Pregenerated sensors for KLHL40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074001Ensembl transcript IDs: ENSMUST00000098272.4
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCACACACAGCCAGCCAGGGTAGGGCCAGGACACAACCTGGGATaGCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: WHTQPARVGPGHNLG*RPIALQSLGRHGVP Trigger: GGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGGCATCCCAGGTTGTGTCCTGGCCCTACCCTGGCTGGCTGTGTGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR TCA 90 bp | CCCAGAGGGACATTGAGAAGCAGGCAGCAATGTCCCTTCCCTGACTaGAGTACCCTTTCTGACTCATCCTGGGAACCCAAAGGGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: PRGTLRSRQQCPFPD*STLSDSSWEPKGLW Trigger: CCAGAGCCCTTTGGGTTCCCAGGATGAGTCAGAAAGGGTACTTCAGTCAGGGAAGGGACATTGCTGCCTGCTTCTCAATGTCCCTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR CCA 90 bp | CAACCTGGGATGCCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATaGTGTCCCCAGAGGGACATTGAGAAGCAGGCAGCAATGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: QPGMPAYSFAVLGKT*CPQRDIEKQAAMSL Trigger: AAGGGACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGGCATCCCAGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR GCA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTaGCATCGACGGAGACACTCCCATCTGATCAGCACGGGTACTGAG | + |
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Preference number: 1 (lower is better) Translates to: LFLRFLREIWVSTRR*HRRRHSHLISTGTE Trigger: CTCAGTACCCGTGCTGATCAGATGGGAGTGTCTCCGTCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR-3UTR TCA 90 bp | AGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTCCCCAGAGGGACATTaGGAAGCAGGCAGCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: STGTESLGRPYGTHSQPGSPEGH*EAGSNV Trigger: GACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGA...CCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR-3UTR TCA 90 bp | CATCTGATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCAGGAAGGAGGCTCAGTaGGGGTCCTGCACCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: HLISTGTESLGRPYGTHSRKEAQ*GSCTSH Trigger: GTGACTGGTGCAGGACCCTCACTGAGCCTCCTTCCT...GCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGATCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATGAACCCAAAGGGCTCTaGCCTCTCCCAGCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLFLRFLREIWVSTRRCHEPKGL*PLPAPP Trigger: GGGAGGAGCTGGGAGAGGCCAGAGCCCTTTGGGTTC...ATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR-3UTR CAA 90 bp | AGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGGTCCCCAGAGGGACATaGAGAAGCAGGCAGCAATGT | + |
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Preference number: 3 (lower is better) Translates to: STGTESLGRPYGTHSQPGVPRGT*RSRQQC Trigger: ACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGAC...CCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR GCA 72 bp | CAGCCAGCCAGGGTAGGGCCAGGACACAACCTGGGATaGCGGCCTATAGCTTTGCAGTCCTTGGGAAGACAT | + |
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Preference number: 3 (lower is better) Translates to: QPARVGPGHNLG*RPIALQSLGRH Trigger: ATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGGCATCCCAGGTTGTGTCCTGGCCCTACCCTGGCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR CCA 72 bp | AGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTaGGTTAGCACAAGAAGGTGCCATCGACGGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: STLLFLRFLREI*VSTRRCHRRRH Trigger: GTGTCTCCGTCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCGCACTCGTTGGCGGCTaGGTCGTAAGCCACGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VLSPLGDPMAHTASQGRAALVGG*VVSHGA Trigger: GGCGCCGTGGCTTACGACCCAGCCGCCAACGAGTGC...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCCCTCAGCATCTCCGCTaGTGGCCCAGCGCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLGDPMAHTASQGRAPQHLR*WPSASQ Trigger: CTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAGG...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | CTGATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCACGTAGATGGCGTTaGGAGCCTCCCCCAGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LISTGTESLGRPYGTHSQPRRWR*EPPPGR Trigger: TCGGCCTGGGGGAGGCTCTCAACGCCATCTACGTGG...CTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | CGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGCGCTGGCGCTCCGCCTaGGCCTCAGCATCTCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: RPIALQSLGRHGVPRGTLRWRSA*ASASPL Trigger: CAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCG...CAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | AGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGAGCGCAGAGTGTCATTaGGGATCCCGGGCAGTACTC | + |
