Pregenerated sensors for KLHL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025597Ensembl transcript IDs: ENSMUST00000040504.12, ENSMUST00000113371.8, ENSMUST00000133447.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAATCACCTTCAAATATTaGCCACTACCAAATATCCAC | + |
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Preference number: 2 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEITFKY*PLPNIH Trigger: GTGGATATTTGGTAGTGGGCAATATTTGAAGGTGAT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAACATCACCTTCAAATATaGCCCACTACCAAATATCCA | + |
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Preference number: 3 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEHHLQI*PTTKYP Trigger: TGGATATTTGGTAGTGGGCAATATTTGAAGGTGATG...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAAGTGGTTCTTCAACCTaGCCTGCACCGGGGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMESGSST*PAPGSL Trigger: GAGGGACCCCGGTGCAGGGCAGGTTGAAGAACCACT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR GCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCTTCAACCTGCCCTaGACCGGGGTCCCTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTFFNLP*TGVPLC Trigger: GCATAGAGGGACCCCGGTGCAGGGCAGGTTGAAGAA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATTCTTCAACCTGCCCTaGACCGGGGTCCCTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEFFNLP*TGVPLC Trigger: GCATAGAGGGACCCCGGTGCAGGGCAGGTTGAAGAA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGATGGGTAGGGGCTaGTCCTGGTACTGGCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTLMGRG*SWYWRQ Trigger: CTGACGCCAGTACCAGGACCAGCCCCTACCCATCAA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTTGGTCCTTCAAGTGTaGCTACGCCTAGCCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNILVLQV*LRLARA Trigger: GGCACGGGCTAGGCGTAGCCACACTTGAAGGACCAA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATTGGTCCTTCAAGTGTaGCTACGCCTAGCCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMELVLQV*LRLARA Trigger: GGCACGGGCTAGGCGTAGCCACACTTGAAGGACCAA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTCCGTTTCTGTCCCGTaGGTGGTTCTTCAACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNISVSVP*VVLQPA Trigger: GGCAGGTTGAAGAACCACTCACGGGACAGAAACGGA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATCCGTTTCTGTCCCGTaGGTGGTTCTTCAACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMESVSVP*VVLQPA Trigger: GGCAGGTTGAAGAACCACTCACGGGACAGAAACGGA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGGAGCAGGGGCATCATaGCCCCCTACAACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIGAGAS*PPTTYK Trigger: CTTGTATGTTGTAGGGGGTCATGATGCCCCTGCTCC...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGGAGCAGGGGCATCATaGCCCCCTACAACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTGAGAS*PPTTYK Trigger: CTTGTATGTTGTAGGGGGTCATGATGCCCCTGCTCC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR GCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTCCAAGGGGGCACACTaGAACAGCATCTCGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNISKGAH*NSISRN Trigger: GTTCCTCGAGATGCTGTTGCAGTGTGCCCCCTTGGA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR GCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATCCAAGGGGGCACACTaGAACAGCATCTCGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTSKGAH*NSISRN Trigger: GTTCCTCGAGATGCTGTTGCAGTGTGCCCCCTTGGA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCACCTCCACGTCTTTTaGACATCGGGGCACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIHLHVF*TSGHTD Trigger: GTCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACACCTCCACGTCTTTTaGACATCGGGGCACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTHLHVF*TSGHTD Trigger: GTCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCATCTCCAAATCTCGTaGGCGCTTCTCACAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIHLQIS*ALLTSL Trigger: