Pregenerated sensors for KLHL41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075307Ensembl transcript IDs: ENSMUST00000100050.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGCTCACTTCTTTaGGAAAGGTTTAACAAAATATATTGTTCAAGCCGGGCGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: YKGLVNSSDVESSLL*ERFNKIYCSSRAWW Trigger: CCACCACGCCCGGCTTGAACAATATATTTTGTTAAACCTTTCTCAAAGAAGTGAGCTTTCTACATCGGAGCTGTTTACTAACCCTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| 3UTR CCA 90 bp | AGTCATCTTCATTATAATGCACAAGATTCCTGTTGTAGCTCAAAGTaGGGAAAGGTTTCCGTTATTCAAACATTTCTTAAGAATGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: SHLHYNAQDSCCSSK*GKVSVIQTFLKNVD Trigger: GTCTACATTCTTAAGAAATGTTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCATTATAATGAAGATGACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| 3UTR TCA 72 bp | GATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTaGATCCCTGTAACCCTATGTGAATCATTGTATAGG | + |
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Preference number: 3 (lower is better) Translates to: DSVTLFYPRETA*IPVTLCESLYR Trigger: CCTATACAATGATTCACATAGGGTTACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| 3UTR CCA 72 bp | CTGAATACTAAACTTCCTAGCAAATGGTTTTATACTTaGCACACTGAAAATCTCTGGGATTCGGTTACACTG | + |
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Preference number: 3 (lower is better) Translates to: LNTKLPSKWFYT*HTENLWDSVTL Trigger: CAGTGTAACCGAATCCCAGAGATTTTCAGTGTGCCAAGTATAAAACCATTTGCTAGGAAGTTTAGTATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| 3UTR TCA 72 bp | TTAGTAAACAGCTCCGATGTAGAAAGCTCACTTCTTTaGGAAAGGTTTAACAAAATATATTGTTCAAGCCGG | + |
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Preference number: 3 (lower is better) Translates to: LVNSSDVESSLL*ERFNKIYCSSR Trigger: CCGGCTTGAACAATATATTTTGTTAAACCTTTCTCAAAGAAGTGAGCTTTCTACATCGGAGCTGTTTACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| 3UTR CCA 72 bp | CATTATAATGCACAAGATTCCTGTTGTAGCTCAAAGTaGGGAAAGGTTTCCGTTATTCAAACATTTCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: HYNAQDSCCSSK*GKVSVIQTFLK Trigger: CTTAAGAAATGTTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCATTATAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTAAGCCGGAGTTCCTCTaGAAGCTCCCGCTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCKPEFL*KLPLGI Trigger: GATTCCCAGCGGGAGCTTGCAGAGGAACTCCGGCTT...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCACTCCCGGGCAGAAATaGCAAGTCTCGGGCAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPTPGQK*QVSGSR Trigger: TCGACTGCCCGAGACTTGCCATTTCTGCCCGGGAGT...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTGACTGGAATGGTTTCTaGGGATCTGCTCTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCDWNGF*GSALPG Trigger: CCCTGGCAGAGCAGATCCCCAGAAACCATTCCAGTC...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAAAAGAGACACCTGGCTaGTGGGAGAGGCGGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKKETPG*WERRKS Trigger: GGACTTCCGCCTCTCCCATCAGCCAGGTGTCTCTTT...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAAGTGAGGCCTCTGTTTaGAGGTCTTTGCCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKSEASV*RSLPAT Trigger: GGTGGCCGGCAAAGACCTTCAAACAGAGGCCTCACT...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAACGCCCCTGCCTTCTCTaGATTTTTGCTGGGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKRPCLL*IFAGFR Trigger: CCGGAACCCAGCAAAAATGCAGAGAAGGCAGGGGCG...