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Preference number: 4 (lower is better) Translates to: STGTESLGRPYGTHSQPGSAECH*GSRAVL Trigger: GAGTACTGCCCGGGATCCTCAATGACACTCTGCGCT...CCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCTGCAGGAGCGTCTGCTaGTACAGACGCTGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLSPLGDPMAHTASQGRACRSVC*YRRCSS Trigger: GGAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCA...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | GCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTCACAGTAGCACTCGTTaGCGGCTGGGTCGTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ARVLSPLGDPMAHTASQGHSSTR*RLGRKP Trigger: TGGCTTACGACCCAGCCGCCAACGAGTGCTACTGTG...ACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR CAA 72 bp | GGGCCAGGACACAACCTGGGATGCCGGCCTATAGCTTaGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGHNLGCRPIA*QSLGRHGVPRG Trigger: CCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGGCATCCCAGGTTGTGTCCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | CGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGGCTAGCACCAGGCGGTaGCACGGGAACTCGCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RPIALQSLGRHGVPRGTLASTRR*HGNSRS Trigger: TGAGCGCGAGTTCCCGTGCCACCGCCTGGTGCTAGC...CAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCAGACAGCCAGGCAATTaGCCAAGCACAGGCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VLSPLGDPMAHTASQGRARQPGN*PSTGAS Trigger: AGAAGCGCCTGTGCTTGGCCAATTGCCTGGCTGTCT...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | GCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTTGGTTCTTGGGGATCTaGGTGGACAGGGATGCACAG | + |
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Preference number: 4 (lower is better) Translates to: ARVLSPLGDPMAHTASQGWFLGI*VDRDAQ Trigger: CTGTGCATCCCTGTCCACCCAGATCCCCAAGAACCA...ACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | CGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGGGTCCAGCATGTCCTTaGGGCCGTCTTGCAGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: RPIALQSLGRHGVPRGTLGPACP*GRLAGA Trigger: CGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACC...CAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCATCCAGCGCGATCTCTaGTGTGTACAGGTAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLGDPMAHTASQGRAIQRDL*CVQVVQ Trigger: CTGCACTACCTGTACACATCAGAGATCGCGCTGGAT...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | TTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGAAGCAGGCAGCAATGTCCCGGCCGTCGCTGGAGATaGTGGCGATCAGCTCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGRHGVPRGTLRSRQQCPGRRWR*WRSARQ Trigger: CTGACGAGCTGATCGCCATCATCTCCAGCGACGGCC...GGGACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | CATGGTGTCCCCAGAGGGACATTGAGAAGCAGGCAGCAATGTCCCTTCCCTGACTCAGGCGAAGCACATTaGGGCGCACAGGGAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HGVPRGTLRSRQQCPFPDSGEAH*GAQGGR Trigger: CCTTCCTCCCTGTGCGCCTCAATGTGCTTCGCCTGA...GTCAGGGAAGGGACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGACACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | ATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCACAGGTCTTGCACGCTTaGCTCATCCAGCGCGATCTC | + |
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Preference number: 4 (lower is better) Translates to: ISTGTESLGRPYGTHSQPQVLHA*LIQRDL Trigger: GAGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTG...TGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCAAGCACAGGCGCTTCTaGAGAAACGACACGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VLSPLGDPMAHTASQGRAKHRRF*RNDTQM Trigger: CATCTGCGTGTCGTTTCTGCAGAAGCGCCTGTGCTT...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCGACGCTCTCGAAGACCGTaGGCAGCGCGCGCTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LFLRFLREIWVSTRRCHRRSRRP*AARAGA Trigger: AGCGCCAGCGCGCGCTGCCCACGGTCTTCGAGAGCG...TCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | GCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGGGCCGTCATGGACCGTaGCCCCAAAGAGCGATCGGG | + |
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Preference number: 4 (lower is better) Translates to: AYSFAVLGKTWCPQRDIEGRHGP*PQRAIG Trigger: CCCGATCGCTCTTTGGGGCCACGGTCCATGACGGCC...CTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | CATGGTGTCCCCAGAGGGACATTGAGAAGCAGGCAGCAATGTCCCTTCCCTGACAAGATGCGGCCGTCATaGACCGTGGCCCCAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HGVPRGTLRSRQQCPFPDKMRPS*TVAPKS Trigger: GCTCTTTGGGGCCACGGTCCATGACGGCCGCATCTT...GTCAGGGAAGGGACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGACACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR TCA 90 bp | ATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAACGACACGCAGATGGTaGAGATGGACGGGATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ISTGTESLGRPYGTHSQPTTRRW*RWTGSG Trigger: TCCAGATCCCGTCCATCTTCACCATCTGCGTGTCGT...TGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | ATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCATCTTGCAGGAGCGTCTaGTGGTACAGACGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ISTGTESLGRPYGTHSQPSCRSV*WYRRCS Trigger: GGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGA...TGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | ATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCACATCGTCCTCAGCCTTaGTGTCTTCTGTGCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ISTGTESLGRPYGTHSQPHRPQP*CLLCPG Trigger: ACCAGGGCACAGAAGACACCAAGGCTGAGGACGATG...TGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | CCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTCCTTGGTGTCTTCTGTaGCCTGGTTGGCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PAYSFAVLGKTWCPQRDIPWCLL*PGWPPW Trigger: CCAAGGAGGCCAACCAGGGCACAGAAGACACCAAGG...AATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | GGAAGACATGGTGTCCCCAGAGGGACATTGAGAAGCAGGCAGCAATGTCCCTTCCTGGGTGGACAGGGATaGACAGTAGCACTCGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRHGVPRGTLRSRQQCPFLGGQG*TVALVG