GAGGCTTGTGAGAAGCGCTCACGAGATTTGGAGATG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACATCTCCAAATCTCGTaGGCGCTTCTCACAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTHLQIS*ALLTSL Trigger: GAGGCTTGTGAGAAGCGCTCACGAGATTTGGAGATG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATCATATCCTTCCTGCTaGAGGCAGCTTCCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMESYPSC*RQLPVF Trigger: GAACACTGGAAGCTGCCTTCAGCAGGAAGGATATGA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAATCAGACACAGCACTaGGAACCAATCGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTNQTQH*EPIGEL Trigger: CAGCTCACCGATTGGTTCTCAGTGCTGTGTCTGATT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGAGGGCTTTGCAACATaGACCTTCTCTCAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTEGFAT*TFSQAR Trigger: TCTTGCCTGAGAGAAGGTCCATGTTGCAAAGCCCTC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAGAGGGCTTTGCAACATaGACCTTCTCTCAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEEGFAT*TFSQAR Trigger: TCTTGCCTGAGAGAAGGTCCATGTTGCAAAGCCCTC...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAAGTGCCCCCACAGTTaGTTTTCTAGGCTTTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTKCPHS*FSRLCT Trigger: CGTACAAAGCCTAGAAAATCAACTGTGGGGGCACTT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAAGTGCCCCCACAGTTaGTTTTCTAGGCTTTGTACG | + |
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Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIKCPHS*FSRLCT Trigger: CGTACAAAGCCTAGAAAATCAACTGTGGGGGCACTT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAAAGTGCCCCCACAGTTaGTTTTCTAGGCTTTGTACG | + |
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Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEKCPHS*FSRLCT Trigger: CGTACAAAGCCTAGAAAATCAACTGTGGGGGCACTT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAGTAAGAAAGCAGCTTTaGCAGATCTCGTTGCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEVRKQL*QISLPS Trigger: GCTAGGCAACGAGATCTGGCAAAGCTGCTTTCTTAC...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGGCGTCAGTATATCGTaGTGGACAGGACTATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIGVSIS*WTGLLL Trigger: AAGCAATAGTCCTGTCCACCACGATATACTGACGCC...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGGCGTCAGTATATCGTaGTGGACAGGACTATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTGVSIS*WTGLLL Trigger: AAGCAATAGTCCTGTCCACCACGATATACTGACGCC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTCCAACCGCATACATTaGTCCTTCAAGTGTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNISNRIH*SFKCGY Trigger: GTAGCCACACTTGAAGGACCAATGTATGCGGTTGGA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATCCAACCGCATACATTaGTCCTTCAAGTGTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTSNRIH*SFKCGY Trigger: GTAGCCACACTTGAAGGACCAATGTATGCGGTTGGA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCAAACATCAATGACCTaGGTCAGCTGTAAGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIQTSMT*VSCKRQ Trigger: CTGTCTCTTACAGCTGACTCAGGTCATTGATGTTTG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTGCAGCAAACATCAATaGCCTGAGTCAGCTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNICSKHQ*PESAVR Trigger: TCTTACAGCTGACTCAGGTCATTGATGTTTGCTGCA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATGCAGCAAACATCAATaGCCTGAGTCAGCTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMECSKHQ*PESAVR Trigger: TCTTACAGCTGACTCAGGTCATTGATGTTTGCTGCA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR GCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGGTGGACAGGACTATTaGTTTTCTTCAGTCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTGGQDY*FSSVRF Trigger: GAAACGGACTGAAGAAAAGCAATAGTCCTGTCCACC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAGGTGGACAGGACTATTaGTTTTCTTCAGTCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEGGQDY*FSSVRF Trigger: GAAACGGACTGAAGAAAAGCAATAGTCCTGTCCACC...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
