Pregenerated sensors for KLHL42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040102Ensembl transcript IDs: ENSMUST00000036003.8, ENSMUST00000203441.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTGGTGCCAAGGGGAGAAGCCTCCCGGAGTAGGAGTGCACACTTaGCAGGAAGCTCCCTTGGGGGTACTCCCAGACACTTCCTGCTAC | + |
|
Preference number: 1 (lower is better) Translates to: FWCQGEKPPGVGVHT*QEAPLGVLPDTSCY Trigger: GTAGCAGGAAGTGTCTGGGAGTACCCCCAAGGGAGCTTCCTGTCAAGTGTGCACTCCTACTCCGGGAGGCTTCTCCCCTTGGCACCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | GAATCTGCCTGTAGCTCTTGGTTCTCTGTGGAGCTTTCTTTAATGTaGAAGGCGGCAGCCCGCTGCTGGTGTGGAGATGGAGTCCGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: ESACSSWFSVELSLM*KAAARCWCGDGVRS Trigger: GGACCGGACTCCATCTCCACACCAGCAGCGGGCTGCCGCCTTGCACATTAAAGAAAGCTCCACAGAGAACCAAGAGCTACAGGCAGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 90 bp | ACACAGACCCCGTACTCCTGGGTAAGGTCAAGACAGCCTTCAGCATaGTCCCTTTGTCCTGCAGCCCCTCACGTCAGCAGTGCTAAGCTA | + |
|
Preference number: 1 (lower is better) Translates to: TQTPYSWVRSRQPSA*SLCPAAPHVSSAKL Trigger: TAGCTTAGCACTGCTGACGTGAGGGGCTGCAGGACAAAGGGATCATGCTGAAGGCTGTCTTGACCTTACCCAGGAGTACGGGGTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | CGAAGTCTGCAGTCGGCACCAGCTGAACTCCAAGTGCTCTCAGAATaGTCAGAAAGGGCACAGGCAGACAGATGTCATAAAACCCTCCCA | + |
|
Preference number: 1 (lower is better) Translates to: RSLQSAPAELQVLSE*SERAQADRCHKTLP Trigger: TGGGAGGGTTTTATGACATCTGTCTGCCTGTGCCCTTTCTGAGCATTCTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | AACGTGTTTATCCACGTTTGTGGATGCTCTGGCTGCTTATGTGGATaGTCTGGCTGCCTCTATCCTTGTAGCAGGCAAGGCAGCCATAGC | + |
|
Preference number: 1 (lower is better) Translates to: NVFIHVCGCSGCLCG*SGCLYPCSRQGSHS Trigger: GCTATGGCTGCCTTGCCTGCTACAAGGATAGAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATCCACAAACGTGGATAAACACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | TATCATCCTGGCGAAGTCTGCAGTCGGCACCAGCTGAACTCCAAGTaGTCTCAGAATGCTCAGAAAGGGCACAGGCAGACAGATGTCATA | + |
|
Preference number: 1 (lower is better) Translates to: YHPGEVCSRHQLNSK*SQNAQKGHRQTDVI Trigger: TATGACATCTGTCTGCCTGTGCCCTTTCTGAGCATTCTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCCAGGATGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | AGGAAGGGAAGGTTTCCAAAGGAACACTATCATCCTGGCGAAGTCTaGAGTCGGCACCAGCTGAACTCCAAGTGCTCTCAGAATGCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: RKGRFPKEHYHPGEV*SRHQLNSKCSQNAQ Trigger: CTGAGCATTCTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCCAGGATGATAGTGTTCCTTTGGAAACCTTCCCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | AAAGGCCAGCAGAGGCCTTCCCATGTCTGTAAAGGACATCTCCCCTaGTTTCTAGCACACATCAGCTACAGCCATCCTTCCCTTAAAAAG | + |
|
Preference number: 1 (lower is better) Translates to: KGQQRPSHVCKGHLP*FLAHISYSHPSLKK Trigger: CTTTTTAAGGGAAGGATGGCTGTAGCTGATGTGTGCTAGAAAGCAGGGGAGATGTCCTTTACAGACATGGGAAGGCCTCTGCTGGCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | TTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTGGTTTCATaGTTAATCCTAAGCCGTATGCGTTTCTTGCCAGCATCCCCCACC | + |
|
Preference number: 1 (lower is better) Translates to: LETTEHSRVKVSLVS*LILSRMRFLPASPT Trigger: GGTGGGGGATGCTGGCAAGAAACGCATACGGCTTAGGATTAAGCATGAAACCAAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 90 bp | GCCTTCCCTCTGCTTGAACGGAAACCTAAGGCATTTAAGTTTGCTTaGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: AFPLLERKPKAFKFA*VLGVRNNRTQQGQG Trigger: ACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAGAGGGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 90 bp | GATACAACAAATCACATTTTCCTTTGCTTTGCCAGTAACAAGCTATaGAAAGCACCAACCAGCCCTACGGAAACACTGAGCACCCTGGGC | + |
|
Preference number: 1 (lower is better) Translates to: DTTNHIFLCFASNKL*KAPTSPTETLSTLG Trigger: GCCCAGGGTGCTCAGTGTTTCCGTAGGGCTGGTTGGTGCTTTCCATAGCTTGTTACTGGCAAAGCAAAGGAAAATGTGATTTGTTGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 90 bp | CGAACTCAACCATCCTCCGTGATAAAGTATCCAAGGGAGCATTGCTaGGTTCTTCCACGGGAATGTTTTAAAGGCAAAGGCGTAAACGTA | + |
|
Preference number: 1 (lower is better) Translates to: RTQPSSVIKYPREHC*VLPRECFKGKGVNV Trigger: TACGTTTACGCCTTTGCCTTTAAAACATTCCCGTGGAAGAACTCAGCAATGCTCCCTTGGATACTTTATCACGGAGGATGGTTGAGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 90 bp | TATACTGCACACAGGCTACATGTTAAGCCTGGGGTGAGAGCTTTGTaGATGTCAGTGTTAGAACTTCATTTGGTCCAAGAATCTAGTTGC | + |
|
Preference number: 1 (lower is better) Translates to: YTAHRLHVKPGVRAL*MSVLELHLVQESSC Trigger: GCAACTAGATTCTTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGCTTAACATGTAGCCTGTGTGCAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 90 bp | CAAACTAACGAAAGTGAAAAGCAAACACGTGTACTAAACCTAAGGTaGAAACCACTCGACAGTCATCAGCAAGGCGAACTCAACCATCCT | + |
|
Preference number: 1 (lower is better) Translates to: QTNESEKQTRVLNLR*KPLDSHQQGELNHP Trigger: AGGATGGTTGAGTTCGCCTTGCTGATGACTGTCGAGTGGTTTCCACCTTAGGTTTAGTACACGTGTTTGCTTTTCACTTTCGTTAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 90 bp | TACTTTAGACAGCATTTTCAATTGCACAAAGACTGGGAAAGTGGCTaGGAACGTGTTTATCCACGTTTGTGGATGCTCTGGCTGCTTATG | + |
|
Preference number: 1 (lower is better) Translates to: YFRQHFQLHKDWESG*ERVYPRLWMLWLLM Trigger: CATAAGCAGCCAGAGCATCCACAAACGTGGATAAACACGTTCTCAGCCACTTTCCCAGTCTTTGTGCAATTGAAAATGCTGTCTAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | ATTTATAGTGTTTATAGCAATCTTCTAAAAACAAAGTCCTCACAATaGAGCTGTGGTGACCCACACAGACCCTCATTTGCCACACATGAC | + |
|
Preference number: 1 (lower is better) Translates to: IYSVYSNLLKTKSSQ*SCGDPHRPSFATHD Trigger: GTCATGTGTGGCAAATGAGGGTCTGTGTGGGTCACCACAGCTGCATTGTGAGGACTTTGTTTTTAGAAGATTGCTATAAACACTATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 90 bp | ATGTCCAAAGATGGCCATCAGGAAGAGAACAAGTCAACAGGTAGATaGCATGATGGGCTTTTAAGATCTGTATTTTCACAAGATAATTGC | + |
|
Preference number: 1 (lower is better) Translates to: MSKDGHQEENKSTGR*HDGLLRSVFSQDNC Trigger: GCAATTATCTTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTTGTTCTCTTCCTGATGGCCATCTTTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036003.8 ENSMUST00000203441.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAGTGGGCAGTGGGCCCAGTGTGCCTGACTAAAGTGGGCATCTCTGACTACAGCTTCCCTCTCCCATaGCCAGCTACCAGGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RQWAVGPVCLTKVGISDYSFPLP*PATRKA Trigger: TGCTTTCCTGGTAGCTGGCCATGGGAGAGGGAAGCT...GTAGTCAGAGATGCCCACTTTAGTCAGGCACACTGGGCCCACTGCCCACTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGAGAACAATGCAGCTGTGGTaGCCCACACAGACCCTCATT | + |