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCCACTTCACTCCACTTTaGAGCCACAGGATCGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPHFTPL*SHRIVA Trigger: TGCTACGATCCTGTGGCTGCAAAGTGGAGTGAAGTG...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTCATCCTGAAGAAGGGTaGATTGGTAAAGCCGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCHPEEG*IGKAGV Trigger: AACTCCGGCTTTACCAATCCACCCTTCTTCAGGATG...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCCTTGCCTTTATGGATTaGCACGCCAAACATGGAACG | + |
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Preference number: 4 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPLAFMD*HAKHGT Trigger: CGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAG...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAGCCCCAATCTTAGGATaGCCAGACAGTTACCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKAPILG*PDSYRE Trigger: CTCCCGGTAACTGTCTGGCCATCCTAAGATTGGGGC...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTCTTTAGATTCCAGCTaGATCATCGCAAAGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPSLDSS*IIAKPP Trigger: CGGTGGCTTTGCGATGATCCAGCTGGAATCTAAAGA...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTTTAGGGTGCAATCGATaGACTTTTTCTCTTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCLGCNR*TFSLPG Trigger: TCCTGGAAGAGAAAAAGTTCATCGATTGCACCCTAA...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTTTAACAAACATTCCATaGCTGGGGATATCGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCLTNIP*LGISFR Trigger: CCTGAACGATATCCCCAGGCATGGAATGTTTGTTAA...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGTCTGGGGATCTGCTCTaGCAGGGCAGTAAGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKSGDLL*QGSKVA Trigger: TGCTACCTTACTGCCCTGGCAGAGCAGATCCCCAGA...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | TGGGGAAAGGTTTCCGTTATTCAAACATTTCTTAAGAATGTAGACAGATGCATTGGCCAAAGAGACACCTaGCTGATGGGAGAGGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: WGKVSVIQTFLKNVDRCIGQRDT*LMGEAE Trigger: TTCCGCCTCTCCCATCAGCCAGGTGTCTCTTTGGCC...AATGCATCTGTCTACATTCTTAAGAAATGTTTGAATAACGGAAACCTTTCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCGCACATTCCCATCATTaGGATCGATACTGGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVAHSHH*DRYWQS Trigger: ACTCTGCCAGTATCGATCTCAATGATGGGAATGTGC...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCGTTGAGGCTGTCGTTTaGAATGACGGAGATCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVVEAVV*NDGDQF Trigger: GAACTGATCTCCGTCATTTCAAACGACAGCCTCAAC...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAAAAGACCATCTTCAGTaGCACCTCCTGCGATCACAA | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKKDHLQ*HLLRSQ Trigger: TTGTGATCGCAGGAGGTGTCACTGAAGATGGTCTTT...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTCTTGTGGGGACAGTTaGATGAAATCTTCTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPSCGDS*MKSSSL Trigger: TAAGGAAGAAGATTTCATGCAACTGTCCCCACAAGA...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTGATAGTATCAGTCTGTaGCAAGGAAAACTTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCDSISL*QGKLLS Trigger: TGACAAAAGTTTTCCTTGCCACAGACTGATACTATC...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCTCTCTGCATTTTTGCTaGGTTCCGGAAGTTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVSLHFC*VPEVCL Trigger: CAGGCAAACTTCCGGAACCCAGCAAAAATGCAGAGA...