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| CDS-3UTR GCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACAACAACTCCAACTGTaGTTCTTGGAGTTGACATGC | + |
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Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTQQLQL*FLELTC Trigger: GCATGTCAACTCCAAGAAGCACAGTTGGAGTTGTTG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR GCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCAACAACTCCAACTGTaGTTCTTGGAGTTGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIQQLQL*FLELTC Trigger: GCATGTCAACTCCAAGAAGCACAGTTGGAGTTGTTG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAGGTTCCTCAACACATaGTCCTGCTCTCATATCTTC | + |
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Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTRFLNT*SCSHIF Trigger: GAAGATATGAGAGCAGGACCATGTGTTGAGGAACCT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGGTTCCTCAACACATaGTCCTGCTCTCATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIRFLNT*SCSHIF Trigger: GAAGATATGAGAGCAGGACCATGTGTTGAGGAACCT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTTGGAGTTGACATGCTaGCCACATAATTCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNILELTC*PHNSTD Trigger: GTCAGTGGAATTATGTGGCCAGCATGTCAACTCCAA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATCTCACAAGCCTCTTTaGGCAAATTTCCTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTSHKPL*ANFLLE Trigger: TTCCAGAAGGAAATTTGCTCAAAGAGGCTTGTGAGA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATCTCACAAGCCTCTTTaGGCAAATTTCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMESHKPL*ANFLLE Trigger: TTCCAGAAGGAAATTTGCTCAAAGAGGCTTGTGAGA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTCTCACAAGCCTCTTTaGGCAAATTTCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNISHKPL*ANFLLE Trigger: TTCCAGAAGGAAATTTGCTCAAAGAGGCTTGTGAGA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCTACTCCTTCTATTTTaGCCTCTTCTTGTCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNILLLLF*PLLVWL Trigger: AAGCCAGACAAGAAGAGGTCAAAATAGAAGGAGTAG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACTACTCCTTCTATTTTaGCCTCTTCTTGTCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTLLLLF*PLLVWL Trigger: AAGCCAGACAAGAAGAGGTCAAAATAGAAGGAGTAG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGGCAGTTTGAAGGGTaGAGTTGCTTTATGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIRQFEG*SCFMRK Trigger: TTTCCTCATAAAGCAACTTCACCCTTCAAACTGCCT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAGGCAGTTTGAAGGGTaGAGTTGCTTTATGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTRQFEG*SCFMRK Trigger: TTTCCTCATAAAGCAACTTCACCCTTCAAACTGCCT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACTCTCAGGCAAGAGATaGTACTTCATAGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTLSGKR*YFIASI Trigger: AATGGAAGCTATGAAGTATCATCTCTTGCCTGAGAG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAACTCTCAGGCAAGAGATaGTACTTCATAGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMELSGKR*YFIASI Trigger: AATGGAAGCTATGAAGTATCATCTCTTGCCTGAGAG...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAACTCCACTTGTTAGTATaGGGGTCAAAGAATTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMELHLLV*GSKNSM Trigger: CATGGAATTCTTTGACCCGCATACTAACAAGTGGAG...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR GCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCTCCACTTGTTAGTATaGGGGTCAAAGAATTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNILHLLV*GSKNSM Trigger: CATGGAATTCTTTGACCCGCATACTAACAAGTGGAG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR GCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCACAACAACAACACATaGTCCAGCTCTTCCAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIHNNNT*SSSSNV Trigger: AACATTGGAAGAGCTGGAGCATGTGTTGTTGTTGTG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACACAACAACAACACATaGTCCAGCTCTTCCAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTHNNNT*SSSSNV Trigger: AACATTGGAAGAGCTGGAGCATGTGTTGTTGTTGTG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGTCAGTATATCGTGGTaGACAGGACTATTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTVSISW*TGLLLF Trigger: GAAAAGCAATAGTCCTGTCCACCACGATATACTGAC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGTCAGTATATCGTGGTaGACAGGACTATTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIVSISW*TGLLLF Trigger: GAAAAGCAATAGTCCTGTCCACCACGATATACTGAC...