|
Preference number: 2 (lower is better) Translates to: VGARTPQKLVVGGVRQQRTMQLW*PTQTLI Trigger: AATGAGGGTCTGTGTGGGTCACCACAGCTGCATTGT...TCTCTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGGACTGGGAAAGTGGCTaGGAACGTGTTTATCCACGT | + |
|
Preference number: 2 (lower is better) Translates to: TVGARTPQKLVVGGVRQQDWESG*ERVYPR Trigger: ACGTGGATAAACACGTTCTCAGCCACTTTCCCAGTC...CTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGAGATCTGCCTGTAGCTCTTaGTTCTCTGTGGAGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VGARTPQKLVVGGVRQQRSACSS*FSVELS Trigger: AGAAAGCTCCACAGAGAACCAAGAGCTACAGGCAGA...TCTCTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | GCAGCCCCTCACGTCAGCAGTGCTAAGCTAAGCTCACCCAACACCTaGACAAAGACATCAGGGCCCCTTCTATTTACCTCTTTGGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AAPHVSSAKLSSPNT*TKTSGPLLFTSLAK Trigger: TTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCTTTGTCAAGGTGTTGGGTGAGCTTAGCTTAGCACTGCTGACGTGAGGGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTGGGAGTCTGTGCATCTAAACCCCAGAGCCATATACTGCACACAGGCTACACAGAAGCAAGAGGCTaGGGTGAGAGTCTCCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLGVCASKPQSHILHTGYTEARG*GESLQF Trigger: AAACTGGAGACTCTCACCTCAGCCTCTTGCTTCTGT...GTAGCCTGTGTGCAGTATATGGCTCTGGGGTTTAGATGCACAGACTCCCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGTATAGAGCTACAGTATCCTCGCCTTCCCTCTGCTTGAACGGAAACCTAGAGCTTTCTTTAATGTaGAAGGCGGCAGCCCGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SQYRATVSSPSLCLNGNLELSLM*KAAARC Trigger: GCAGCGGGCTGCCGCCTTGCACATTAAAGAAAGCTC...TAGGTTTCCGTTCAAGCAGAGGGAAGGCGAGGATACTGTAGCTCTATACTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTATAGATATGCGACAATGCTGATGTGTGTGTTTATGCCACACTCCAAACTAGCCCTACGGAAACACTaGGCACCCTGGGCTCTACGG | + |
|
Preference number: 2 (lower is better) Translates to: GYRYATMLMCVFMPHSKLALRKH*APWALR Trigger: CCGTAGAGCCCAGGGTGCTCAGTGTTTCCGTAGGGC...TAGTTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACATCAGGGCCCCTTCTATTTACCTCTTTGGCCAAACAGGCTTATAACTTTCGTAGGAGTGCACACTTaGCAGGAAGCTCCCTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: RHQGPFYLPLWPNRLITFVGVHT*QEAPLG Trigger: CCCCAAGGGAGCTTCCTGTCAAGTGTGCACTCCTAC...GAAAGTTATAAGCCTGTTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAAAGGCGTAAACGTACCAGCGCTGAGCTTACTCGTGCCAAATCTTCACCTTAAAGGACATCTCCCCTaGTTTCTAGCACACATCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GKGVNVPALSLLVPNLHLKGHLP*FLAHIS Trigger: GCTGATGTGTGCTAGAAAGCAGGGGAGATGTCCTTT...AAGGTGAAGATTTGGCACGAGTAAGCTCAGCGCTGGTACGTTTACGCCTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAAAGGCGTAAACGTACCAGCGCTGAGCTTACTCGTGCCAAATCTTCACCTTGCATCTTTCCTCATGTaGTCCTCCTCCTCATCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: GKGVNVPALSLLVPNLHLASFLM*SSSSSK Trigger: CTTAGATGAGGAGGAGGACCACATGAGGAAAGATGC...AAGGTGAAGATTTGGCACGAGTAAGCTCAGCGCTGGTACGTTTACGCCTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | TCCTCGCCTTCCCTCTGCTTGAACGGAAACCTAAGGCATTTAAGTTaGCTTGGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSPSLCLNGNLRHLS*LGFLALETTEHSRV Trigger: GACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAGAGGGAAGGCGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | CTGTTCTCCCAGTATAGAGCTACAGTATCCTCGCCTTCCCTCTGCTaGAACGGAAACCTAAGGCATTTAAGTTTGCTTGGGTTCTTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: LFSQYRATVSSPSLC*NGNLRHLSLLGFLA Trigger: CGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAGAGGGAAGGCGAGGATACTGTAGCTCTATACTGGGAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTGGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTCGTTTGTGGATGCTCTaGCTGCTTATGTGGATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AWVLGVRNNRTQQGQGLFRLWML*LLMWML Trigger: GAGCATCCACATAAGCAGCCAGAGCATCCACAAACG...AAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTGGGAGTCTGTGCATCTAAACCCCAGAGCCATATACTGCACACAGGCTACTTACAAGATAGCAGCTaGTTGCAGCAAATTCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLGVCASKPQSHILHTGYLQDSS*LQQILF Trigger: GAAGAGAATTTGCTGCAACCAGCTGCTATCTTGTAA...GTAGCCTGTGTGCAGTATATGGCTCTGGGGTTTAGATGCACAGACTCCCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | CCCAACACCTTGACAAAGACATCAGGGCCCCTTCTATTTACCTCTTaGGCCAAACAGGCTTATAACTTTCCCTGGAATTATGAGGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: PNTLTKTSGPLLFTS*AKQAYNFPWNYEDC Trigger: GCAGTCCTCATAATTCCAGGGAAAGTTATAAGCCTGTTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCTTTGTCAAGGTGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTGGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTAGGACTTCAAAGGCTTaGTTTTTCCCCCTTGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: AWVLGVRNNRTQQGQGLFRTSKA*FFPLEP Trigger: TGGTTCAAGGGGGAAAAAGCAAGCCTTTGAAGTCCT...AAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGGGGTGAGAGCTTTGTGGATGTCAGTGTTAGAACTTCATTTGGTCCAAGAAGGACTTCAAAGGCTTaGTTTTTCCCCCTTGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: AWGESFVDVSVRTSFGPRRTSKA*FFPLEP Trigger: TGGTTCAAGGGGGAAAAAGCAAGCCTTTGAAGTCCT...TCTTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036003.8 ENSMUST00000203441.2 |
||
| 3UTR CAA 90 bp | TTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTaGGTTTCATGCTTAATCCTAAGCCGTATGCGTTTCTTGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLALETTEHSRVKVS*VSCLILSRMRFLPA Trigger: TGCTGGCAAGAAACGCATACGGCTTAGGATTAAGCATGAAACCAAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | CTCTGCTTGAACGGAAACCTAAGGCATTTAAGTTTGCTTGGGTTCTaGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LCLNGNLRHLSLLGF*ALETTEHSRVKVSL Trigger: CAAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAAAGGCGTAAACGTACCAGCGCTGAGCTTACTCGTGCCAAATCTTCACCTTTATTCAGGACTAGGCTaGATAAAAATGAAGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GKGVNVPALSLLVPNLHLYSGLG*IKMKSH Trigger: ATGGCTCTTCATTTTTATGCAGCCTAGTCCTGAATA...AAGGTGAAGATTTGGCACGAGTAAGCTCAGCGCTGGTACGTTTACGCCTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTGGGAGTCTGTGCATCTAAACCCCAGAGCCATATACTGCACACAGGCTACTTTTCACAAGATAATTaGCCATCTTTGTCCATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLGVCASKPQSHILHTGYFSQDN*PSLSIA Trigger: AGCAATGGACAAAGATGGGCAATTATCTTGTGAAAA...GTAGCCTGTGTGCAGTATATGGCTCTGGGGTTTAGATGCACAGACTCCCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | CCATATACTGCACACAGGCTACATGTTAAGCCTGGGGTGAGAGCTTaGTGGATGTCAGTGTTAGAACTTCATTTGGTCCAAGAATCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: PYTAHRLHVKPGVRA*WMSVLELHLVQESS Trigger: ACTAGATTCTTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGCTTAACATGTAGCCTGTGTGCAGTATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGGGGTGAGAGCTTTGTGGATGTCAGTGTTAGAACTTCATTTGGTCCAAGAAGATCTCAGGTGACCTaGAGAAAGGGCATTTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: AWGESFVDVSVRTSFGPRRSQVT*RKGIFN Trigger: ATTAAAAATGCCCTTTCTTCAGGTCACCTGAGATCT...TCTTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036003.8 ENSMUST00000203441.