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCAGCACTCATTTTCCATaGGGTCATACGCTACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVSTHFP*GHTLLQ Trigger: CTGCAGTAGCGTATGACCCCATGGAAAATGAGTGCT...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCCTGTTTGAAGGTCTTTaGCGGCCACCACATAGATTT | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVLFEGL*RPPHRF Trigger: AAATCTATGTGGTGGCCGGCAAAGACCTTCAAACAG...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCTTCAGTGACACCTCCTaGGATCACAATCTTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVFSDTS*DHNLAF Trigger: AAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGAA...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAGGAGATCAGTTCTTGTaGGGACAGTTGCATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKGDQFL*GQLHEI Trigger: GATTTCATGCAACTGTCCCCACAAGAACTGATCTCC...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAGTGGGGACAGTTGCATaGAATCTTCTTCCTTACAAA | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKVGTVA*NLLPYK Trigger: TTTGTAAGGAAGAAGATTTCATGCAACTGTCCCCAC...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGGGCTGTCGTTTGAAATaGCGGAGATCAGTTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKGCRLK*RRSVLV Trigger: CACAAGAACTGATCTCCGTCATTTCAAACGACAGCC...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAAACTTCCATATGTCATTaGCTTCAGTGGGTGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: MHKIPVVAQSGERFPLFKTSICH*LQWVQT Trigger: AGTTTGCACCCACTGAAGTCAATGACATATGGAAGT...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGCCTTCTCTGCATTTTTaGTGGGTTCCGGAAGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKPSLHF*WVPEVC Trigger: GCAAACTTCCGGAACCCAGCAAAAATGCAGAGAAGG...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGTACGATTGCAGGGGTTaGTCCTTATTTTCTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKYDCRG*SLFSSS Trigger: GGACGAAGAAAATAAGGATCAACCCCTGCAATCGTA...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCTCTTCCTTACAAATCTaGACAAAGCGATCAGACACA | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVSSLQI*TKRSDT Trigger: TGTGTCTGATCGCTTTGTGCAGATTTGTAAGGAAGA...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | TGGGGAAAGGTTTCCGTTATTCAAACATTTCTTAAGAATGTAGACAGATGCATTCTGCGATCACAATCTTaGCTTTATGGATTGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: WGKVSVIQTFLKNVDRCILRSQS*LYGLPR Trigger: GCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAG...AATGCATCTGTCTACATTCTTAAGAAATGTTTGAATAACGGAAACCTTTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCATTGACTTCAGTGGGTaGAAACTCTTTAGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVIDFSG*KLFRFQ Trigger: CTGGAATCTAAAGAGTTTGCACCCACTGAAGTCAAT...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGCAAACATTCCATGCCTaGGGATATCGTTCAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKQTFHA*GYRSGN Trigger: GTTACCTGAACGATATCCCCAGGCATGGAATGTTTG...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR TCA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCTATCATCCCATTGTGTaGAATCACATTATGGCCATA | + |
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Preference number: 4 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVYHPIV*NHIMAI Trigger: TATGGCCATAATGTGATTTCACACAATGGGATGATA...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR GCA 90 bp | TGGGGAAAGGTTTCCGTTATTCAAACATTTCTTAAGAATGTAGACAGATGCATTAGGGCGAAGATGTCTTaGACATTCCCATCATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: WGKVSVIQTFLKNVDRCIRAKMS*TFPSLR Trigger: TCTCAATGATGGGAATGTGCAAGACATCTTCGCCCT...AATGCATCTGTCTACATTCTTAAGAAATGTTTGAATAACGGAAACCTTTCCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS-3UTR CCA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGATAGAACTTCTTTCTTaGGGAAATTCCGTCATCACT | + |