Trigger: GCCAACGAGTGCTACTGTGCATCCCTGTCCACCCAG...GAAGGGACATTGCTGCCTGCTTCTCAATGTCCCTCTGGGGACACCATGTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | GCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGTGTGTCTGTCACCCCTaGGGCCACAAAGATGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: AYSFAVLGKTWCPQRDIECVCHP*GHKDAA Trigger: GGCCGCATCTTTGTGGCCGCAGGGGTGACAGACACA...CTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | ATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCATCTAGGAACTTGCCGTaGTCCAGCATGTCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ISTGTESLGRPYGTHSQPSRNLP*SSMSLR Trigger: CCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGA...TGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | CCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGATCACCATCTGCACCTTaGGCAACAGCTCGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PIALQSLGRHGVPRGTLRSPSAP*ATARAG Trigger: CCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGA...TCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | TGCTCGGAAAGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCCTGGGAGCGCACAAGTaGGTGGCGCTCCACGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: CSESTLLFLRFLREIWVSLGAHK*VALHAS Trigger: ACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAG...GCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCTTTCCGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | CGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGATCGGGCTGTCTGCATaGGTGCTAGCTCCTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: RPIALQSLGRHGVPRGTLIGLSA*VLAPST Trigger: AGTGGAAGGAGCTAGCACCCATGCAGACAGCCCGAT...CAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| 3UTR CAA 72 bp | CACAACCTGGGATGCCGGCCTATAGCTTTGCAGTCCTaGGGAAGACATGGTGTCCCCAGAGGGACATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: HNLGCRPIALQS*GRHGVPRGTLR Trigger: TCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGGCATCCCAGGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | CCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGATCCTTGAGGCCGTCTTaGAGGAGCGTCTGCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: PIALQSLGRHGVPRGTLRSLRPS*RSVCWY Trigger: GTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGA...TCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | TTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCTCTCCCGCGCTATCTaGCTCAGCCAGGAAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLFLRFLREIWVSTRRCHLSRAI*LSQEAR Trigger: GCGCGCTTCCTGGCTGAGCCAGATAGCGCGGGAGAG...ATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | TGCTCGGAAAGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCCTGGGACACTACGTCTaGCGACACCTCCTCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: CSESTLLFLRFLREIWVSLGHYV*RHLLQA Trigger: CGCCTGGAGGAGGTGTCGCCAGACGTAGTGTCCCAG...GCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCTTTCCGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | GCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGCACAGTCTAGGAACTTaGCGTGGTCCAGCATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AYSFAVLGKTWCPQRDIEHSLGT*RGPACP Trigger: AGGACATGCTGGACCACGGCAAGTTCCTAGACTGTG...CTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR GCA 90 bp | CCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGAGCATCCTTCACCATCTaGACCTTGCGCAACAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PIALQSLGRHGVPRGTLRASFTI*TLRNSS Trigger: CGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGC...TCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CCA 90 bp | TGCTCGGAAAGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCGTGTCTTCTGTGCCCTaGTTGGCCTCCTTGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSESTLLFLRFLREIWVSVSSVP*LASLAR Trigger: TCGGGCCAAGGAGGCCAACCAGGGCACAGAAGACAC...GCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCTTTCCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CCA 90 bp | CCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGAACTCCGTCTCCAGAGTaGCAAAGCCACCCAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PIALQSLGRHGVPRGTLRTPSPE*QSHPRH Trigger: ATGCCTTGGGTGGCTTTGCCACTCTGGAGACGGAGT...TCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR TCA 90 bp | GCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGATGAAGATGAGATCCTaGAGGAACATGCCGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AYSFAVLGKTWCPQRDIEMKMRS*RNMPKR Trigger: GCGCTTCGGCATGTTCCTTCAGGATCTCATCTTCAT...CTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCGGAAAGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCGAGGCGGCCCTCATGTaGATCCTTCACCATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSESTLLFLRFLREIWVSEAALM*ILHHLH Trigger: GTGCAGATGGTGAAGGATGCACATGAGGGCCGCCTC...GCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCTTTCCGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CCA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCGACCGGCCACGAAGACTTaGTTCTCCTTGGTCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLRFLREIWVSTRRCHRPATKT*FSLVTR Trigger: TCTGGTGACCAAGGAGAACCAAGTCTTCGTGGCCGG...TCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCGGAAAGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCATCTCCAGATGTCATTaGGCTCCGTGGGGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESTLLFLRFLREIWVSISRCH*APWGPA