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTATAGATATGCGACAATGCTGATGTGTGTGTTTATGCCACACTCCAAACTAGAAAACAGATGTGGCTaGAAATGGCCTGTAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GYRYATMLMCVFMPHSKLENRCG*KWPVSF Trigger: GAAGCTTACAGGCCATTTCCAGCCACATCTGTTTTC...TAGTTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 90 bp | TATGGCTATGTCAAGTGGCAGCTGGCAGTCACTATGTATTTCCTGTaGTGTTTCCAAACTAACGAAAGTGAAAAGCAAACACGTGTACTA | + |
|
Preference number: 2 (lower is better) Translates to: YGYVKWQLAVTMYFL*CFQTNESEKQTRVL Trigger: TAGTACACGTGTTTGCTTTTCACTTTCGTTAGTTTGGAAACACAACAGGAAATACATAGTGACTGCCAGCTGCCACTTGACATAGCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCAACAGAGAATGGAAAGAAATACGAAGTATCGCATAAGGAGTTGTCTGAGGCTGTATTAGAGGCATaGCTGCAAAGAAACTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KATENGKKYEVSHKELSEAVLEA*LQRNSE Trigger: TTCAGAGTTTCTTTGCAGCCATGCCTCTAATACAGC...CTCAGACAACTCCTTATGCGATACTTCGTATTTCTTTCCATTCTCTGTTGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | CAAGGGGAGAAGCCTCCCGGAGTAGGAGTGCACACTTaGCAGGAAGCTCCCTTGGGGGTACTCCCAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: QGEKPPGVGVHT*QEAPLGVLPDT Trigger: AGTGTCTGGGAGTACCCCCAAGGGAGCTTCCTGTCAAGTGTGCACTCCTACTCCGGGAGGCTTCTCCCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGTGGGCAGTGGGCCCAGTGTGCCTGACTAAAGTGGGCATCTCTGACTACAGTAGGAGTGCACACTaGACAGGAAGCTCCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQWAVGPVCLTKVGISDYSRSAH*TGSSLG Trigger: CCCAAGGGAGCTTCCTGTCAAGTGTGCACTCCTACT...GTAGTCAGAGATGCCCACTTTAGTCAGGCACACTGGGCCCACTGCCCACTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | CCGTACTCCTGGGTAAGGTCAAGACAGCCTTCAGCATaGTCCCTTTGTCCTGCAGCCCCTCACGTCAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PYSWVRSRQPSA*SLCPAAPHVSS Trigger: ACTGCTGACGTGAGGGGCTGCAGGACAAAGGGATCATGCTGAAGGCTGTCTTGACCTTACCCAGGAGTACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | GGCGAAGTCTGCAGTCGGCACCAGCTGAACTCCAAGTaGTCTCAGAATGCTCAGAAAGGGCACAGGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GEVCSRHQLNSK*SQNAQKGHRQT Trigger: TGTCTGCCTGTGCCCTTTCTGAGCATTCTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | TGTGGATGCTCTGGCTGCTTATGTGGATGCTCTGGCTaGCTCTATCCTTGTAGCAGGCAAGGCAGCCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: CGCSGCLCGCSG*LYPCSRQGSHS Trigger: GCTATGGCTGCCTTGCCTGCTACAAGGATAGAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATCCACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | CTCTATCCTTGTAGCAGGCAAGGCAGCCATAGCTTGTaGGCCCCAAGGACAGCTACGAAGCAGCCAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LYPCSRQGSHSL*APRTATKQPTQ Trigger: TTGTGTTGGCTGCTTCGTAGCTGTCCTTGGGGCCCACAAGCTATGGCTGCCTTGCCTGCTACAAGGATAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | ACTATCATCCTGGCGAAGTCTGCAGTCGGCACCAGCTaGACTCCAAGTGCTCTCAGAATGCTCAGAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TIILAKSAVGTS*TPSALRMLRKG Trigger: GCCCTTTCTGAGCATTCTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCCAGGATGATAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | AGCTATGGAAAGCACCAACCAGCCCTACGGAAACACTaGGCACCCTGGGCTCTACGGAATGGACCCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SYGKHQPALRKH*APWALRNGPSF Trigger: AAAAGAGGGTCCATTCCGTAGAGCCCAGGGTGCTCAGTGTTTCCGTAGGGCTGGTTGGTGCTTTCCATAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | ATCCACGTTTGTGGATGCTCTGGCTGCTTATGTGGATaGTCTGGCTGCCTCTATCCTTGTAGCAGGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IHVCGCSGCLCG*SGCLYPCSRQG Trigger: GCCTTGCCTGCTACAAGGATAGAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATCCACAAACGTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | CTTCATACTGACTATCTCGGAGGCAGGGGCAGGAACTaGCATTCACTTCACTCTGGTAGGCTGGCAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: LHTDYLGGRGRN*HSLHSGRLAGC Trigger: ACATCCTGCCAGCCTACCAGAGTGAAGTGAATGCCAGTTCCTGCCCCTGCCTCCGAGATAGTCAGTATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | CCTACGGAAACACTGAGCACCCTGGGCTCTACGGAATaGACCCTCTTTTTCATTTCACGGGCTTCCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTETLSTLGSTE*TLFFISRASCR Trigger: CCTACAGGAAGCCCGTGAAATGAAAAAGAGGGTCCATTCCGTAGAGCCCAGGGTGCTCAGTGTTTCCGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | CAGAGGCCTTCCCATGTCTGTAAAGGACATCTCCCCTaGTTTCTAGCACACATCAGCTACAGCCATCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QRPSHVCKGHLP*FLAHISYSHPS Trigger: GGAAGGATGGCTGTAGCTGATGTGTGCTAGAAAGCAGGGGAGATGTCCTTTACAGACATGGGAAGGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | AGGTTTCCAAAGGAACACTATCATCCTGGCGAAGTCTaGAGTCGGCACCAGCTGAACTCCAAGTGCTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RFPKEHYHPGEV*SRHQLNSKCSQ Trigger: CTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCCAGGATGATAGTGTTCCTTTGGAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | AGAGATTCTCACACAATCATCTCAGAACCTTTCTGGTaGCAAGGGGAGAAGCCTCCCGGAGTAGGAGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RDSHTIISEPFW*QGEKPPGVGVH Trigger: GTGCACTCCTACTCCGGGAGGCTTCTCCCCTTGGCACCAGAAAGGTTCTGAGATGATTGTGTGAGAATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | GAGGAAGGGAAGGTTTCCAAAGGAACACTATCATCCTaGCGAAGTCTGCAGTCGGCACCAGCTGAACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EEGKVSKGTLSS*RSLQSAPAELQ Trigger: TTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCCAGGATGATAGTGTTCCTTTGGAAACCTTCCCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | CTAAAGTGGGCATCTCTGACTACACCATGGCTGAAATaGGAGCACATTGTCCCAGGGACAGTGGCTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LKWASLTTPWLK*EHIVPGTVAQS Trigger: TGACTGAGCCACTGTCCCTGGGACAATGTGCTCTCATTTCAGCCATGGTGTAGTCAGAGATGCCCACTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | AAAGTGGCTGAGAACGTGTTTATCCACGTTTGTGGATaGTCTGGCTGCTTATGTGGATGCTCTGGCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KVAENVFIHVCG*SGCLCGCSGCL Trigger: GAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATCCACAAACGTGGATAAACACGTTCTCAGCCACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | CAGTCGGCACCAGCTGAACTCCAAGTGCTCTCAGAATaGTCAGAAAGGGCACAGGCAGACAGATGTCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: QSAPAELQVLSE*SERAQADRCHK Trigger: TTTATGACATCTGTCTGCCTGTGCCCTTTCTGAGCATTCTGAGAGCACTTGGAGTTCAGCTGGTGCCGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | GAGAACGTGTTTATCCACGTTTGTGGATGCTCTGGCTaGTTATGTGGATGCTCTGGCTGCCTCTATCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ENVFIHVCGCSG*LCGCSGCLYPC Trigger: ACAAGGATAGAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATCCACAAACGTGGATAAACACGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | CTCTTTTTCATTTCACGGGCTTCCTGTAGGAATGGGTaGATATGGCTATGTCAAGTGGCAGCTGGCAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFFISRASCRNG*IWLCQVAAGSH Trigger: GTGACTGCCAGCTGCCACTTGACATAGCCATATTCACCCATTCCTACAGGAAGCCCGTGAAATGAAAAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | ACAGAACACAGCAGGGTCAAGGTCTCTTTGGTTTCATaGTTAATCCTAAGCCGTATGCGTTTCTTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TEHSRVKVSLVS*LILSRMRFLPA Trigger: TGCTGGCAAGAAACGCATACGGCTTAGGATTAAGCATGAAACCAAAGAGACCTTGACCCTGCTGTGTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | GAAAGTGAAAAGCAAACACGTGTACTAAACCTAAGGTaGAAACCACTCGACAGTCATCAGCAAGGCGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ESEKQTRVLNLR*KPLDSHQQGEL Trigger: GAGTTCGCCTTGCTGATGACTGTCGAGTGGTTTCCACCTTAGGTTTAGTACACGTGTTTGCTTTTCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | CTTCCTGTAGGAATGGGTGAATATGGCTATGTCAAGTaGCAGCTGGCAGTCACTATGTATTTCCTGTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPVGMGEYGYVK*QLAVTMYFLLC Trigger: ACACAACAGGAAATACATAGTGACTGCCAGCTGCCACTTGACATAGCCATATTCACCCATTCCTACAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | CAACACTTAATGTTTCTGGTCACCAAGGAATGGAATTaGTGTAGCTCACTACTTCCAGAGATCACAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QHLMFLVTKEWN*CSSLLPEITAP Trigger: GGGAGCTGTGATCTCTGGAAGTAGTGAGCTACATCAATTCCATTCCTTGGTGACCAGAAACATTAAGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | AACACTGGAGGGACAGAGAAATGTCGCACCCTGAAGTaGTACAACAAATCACATTTTCCTTTGCTTTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NTGGTEKCRTLK*YNKSHFPLLCQ Trigger: CTGGCAAAGCAAAGGAAAATGTGATTTGTTGTATCACTTCAGGGTGCGACATTTCTCTGTCCCTCCAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CCA 72 bp | CTGCTTGAACGGAAACCTAAGGCATTTAAGTTTGCTTaGGTTCTTGGCGTTAGAAACAACAGAACACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLERKPKAFKFA*VLGVRNNRTQQ Trigger: CTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTGTAAATGTGCAAACGTaGGTTTGGTTTGGTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AWVLGVRNNRTQQGQGLFVNVQT*VWFGFD Trigger: ATCAAAACCAAACCAAACCAACGTTTGCACATTTAC...AAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACATCAGGGCCCCTTCTATTTACCTCTTTGGCCAAACAGGCTTATAACTTTCGTGCTAAGTAGGTCCTaGAGTCTTTTAAGAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: RHQGPFYLPLWPNRLITFVLSRS*SLLRNT Trigger: TGTGTTTCTTAAAAGACTCAAGGACCTACTTAGCAC...GAAAGTTATAAGCCTGTTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | GATGGCCATCAGGAAGAGAACAAGTCAACAGGTAGATaGCATGATGGGCTTTTAAGATCTGTATTTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: DGHQEENKSTGR*HDGLLRSVFSQ Trigger: TTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTTGTTCTCTTCCTGATGGCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036003.8 ENSMUST00000203441.2 |
||
| 3UTR TCA 72 bp | AACAGATGTGGCTGGAAATGGCCTGTAAGCTTCCAATaGCATTATAAGCAGGTTGATTGGATATTGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NRCGWKWPVSFQ*HYKQVDWILVD Trigger: ATCTACCAATATCCAATCAACCTGCTTATAATGTCATTGGAAGCTTACAGGCCATTTCCAGCCACATCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | AAATGTACAAACACGGCTATAGATATGCGACAATGCTaGTGTGTGTGTTTATGCCACACTCCAAACTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KCTNTAIDMRQC*CVCLCHTPNYR Trigger: TCTGTAGTTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGCCGTGTTTGTACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR TCA 72 bp | TCTTTGTCCATTGCTAATTCATCTGCCAGTTTCCTCTaGATATTCAGGACTAGGCTGTTAGCGTTTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSIANSSASFL*IFRTRLLAFLK Trigger: TTTCAGAAACGCTAACAGCCTAGTCCTGAATATTCAGAGGAAACTGGCAGATGAATTAGCAATGGACAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203441.2 |
||
| 3UTR GCA 72 bp | TCCCAAATAAAGACTAGCAGAGATTCTAAACCACTGTaGAAAGAAGAGTTTTATAACGAGGCTCTAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQIKTSRDSKPL*KEEFYNEALKL Trigger: CAGCTTTAGAGCCTCGTTATAAAACTCTTCTTTGCACAGTGGTTTAGAATCTCTGCTAGTCTTTATTTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR GCA 72 bp | CATCTGCCAGTTTCCTCTGAATATTCAGGACTAGGCTaGATAAAAATGAAGAGCCATAACAACAAACATAAA | + |
|
Preference number: 3 (lower is better) Translates to: HLPVSSEYSGLG*IKMKSHNNKHK Trigger: TTTATGTTTGTTGTTATGGCTCTTCATTTTTATGCAGCCTAGTCCTGAATATTCAGAGGAAACTGGCAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGTGGGCAGTGGGCCCAGTGTGCCTGACTAAAGTGGGCATCTCTGACTACGCCTCTGCTTCAGGCTaGAGTCCCCGGGGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RQWAVGPVCLTKVGISDYASASG*SPRGPA Trigger: CGCAGGCCCCCGGGGACTGCAGCCTGAAGCAGAGGC...GTAGTCAGAGATGCCCACTTTAGTCAGGCACACTGGGCCCACTGCCCACTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGCCGGGGTCCCGCGCATaGGGGCCTCCCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGARTPQKLVVGGVRQQPGSRA*GPPSAS Trigger: AGAGGCTGAGGGAGGCCCGCATGCGCGGGACCCCGG...CTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCACTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGAGAGCCTCCCTCAGCCTCTaGTTCAGGCTGCAGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGARTPQKLVVGGVRQQRASLSL*FRLQSP Trigger: CGGGGACTGCAGCCTGAAGCAGAGGCTGAGGGAGGC...TCTCTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | CCAAGGGGAGAAGCCTCCCGGAGTAGGAGTGCACACTaGACAGGAAGCTCCCTTGGGGGTACTCCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PRGEASRSRSAH*TGSSLGGTPRH Trigger: GTGTCTGGGAGTACCCCCAAGGGAGCTTCCTGTCAAGTGTGCACTCCTACTCCGGGAGGCTTCTCCCCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGAGAAGCATGTCCTCACTCTaGCTGCTCCTGCGGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGARTPQKLVVGGVRQQRSMSSL*LLLRLG Trigger: GCCCAACCGCAGGAGCAGCCAGAGTGAGGACATGCT...TCTCTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGAGACGATCAGCTTGCTCTTaGTCACCGGGTAGCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGARTPQKLVVGGVRQQRRSACS*SPGSSG Trigger: ACCGCTGCTACCCGGTGAGCAAGAGCAAGCTGATCG...TCTCTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GCCCGTACAAAGCAGACCCTAGCAGTCTACTTTTTAATGGTGGGTTTTAGCTGTGCACGGCCTCGCGCATaGCGGAGCGGTAGAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ARTKQTLAVYFLMVGFSCARPRA*RSGRAR Trigger: GCGCGCTCTACCGCTCCGGCATGCGCGAGGCCGTGC...ACAGCTAAAACCCACCATTAAAAAGTAGACTGCTAGGGTCTGCTTTGTACGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGAGTCTGTGCATCTAAACCCCAGAGCCATATACTGCACACAGGCTACCACTCTGGCTGCTCCTaGGGTTGGGCCCCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVCASKPQSHILHTGYHSGCS*GWAPVH Trigger: ATGAACTGGGGCCCAACCGCAGGAGCAGCCAGAGTG...GTAGCCTGTGTGCAGTATATGGCTCTGGGGTTTAGATGCACAGACTCCCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATAGATATGCGACAATGCTGATGTGTGTGTTTATGCCACACTCCAAACTAAGGCCGCGCAGCTGCTaGACCTCCGGGCCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GYRYATMLMCVFMPHSKLRPRSC*TSGPTS Trigger: CGAGGTGGGCCCGGAGGTGCAGCAGCTGCGCGGCCT...TAGTTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCTCTGTCCCTTCAGGAGTCAGGACTTCAAAGGCTTGCTTTTTCCCCCTTGCACCCACGATGTAGATaGTCTCCTCCACGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PALSLQESGLQRLAFSPLHPRCR*SPPRTP Trigger: TGGTGTCCGTGGAGGAGACCATCTACATCGTGGGTG...CAAGGGGGAAAAAGCAAGCCTTTGAAGTCCTGACTCCTGAAGGGACAGAGCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTGGCCCGTACAAAGCAGACCCTAGCAGTCTACTTTTTAATGGTGGGTTTTGTCCTCACTCTGGCTaGTCCTGCGGTTGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGPYKADPSSLLFNGGFCPHSG*SCGWAP Trigger: TGGGGCCCAACCGCAGGAGCAGCCAGAGTGAGGACA...AAACCCACCATTAAAAAGTAGACTGCTAGGGTCTGCTTTGTACGGGCCAAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCAGTCTACTTTTTAATGGTGGGTTTTAGCTGTTGGTCCAAGACTGTTAGGCGCAGGCAGGCGTCCTaGAGGTCGGGCAGTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAVYFLMVGFSCWSKTVRRRQAS*RSGSPY Trigger: GTACGGACTGCCCGACCTGCAGGACGCCTGCCTGCG...CCTAACAGTCTTGGACCAACAGCTAAAACCCACCATTAAAAAGTAGACTGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCAACAGGTAGATGCCATGATGGGCTTTTAAGATCTGTATTTTCACAAGATCTCAGGCCGCGCAGCTaGTGCACCTCCGGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRCHDGLLRSVFSQDLRPRS*CTSGPT Trigger: GGTGGGCCCGGAGGTGCAGCAGCTGCGCGGCCTGAG...ATCTTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTGGCCCGTACAAAGCAGACCCTAGCAGTCTACTTTTTAATGGTGGGTTTTTGGGCCCCAGTTCATaGAGACACCCACCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLGPYKADPSSLLFNGGFLGPSS*RHPPTM Trigger: CATCGTGGGTGGGTGTCTCCATGAACTGGGGCCCAA...AAACCCACCATTAAAAAGTAGACTGCTAGGGTCTGCTTTGTACGGGCCAAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGGTGAGAGCTTTGTGGATGTCAGTGTTAGAACTTCATTTGGTCCAAGAAGATCTCCTGGCTGGTaGTCCTGTAACCACCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: AWGESFVDVSVRTSFGPRRSPGW*SCNHPR Trigger: TCGTGGGTGGTTACAGGATCACCAGCCAGGAGATCT...TCTTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTGCAGCCACTCGTTGGTaGTGGGATTGTAGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWVLGVRNNRTQQGQGLFAATRW*WDCRSV Trigger: CACACTCCTACAATCCCATCACCAACGAGTGGCTGC...AAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATAGATATGCGACAATGCTGATGTGTGTGTTTATGCCACACTCCAAACTATCTTCCAGGCGGATCTaGACCATCTCCTCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GYRYATMLMCVFMPHSKLSSRRI*TISSAD Trigger: GTCGGCCGAGGAGATGGTGCAGATCCGCCTGGAAGA...TAGTTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGGTGAGAGCTTTGTGGATGTCAGTGTTAGAACTTCATTTGGTCCAAGATCTGTTCGATCAGCTTaGTCTTGCTCACCGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGESFVDVSVRTSFGPRSVRSA*SCSPGS Trigger: GCTACCCGGTGAGCAAGAGCAAGCTGATCGAACAGA...TCTTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAACAGAGAATGGAAAGAAATACGAAGTATCGCATAAGGAGTTGTCTGAGGGCTGCTCCTGCGGTTaGGCCCCAGTTCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KATENGKKYEVSHKELSEGCSCG*APVHGD Trigger: GTCTCCATGAACTGGGGCCCAACCGCAGGAGCAGCC...CTCAGACAACTCCTTATGCGATACTTCGTATTTCTTTCCATTCTCTGTTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | GCACAGAAGCAAGAGGCTGAGGTGAGAGTCTCCAGTTaGGAGTTATCCTGGATTGTAAGGCAATACCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQKQEAEVRVSS*ELSWIVRQYPV Trigger: GACAGGGTATTGCCTTACAATCCAGGATAACTCCAAACTGGAGACTCTCACCTCAGCCTCTTGCTTCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | GGCTATAGATATGCGACAATGCTGATGTGTGTGTTTATGCCACACTCCAAACTATGTAGGACTGCACGGTaGGCATGTCCTCACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYRYATMLMCVFMPHSKLCRTAR*ACPHSG Trigger: GCCAGAGTGAGGACATGCTCACCGTGCAGTCCTACA...TAGTTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCAACAGGTAGATGCCATGATGGGCTTTTAAGATCTGTATTTTCACAAGATGGCAGTCCGTACACCTaGGCCAGGCGGTACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRCHDGLLRSVFSQDGSPYT*ARRYSS Trigger: GGAGCTGTACCGCCTGGCGCAGGTGTACGGACTGCC...ATCTTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAAAGAAACATTTTCCTCTGTTCTCCCAGTATAGAGCTACAGTATCCTCGCAGCGGGAATTGCGGCTaGCACAGCACCTGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKRNIFLCSPSIELQYPRSGNCG*HSTWWK Trigger: CTTCCACCAGGTGCTGTGTCAGCCGCAATTCCCGCT...GCGAGGATACTGTAGCTCTATACTGGGAGAACAGAGGAAAATGTTTCTTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | CCGATCGCCAAAAGGAATGTCCCTTCTGAGGAGATCTCAGGTGACCTGAAGAAATGTAACCACCCACGATaGAGAGGTAGTTGTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PIAKRNVPSEEISGDLKKCNHPR*RGSCPK Trigger: TTTTGGACAACTACCTCTTCATCGTGGGTGGTTACA...TTTCTTCAGGTCACCTGAGATCTCCTCAGAAGGGACATTCCTTTTGGCGATCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAAGGCGTAAACGTACCAGCGCTGAGCTTACTCGTGCCAAATCTTCACCTTGATGGCGTAAAGCTTTaGATTGACAGCCACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGVNVPALSLLVPNLHLDGVKL*IDSHKF Trigger: AAACTTGTGGCTGTCAATTCAAAGCTTTACGCCATC...AAGGTGAAGATTTGGCACGAGTAAGCTCAGCGCTGGTACGTTTACGCCTTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGAAAGCTTATTTACAGCTGAGCCGCCTACATACGTGACCTACGTTAGCTGCTGCTTGCGGATATaGACGTCACAGGTCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQESLFTAEPPTYVTYVSCCLRI*TSQVSN Trigger: GTTTGAGACCTGTGACGTCCATATCCGCAAGCAGCA...GCTAACGTAGGTCACGTATGTAGGCGGCTCAGCTGTAAATAAGCTTTCTTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGTTCTTGGCGTTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTTCAAAGATGTTGTACTTaGGAAACACTCGGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWVLGVRNNRTQQGQGLFQRCCT*ETLGAP Trigger: TGGAGCACCGAGTGTTTCTCAAGTACAACATCTTTG...AAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | ATCAAGCTAGGAGAAAACCTAAGTAAATGTGCAAACGTTGGTTTGGTTTGGTTTTTGCCCAGACGCACGTaGGACAGCAGCAAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKLGENLSKCANVGLVWFLPRRT*DSSKRR Trigger: TCTGCGCTTGCTGCTGTCGCACGTGCGTCTGGGCAA...AAACCAAACCAAACCAACGTTTGCACATTTACTTAGGTTTTCTCCTAGCTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AGACATCAGGGCCCCTTCTATTTACCTCTTTGGCCAAACAGGCTTATAACTTTCCGTAAATCTTCCCCTTaGACTCGCAGGCAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RHQGPFYLPLWPNRLITFRKSSP*TRRQRT Trigger: AGTTCTCTGCCTGCGAGTGCAAGGGGAAGATTTACG...GAAAGTTATAAGCCTGTTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAGAGAATGGAAAGAAATACGAAGTATCGCATAAGGAGTTGTCTGAGGCGGAGGGGCAGTACTaGAGGATGTTCATGTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KATENGKKYEVSHKELSEAEGQY*RMFMLR Trigger: TCGCAACATGAACATCCTGCAGTACTGCCCCTCCGC...CTCAGACAACTCCTTATGCGATACTTCGTATTTCTTTCCATTCTCTGTTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | GCACACAGGCTACATGTTAAGCCTGGGGTGAGAGCTTaGTGGATGTCAGTGTTAGAACTTCATTTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AHRLHVKPGVRA*WMSVLELHLVQ Trigger: TTGGACCAAATGAAGTTCTAACACTGACATCCACAAAGCTCTCACCCCAGGCTTAACATGTAGCCTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | CAGTATAGAGCTACAGTATCCTCGCCTTCCCTCTGCTaGAACGGAAACCTAAGGCATTTAAGTTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYRATVSSPSLC*NGNLRHLSLLG Trigger: CCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAGAGGGAAGGCGAGGATACTGTAGCTCTATACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAGAGAATGGAAAGAAATACGAAGTATCGCATAAGGAGTTGTCTGAGACACCATCTGCTGCTTaGGGATATGGACGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KATENGKKYEVSHKELSETPSAA*GYGRHR Trigger: CCTGTGACGTCCATATCCGCAAGCAGCAGATGGTGT...CTCAGACAACTCCTTATGCGATACTTCGTATTTCTTTCCATTCTCTGTTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAGAGAATGGAAAGAAATACGAAGTATCGCATAAGGAGTTGTCTGAGTTGAGAAACACTCGGTaGTCCAAGCTGGTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KATENGKKYEVSHKELSELRNTR*SKLVDR Trigger: CCTGTCCACCAGCTTGGAGCACCGAGTGTTTCTCAA...CTCAGACAACTCCTTATGCGATACTTCGTATTTCTTTCCATTCTCTGTTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAGTCTACTTTTTAATGGTGGGTTTTAGCTGTTGGTCCAAGACTGTTAGGAAGTTAGATCGCTTCTaGTTCATGGAGGCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAVYFLMVGFSCWSKTVRKLDRF*FMEATC Trigger: GCAGGTGGCCTCCATGAACCAGAAGCGATCTAACTT...CCTAACAGTCTTGGACCAACAGCTAAAACCCACCATTAAAAAGTAGACTGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCAACAGGTAGATGCCATGATGGGCTTTTAAGATCTGTATTTTCACAAGATAGAGCCACTGACGCGTaGCTGTGTTGTAGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRCHDGLLRSVFSQDRATDA*LCCRTA Trigger: TGCAGTCCTACAACACAGTCACGCGTCAGTGGCTCT...ATCTTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | AACGGAAACCTAAGGCATTTAAGTTTGCTTGGGTTCTaGGCGTTAGAAACAACAGAACACAGCAGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGNLRHLSLLGF*ALETTEHSRVK Trigger: CTTGACCCTGCTGTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | TCCCTCTGCTTGAACGGAAACCTAAGGCATTTAAGTTaGCTTGGGTTCTTGGCGTTAGAAACAACAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCLNGNLRHLS*LGFLALETTEH Trigger: GTGTTCTGTTGTTTCTAACGCCAAGAACCCAAGCAAACTTAAATGCCTTAGGTTTCCGTTCAAGCAGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCAACAGGTAGATGCCATGATGGGCTTTTAAGATCTGTATTTTCACAAGATACGGACACCATCTGCTaGTTGCGGATATGGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRCHDGLLRSVFSQDTDTIC*LRIWTS Trigger: TGACGTCCATATCCGCAAGCAGCAGATGGTGTCCGT...ATCTTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCAACAGGTAGATGCCATGATGGGCTTTTAAGATCTGTATTTTCACAAGATCTCAGCCAGAGGGTTTaGCAGGGGAGCCACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRCHDGLLRSVFSQDLSQRV*QGSHKI Trigger: AATTTTGTGGCTCCCCTGCCAAACCCTCTGGCTGAG...ATCTTGTGAAAATACAGATCTTAAAAGCCCATCATGGCATCTACCTGTTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAGATCAAGCTAGGAGAAAACCTAAGTAAATGTGCAAACGTTGGTTTGGTTAGTTCAGGCCCGATTTaGACGTGTTCTCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKIKLGENLSKCANVGLVSSGPI*TCSPSG Trigger: ACCTGAAGGAGAACACGTCCAAATCGGGCCTGAACT...AACCAAACCAACGTTTGCACATTTACTTAGGTTTTCTCCTAGCTTGATCTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | TTAGAAACAACAGAACACAGCAGGGTCAAGGTCTCTTaGGTTTCATGCTTAATCCTAAGCCGTATGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LETTEHSRVKVS*VSCLILSRMRF Trigger: GAAACGCATACGGCTTAGGATTAAGCATGAAACCAAAGAGACCTTGACCCTGCTGTGTTCTGTTGTTTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | TTGACAAAGACATCAGGGCCCCTTCTATTTACCTCTTaGGCCAAACAGGCTTATAACTTTCCCTGGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTKTSGPLLFTS*AKQAYNFPWNY Trigger: ATAATTCCAGGGAAAGTTATAAGCCTGTTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCTTTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | GTCAAGTGGCAGCTGGCAGTCACTATGTATTTCCTGTaGTGTTTCCAAACTAACGAAAGTGAAAAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VKWQLAVTMYFL*CFQTNESEKQT Trigger: TGTTTGCTTTTCACTTTCGTTAGTTTGGAAACACAACAGGAAATACATAGTGACTGCCAGCTGCCACTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| 3UTR CAA 72 bp | TGGTGGGTTTTAGCTGTTGGTCCAAGACTGTTAGGTTaGGATGAATATCATGATATTTGTTCCCATGATACA | + |
|
Preference number: 4 (lower is better) Translates to: WWVLAVGPRLLG*DEYHDICSHDT Trigger: TGTATCATGGGAACAAATATCATGATATTCATCCAAACCTAACAGTCTTGGACCAACAGCTAAAACCCACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036003.8 ENSMUST00000203441.2 |
||
| CDS GCA 90 bp | AAGTCCAGCACCAGCCGCAGGCCCGGAGCGCTCAGGCCGCGCAGCTaGTGCACCTCCGGGCCCACCTCGGGCCGCACGGCCTCGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: KSSTSRRPGALRPRS*CTSGPTSGRTASRM Trigger: CATGCGCGAGGCCGTGCGGCCCGAGGTGGGCCCGGAGGTGCAGCAGCTGCGCGGCCTGAGCGCTCCGGGCCTGCGGCTGGTGCTGGACTT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | GCTGCTGCACCTCCGGGCCCACCTCGGGCCGCACGGCCTCGCGCATaGCGGAGCGGTAGAGCGCGCGGAAGTAGTCGCTCTGTTCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAPPGPPRAARPRA*RSGRARGSSRSVRS Trigger: TGATCGAACAGAGCGACTACTTCCGCGCGCTCTACCGCTCCGGCATGCGCGAGGCCGTGCGGCCCGAGGTGGGCCCGGAGGTGCAGCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 90 bp | TCCCCGGGGGCCTGCGGCGGCGACAACAGTAGCGGGAATTGCGGCTaGCACAGCACCTGGTGGAAGCGCAGCACCATGAAGCGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGACGGDNSSGNCG*HSTWWKRSTMKRRQ Trigger: CTGCCTGCGCTTCATGGTGCTGCGCTTCCACCAGGTGCTGTGTCAGCCGCAATTCCCGCTACTGTTGTCGCCGCCGCAGGCCCCCGGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 90 bp | GCGGGAATTGCGGCTGACACAGCACCTGGTGGAAGCGCAGCACCATaGAGCGCAGGCAGGCGTCCTGCAGGTCGGGCAGTCCGTACACCT | + |