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Preference number: 4 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKIELLS*GNSVIT Trigger: AGTGATGACGGAATTTCCCCAAGAAAGAAGTTCTAT...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS CCA 90 bp | TACAAATCTGCACAAAGCGATCAGACACAAACTCCCGGGCAGAAATaGCAAGTCTCGGGCAGTCGAGAAGCAGCCCCAATCTTAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: YKSAQSDQTQTPGQK*QVSGSREAAPILGW Trigger: CCATCCTAAGATTGGGGCTGCTTCTCGACTGCCCGAGACTTGCCATTTCTGCCCGGGAGTTTGTGTCTGATCGCTTTGTGCAGATTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS GCA 90 bp | CGTAGCATAGCACGGAATCCAGTGAGGCCTCTGTTTGAAGGTCTTTaGCGGCCACCACATAGATTTTGTCATCTACTTCTCCCAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: RSIARNPVRPLFEGL*RPPHRFCHLLLPGQ Trigger: TTGGCCTGGGAGAAGTAGATGACAAAATCTATGTGGTGGCCGGCAAAGACCTTCAAACAGAGGCCTCACTGGATTCCGTGCTATGCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS CCA 90 bp | AGACCATCTTCAGTGACACCTCCTGCGATCACAATCTTGCCTTTATaGATTGCCACGCCAAACATGGAACGAGGGGTTTTCATCGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RPSSVTPPAITILPL*IATPNMERGVFIGA Trigger: GGCTCCGATGAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGAAGATGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS TCA 90 bp | ATAGATTTTGTCATCTACTTCTCCCAGGCCAAAGAGACACCTGGCTaGTGGGAGAGGCGGAAGTCCGACCCACTCAGATGTTACGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: IDFVIYFSQAKETPG*WERRKSDPLRCYVI Trigger: GATAACGTAACATCTGAGTGGGTCGGACTTCCGCCTCTCCCATCAGCCAGGTGTCTCTTTGGCCTGGGAGAAGTAGATGACAAAATCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 90 bp | AACACCGACGGAATCTGGAAGCGGCTGGACAGGGCGAAGATGTCTTaGACATTCCCATCATTGAGATCGATACTGGCAGAGTACAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: NTDGIWKRLDRAKMS*TFPSLRSILAEYRY Trigger: ATATCTGTACTCTGCCAGTATCGATCTCAATGATGGGAATGTGCAAGACATCTTCGCCCTGTCCAGCCGCTTCCAGATTCCGTCGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 90 bp | ATCTTCAGTGACACCTCCTGCGATCACAATCTTGCCTTTATGGATTaGCACGCCAAACATGGAACGAGGGGTTTTCATCGGAGCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: IFSDTSCDHNLAFMD*HAKHGTRGFHRSQI Trigger: GATCTGGCTCCGATGAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 90 bp | CTCCTGCGATCACAATCTTGCCTTTATGGATTGCCACGCCAAACATaGAACGAGGGGTTTTCATCGGAGCCAGATCTTTCCAGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRSQSCLYGLPRQT*NEGFSSEPDLSSLL Trigger: AAGGAGACTGGAAAGATCTGGCTCCGATGAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTCTGAAGAAGGGTGGATaGGTAAAGCCGGAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCLKKGG*VKPEFL Trigger: GAGGAACTCCGGCTTTACCAATCCACCCTTCTTCAG...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 90 bp | ACTTTTTCTCTTCCAGGAGATCTTTTAGACCATCCTGAAGAAGGGTaGATTGGTAAAGCCGGAGTTCCTCTGCAAGCTCCCGCTGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TFSLPGDLLDHPEEG*IGKAGVPLQAPAGN Trigger: ATTCCCAGCGGGAGCTTGCAGAGGAACTCCGGCTTTACCAATCCACCCTTCTTCAGGATGGTCTAAAAGATCTCCTGGAAGAGAAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTACTGCAGCCGTGTCATaGACCAAGAGGATGAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCTAAVS*TKRMRS Trigger: AGATCTCATCCTCTTGGTCAATGACACGGCTGCAGT...