Trigger: AGCTGGTCCCCACGGAGCTCAATGACATCTGGAGAT...GCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCTTTCCGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCGGAAAGCACTTTATTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCCCTTGGTCACCAGACTaGCATGGTTCTTGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESTLLFLRFLREIWVSPWSPD*HGSWGS Trigger: AGATCCCCAAGAACCATGTCAGTCTGGTGACCAAGG...GCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAATAAAGTGCTTTCCGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR TCA 90 bp | CCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGAGAAATGCTGTACACCTCTaGAGAGCTGGTAAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PIALQSLGRHGVPRGTLRNAVHL*RAGKSC Trigger: ACAGGACTTACCAGCTCTTCAGAGGTGTACAGCATT...TCTCAATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CCA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCGATCCACTCAAACTTCTTaGGGTCGTAGACACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLRFLREIWVSTRRCHRSTQTS*GRRHTS Trigger: AGATGTGTGTCTACGACCCCAAGAAGTTTGAGTGGA...TCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | AGCAGGCGGCAGCGAACGCTCTCGAAGACCGTGGGCAGCGCGCGCTaGCGCTCCGCCTGCGCCTCAGCATCTCCGCTGCTGGCCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRQRTLSKTVGSAR*RSACASASPLLAQR Trigger: GCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCACGGTCTTCGAGAGCGTTCGCTGCCGCCTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | GGAAAGCACGAGGCAGCAGGCGGCAGCGAACGCTCTCGAAGACCGTaGGCAGCGCGCGCTGGCGCTCCGCCTGCGCCTCAGCATCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GKHEAAGGSERSRRP*AARAGAPPAPQHLR Trigger: GCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCACGGTCTTCGAGAGCGTTCGCTGCCGCCTGCTGCCTCGTGCTTTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | CGAACGCTCTCGAAGACCGTGGGCAGCGCGCGCTGGCGCTCCGCCTaGGCCTCAGCATCTCCGCTGCTGGCCCAGCGCATCACAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTLSKTVGSARWRSA*ASASPLLAQRITAS Trigger: TGAGGCTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCACGGTCTTCGAGAGCGTTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | TGGGCAGCGCGCGCTGGCGCTCCGCCTGCGCCTCAGCATCTCCGCTaGTGGCCCAGCGCATCACAGCCTCAAACACTGCCTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WAARAGAPPAPQHLR*WPSASQPQTLPPPS Trigger: AGAAGGAGGAGGCAGTGTTTGAGGCTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | TACGTCTGGCGACACCTCCTCCAGGCGTACCTCTCCCGCGCTATCTaGCTCAGCCAGGAAGCGCGCGCGGAAGTAGGGGCTACAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YVWRHLLQAYLSRAI*LSQEARAEVGATGG Trigger: GCCGCCTGTAGCCCCTACTTCCGCGCGCGCTTCCTGGCTGAGCCAGATAGCGCGGGAGAGGTACGCCTGGAGGAGGTGTCGCCAGACGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | GCAGCGCGCGCTGGCGCTCCGCCTGCGCCTCAGCATCTCCGCTGCTaGCCCAGCGCATCACAGCCTCAAACACTGCCTCCTCCTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AARAGAPPAPQHLRC*PSASQPQTLPPPSL Trigger: TAGAGAAGGAGGAGGCAGTGTTTGAGGCTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | ATCTGCACCTTGCGCAACAGCTCGGGCTGGGAGCGCACAAGTGGGTaGCGCTCCACGCGAGTCTCCAGGAAAGCACGAGGCAGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ICTLRNSSGWERTSG*RSTRVSRKARGSRR Trigger: CCGCCTGCTGCCTCGTGCTTTCCTGGAGACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | CACCATCTGCACCTTGCGCAACAGCTCGGGCTGGGAGCGCACAAGTaGGTGGCGCTCCACGCGAGTCTCCAGGAAAGCACGAGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHLHLAQQLGLGAHK*VALHASLQESTRQQ Trigger: CTGCTGCCTCGTGCTTTCCTGGAGACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | TTGCCGTGGTCCAGCATGTCCTTGAGGCCGTCTTGCAGGAGCGTCTaGTGGTACAGACGCTGTTCCTCCGCCTGCTCCAAGCCCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPWSSMSLRPSCRSV*WYRRCSSACSKPSV Trigger: GACGCTGGGCTTGGAGCAGGCGGAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | TGTCTGTCACCCCTGCGGCCACAAAGATGCGGCCGTCATGGACCGTaGCCCCAAAGAGCGATCGGGCTGTCTGCATGGGTGCTAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSPLRPQRCGRHGP*PQRAIGLSAWVLAP Trigger: AGGAGCTAGCACCCATGCAGACAGCCCGATCGCTCTTTGGGGCCACGGTCCATGACGGCCGCATCTTTGTGGCCGCAGGGGTGACAGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | AGTCCTGTGTCTGTCACCCCTGCGGCCACAAAGATGCGGCCGTCATaGACCGTGGCCCCAAAGAGCGATCGGGCTGTCTGCATGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVSVTPAATKMRPS*TVAPKSDRAVCMGA Trigger: AGCACCCATGCAGACAGCCCGATCGCTCTTTGGGGCCACGGTCCATGACGGCCGCATCTTTGTGGCCGCAGGGGTGACAGACACAGGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | TTGCGCAGTGTAGTGAGGCGGCCCTCATGTGCATCCTTCACCATCTaGACCTTGCGCAACAGCTCGGGCTGGGAGCGCACAAGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSVVRRPSCASFTI*TLRNSSGWERTSGW Trigger: CCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCCTCACTACACTGCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | GGTCACCAGACTGACATGGTTCTTGGGGATCTGGGTGGACAGGGATaGACAGTAGCACTCGTTGGCGGCTGGGTCGTAAGCCACGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHQTDMVLGDLGGQG*TVALVGGWVVSHGA Trigger: GGCGCCGTGGCTTACGACCCAGCCGCCAACGAGTGCTACTGTGCATCCCTGTCCACCCAGATCCCCAAGAACCATGTCAGTCTGGTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | GTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGCCAGGGTAGGGCCCGCGGCAAACAGGTCTaGCACGCTTGCCTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSPLGDPMAHTASQGRARGKQV*HACLIQ Trigger: CTGGATGAGGCAAGCGTGCAAGACCTGTTTGCCGCG...GGCCCTACCCTGGCTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | CAGTCTAGGAACTTGCCGTGGTCCAGCATGTCCTTGAGGCCGTCTTaGAGGAGCGTCTGCTGGTACAGACGCTGTTCCTCCGCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSRNLPWSSMSLRPS*RSVCWYRRCSSACS Trigger: GGAGCAGGCGGAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 90 bp | CTCAGCATCTCCGCTGCTGGCCCAGCGCATCACAGCCTCAAACACTaGCTCCTCCTTCTCTACGTTGAGGCCGTCGCTGGAGATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSISAAGPAHHSLKH*LLLLYVEAVAGDDG Trigger: GCCATCATCTCCAGCGACGGCCTCAACGTAGAGAAGGAGGAGGCAGTGTTTGAGGCTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | AACTCGCGCTCACCCACGCGCACTACACAGTCTAGGAACTTGCCGTaGTCCAGCATGTCCTTGAGGCCGTCTTGCAGGAGCGTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSRSPTRTTQSRNLP*SSMSLRPSCRSVCW Trigger: CCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTGTAGTGCGCGTGGGTGAGCGCGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | TCATGTGCATCCTTCACCATCTGCACCTTGCGCAACAGCTCGGGCTaGGAGCGCACAAGTGGGTGGCGCTCCACGCGAGTCTCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCASFTICTLRNSSG*ERTSGWRSTRVSRK Trigger: TTTCCTGGAGACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | GGGGATCTGGGTGGACAGGGATGCACAGTAGCACTCGTTGGCGGCTaGGTCGTAAGCCACGGCGCCTTCCTCGCTGATCATGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDLGGQGCTVALVGG*VVSHGAFLADHEDE Trigger: CTCATCTTCATGATCAGCGAGGAAGGCGCCGTGGCTTACGACCCAGCCGCCAACGAGTGCTACTGTGCATCCCTGTCCACCCAGATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CAA 90 bp | CTGATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGTCTTCTGTGCCCTGGTaGGCCTCCTTGGCCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LISTGTESLGRPYGTHSQSSVPW*ASLARA Trigger: AGCTCGGGCCAAGGAGGCCAACCAGGGCACAGAAGA...CTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | CGGGCAGTACTCGTTCCTCATCGTCCTCAGCCTTGGTGTCTTCTGTaGCCTGGTTGGCCTCCTTGGCCCGAGCTGTCTGCTCACCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAVLVPHRPQPWCLL*PGWPPWPELSAHPF Trigger: AAAAGGGTGAGCAGACAGCTCGGGCCAAGGAGGCCAACCAGGGCACAGAAGACACCAAGGCTGAGGACGATGAGGAACGAGTACTGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS TCA 90 bp | CGCGCACTACACAGTCTAGGAACTTGCCGTGGTCCAGCATGTCCTTaGGGCCGTCTTGCAGGAGCGTCTGCTGGTACAGACGCTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RALHSLGTCRGPACP*GRLAGASAGTDAVP Trigger: AGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTGTAGTGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS TCA 90 bp | CGCGGCAAACAGGTCTTGCACGCTTGCCTCATCCAGCGCGATCTCTaGTGTGTACAGGTAGTGCAGCACCTGGGACACTACGTCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RGKQVLHACLIQRDL*CVQVVQHLGHYVWR Trigger: TCGCCAGACGTAGTGTCCCAGGTGCTGCACTACCTGTACACATCAGAGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTGTTTGCCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | AGAAACGACACGCAGATGGTGAAGATGGACGGGATCTGGAATCGATaGGCCGCGGCAAACAGGTCTTGCACGCTTGCCTCATCCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RNDTQMVKMDGIWNR*AAANRSCTLASSSA Trigger: CGCGCTGGATGAGGCAAGCGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCCAGATCCCGTCCATCTTCACCATCTGCGTGTCGTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CTGATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGTCCTCCTTCTCTACGTaGAGGCCGTCGCTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LISTGTESLGRPYGTHSQSSFST*RPSLEM Trigger: CATCTCCAGCGACGGCCTCAACGTAGAGAAGGAGGA...CTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS TCA 90 bp | AGAGGCCACCGGCCACGAAGACTTGGTTCTCCTTGGTCACCAGACTaGCATGGTTCTTGGGGATCTGGGTGGACAGGGATGCACAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGHRPRRLGSPWSPD*HGSWGSGWTGMHSS Trigger: GCTACTGTGCATCCCTGTCCACCCAGATCCCCAAGAACCATGTCAGTCTGGTGACCAAGGAGAACCAAGTCTTCGTGGCCGGTGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | CCGAGGCGGAAGACAGCCAGGCAATTGGCCAAGCACAGGCGCTTCTaGAGAAACGACACGCAGATGGTGAAGATGGACGGGATCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRKTARQLAKHRRF*RNDTQMVKMDGIWN Trigger: ATTCCAGATCCCGTCCATCTTCACCATCTGCGTGTCGTTTCTGCAGAAGCGCCTGTGCTTGGCCAATTGCCTGGCTGTCTTCCGCCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | TTGGTGTCTTCTGTGCCCTGGTTGGCCTCCTTGGCCCGAGCTGTCTaGTCACCCTTTTCCTTCTTCTTCTTGCGCAGTGTAGTGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSSVPWLASLARAV*SPFSFFFLRSVVRR Trigger: CCGCCTCACTACACTGCGCAAGAAGAAGAAGGAAAAGGGTGAGCAGACAGCTCGGGCCAAGGAGGCCAACCAGGGCACAGAAGACACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 90 bp | CGCTTCTGCAGAAACGACACGCAGATGGTGAAGATGGACGGGATCTaGAATCGATGCGCCGCGGCAAACAGGTCTTGCACGCTTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RFCRNDTQMVKMDGI*NRCAAANRSCTLAS Trigger: TGAGGCAAGCGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCCAGATCCCGTCCATCTTCACCATCTGCGTGTCGTTTCTGCAGAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCGAAGTCCCAGGAAGTCGTaGTCCCGCGCCACCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLRFLREIWVSTRRCHRSPRKS*SRATSG Trigger: CCCGCTGGTGGCGCGGGACAACGACTTCCTGGGACT...TCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTTTCACCATCTGCACCTaGCGCAACAGCTCGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAYSFAVLGKTWCPQRDIFTICT*RNSSGW Trigger: CCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAA...AATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CATCTGATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCTCATCGTCCTCAGCCTaGGTGTCTTCTGTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLISTGTESLGRPYGTHSSSSSA*VSSVPW Trigger: CCAGGGCACAGAAGACACCAAGGCTGAGGACGATGA...GCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGATCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CTGATCAGCACGGGTACTGAGTCCCTTGGGAGACCCTATGGCACACACAGCCAGAGACTGACATGGTTCTaGGGGATCTGGGTGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LISTGTESLGRPYGTHSQRLTWF*GIWVDR Trigger: CCTGTCCACCCAGATCCCCAAGAACCATGTCAGTCT...CTGGCTGTGTGTGCCATAGGGTCTCCCAAGGGACTCAGTACCCGTGCTGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTGTCAGGCGAAGCACATaGAGGCGCACAGGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAYSFAVLGKTWCPQRDIVRRST*RRTGRK Trigger: CTTCCTCCCTGTGCGCCTCAATGTGCTTCGCCTGAC...AATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS GCA 90 bp | CTTTTCCTTCTTCTTCTTGCGCAGTGTAGTGAGGCGGCCCTCATGTaGATCCTTCACCATCTGCACCTTGCGCAACAGCTCGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLLLAQCSEAALM*ILHHLHLAQQLGLG Trigger: TCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCCTCACTACACTGCGCAAGAAGAAGAAGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTACAGGTCTTGCACGCTaGCCTCATCCAGCGCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PAYSFAVLGKTWCPQRDITGLAR*PHPARS Trigger: AGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTGT...AATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS-3UTR CAA 90 bp | CCGGCCTATAGCTTTGCAGTCCTTGGGAAGACATGGTGTCCCCAGAGGGACATTTATCTCCAGATGTCATaGAGCTCCGTGGGGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAYSFAVLGKTWCPQRDIYLQMS*SSVGTS Trigger: GCTGGTCCCCACGGAGCTCAATGACATCTGGAGATA...AATGTCCCTCTGGGGACACCATGTCTTCCCAAGGACTGCAAAGCTATAGGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 90 bp | GGCCTCAAAGGAGGTCCACTTGTTGTCTGCAATGCTGTACACCTCTaGAGAGCTGGTAAGTCCTGTGTCTGTCACCCCTGCGGCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLKGGPLVVCNAVHL*RAGKSCVCHPCGHK Trigger: TTTGTGGCCGCAGGGGTGACAGACACAGGACTTACCAGCTCTTCAGAGGTGTACAGCATTGCAGACAACAAGTGGACCTCCTTTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCGAGTCCTTGAGGCCGTCTaGCAGGAGCGTCTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLRFLREIWVSTRRCHRVLEAV*QERLLV Trigger: TACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGAC...TCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 90 bp | ATCGGGCTGTCTGCATGGGTGCTAGCTCCTTCCACTCAAACTTCTTaGGGTCGTAGACACACATCTTGTTCAGACATTTCCTGTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IGLSAWVLAPSTQTS*GRRHTSCSDISCLC Trigger: GCAAAGACAGGAAATGTCTGAACAAGATGTGTGTCTACGACCCCAAGAAGTTTGAGTGGAAGGAGCTAGCACCCATGCAGACAGCCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTGAGATTCCTACGGGAGATCTGGGTTAGCACAAGAAGGTGCCATCGAAAGACTTGGTTCTCCTaGGTCACCAGACTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLRFLREIWVSTRRCHRKTWFS*VTRLTW Trigger: CCATGTCAGTCTGGTGACCAAGGAGAACCAAGTCTT...TCGATGGCACCTTCTTGTGCTAACCCAGATCTCCCGTAGGAATCTCAGGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | GAGGCAGCAGGCGGCAGCGAACGCTCTCGAAGACCGTaGGCAGCGCGCGCTGGCGCTCCGCCTGCGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAAGGSERSRRP*AARAGAPPAPQ Trigger: CTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCACGGTCTTCGAGAGCGTTCGCTGCCGCCTGCTGCCTC 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | TCGAAGACCGTGGGCAGCGCGCGCTGGCGCTCCGCCTaGGCCTCAGCATCTCCGCTGCTGGCCCAGCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SKTVGSARWRSA*ASASPLLAQRI Trigger: GATGCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCACGGTCTTCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | CAGCGAACGCTCTCGAAGACCGTGGGCAGCGCGCGCTaGCGCTCCGCCTGCGCCTCAGCATCTCCGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QRTLSKTVGSAR*RSACASASPLL Trigger: CAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCGCGCTGCCCACGGTCTTCGAGAGCGTTCGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | CGCGCTGGCGCTCCGCCTGCGCCTCAGCATCTCCGCTaGTGGCCCAGCGCATCACAGCCTCAAACACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGAPPAPQHLR*WPSASQPQTLP Trigger: AGGCAGTGTTTGAGGCTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | CGACACCTCCTCCAGGCGTACCTCTCCCGCGCTATCTaGCTCAGCCAGGAAGCGCGCGCGGAAGTAGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RHLLQAYLSRAI*LSQEARAEVGA Trigger: AGCCCCTACTTCCGCGCGCGCTTCCTGGCTGAGCCAGATAGCGCGGGAGAGGTACGCCTGGAGGAGGTGTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | GCTGGCGCTCCGCCTGCGCCTCAGCATCTCCGCTGCTaGCCCAGCGCATCACAGCCTCAAACACTGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGAPPAPQHLRC*PSASQPQTLPP Trigger: AGGAGGCAGTGTTTGAGGCTGTGATGCGCTGGGCCAGCAGCGGAGATGCTGAGGCGCAGGCGGAGCGCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | TTGCGCAACAGCTCGGGCTGGGAGCGCACAAGTGGGTaGCGCTCCACGCGAGTCTCCAGGAAAGCACGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRNSSGWERTSG*RSTRVSRKARG Trigger: GCCTCGTGCTTTCCTGGAGACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | CACCTTGCGCAACAGCTCGGGCTGGGAGCGCACAAGTaGGTGGCGCTCCACGCGAGTCTCCAGGAAAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: HLAQQLGLGAHK*VALHASLQEST Trigger: CGTGCTTTCCTGGAGACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | CCCCTGCGGCCACAAAGATGCGGCCGTCATGGACCGTaGCCCCAAAGAGCGATCGGGCTGTCTGCATGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PLRPQRCGRHGP*PQRAIGLSAWV Trigger: CACCCATGCAGACAGCCCGATCGCTCTTTGGGGCCACGGTCCATGACGGCCGCATCTTTGTGGCCGCAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | TCCTTCACCATCTGCACCTTGCGCAACAGCTCGGGCTaGGAGCGCACAAGTGGGTGGCGCTCCACGCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFTICTLRNSSG*ERTSGWRSTRV Trigger: GACTCGCGTGGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | GGATCTGGGTGGACAGGGATGCACAGTAGCACTCGTTaGCGGCTGGGTCGTAAGCCACGGCGCCTTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSGWTGMHSSTR*RLGRKPRRLPR Trigger: GCGAGGAAGGCGCCGTGGCTTACGACCCAGCCGCCAACGAGTGCTACTGTGCATCCCTGTCCACCCAGATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | TCTGTCACCCCTGCGGCCACAAAGATGCGGCCGTCATaGACCGTGGCCCCAAAGAGCGATCGGGCTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVTPAATKMRPS*TVAPKSDRAVC Trigger: GCAGACAGCCCGATCGCTCTTTGGGGCCACGGTCCATGACGGCCGCATCTTTGTGGCCGCAGGGGTGACAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | GGCGGCCCTCATGTGCATCCTTCACCATCTGCACCTTaGGCAACAGCTCGGGCTGGGAGCGCACAAGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGPHVHPSPSAP*ATARAGSAQVG Trigger: ACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 72 bp | AGGCGGCCCTCATGTGCATCCTTCACCATCTGCACCTaGCGCAACAGCTCGGGCTGGGAGCGCACAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPSCASFTICT*RNSSGWERTSG Trigger: CCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 90 bp | AGTGTAGTGAGGCGGCCCTCATGTGCATCCTTCACCATCTGCACCTaGCGCAACAGCTCGGGCTGGGAGCGCACAAGTGGGTGGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVVRRPSCASFTICT*RNSSGWERTSGWRS Trigger: GGAGCGCCACCCACTTGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCCTCACTACACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 90 bp | CACGGGAACTCGCGCTCACCCACGCGCACTACACAGTCTAGGAACTaGCCGTGGTCCAGCATGTCCTTGAGGCCGTCTTGCAGGAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HGNSRSPTRTTQSRN*PWSSMSLRPSCRSV Trigger: GACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTGTAGTGCGCGTGGGTGAGCGCGAGTTCCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | GTAGTGAGGCGGCCCTCATGTGCATCCTTCACCATCTaGACCTTGCGCAACAGCTCGGGCTGGGAGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: VVRRPSCASFTI*TLRNSSGWERT Trigger: TGTGCGCTCCCAGCCCGAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCCTCACTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | AGCATGTCCTTGAGGCCGTCTTGCAGGAGCGTCTGCTaGTACAGACGCTGTTCCTCCGCCTGCTCCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SMSLRPSCRSVC*YRRCSSACSKP Trigger: GGGCTTGGAGCAGGCGGAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | TCCCGGGCAGTACTCGTTCCTCATCGTCCTCAGCCTTaGTGTCTTCTGTGCCCTGGTTGGCCTCCTTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SRAVLVPHRPQP*CLLCPGWPPWP Trigger: GGGCCAAGGAGGCCAACCAGGGCACAGAAGACACCAAGGCTGAGGACGATGAGGAACGAGTACTGCCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | GGTGGACAGGGATGCACAGTAGCACTCGTTGGCGGCTaGGTCGTAAGCCACGGCGCCTTCCTCGCTGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGQGCTVALVGG*VVSHGAFLADH Trigger: ATGATCAGCGAGGAAGGCGCCGTGGCTTACGACCCAGCCGCCAACGAGTGCTACTGTGCATCCCTGTCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 90 bp | GCCCAGCGCATCACAGCCTCAAACACTGCCTCCTCCTTCTCTACGTaGAGGCCGTCGCTGGAGATGATGGCGATCAGCTCGTCAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AQRITASNTASSFST*RPSLEMMAISSSAE Trigger: CTCGGCTGACGAGCTGATCGCCATCATCTCCAGCGACGGCCTCAACGTAGAGAAGGAGGAGGCAGTGTTTGAGGCTGTGATGCGCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | TCCAGCATGTCCTTGAGGCCGTCTTGCAGGAGCGTCTaGTGGTACAGACGCTGTTCCTCCGCCTGCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSMSLRPSCRSV*WYRRCSSACSK Trigger: CTTGGAGCAGGCGGAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | CTCGTTCCTCATCGTCCTCAGCCTTGGTGTCTTCTGTaGCCTGGTTGGCCTCCTTGGCCCGAGCTGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVPHRPQPWCLL*PGWPPWPELSA Trigger: AGCAGACAGCTCGGGCCAAGGAGGCCAACCAGGGCACAGAAGACACCAAGGCTGAGGACGATGAGGAACGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | AACTTGCCGTGGTCCAGCATGTCCTTGAGGCCGTCTTaGAGGAGCGTCTGCTGGTACAGACGCTGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLPWSSMSLRPS*RSVCWYRRCSS Trigger: GGAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | GGGATCTGGAATCGATGCGCCGCGGCAAACAGGTCTTaGACGCTTGCCTCATCCAGCGCGATCTCTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: GIWNRCAAANRS*TLASSSAISDV Trigger: CACATCAGAGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCCAGATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | TCACCCACGCGCACTACACAGTCTAGGAACTTGCCGTaGTCCAGCATGTCCTTGAGGCCGTCTTGCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPTRTTQSRNLP*SSMSLRPSCRS Trigger: GCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTGTAGTGCGCGTGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 72 bp | GAACTTGCCGTGGTCCAGCATGTCCTTGAGGCCGTCTaGCAGGAGCGTCTGCTGGTACAGACGCTGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELAVVQHVLEAV*QERLLVQTLFL Trigger: GAGGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 90 bp | ACGCGCACTACACAGTCTAGGAACTTGCCGTGGTCCAGCATGTCCTaGAGGCCGTCTTGCAGGAGCGTCTGCTGGTACAGACGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRTTQSRNLPWSSMS*RPSCRSVCWYRRCS