|
Preference number: 5 (lower is better) Translates to: AGIAADTAPGGSAAP*SAGRRPAGRAVRTP Trigger: AGGTGTACGGACTGCCCGACCTGCAGGACGCCTGCCTGCGCTTCATGGTGCTGCGCTTCCACCAGGTGCTGTGTCAGCCGCAATTCCCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | CCCAGACGCACGTGCGACAGCAGCAAGCGCAGAAGCGCCGTGACCTaGAGAAAGGACGCGGCCTCCACCATCTCGGACAGCACACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRTCDSSKRRSAVT*RKDAASTISDSTLA Trigger: GGCTAGTGTGCTGTCCGAGATGGTGGAGGCCGCGTCCTTTCTGCAGGTCACGGCGCTTCTGCGCTTGCTGCTGTCGCACGTGCGTCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 90 bp | AGTTGCCCAGACGCACGTGCGACAGCAGCAAGCGCAGAAGCGCCGTaGCCTGCAGAAAGGACGCGGCCTCCACCATCTCGGACAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SCPDARATAASAEAP*PAERTRPPPSRTAH Trigger: GTGTGCTGTCCGAGATGGTGGAGGCCGCGTCCTTTCTGCAGGTCACGGCGCTTCTGCGCTTGCTGCTGTCGCACGTGCGTCTGGGCAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | CGGAGCGGTAGAGCGCGCGGAAGTAGTCGCTCTGTTCGATCAGCTTaGTCTTGCTCACCGGGTAGCAGCGGTCTTCCAGGCGGATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGRARGSSRSVRSA*SCSPGSSGLPGGSA Trigger: TGCAGATCCGCCTGGAAGACCGCTGCTACCCGGTGAGCAAGAGCAAGCTGATCGAACAGAGCGACTACTTCCGCGCGCTCTACCGCTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | GGTAGAGCGCGCGGAAGTAGTCGCTCTGTTCGATCAGCTTGCTCTTaGTCACCGGGTAGCAGCGGTCTTCCAGGCGGATCTGCACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GRARGSSRSVRSACS*SPGSSGLPGGSAPS Trigger: AGATGGTGCAGATCCGCCTGGAAGACCGCTGCTACCCGGTGAGCAAGAGCAAGCTGATCGAACAGAGCGACTACTTCCGCGCGCTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | GGAGGCCACCTGCAGCCACTCGTTGGTGATGGGATTGTAGGAGTGTaGGGCAGAGATCTCCTGGCTGGTGATCCTGTAACCACCCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGHLQPLVGDGIVGV*GRDLLAGDPVTTHD Trigger: ATCGTGGGTGGTTACAGGATCACCAGCCAGGAGATCTCTGCCGCACACTCCTACAATCCCATCACCAACGAGTGGCTGCAGGTGGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CCA 90 bp | TGCGGTTGGGCCCCAGTTCATGGAGACACCCACCCACGATGTAGATaGTCTCCTCCACGGACACCATCTGCTGCTTGCGGATATGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: CGWAPVHGDTHPRCR*SPPRTPSAACGYGR Trigger: ACGTCCATATCCGCAAGCAGCAGATGGTGTCCGTGGAGGAGACCATCTACATCGTGGGTGGGTGTCTCCATGAACTGGGGCCCAACCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGTGGGCAGTGGGCCCAGTGTGCCTGACTAAAGTGGGCATCTCTGACTACGACACCATCTGCTGCTaGCGGATATGGACGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RQWAVGPVCLTKVGISDYDTICC*RIWTSQ Trigger: CTGTGACGTCCATATCCGCAAGCAGCAGATGGTGTC...GTAGTCAGAGATGCCCACTTTAGTCAGGCACACTGGGCCCACTGCCCACTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGGAGTCTGTGCATCTAAACCCCAGAGCCATATACTGCACACAGGCTACTGGCTGCTCCTGCGGTaGGGCCCCAGTTCATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLGVCASKPQSHILHTGYWLLLR*GPSSWR Trigger: TCTCCATGAACTGGGGCCCAACCGCAGGAGCAGCCA...GTAGCCTGTGTGCAGTATATGGCTCTGGGGTTTAGATGCACAGACTCCCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | TCACAGGTCTCAAACAGCGTCCAGAGGTCGGCGGAGGGGCAGTACTaGAGGATGTTCATGTTGCGATCTCGGGTGGTATATCCGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SQVSNSVQRSAEGQY*RMFMLRSRVVYPPM Trigger: CATTGGCGGATATACCACCCGAGATCGCAACATGAACATCCTGCAGTACTGCCCCTCCGCCGACCTCTGGACGCTGTTTGAGACCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGCTAGAACCCCTCAGAAGCTGGTGGTAGGGGGAGTAAGGCAACAGAGAAAGTTCAGGCCCGATTaGGACGTGTTCTCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGARTPQKLVVGGVRQQRKFRPD*DVFSFR Trigger: CCTGAAGGAGAACACGTCCAAATCGGGCCTGAACTT...TCTCTGTTGCCTTACTCCCCCTACCACCAGCTTCTGAGGGGTTCTAGCTCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 90 bp | CAGGGTGACGTCCCTGCTCATAATGTAGATGCCGTCATTGTGCAGTaGGCATGTCAAGTTCAGGCCCGATTTGGACGTGTTCTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGDVPAHNVDAVIVQ*ACQVQARFGRVLLQ Trigger: CTGAAGGAGAACACGTCCAAATCGGGCCTGAACTTGACATGCGCACTGCACAATGACGGCATCTACATTATGAGCAGGGACGTCACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 90 bp | ACTGCAGGATGTTCATGTTGCGATCTCGGGTGGTATATCCGCCAATaGCGTAAATCTTCCCCTTGCACTCGCAGGCAGAGAACTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TAGCSCCDLGWYIRQ*RKSSPCTRRQRTQP Trigger: TGGCTGAGTTCTCTGCCTGCGAGTGCAAGGGGAAGATTTACGTCATTGGCGGATATACCACCCGAGATCGCAACATGAACATCCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | CCCGCTCTGTCCCTTCAGGAGTCAGGACTTCAAAGGCTTGCTTTTTCCCCCTTGCTGTCAGCAAAGATGTaGTACTTGAGAAACACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PALSLQESGLQRLAFSPLLSAKM*YLRNTR Trigger: CCGAGTGTTTCTCAAGTACAACATCTTTGCTGACAG...CAAGGGGGAAAAAGCAAGCCTTTGAAGTCCTGACTCCTGAAGGGACAGAGCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CCA 90 bp | ATTGGGCAGATAGAGAGAGGAAATCAACAAGTTATGTCCGAAAGCTaGGAACCGCCGGAAGGCTTCCCAGCTGTCAGCAAAGATGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IGQIERGNQQVMSES*EPPEGFPAVSKDVV Trigger: TACAACATCTTTGCTGACAGCTGGGAAGCCTTCCGGCGGTTCCCAGCTTTCGGACATAACTTGTTGATTTCCTCTCTCTATCTGCCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | CCGATCGCCAAAAGGAATGTCCCTTCTGAGGAGATCTCAGGTGACCTGAAGAAAGCAAAGATGTTGTACTaGAGAAACACTCGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PIAKRNVPSEEISGDLKKAKMLY*RNTRCS Trigger: GGAGCACCGAGTGTTTCTCAAGTACAACATCTTTGC...TTTCTTCAGGTCACCTGAGATCTCCTCAGAAGGGACATTCCTTTTGGCGATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 90 bp | GCATTCCACGTTAGAAACAGCCTGCCCACCGATGGCGTAAAGCTTTaGATTGACAGCCACAAGTTTGAAGTTAGATCGCTTCTGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFHVRNSLPTDGVKL*IDSHKFEVRSLLVH Trigger: ATGAACCAGAAGCGATCTAACTTCAAACTTGTGGCTGTCAATTCAAAGCTTTACGCCATCGGTGGGCAGGCTGTTTCTAACGTGGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGATCAAGCTAGGAGAAAACCTAAGTAAATGTGCAAACGTTGGTTTGGTTACTCAGCCAGAGGGTTaGGCAGGGGAGCCACAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AKIKLGENLSKCANVGLVTQPEG*AGEPQN Trigger: ATTTTGTGGCTCCCCTGCCAAACCCTCTGGCTGAGT...AACCAAACCAACGTTTGCACATTTACTTAGGTTTTCTCCTAGCTTGATCTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAATCTAGTTGCTGGCATTAGGAAATATGTCCAAAGATGGCCATCAGGATTGACAGCCACAAGTTaGAAGTTAGATCGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKNLVAGIRKYVQRWPSGLTATS*KLDRFW Trigger: CCAGAAGCGATCTAACTTCAAACTTGTGGCTGTCAA...TCCTGATGGCCATCTTTGGACATATTTCCTAATGCCAGCAACTAGATTCTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGATCAAGCTAGGAGAAAACCTAAGTAAATGTGCAAACGTTGGTTTGGTTAAAATTCCACGCATCTaGCTCGGGATTGTAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: AKIKLGENLSKCANVGLVKIPRI*LGIVAF Trigger: GAATGCTACAATCCCGAGCAAGATGCGTGGAATTTT...AACCAAACCAACGTTTGCACATTTACTTAGGTTTTCTCCTAGCTTGATCTTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | CCTCCGGGCCCACCTCGGGCCGCACGGCCTCGCGCATaGCGGAGCGGTAGAGCGCGCGGAAGTAGTCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGPPRAARPRA*RSGRARGSSRS Trigger: AGAGCGACTACTTCCGCGCGCTCTACCGCTCCGGCATGCGCGAGGCCGTGCGGCCCGAGGTGGGCCCGGAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CAA 90 bp | TCGGGCAGTCCGTACACCTGCGCCAGGCGGTACAGCTCCAGGCAGTaGCCCAGACGCACGTGCGACAGCAGCAAGCGCAGAAGCGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSPYTCARRYSSRQ*PRRTCDSSKRRSAV Trigger: CACGGCGCTTCTGCGCTTGCTGCTGTCGCACGTGCGTCTGGGCAACTGCCTGGAGCTGTACCGCCTGGCGCAGGTGTACGGACTGCCCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | ACGTGCGACAGCAGCAAGCGCAGAAGCGCCGTGACCTaGAGAAAGGACGCGGCCTCCACCATCTCGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TCDSSKRRSAVT*RKDAASTISDS Trigger: GCTGTCCGAGATGGTGGAGGCCGCGTCCTTTCTGCAGGTCACGGCGCTTCTGCGCTTGCTGCTGTCGCACGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | CGTACACCTGCGCCAGGCGGTACAGCTCCAGGCAGTTaGCCAGACGCACGTGCGACAGCAGCAAGCGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTPAPGGTAPGS*PDARATAASAE Trigger: TTCTGCGCTTGCTGCTGTCGCACGTGCGTCTGGGCAACTGCCTGGAGCTGTACCGCCTGGCGCAGGTGTACG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 72 bp | GCCTGCGGCGGCGACAACAGTAGCGGGAATTGCGGCTaGCACAGCACCTGGTGGAAGCGCAGCACCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ACGGDNSSGNCG*HSTWWKRSTMK Trigger: CTTCATGGTGCTGCGCTTCCACCAGGTGCTGTGTCAGCCGCAATTCCCGCTACTGTTGTCGCCGCCGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | AGAGCGCGCGGAAGTAGTCGCTCTGTTCGATCAGCTTaGTCTTGCTCACCGGGTAGCAGCGGTCTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RARGSSRSVRSA*SCSPGSSGLPG Trigger: GCCTGGAAGACCGCTGCTACCCGGTGAGCAAGAGCAAGCTGATCGAACAGAGCGACTACTTCCGCGCGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CCA 72 bp | GCCCCAGTTCATGGAGACACCCACCCACGATGTAGATaGTCTCCTCCACGGACACCATCTGCTGCTTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: APVHGDTHPRCR*SPPRTPSAACG Trigger: TCCGCAAGCAGCAGATGGTGTCCGTGGAGGAGACCATCTACATCGTGGGTGGGTGTCTCCATGAACTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CAA 90 bp | GGGAACCGCCGGAAGGCTTCCCAGCTGTCAGCAAAGATGTTGTACTaGAGAAACACTCGGTGCTCCAAGCTGGTGGACAGGGTGACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GNRRKASQLSAKMLY*RNTRCSKLVDRVTS Trigger: GGACGTCACCCTGTCCACCAGCTTGGAGCACCGAGTGTTTCTCAAGTACAACATCTTTGCTGACAGCTGGGAAGCCTTCCGGCGGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CCA 72 bp | GTCTCCTCCACGGACACCATCTGCTGCTTGCGGATATaGACGTCACAGGTCTCAAACAGCGTCCAGAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSSTDTICCLRI*TSQVSNSVQRS Trigger: CGACCTCTGGACGCTGTTTGAGACCTGTGACGTCCATATCCGCAAGCAGCAGATGGTGTCCGTGGAGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS TCA 72 bp | TCTGGTTCATGGAGGCCACCTGCAGCCACTCGTTGGTaGTGGGATTGTAGGAGTGTGCGGCAGAGATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGSWRPPAATRW*WDCRSVRQRSP Trigger: AGGAGATCTCTGCCGCACACTCCTACAATCCCATCACCAACGAGTGGCTGCAGGTGGCCTCCATGAACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | CTGCAGCCACTCGTTGGTGATGGGATTGTAGGAGTGTaGGGCAGAGATCTCCTGGCTGGTGATCCTGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: LQPLVGDGIVGV*GRDLLAGDPVT Trigger: GGTTACAGGATCACCAGCCAGGAGATCTCTGCCGCACACTCCTACAATCCCATCACCAACGAGTGGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CAA 72 bp | CCTTGCACTCGCAGGCAGAGAACTCAGCCAGAGGGTTaGGCAGGGGAGCCACAAAATTCCACGCATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCTRRQRTQPEG*AGEPQNSTHLA Trigger: AGCAAGATGCGTGGAATTTTGTGGCTCCCCTGCCAAACCCTCTGGCTGAGTTCTCTGCCTGCGAGTGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CAA 90 bp | AAAGCTGGGAACCGCCGGAAGGCTTCCCAGCTGTCAGCAAAGATGTaGTACTTGAGAAACACTCGGTGCTCCAAGCTGGTGGACAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KAGNRRKASQLSAKM*YLRNTRCSKLVDRV Trigger: CACCCTGTCCACCAGCTTGGAGCACCGAGTGTTTCTCAAGTACAACATCTTTGCTGACAGCTGGGAAGCCTTCCGGCGGTTCCCAGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | TCAAACAGCGTCCAGAGGTCGGCGGAGGGGCAGTACTaGAGGATGTTCATGTTGCGATCTCGGGTGGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: SNSVQRSAEGQY*RMFMLRSRVVY Trigger: ATATACCACCCGAGATCGCAACATGAACATCCTGCAGTACTGCCCCTCCGCCGACCTCTGGACGCTGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | TGTAGATGGTCTCCTCCACGGACACCATCTGCTGCTTaGGGATATGGACGTCACAGGTCTCAAACAGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRWSPPRTPSAA*GYGRHRSQTAS Trigger: GGACGCTGTTTGAGACCTGTGACGTCCATATCCGCAAGCAGCAGATGGTGTCCGTGGAGGAGACCATCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CCA 72 bp | CATTGTGCAGTGCGCATGTCAAGTTCAGGCCCGATTTaGACGTGTTCTCCTTCAGGTAGAGCCACTGACGCG | + |
|
Preference number: 6 (lower is better) Translates to: HCAVRMSSSGPI*TCSPSGRATDA Trigger: CGCGTCAGTGGCTCTACCTGAAGGAGAACACGTCCAAATCGGGCCTGAACTTGACATGCGCACTGCACAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | CTGTCAGCAAAGATGTTGTACTTGAGAAACACTCGGTaGTCCAAGCTGGTGGACAGGGTGACGTCCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAKMLYLRNTR*SKLVDRVTSLL Trigger: GAGCAGGGACGTCACCCTGTCCACCAGCTTGGAGCACCGAGTGTTTCTCAAGTACAACATCTTTGCTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CAA 72 bp | AACCGCCGGAAGGCTTCCCAGCTGTCAGCAAAGATGTaGTACTTGAGAAACACTCGGTGCTCCAAGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NRRKASQLSAKM*YLRNTRCSKLV Trigger: CACCAGCTTGGAGCACCGAGTGTTTCTCAAGTACAACATCTTTGCTGACAGCTGGGAAGCCTTCCGGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS GCA 72 bp | GTCCCTGCTCATAATGTAGATGCCGTCATTGTGCAGTaGGCATGTCAAGTTCAGGCCCGATTTGGACGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VPAHNVDAVIVQ*ACQVQARFGRV Trigger: AACACGTCCAAATCGGGCCTGAACTTGACATGCGCACTGCACAATGACGGCATCTACATTATGAGCAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CAA 72 bp | AGGGTTTGGCAGGGGAGCCACAAAATTCCACGCATCTaGCTCGGGATTGTAGCATTCCACGTTAGAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVWQGSHKIPRI*LGIVAFHVRNS Trigger: GCTGTTTCTAACGTGGAATGCTACAATCCCGAGCAAGATGCGTGGAATTTTGTGGCTCCCCTGCCAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||
| CDS CCA 72 bp | ATAGAGAGAGGAAATCAACAAGTTATGTCCGAAAGCTaGGAACCGCCGGAAGGCTTCCCAGCTGTCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IERGNQQVMSES*EPPEGFPAVSK Trigger: TTTGCTGACAGCTGGGAAGCCTTCCGGCGGTTCCCAGCTTTCGGACATAACTTGTTGATTTCCTCTCTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036003.8 |
||