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTCACTTCACTCCACTTaGCAGCCACAGGATCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPSLHST*QPQDRS Trigger: GCTACGATCCTGTGGCTGCAAAGTGGAGTGAAGTGA...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCTGTTGCACATTCCCATCATaGAGATCGATACTGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGFGYTVLPQRNCVNPCCTFPS*RSILAE Trigger: CTCTGCCAGTATCGATCTCAATGATGGGAATGTGCA...ACAGGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 90 bp | CAGGGCAGTAAGGTAGCACTCATTTTCCATGGGGTCATACGCTACTaGAGCCGTGTCATTGACCAAGAGGATGAGATCTTTAACAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: QGSKVALIFHGVIRY*SRVIDQEDEIFNKH Trigger: ATGTTTGTTAAAGATCTCATCCTCTTGGTCAATGACACGGCTGCAGTAGCGTATGACCCCATGGAAAATGAGTGCTACCTTACTGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS TCA 90 bp | GGCCTCAAATACTACTTCCTCCTTTTCTACGTTGAGGCTGTCGTTTaGAATGACGGAGATCAGTTCTTGTGGGGACAGTTGCATGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: GLKYYFLLFYVEAVV*NDGDQFLWGQLHEI Trigger: GATTTCATGCAACTGTCCCCACAAGAACTGATCTCCGTCATTTCAAACGACAGCCTCAACGTAGAAAAGGAGGAAGTAGTATTTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 90 bp | AGTTCTTGTGGGGACAGTTGCATGAAATCTTCTTCCTTACAAATCTaGACAAAGCGATCAGACACAAACTCCCGGGCAGAAATGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSCGDSCMKSSSLQI*TKRSDTNSRAEMAS Trigger: ACTTGCCATTTCTGCCCGGGAGTTTGTGTCTGATCGCTTTGTGCAGATTTGTAAGGAAGAAGATTTCATGCAACTGTCCCCACAAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCGTAGACCTGATTCTGTaGGGTAACAAGACTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPVDLIL*GNKTGM Trigger: CATTCCAGTCTTGTTACCCAACAGAATCAGGTCTAC...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 90 bp | AGGCTGTCGTTTGAAATGACGGAGATCAGTTCTTGTGGGGACAGTTaGATGAAATCTTCTTCCTTACAAATCTGCACAAAGCGATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSFEMTEISSCGDS*MKSSSLQICTKRSD Trigger: GTCTGATCGCTTTGTGCAGATTTGTAAGGAAGAAGATTTCATGCAACTGTCCCCACAAGAACTGATCTCCGTCATTTCAAACGACAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCATAGCAGGATCCACGTaGTCTAGGGCTACCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVIAGST*SRATSF Trigger: AAAGGAGGTAGCCCTAGACAACGTGGATCCTGCTAT...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAACCTGCGATCACAATCTaGCCTTTATGGATTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MHKIPVVAQSGERFPLFKPAITI*PLWIAT Trigger: CGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGG...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAATTTGCCCTGTTTTCTTaGTCTGTCCGCACCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: MHKIPVVAQSGERFPLFKFALFS*SVRTHF Trigger: GAAATGGGTGCGGACAGACAAAGAAAACAGGGCAAA...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGGACGGAGATCAGTTCTaGTGGGGACAGTTGCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKDGDQF*WGQLHE Trigger: TTCATGCAACTGTCCCCACAAGAACTGATCTCCGTC...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AAATCTCTGGGATTCGGTTACACTGTTTTACCCCAGAGAAACTGCGTGAATCCCCAGTATATCATCCCATaGTGTGAAATCACATTATGG | + |
|
