAGGATATGCCCCAATCTaGCTACACCCTGAAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTGYAPI*LHPENL Trigger: CAGGTTTTCAGGGTGTAGGCAGATTGGGGCATATCC...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAACAGTCAGGGTGTCCTaGCTGAGAAGATGTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTTVRVS*LRRCVT Trigger: AGTGACACATCTTCTCAGCCAGGACACCCTGACTGT...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAAGATATCAACCATGAATaGCTGGCGGTTAGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQDINHE*LAVRLI Trigger: GATGAGCCTAACCGCCAGCCATTCATGGTTGATATC...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | CCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATCAGGAGACAGCAGATaGTACCTCATTCCACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PFMFQGSLHLLHKYQQHKSGDSR*YLIPLI Trigger: GATAAGTGGAATGAGGTACCATCTGCTGTCTCCTGA...TTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAGTATTATACTCAAGGATATGCCCCAATCTGCCTACACCCTGAAAACCCATTCAGGATTATCTTaGATAAGTGGTTCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFSIILKDMPQSAYTLKTHSGLS*ISGSAC Trigger: ACAAGCTGAACCACTTATTCAAGATAATCCTGAATG...GGTTTTCAGGGTGTAGGCAGATTGGGGCATATCCTTGAGTATAATACTGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAAACAGTCCAGACACTCTaGAAGCACACTTATACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQTVQTL*KHTYTK Trigger: CTTGGTATAAGTGTGCTTGCAGAGTGTCTGGACTGT...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCACTCCAAACAGAGCTATaGGGTAATCATGTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSDEHAPLCHNQLYICNSLQTEL*GNHVSF Trigger: GAAAGAAACATGATTACCGCATAGCTCTGTTTGGAG...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGCAGATGTATAAATTTTaGCTTCTGCTGCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMQMYKF*LLLHRQ Trigger: CTGCCTGTGCAGCAGAAGGCAAAATTTATACATCTG...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAATCAGGAGACAGCAGATaGTACCTCATTCCACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQSGDSR*YLIPLI Trigger: GATAAGTGGAATGAGGTACCATCTGCTGTCTCCTGA...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCATATCTACAGGACTGTaGTTGGGAGCCTCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGKTLLRKINRPFGNLLSISTGL*LGASKQ Trigger: CTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATAT...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGTTTATATCTACAGGACTGTaGTTGGGAGCCTCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVKSQKSEKFCEKVCMFISTGL*LGASKQ Trigger: CTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATAT...AAACATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTATATCTACAGGACTGTaGTTGGGAGCCTCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IHVSRVSSFAPQVSTTQIISTGL*LGASKQ Trigger: CTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATAT...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAACAGGTTCAGCATCTTTaGGTTCTACTTCAAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQQVQHL*VLLQRT Trigger: AGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTG...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | AGTTGGCGATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGCCCCAATCCATTCAGGATTATCTTaGATAAGTGGTTCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SWRSTYLFQYYTQGYAPIHSGLS*ISGSAC Trigger: ACAAGCTGAACCACTTATTCAAGATAATCCTGAATG...GATTGGGGCATATCCTTGAGTATAATACTGAAACAGATAAGTGGATCGCCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCTTGACCAAACAGAAACAAAAAGCCCTAACTACACAGCACTTACACAACAGATGTATAAATTTTaGCTTCTGCTGCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLDQTETKSPNYTALTQQMYKF*LLLHRQ Trigger: CTGCCTGTGCAGCAGAAGGCAAAATTTATACATCTG...TTGTGTAAGTGCTGTGTAGTTAGGGCTTTTTGTTTCTGTTTGGTCAAGAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTTCAGGAGACAGCAGATaGTACCTCATTCCACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: IHVSRVSSFAPQVSTTQISGDSR*YLIPLI Trigger: GATAAGTGGAATGAGGTACCATCTGCTGTCTCCTGA...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCTTGGAGGGCCCAGTTTaGAATACCAGCTATCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGKTLLRKINRPFGNLLSLEGPV*NTSYPL Trigger: TAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAA...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCCAGTCCATGTTTCTGTaGCAGGATCATACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGKTLLRKINRPFGNLLSQSMFL*QDHTLH Trigger: GTGAAGTGTATGATCCTGCCACAGAAACATGGACTG...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTGTCCCAAAACACACATaGTGCATCTCTTCGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHVSRVSSFAPQVSTTQIVPKHT*CISSFF Trigger: GAAAAACGAAGAGATGCAGCATGTGTGTTTTGGGAC...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAAATCCATTCGCTTTATaGGGAAAAGCTGAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTNPFAL*GKAENL Trigger: GAGGTTCTCAGCTTTTCCCCATAAAGCGAATGGATT...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAGGTTCAATCTGGTACTaGTTTGCTGCATCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTGSIWY*FAASNK Trigger: TTTGTTAGATGCAGCAAATCAGTACCAGATTGAACC...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACACCAAAACACACATGCTaGATCTCTTCGTTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFTISDYNSYDYLVLDQTPKHTC*ISSFFK Trigger: TTTGAAAAACGAAGAGATGCAGCATGTGTGTTTTGG...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS TCA 90 bp | CAGCCAGGACAACGCGGTGAGCGGGGATCTTTCTTTCCTGGACAGTaGGGATCACGTCACACAGTGTTCTCTGTTTCCTCATGTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGQRGERGSFFPGQ*GSRHTVFSVSSCCS Trigger: TGAACAACATGAGGAAACAGAGAACACTGTGTGACGTGATCCTCACTGTCCAGGAAAGAAAGATCCCCGCTCACCGCGTTGTCCTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGACATAGATGACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTCTCTGTTTCCTCATGTaGTTCATGACGCCCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CQDIDDRANCCTLHRDTPLCFLM*FMTPMN Trigger: GTTCATGGGCGTCATGAACAACATGAGGAAACAGAG...AGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | CGGTCCTTGTATCATAGCATTCAAACAAATACAGGGCCGAGTTTCCCGGAACCTGGCTGTCTCGAGGTGTaGGAGGGCCCAGTTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSLYHSIQTNTGPSFPEPGCLEV*EGPVWN Trigger: ATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCC...AGGTTCCGGGAAACTCGGCCCTGTATTTGTTTGAATGCTATGATACAAGGACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | AATCTAGAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACTCCTGGGCTCAATCATaGAACACAGCTCAGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NLELSWGSFSDEHAPLCHSWAQS*NTAQSM Trigger: CATGGACTGAGCTGTGTTCAATGATTGAGCCCAGGA...GTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTCTAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS-3UTR CAA 90 bp | AGACAACTTGTGACTGGGAAAGCCCGGACTTTTGAGTTGGCGATCCACTTATCTTCTACAGGACTGTGGTaGGGAGCCTCCAAACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLVTGKARTFELAIHLSSTGLW*GASKQS Trigger: GCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGA...AGATAAGTGGATCGCCAACTCAAAAGTCCGGGCTTTCCCAGTCACAAGTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | TGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTGGCTGTCTCGAGGTGTaGGAGGGCCCAGTTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WGSFSDEHAPLCHNQLYIGCLEV*EGPVWN Trigger: ATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCC...AATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQSGSAS*SSTSKD Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS CCA 90 bp | AATTTTGCCTTCTGCTGCACAGGCAGCAAGGCTGTCTCGAGGTGTTaGAGGGCCCAGTTTGGAATACCAGCTATCCTTTACAACATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NFAFCCTGSKAVSRC*RAQFGIPAILYNIV Trigger: TACAATGTTGTAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCCTTGCTGCCTGTGCAGCAGAAGGCAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGACATAGATGACAGAGCCAACTGCTGCACACTTCACCGTGACACCCCTGCATTCAGGATTATCTaGAATAAGTGGTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CQDIDDRANCCTLHRDTPAFRII*NKWFSL Trigger: CAAGCTGAACCACTTATTCAAGATAATCCTGAATGC...AGGGGTGTCACGGTGAAGTGTGCAGCAGTTGGCTCTGTCATCTATGTCCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | GAGCTAAGCTGGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELSWGSFSDEHAPLCHNQSKFHQ*FNNIRF Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...CTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCCAGCTTAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 90 bp | ATAAGAGGAAACCTGACTTTAGCAAGGATATCAACCATGAATGGCTaGCGGTTAGGCTCATCATATTTCAACCACCTCACGGCAGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRGNLTLARISTMNG*RLGSSYFNHLTAAS Trigger: TGACGCTGCCGTGAGGTGGTTGAAATATGATGAGCCTAACCGCCAGCCATTCATGGTTGATATCCTTGCTAAAGTCAGGTTTCCTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 90 bp | CGATATAAGAGGAAACCTGACTTTAGCAAGGATATCAACCATGAATaGCTGGCGGTTAGGCTCATCATATTTCAACCACCTCACGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RYKRKPDFSKDINHE*LAVRLIIFQPPHGS Trigger: GCTGCCGTGAGGTGGTTGAAATATGATGAGCCTAACCGCCAGCCATTCATGGTTGATATCCTTGCTAAAGTCAGGTTTCCTCTTATATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCGGCTGTCTCGAGGTGTaGGAGGGCCCAGTTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KGKTLLRKINRPFGNLLSGCLEV*EGPVWN Trigger: ATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCC...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCTTTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTCAAGGGTCTCTTCATTaGCTCCACAAGTATCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: GALSLMSMPHSATISYIFQGSLH*LHKYQQ Trigger: TTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTG...AAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAAAGAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030841.10 |
||
| CDS CCA 90 bp | GTCTGTCCAACTGTAATCCTTTGGGTTAAAATATCTACAGGACTGTaGTTGGGAGCCTCCAAACAGAGCTATGCGGTAATCATGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCPTVILWVKISTGL*LGASKQSYAVIMFL Trigger: AAGAAACATGATTACCGCATAGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATATTTTAACCCAAAGGATTACAGTTGGACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | AGTTGGCGATCCACTTATCTGTTTCAGTATTATACTCAAGGATATGCCCCAATCCTCTGTTTCCTCATGTaGTTCATGACGCCCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SWRSTYLFQYYTQGYAPILCFLM*FMTPMN Trigger: GTTCATGGGCGTCATGAACAACATGAGGAAACAGAG...GATTGGGGCATATCCTTGAGTATAATACTGAAACAGATAAGTGGATCGCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCTCTACAGGACTGTGGTaGGGAGCCTCCAAACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGKTLLRKINRPFGNLLSSTGLW*GASKQS Trigger: GCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGA...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | CCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAAGTTGGAGGGCCCAGTTaGGAATACCAGCTATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PFMFQGSLHLLHKYQQHKVGGPS*EYQLSF Trigger: AAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAAC...TTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | TTCTCTGATGAGCATGCCCCACTCTGCCACAATCAGTTATATATTTGCAATTCAACTCTCCCAGAAACATaGTTTCCTAAGCTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FSDEHAPLCHNQLYICNSTLPET*FPKLPP Trigger: TGGTGGAAGCTTAGGAAACAATGTTTCTGGGAGAGT...TGAATTGCAAATATATAACTGATTGTGGCAGAGTGGGGCATGCTCATCAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
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| CDS-3UTR CAA 90 bp | TGGAAGTCCATTCACCATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTGCATTCAGGATTATCTaGAATAAGTGGTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKSIHHSCFKGLFICSTSAFRII*NKWFSL Trigger: CAAGCTGAACCACTTATTCAAGATAATCCTGAATGC...ACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAATGGTGAATGGACTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAGTTGGAGGGCCCAGTTaGGAATACCAGCTATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EFTISDYNSYDYLVLDQTVGGPS*EYQLSF Trigger: AAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAAC...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTGTTGGAGGGCCCAGTTaGGAATACCAGCTATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHVSRVSSFAPQVSTTQIVGGPS*EYQLSF Trigger: AAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAAC...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 90 bp | AATACCAGCTATCCTTTACAACATTGTAGCAATCCATTCGCTTTATaGGGAAAAGCTGAGAACCTCCCAAAATGTATACTACATTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NTSYPLQHCSNPFAL*GKAENLPKCILHCP Trigger: GGGACAATGTAGTATACATTTTGGGAGGTTCTCAGCTTTTCCCCATAAAGCGAATGGATTGCTACAATGTTGTAAAGGATAGCTGGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS-3UTR CAA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACACTCTGTTTCCTCATGTaGTTCATGACGCCCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EFTISDYNSYDYLVLDQTLCFLM*FMTPMN Trigger: GTTCATGGGCGTCATGAACAACATGAGGAAACAGAG...