Trigger: GGAACAGCGTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTGTAGTGCGCGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 90 bp | ACGGGATCTGGAATCGATGCGCCGCGGCAAACAGGTCTTGCACGCTaGCCTCATCCAGCGCGATCTCTGATGTGTACAGGTAGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGSGIDAPRQTGLAR*PHPARSLMCTGSAA Trigger: TGCTGCACTACCTGTACACATCAGAGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCCAGATCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | CACAGTCTAGGAACTTGCCGTGGTCCAGCATGTCCTTaGGGCCGTCTTGCAGGAGCGTCTGCTGGTACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HSLGTCRGPACP*GRLAGASAGTD Trigger: GTCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | ACGCAGATGGTGAAGATGGACGGGATCTGGAATCGATaGGCCGCGGCAAACAGGTCTTGCACGCTTGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TQMVKMDGIWNR*AAANRSCTLAS Trigger: TGAGGCAAGCGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCCAGATCCCGTCCATCTTCACCATCTGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 72 bp | GGAATCGATGCGCCGCGGCAAACAGGTCTTGCACGCTaGCCTCATCCAGCGCGATCTCTGATGTGTACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GIDAPRQTGLAR*PHPARSLMCTG Trigger: ACCTGTACACATCAGAGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 72 bp | TCAGCCTTGGTGTCTTCTGTGCCCTGGTTGGCCTCCTaGGCCCGAGCTGTCTGCTCACCCTTTTCCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SALVSSVPWLAS*ARAVCSPFSFF Trigger: GAAGAAGGAAAAGGGTGAGCAGACAGCTCGGGCCAAGGAGGCCAACCAGGGCACAGAAGACACCAAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | CAGGTCTTGCACGCTTGCCTCATCCAGCGCGATCTCTaGTGTGTACAGGTAGTGCAGCACCTGGGACACTAC | + |
|
Preference number: 6 (lower is better) Translates to: QVLHACLIQRDL*CVQVVQHLGHY Trigger: GTAGTGTCCCAGGTGCTGCACTACCTGTACACATCAGAGATCGCGCTGGATGAGGCAAGCGTGCAAGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | CGGCCACGAAGACTTGGTTCTCCTTGGTCACCAGACTaGCATGGTTCTTGGGGATCTGGGTGGACAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RPRRLGSPWSPD*HGSWGSGWTGM Trigger: CATCCCTGTCCACCCAGATCCCCAAGAACCATGTCAGTCTGGTGACCAAGGAGAACCAAGTCTTCGTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | CTTCTTCTTGCGCAGTGTAGTGAGGCGGCCCTCATGTaGATCCTTCACCATCTGCACCTTGCGCAACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLAQCSEAALM*ILHHLHLAQQL Trigger: GAGCTGTTGCGCAAGGTGCAGATGGTGAAGGATGCACATGAGGGCCGCCTCACTACACTGCGCAAGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS GCA 72 bp | TCATGGACCGTGGCCCCAAAGAGCGATCGGGCTGTCTaGATGGGTGCTAGCTCCTTCCACTCAAACTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWTVAPKSDRAV*MGASSFHSNFL Trigger: CAAGAAGTTTGAGTGGAAGGAGCTAGCACCCATGCAGACAGCCCGATCGCTCTTTGGGGCCACGGTCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CCA 72 bp | AGAAACGACACGCAGATGGTGAAGATGGACGGGATCTaGAATCGATGCGCCGCGGCAAACAGGTCTTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RNDTQMVKMDGI*NRCAAANRSCT Trigger: CGTGCAAGACCTGTTTGCCGCGGCGCATCGATTCCAGATCCCGTCCATCTTCACCATCTGCGTGTCGTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS CAA 72 bp | ACACAGTCTAGGAACTTGCCGTGGTCCAGCATGTCCTaGAGGCCGTCTTGCAGGAGCGTCTGCTGGTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TQSRNLPWSSMS*RPSCRSVCWYR Trigger: TCTGTACCAGCAGACGCTCCTGCAAGACGGCCTCAAGGACATGCTGGACCACGGCAAGTTCCTAGACTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | GATCCTGAAGGAACATGCCGAAGCGCAGAGTGTCATTaGGGATCCCGGGCAGTACTCGTTCCTCATCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPEGTCRSAECH*GSRAVLVPHRP Trigger: AGGACGATGAGGAACGAGTACTGCCCGGGATCCTCAATGACACTCTGCGCTTCGGCATGTTCCTTCAGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | ACGGCGCCTTCCTCGCTGATCATGAAGATGAGATCCTaGAGGAACATGCCGAAGCGCAGAGTGTCATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAPSSLIMKMRS*RNMPKRRVSLR Trigger: CCTCAATGACACTCTGCGCTTCGGCATGTTCCTTCAGGATCTCATCTTCATGATCAGCGAGGAAGGCGCCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | GGAGGTCCACTTGTTGTCTGCAATGCTGTACACCTCTaGAGAGCTGGTAAGTCCTGTGTCTGTCACCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGPLVVCNAVHL*RAGKSCVCHPC Trigger: GCAGGGGTGACAGACACAGGACTTACCAGCTCTTCAGAGGTGTACAGCATTGCAGACAACAAGTGGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CAA 90 bp | CTCCTTGTTGTCCTCATTGTAGAAGAGGCCACCGGCCACGAAGACTaGGTTCTCCTTGGTCACCAGACTGACATGGTTCTTGGGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLVVLIVEEATGHED*VLLGHQTDMVLGDL Trigger: CAGATCCCCAAGAACCATGTCAGTCTGGTGACCAAGGAGAACCAAGTCTTCGTGGCCGGTGGCCTCTTCTACAATGAGGACAACAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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| CDS TCA 72 bp | ACTTTTTCTCATCCTCGTTGTATCTCCAGATGTCATTaGGCTCCGTGGGGACCAGCTCTCCAGACTCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TFSHPRCISRCH*APWGPALQTPS Trigger: AGACGGAGTCTGGAGAGCTGGTCCCCACGGAGCTCAATGACATCTGGAGATACAACGAGGATGAGAAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
||
| CDS CCA 72 bp | TCTGCATGGGTGCTAGCTCCTTCCACTCAAACTTCTTaGGGTCGTAGACACACATCTTGTTCAGACATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAWVLAPSTQTS*GRRHTSCSDIS Trigger: GGAAATGTCTGAACAAGATGTGTGTCTACGACCCCAAGAAGTTTGAGTGGAAGGAGCTAGCACCCATGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098272.4 |
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