Preference number: 5 (lower is better) Translates to: KSLGFGYTVLPQRNCVNPQYIIP*CEITLW Trigger: CCATAATGTGATTTCACACAATGGGATGATATACTG...GGGATTCACGCAGTTTCTCTGGGGTAAAACAGTGTAACCGAATCCCAGAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | ATGCACAAGATTCCTGTTGTAGCTCAAAGTGGGGAAAGGTTTCCGTTATTCAAACTGGAAAAAGTACGATaGCAGGGGTTGATCCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: MHKIPVVAQSGERFPLFKLEKVR*QGLILI Trigger: AATAAGGATCAACCCCTGCAATCGTACTTTTTCCAG...TTTGAATAACGGAAACCTTTCCCCACTTTGAGCTACAACAGGAATCTTGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGTCTTGCCTTTATGGATaGCCACGCCAAACATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKSCLYG*PRQTWN Trigger: GTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGA...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AATGACAATAAATTAAAGCCTCTTGTCCCAACAAGCCACCTCTCAAACTGTGTCGATAGAACTTCTTTCTaGGGGAAATTCCGTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: NDNKLKPLVPTSHLSNCVDRTSF*GKFRHH Trigger: GTGATGACGGAATTTCCCCAAGAAAGAAGTTCTATC...GACACAGTTTGAGAGGTGGCTTGTTGGGACAAGAGGCTTTAATTTATTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGGTACGATTGCAGGGGTaGATCCTTATTTTCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKVRLQG*ILIFFV Trigger: GACGAAGAAAATAAGGATCAACCCCTGCAATCGTAC...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGATCACTTCCCACTTATaGGTTTTGAGGTCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKITSHL*VLRSKA Trigger: AGCCTTTGACCTCAAAACCAATAAGTGGGAAGTGAT...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGTACCTTAAGAATACAAAGGGTTAGTAAACAGCTCCGATGTAGAAAGTACTTCCATATGTCATaGACTTCAGTGGGTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRCTLRIQRVSKQLRCRKYFHMS*TSVGAN Trigger: GTTTGCACCCACTGAAGTCAATGACATATGGAAGTA...CTTTCTACATCGGAGCTGTTTACTAACCCTTTGTATTCTTAAGGTACATCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS-3UTR CAA 90 bp | TGGGGAAAGGTTTCCGTTATTCAAACATTTCTTAAGAATGTAGACAGATGCATTTCCCACTTATTGGTTTaGAGGTCAAAGGCTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: WGKVSVIQTFLKNVDRCISHLLV*RSKAST Trigger: AGTTGAAGCCTTTGACCTCAAAACCAATAAGTGGGA...AATGCATCTGTCTACATTCTTAAGAAATGTTTGAATAACGGAAACCTTTCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS TCA 90 bp | TTCTGGACTTCTGGGTTGCTTTTAATTATGTCATCTTTCTCGACATaGTCTTTGAAATATTTCTCTGCCATAAGGCGAAAACGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: FWTSGLLLIMSSFST*SLKYFSAIRRKRIQ Trigger: CTGTATTCGTTTTCGCCTTATGGCAGAGAAATATTTCAAAGATCATGTCGAGAAAGATGACATAATTAAAAGCAACCCAGAAGTCCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 72 bp | AACATCGCCGTTCACCTCGCCCGCCCCTGCCTTCTCTaGATTTTTGCTGGGTTCCGGAAGTTTGCCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NIAVHLARPCLL*IFAGFRKFACK Trigger: TTTGCAGGCAAACTTCCGGAACCCAGCAAAAATGCAGAGAAGGCAGGGGCGGGCGAGGTGAACGGCGATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 72 bp | GCACAAAGCGATCAGACACAAACTCCCGGGCAGAAATaGCAAGTCTCGGGCAGTCGAGAAGCAGCCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: AQSDQTQTPGQK*QVSGSREAAPI Trigger: GATTGGGGCTGCTTCTCGACTGCCCGAGACTTGCCATTTCTGCCCGGGAGTTTGTGTCTGATCGCTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 72 bp | TTCATCACCAACATCGCCGTTCACCTCGCCCGCCCCTaGCTTCTCTGCATTTTTGCTGGGTTCCGGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FITNIAVHLARP*LLCIFAGFRKF Trigger: AAACTTCCGGAACCCAGCAAAAATGCAGAGAAGGCAGGGGCGGGCGAGGTGAACGGCGATGTTGGTGATGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 72 bp | GGAATCTGGAAGCGGCTGGACAGGGCGAAGATGTCTTaGACATTCCCATCATTGAGATCGATACTGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GIWKRLDRAKMS*TFPSLRSILAE Trigger: CTCTGCCAGTATCGATCTCAATGATGGGAATGTGCAAGACATCTTCGCCCTGTCCAGCCGCTTCCAGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 72 bp | CGGAATCTGGAAGCGGCTGGACAGGGCGAAGATGTCTaGCACATTCCCATCATTGAGATCGATACTGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNLEAAGQGEDV*HIPIIEIDTGR Trigger: TCTGCCAGTATCGATCTCAATGATGGGAATGTGCAAGACATCTTCGCCCTGTCCAGCCGCTTCCAGATTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 90 bp | TTCTTCGTCCACATACAGTCCCCCGACCACGTAGACCTGATTCTGTaGGGTAACAAGACTGGAATGGTTTCTGGGGATCTGCTCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FFVHIQSPDHVDLIL*GNKTGMVSGDLLCQ Trigger: CTGGCAGAGCAGATCCCCAGAAACCATTCCAGTCTTGTTACCCAACAGAATCAGGTCTACGTGGTCGGGGGACTGTATGTGGACGAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 90 bp | GAACACCGACGGAATCTGGAAGCGGCTGGACAGGGCGAAGATGTCTaGCACATTCCCATCATTGAGATCGATACTGGCAGAGTACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: EHRRNLEAAGQGEDV*HIPIIEIDTGRVQI Trigger: TATCTGTACTCTGCCAGTATCGATCTCAATGATGGGAATGTGCAAGACATCTTCGCCCTGTCCAGCCGCTTCCAGATTCCGTCGGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 72 bp | GGTAACAAGACTGGAATGGTTTCTGGGGATCTGCTCTaGCAGGGCAGTAAGGTAGCACTCATTTTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GNKTGMVSGDLL*QGSKVALIFHG Trigger: CCCATGGAAAATGAGTGCTACCTTACTGCCCTGGCAGAGCAGATCCCCAGAAACCATTCCAGTCTTGTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 72 bp | GACACCTCCTGCGATCACAATCTTGCCTTTATGGATTaGCACGCCAAACATGGAACGAGGGGTTTTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: DTSCDHNLAFMD*HAKHGTRGFHR Trigger: CCGATGAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 72 bp | CTTCCAGGAGATCTTTTAGACCATCCTGAAGAAGGGTaGATTGGTAAAGCCGGAGTTCCTCTGCAAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPGDLLDHPEEG*IGKAGVPLQAP Trigger: GGGAGCTTGCAGAGGAACTCCGGCTTTACCAATCCACCCTTCTTCAGGATGGTCTAAAAGATCTCCTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 72 bp | TTGACTTCAGTGGGTGCAAACTCTTTAGATTCCAGCTaGATCATCGCAAAGCCACCGATGGCGTACAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTSVGANSLDSS*IIAKPPMAYRA Trigger: AGCCCTGTACGCCATCGGTGGCTTTGCGATGATCCAGCTGGAATCTAAAGAGTTTGCACCCACTGAAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 72 bp | CACATACAGTCCCCCGACCACGTAGACCTGATTCTGTaGGGTAACAAGACTGGAATGGTTTCTGGGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: HIQSPDHVDLIL*GNKTGMVSGDL Trigger: CAGATCCCCAGAAACCATTCCAGTCTTGTTACCCAACAGAATCAGGTCTACGTGGTCGGGGGACTGTATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 72 bp | TCAGTGACACCTCCTGCGATCACAATCTTGCCTTTATaGATTGCCACGCCAAACATGGAACGAGGGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVTPPAITILPL*IATPNMERGVF Trigger: GAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 72 bp | CCCGCCAGGCTCACCAGGCTGATAGAACTTCTTTCTTaGGGAAATTCCGTCATCACTTCCCACTTATTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PARLTRLIELLS*GNSVITSHLLV Trigger: AACCAATAAGTGGGAAGTGATGACGGAATTTCCCCAAGAAAGAAGTTCTATCAGCCTGGTGAGCCTGGCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 72 bp | TCCCGCCAGGCTCACCAGGCTGATAGAACTTCTTTCTaGGGGAAATTCCGTCATCACTTCCCACTTATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRQAHQADRTSF*GKFRHHFPLIG Trigger: ACCAATAAGTGGGAAGTGATGACGGAATTTCCCCAAGAAAGAAGTTCTATCAGCCTGGTGAGCCTGGCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 90 bp | GAAGCTGAAAGACCATCTTCAGTGACACCTCCTGCGATCACAATCTaGCCTTTATGGATTGCCACGCCAAACATGGAACGAGGGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EAERPSSVTPPAITI*PLWIATPNMERGVF Trigger: GAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGAAGATGGTCTTTCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CCA 72 bp | TCACAATCTTGCCTTTATGGATTGCCACGCCAAACATaGAACGAGGGGTTTTCATCGGAGCCAGATCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SQSCLYGLPRQT*NEGFSSEPDLS Trigger: GGAAAGATCTGGCTCCGATGAAAACCCCTCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 72 bp | AGACCATCTTCAGTGACACCTCCTGCGATCACAATCTaGCCTTTATGGATTGCCACGCCAAACATGGAACGA | + |