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGGTGAAGTTGCTTTATaGGGAAATTGCAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTGEVAL*GNCSKH Trigger: ATGTTTGCTGCAATTTCCTCATAAAGCAACTTCACC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGGTGAAGTTGCTTTATaGGGAAATTGCAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIGEVAL*GNCSKH Trigger: ATGTTTGCTGCAATTTCCTCATAAAGCAACTTCACC...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAATTACCACTGAAGAATaGACTGTTTTCCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTITTEE*TVFQIC Trigger: GCAGATCTGGAAAACAGTTCATTCTTCAGTGGTAAT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTATTACCACTGAAGAATaGACTGTTTTCCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIITTEE*TVFQIC Trigger: GCAGATCTGGAAAACAGTTCATTCTTCAGTGGTAAT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATCTGCAAGCAACCACTaGATAAGAGCATGGAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMESASNH*IRAWKI Trigger: AATTTTCCATGCTCTTATGCAGTGGTTGCTTGCAGA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAGTGTCTTCATTTGCTTaGAGATGTACTATCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEVSSFA*RCTITF Trigger: AAACGTGATAGTACATCTTCAAGCAAATGAAGACAC...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGTGTCTTCATTTGCTTaGAGATGTACTATCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTVSSFA*RCTITF Trigger: AAACGTGATAGTACATCTTCAAGCAAATGAAGACAC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAATTCCAGATTACCACTaGAGAATGAACTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEIPDYH*RMNCFP Trigger: TGGAAAACAGTTCATTCTTCAGTGGTAATCTGGAAT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAATTCCAGATTACCACTaGAGAATGAACTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTIPDYH*RMNCFP Trigger: TGGAAAACAGTTCATTCTTCAGTGGTAATCTGGAAT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTATTCCAGATTACCACTaGAGAATGAACTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNIIPDYH*RMNCFP Trigger: TGGAAAACAGTTCATTCTTCAGTGGTAATCTGGAAT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAACAGCAAATTTTCAATaGTGTCTTCTCTCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMETANFQ*CLLSVA Trigger: TGCAACTGAGAGAAGACACCATTGAAAATTTGCTGT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTACAGCAAATTTTCAATaGTGTCTTCTCTCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNITANFQ*CLLSVA Trigger: TGCAACTGAGAGAAGACACCATTGAAAATTTGCTGT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| 3UTR CAA 72 bp | TTGACAAATGTGAGGTATTATCAGCAATGTAAGGTATaGTTTGGAAACCAGATGGAATGCTTAAAGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTNVRYYQQCKV*FGNQMECLKFL Trigger: CAGAAACTTTAAGCATTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGTCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAAGCAGCAGGAATTCTTaGTTCTTTATTACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TNVRYYQQCKVLFGNQMESSRNS*FFITSM Trigger: CATTGATGTAATAAAGAACCAAGAATTCCTGCTGCT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAGCAGCAGGAATTCTTaGTTCTTTATTACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: IHHLQILPTTKYPPGILTSSRNS*FFITSM Trigger: CATTGATGTAATAAAGAACCAAGAATTCCTGCTGCT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CCA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGCAGCAGGAATTCTTaGTTCTTTATTACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSNIAHYQISTRYFNISSRNS*FFITSM Trigger: CATTGATGTAATAAAGAACCAAGAATTCCTGCTGCT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS GCA 90 bp | TGCTTTTCTTCAGTCCGTTTCTGTCCCGTGAGTGGTTCTTCAACCTaGCCTGCACCGGGGTCCCTCTATGCTCATATCCTTCCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CFSSVRFCPVSGSST*PAPGSLYAHILPAE Trigger: TTCAGCAGGAAGGATATGAGCATAGAGGGACCCCGGTGCAGGGCAGGTTGAAGAACCACTCACGGGACAGAAACGGACTGAAGAAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS GCA 90 bp | CTGGTCCTGGTACTGGCGTCAGTATATCGTGGTGGACAGGACTATTaGTTTTCTTCAGTCCGTTTCTGTCCCGTGAGTGGTTCTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVLASVYRGGQDY*FSSVRFCPVSGSST Trigger: GGTTGAAGAACCACTCACGGGACAGAAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CCA 90 bp | CCAATTCTGAAGGACTCTTTGATGGGTAGGGGCTGGTCCTGGTACTaGCGTCAGTATATCGTGGTGGACAGGACTATTGCTTTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PILKDSLMGRGWSWY*RQYIVVDRTIAFLQ Trigger: CTGAAGAAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS CCA 90 bp | TTGGTGCCAATTCTGAAGGACTCTTTGATGGGTAGGGGCTGGTCCTaGTACTGGCGTCAGTATATCGTGGTGGACAGGACTATTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVPILKDSLMGRGWS*YWRQYIVVDRTIAF Trigger: AAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGGCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS CCA 90 bp | CCTGAGTCAGCTGTAAGAGACAGGCTGCTGACAGCAAATTTTCAATaGTGTCTTCTCTCAGTTGCAGCACACCTGTATAAGCATACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PESAVRDRLLTANFQ*CLLSVAAHLYKHTA Trigger: TGCAGTATGCTTATACAGGTGTGCTGCAACTGAGAGAAGACACCATTGAAAATTTGCTGTCAGCAGCCTGTCTCTTACAGCTGACTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS TCA 90 bp | ATTACATCAATGAAGTGTTCCATGGCATACTTATGTGCCACATTCTaGAGCTCCATACAGCCCTGTGCATCTCCAAATGAGCGAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ITSMKCSMAYLCATF*SSIQPCASPNERIP Trigger: AGGGATTCGCTCATTTGGAGATGCACAGGGCTGTATGGAGCTTCAGAATGTGGCACATAAGTATGCCATGGAACACTTCATTGATGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAACACCTCCACGTCTTTaGGACATCGGGGCACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TNVRYYQQCKVLFGNQMETPPRL*DIGAHR Trigger: TCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTGT...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAACACCTCCACGTCTTTaGGACATCGGGGCACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTTPPRL*DIGAHR Trigger: TCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTGT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTATTCTGAAGGACTCTTaGATGGGTAGGGGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIILKDS*MGRGWS Trigger: GGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAAT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS GCA 90 bp | ATTAGAACTGGTGGTCATTTGTTCAGGTTCCTCAACACATGGTCCTaGTCTCATATCTTCTATATTGTCATCACCCATCATCTCCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: IRTGGHLFRFLNTWS*SHIFYIVITHHLQI Trigger: GATTTGGAGATGATGGGTGATGACAATATAGAAGATATGAGAGCAGGACCATGTGTTGAGGAACCTGAACAAATGACCACCAGTTCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGGTGTCTTCTCTCAGTaGCAGCACACCTGTATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIGVFSQ*QHTCIS Trigger: GCTTATACAGGTGTGCTGCAACTGAGAGAAGACACC...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACTCCAACCGCATACATaGGTCCTTCAAGTGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTLQPHT*VLQVWL Trigger: TAGCCACACTTGAAGGACCAATGTATGCGGTTGGAG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTCTCCAACCGCATACATaGGTCCTTCAAGTGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNILQPHT*VLQVWL Trigger: TAGCCACACTTGAAGGACCAATGTATGCGGTTGGAG...