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | GAGTTTACCATCTCCGACTATAATTCATACGATTACTTAGTTCTTGACCAAACAGCCAACTCTCGGTCCTaGTATCATAGCATTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: EFTISDYNSYDYLVLDQTANSRS*YHSIQT Trigger: TGTTTGAATGCTATGATACAAGGACCGAGAGTTGGC...TGTTTGGTCAAGAACTAAGTAATCGTATGAATTATAGTCGGAGATGGTAAACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR CAA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTGCCAACTCTCGGTCCTaGTATCATAGCATTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: IHVSRVSSFAPQVSTTQIANSRS*YHSIQT Trigger: TGTTTGAATGCTATGATACAAGGACCGAGAGTTGGC...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163409.5 |
||
| CDS-3UTR CAA 90 bp | GGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGTTTACTCTCCCAGAAACATaGTTTCCTAAGCTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GTVKSQKSEKFCEKVCMFTLPET*FPKLPP Trigger: TGGTGGAAGCTTAGGAAACAATGTTTCTGGGAGAGT...AAACATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
||
| CDS-3UTR CAA 90 bp | GGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGTTTTCAGGTTCAGCATCTTaGAGTTCTACTTCAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GTVKSQKSEKFCEKVCMFSGSAS*SSTSKD Trigger: GTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGA...AAACATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGTACAGTTAAGTCCCAAAAATCTGAGAAGTTTTGTGAGAAAGTGTGTATGAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGTVKSQKSEKFCEKVCMSKFHQ*FNNIRF Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...CATACACACTTTCTCACAAAACTTCTCAGATTTTTGGGACTTAACTGTACCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAAAACATTACTGAGAAAAATTAATAGGCCGTTTGGTAATTTGTTGTCCGCATTCAGGATTATCTaGAATAAGTGGTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGKTLLRKINRPFGNLLSAFRII*NKWFSL Trigger: CAAGCTGAACCACTTATTCAAGATAATCCTGAATGC...GGACAACAAATTACCAAACGGCCTATTAATTTTTCTCAGTAATGTTTTGCCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS-3UTR CAA 90 bp | ATTCATGTTTCAAGGGTCTCTTCATTTGCTCCACAAGTATCAACAACACAAATTAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IHVSRVSSFAPQVSTTQISKFHQ*FNNIRF Trigger: GAACCTGATATTATTGAACAACTGGTGGAATTTGCT...AATTTGTGTTGTTGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS GCA 72 bp | CAACCACCTCACGGCAGCGTCATAAACCTGGTCCTCTaGTCTCACAGTCAGGGTGTCCTGGCTGAGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: QPPHGSVINLVL*SHSQGVLAEKM Trigger: CATCTTCTCAGCCAGGACACCCTGACTGTGAGAGCAGAGGACCAGGTTTATGACGCTGCCGTGAGGTGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS CCA 72 bp | TTCTGCTGCACAGGCAGCAAGGCTGTCTCGAGGTGTTaGAGGGCCCAGTTTGGAATACCAGCTATCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: FCCTGSKAVSRC*RAQFGIPAILY Trigger: GTAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCCTTGCTGCCTGTGCAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS CAA 72 bp | ATGTTGTTCATGACGCCCATGAACCCCGCCAGCAGCTaGGCTTCTTCGCGAGCCGCAAGTTTCTTCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: MLFMTPMNPASS*ASSRAASFFSV Trigger: AACTGAGAAGAAACTTGCGGCTCGCGAAGAAGCCAAGCTGCTGGCGGGGTTCATGGGCGTCATGAACAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS CAA 72 bp | CTTCTGCTGCACAGGCAGCAAGGCTGTCTCGAGGTGTaGGAGGGCCCAGTTTGGAATACCAGCTATCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLHRQQGCLEV*EGPVWNTSYPL Trigger: TAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCCTTGCTGCCTGTGCAGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS TCA 72 bp | CAACGCGGTGAGCGGGGATCTTTCTTTCCTGGACAGTaGGGATCACGTCACACAGTGTTCTCTGTTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRGERGSFFPGQ*GSRHTVFSVSS Trigger: TGAGGAAACAGAGAACACTGTGTGACGTGATCCTCACTGTCCAGGAAAGAAAGATCCCCGCTCACCGCGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS CAA 72 bp | AGGATCACGTCACACAGTGTTCTCTGTTTCCTCATGTaGTTCATGACGCCCATGAACCCCGCCAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RITSHSVLCFLM*FMTPMNPASSL Trigger: CAAGCTGCTGGCGGGGTTCATGGGCGTCATGAACAACATGAGGAAACAGAGAACACTGTGTGACGTGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
||