|
Preference number: 6 (lower is better) Translates to: RPSSVTPPAITI*PLWIATPNMER Trigger: TCGTTCCATGTTTGGCGTGGCAATCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGAAGATGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS CAA 90 bp | ACCCATTTCATCACGGCCTCAAATACTACTTCCTCCTTTTCTACGTaGAGGCTGTCGTTTGAAATGACGGAGATCAGTTCTTGTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: THFITASNTTSSFST*RLSFEMTEISSCGD Trigger: GTCCCCACAAGAACTGATCTCCGTCATTTCAAACGACAGCCTCAACGTAGAAAAGGAGGAAGTAGTATTTGAGGCCGTGATGAAATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS GCA 72 bp | AAGGTAGCACTCATTTTCCATGGGGTCATACGCTACTaGAGCCGTGTCATTGACCAAGAGGATGAGATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KVALIFHGVIRY*SRVIDQEDEIF Trigger: AAAGATCTCATCCTCTTGGTCAATGACACGGCTGCAGTAGCGTATGACCCCATGGAAAATGAGTGCTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
||
| CDS TCA 72 bp | TACTACTTCCTCCTTTTCTACGTTGAGGCTGTCGTTTaGAATGACGGAGATCAGTTCTTGTGGGGACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: YYFLLFYVEAVV*NDGDQFLWGQL Trigger: CAACTGTCCCCACAAGAACTGATCTCCGTCATTTCAAACGACAGCCTCAACGTAGAAAAGGAGGAAGTAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS TCA 72 bp | CAAAGGCTTCAACTGAAGCTGAAAGACCATCTTCAGTaGCACCTCCTGCGATCACAATCTTGCCTTTATGGA | + |
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Preference number: 6 (lower is better) Translates to: QRLQLKLKDHLQ*HLLRSQSCLYG Trigger: TCCATAAAGGCAAGATTGTGATCGCAGGAGGTGTCACTGAAGATGGTCTTTCAGCTTCAGTTGAAGCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS CAA 90 bp | TGGAAGCGGCTGGACAGGGCGAAGATGTCTTGCACATTCCCATCATaGAGATCGATACTGGCAGAGTACAGATATTTGATGATTAAATCA | + |
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Preference number: 6 (lower is better) Translates to: WKRLDRAKMSCTFPS*RSILAEYRYLMIKS Trigger: TGATTTAATCATCAAATATCTGTACTCTGCCAGTATCGATCTCAATGATGGGAATGTGCAAGACATCTTCGCCCTGTCCAGCCGCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS TCA 72 bp | GGGGAAATTCCGTCATCACTTCCCACTTATTGGTTTTaGGGTCAAAGGCTTCAACTGAAGCTGAAAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: GEIPSSLPTYWF*GQRLQLKLKDH Trigger: ATGGTCTTTCAGCTTCAGTTGAAGCCTTTGACCTCAAAACCAATAAGTGGGAAGTGATGACGGAATTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS CAA 72 bp | ATCACGGCCTCAAATACTACTTCCTCCTTTTCTACGTaGAGGCTGTCGTTTGAAATGACGGAGATCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ITASNTTSSFST*RLSFEMTEISS Trigger: AGAACTGATCTCCGTCATTTCAAACGACAGCCTCAACGTAGAAAAGGAGGAAGTAGTATTTGAGGCCGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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| CDS TCA 72 bp | TCTGGGTTGCTTTTAATTATGTCATCTTTCTCGACATaGTCTTTGAAATATTTCTCTGCCATAAGGCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SGLLLIMSSFST*SLKYFSAIRRK Trigger: TTTTCGCCTTATGGCAGAGAAATATTTCAAAGATCATGTCGAGAAAGATGACATAATTAAAAGCAACCCAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100050.4 |
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