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS GCA 90 bp | TTTGAGCAAATTTCCTTCTGGAACGGCTTTAGGAGTGTCTTCATTTaGTTGAAGATGTACTATCACGTTTTGTTGGTGCCAATTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FEQISFWNGFRSVFI*LKMYYHVLLVPILK Trigger: CTTCAGAATTGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACTCCTAAAGCCGTTCCAGAAGGAAATTTGCTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGTGTTCGGCGATCCTaGAGAAGGATGACTAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNISVRRS*RRMTKP Trigger: TGGTTTAGTCATCCTTCTCAAGGATCGCCGAACACT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAGTGTTCGGCGATCCTaGAGAAGGATGACTAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTSVRRS*RRMTKP Trigger: TGGTTTAGTCATCCTTCTCAAGGATCGCCGAACACT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGTATCCATTGTGTGTaGCTACTCCTACACCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNISIHCV*LLLHLH Trigger: GTGGAGGTGTAGGAGTAGCAACACACAATGGATACT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS GCA 90 bp | TTTTCTCTCTTTCAAATAGCTTTCCATTTTACAGAGAGTGTAATCTaGATGGCTTCGAGAACGGTAGTGATCATTAGAACTGGTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSLFQIAFHFTESVI*MASRTVVIIRTGGH Trigger: ATGACCACCAGTTCTAATGATCACTACCGTTCTCGAAGCCATGCAGATTACACTCTCTGTAAAATGGAAAGCTATTTGAAAGAGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATGGTGGACAGGACTATaGCTTTTCTTCAGTCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTWWTGL*LFFSPF Trigger: AAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTGGTGGACAGGACTATaGCTTTTCTTCAGTCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIWWTGL*LFFSPF Trigger: AAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAGAACTGGTGGTCATTaGTTCAGGTTCCTCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTRTGGH*FRFLNT Trigger: TGTGTTGAGGAACCTGAACAAATGACCACCAGTTCT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGAACTGGTGGTCATTaGTTCAGGTTCCTCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIRTGGH*FRFLNT Trigger: TGTGTTGAGGAACCTGAACAAATGACCACCAGTTCT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTGAATCCCTAGGCAGTTaGAAGGGTGAAGTTGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIESLGS*KGEVAL Trigger: TAAAGCAACTTCACCCTTCAAACTGCCTAGGGATTC...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGAATCCCTAGGCAGTTaGAAGGGTGAAGTTGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTESLGS*KGEVAL Trigger: TAAAGCAACTTCACCCTTCAAACTGCCTAGGGATTC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATACTATCACGTTTTGTaGGTGCCAATTCTGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEYYHVL*VPILKD Trigger: GTCCTTCAGAATTGGCACCAACAAAACGTGATAGTA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTACTATCACGTTTTGTaGGTGCCAATTCTGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIYYHVL*VPILKD Trigger: GTCCTTCAGAATTGGCACCAACAAAACGTGATAGTA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTTCTCACAAGCCTCTTaGAGCAAATTTCCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIFSQAS*SKFPSG Trigger: TCCAGAAGGAAATTTGCTCAAAGAGGCTTGTGAGAA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATTCTCACAAGCCTCTTaGAGCAAATTTCCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEFSQAS*SKFPSG Trigger: TCCAGAAGGAAATTTGCTCAAAGAGGCTTGTGAGAA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTTATTTTGACCTCTTCTaGTCTGGCTTCAAGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIYFDLF*SGFKHI Trigger: GATGTGCTTGAAGCCAGACAAGAAGAGGTCAAAATA...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATATTTTGACCTCTTCTaGTCTGGCTTCAAGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTYFDLF*SGFKHI Trigger: GATGTGCTTGAAGCCAGACAAGAAGAGGTCAAAATA...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAATATTTTGACCTCTTCTaGTCTGGCTTCAAGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEYFDLF*SGFKHI Trigger: GATGTGCTTGAAGCCAGACAAGAAGAGGTCAAAATA...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTATGTACTATCACGTTTaGTTGGTGCCAATTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNIMYYHV*LVPILK Trigger: CTTCAGAATTGGCACCAACAAAACGTGATAGTACAT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAATGTACTATCACGTTTaGTTGGTGCCAATTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTMYYHV*LVPILK Trigger: CTTCAGAATTGGCACCAACAAAACGTGATAGTACAT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACACTCATATCTTCTATATaGTCATCACCCATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTLISSI*SSPIIS Trigger: GGAGATGATGGGTGATGACAATATAGAAGATATGAG...