| CDS CAA 90 bp | TGTTTCCTCATGTTGTTCATGACGCCCATGAACCCCGCCAGCAGCTaGGCTTCTTCGCGAGCCGCAAGTTTCTTCTCAGTTTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CFLMLFMTPMNPASS*ASSRAASFFSVFFL Trigger: CAAGAAGAAAACTGAGAAGAAACTTGCGGCTCGCGAAGAAGCCAAGCTGCTGGCGGGGTTCATGGGCGTCATGAACAACATGAGGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CAA 90 bp | AGCGCTGAGTCAGCATGCTGGGCTTCGTGTGCCAACTCTCGGTCCTaGTATCATAGCATTCAAACAAATACAGGGCCGAGTTTCCTACTT | + |
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Preference number: 6 (lower is better) Translates to: SAESACWASCANSRS*YHSIQTNTGPSFLL Trigger: AAGTAGGAAACTCGGCCCTGTATTTGTTTGAATGCTATGATACAAGGACCGAGAGTTGGCACACGAAGCCCAGCATGCTGACTCAGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
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| CDS CAA 90 bp | AAATTTTGCCTTCTGCTGCACAGGCAGCAAGGCTGTCTCGAGGTGTaGGAGGGCCCAGTTTGGAATACCAGCTATCCTTTACAACATTGT | + |
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Preference number: 6 (lower is better) Translates to: KFCLLLHRQQGCLEV*EGPVWNTSYPLQHC Trigger: ACAATGTTGTAAAGGATAGCTGGTATTCCAAACTGGGCCCTCCAACACCTCGAGACAGCCTTGCTGCCTGTGCAGCAGAAGGCAAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 72 bp | AACCTGACTTTAGCAAGGATATCAACCATGAATGGCTaGCGGTTAGGCTCATCATATTTCAACCACCTCACG | + |
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Preference number: 6 (lower is better) Translates to: NLTLARISTMNG*RLGSSYFNHLT Trigger: CGTGAGGTGGTTGAAATATGATGAGCCTAACCGCCAGCCATTCATGGTTGATATCCTTGCTAAAGTCAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 72 bp | AGGAAACCTGACTTTAGCAAGGATATCAACCATGAATaGCTGGCGGTTAGGCTCATCATATTTCAACCACCT | + |
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Preference number: 6 (lower is better) Translates to: RKPDFSKDINHE*LAVRLIIFQPP Trigger: AGGTGGTTGAAATATGATGAGCCTAACCGCCAGCCATTCATGGTTGATATCCTTGCTAAAGTCAGGTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 72 bp | ACTGTAATCCTTTGGGTTAAAATATCTACAGGACTGTaGTTGGGAGCCTCCAAACAGAGCTATGCGGTAATC | + |
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Preference number: 6 (lower is better) Translates to: TVILWVKISTGL*LGASKQSYAVI Trigger: GATTACCGCATAGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATATTTTAACCCAAAGGATTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CAA 72 bp | GTAATCCTTTGGGTTAAAATATCTACAGGACTGTGGTaGGGAGCCTCCAAACAGAGCTATGCGGTAATCATG | + |
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Preference number: 6 (lower is better) Translates to: VILWVKISTGLW*GASKQSYAVIM Trigger: CATGATTACCGCATAGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATATTTTAACCCAAAGGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS TCA 72 bp | GCATTCAAACAAATACAGGGCCGAGTTTCCTACTTCTaGACCTCCAGATGTATAAATTTTGCCTTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AFKQIQGRVSYF*TSRCINFAFCC Trigger: GCAGCAGAAGGCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCGGCCCTGTATTTGTTTGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 |
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| CDS CAA 90 bp | TGTCCAACTGTAATCCTTTGGGTTAAAATATCTACAGGACTGTGGTaGGGAGCCTCCAAACAGAGCTATGCGGTAATCATGTTTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CPTVILWVKISTGLW*GASKQSYAVIMFLS Trigger: AGAAAGAAACATGATTACCGCATAGCTCTGTTTGGAGGCTCCCAACCACAGTCCTGTAGATATTTTAACCCAAAGGATTACAGTTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CCA 72 bp | TATCCTTTACAACATTGTAGCAATCCATTCGCTTTATaGGGAAAAGCTGAGAACCTCCCAAAATGTATACTA | + |
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Preference number: 6 (lower is better) Translates to: YPLQHCSNPFAL*GKAENLPKCIL Trigger: TAGTATACATTTTGGGAGGTTCTCAGCTTTTCCCCATAAAGCGAATGGATTGCTACAATGTTGTAAAGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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| CDS CAA 72 bp | CACAGAAATTCTAGCAGTATAAGCAAATTCCACCAGTaGTTCAATAATATCAGGTTCAGCATCTTTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: HRNSSSISKFHQ*FNNIRFSIFEF Trigger: GAACTCAAAGATGCTGAACCTGATATTATTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030841.10 ENSMUST00000163409.5 ENSMUST00000200116.5 |
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