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAACTCATATCTTCTATATaGTCATCACCCATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNVRYYQQCKVLFGNQMELISSI*SSPIIS Trigger: GGAGATGATGGGTGATGACAATATAGAAGATATGAG...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAAGTGTCTTCATTTGCTaGAAGATGTACTATCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTSVFIC*KMYYHV Trigger: AACGTGATAGTACATCTTCAAGCAAATGAAGACACT...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | TCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACATTAGTGTCTTCATTTGCTaGAAGATGTACTATCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSNIAHYQISTRYFNISVFIC*KMYYHV Trigger: AACGTGATAGTACATCTTCAAGCAAATGAAGACACT...AATGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATCACCTTCAAATATTGCCCACTACCAAATATCCACCAGGTATTTTAACAGTTTTAGTAACCGGATaGAAACATTCCACAGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: IHHLQILPTTKYPPGILTVLVTG*KHSTVF Trigger: GAATACTGTGGAATGTTTCAATCCGGTTACTAAAAC...TGTTAAAATACCTGGTGGATATTTGGTAGTGGGCAATATTTGAAGGTGATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATGTGAGGTATTATCAGCAATGTAAGGTATTGTTTGGAAACCAGATGGAAGTTTTAGTAACCGGATaGAAACATTCCACAGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: TNVRYYQQCKVLFGNQMEVLVTG*KHSTVF Trigger: GAATACTGTGGAATGTTTCAATCCGGTTACTAAAAC...TTCCATCTGGTTTCCAAACAATACCTTACATTGCTGATAATACCTCACATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS GCA 72 bp | CCGTTTCTGTCCCGTGAGTGGTTCTTCAACCTGCCCTaGACCGGGGTCCCTCTATGCTCATATCCTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PFLSREWFFNLP*TGVPLCSYPSC Trigger: GCAGGAAGGATATGAGCATAGAGGGACCCCGGTGCAGGGCAGGTTGAAGAACCACTCACGGGACAGAAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CAA 72 bp | GATAGCTCCATCCATCGTGACCTCCAACCGCATACATaGGTCCTTCAAGTGTGGCTACGCCTAGCCCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSSIHRDLQPHT*VLQVWLRLARA Trigger: GGCACGGGCTAGGCGTAGCCACACTTGAAGGACCAATGTATGCGGTTGGAGGTCACGATGGATGGAGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS TCA 72 bp | AGGACTATTGCTTTTCTTCAGTCCGTTTCTGTCCCGTaGGTGGTTCTTCAACCTGCCCTGCACCGGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RTIAFLQSVSVP*VVLQPALHRGP Trigger: GGGACCCCGGTGCAGGGCAGGTTGAAGAACCACTCACGGGACAGAAACGGACTGAAGAAAAGCAATAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS GCA 72 bp | TCAGTCCGTTTCTGTCCCGTGAGTGGTTCTTCAACCTaGCCTGCACCGGGGTCCCTCTATGCTCATATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVRFCPVSGSST*PAPGSLYAHIL Trigger: AAGGATATGAGCATAGAGGGACCCCGGTGCAGGGCAGGTTGAAGAACCACTCACGGGACAGAAACGGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CCA 72 bp | GTGCCAATTCTGAAGGACTCTTTGATGGGTAGGGGCTaGTCCTGGTACTGGCGTCAGTATATCGTGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPILKDSLMGRG*SWYWRQYIVVD Trigger: GTCCACCACGATATACTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS CAA 90 bp | CTCATATCCTTCCTGCTGAAGGCAGCTTCCAGTGTTCGGCGATCCTaGAGAAGGATGACTAAACCATCTCCAGCGCAGCCTCAGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LISFLLKAASSVRRS*RRMTKPSPAQPQDL Trigger: CAGATCCTGAGGCTGCGCTGGAGATGGTTTAGTCATCCTTCTCAAGGATCGCCGAACACTGGAAGCTGCCTTCAGCAGGAAGGATATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CCA 72 bp | AAGGACTCTTTGATGGGTAGGGGCTGGTCCTGGTACTaGCGTCAGTATATCGTGGTGGACAGGACTATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KDSLMGRGWSWY*RQYIVVDRTIA Trigger: AGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS CCA 72 bp | ATTCTGAAGGACTCTTTGATGGGTAGGGGCTGGTCCTaGTACTGGCGTCAGTATATCGTGGTGGACAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ILKDSLMGRGWS*YWRQYIVVDRT Trigger: AGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS CAA 90 bp | GCTGGTCCTGGTACTGGCGTCAGTATATCGTGGTGGACAGGACTATaGCTTTTCTTCAGTCCGTTTCTGTCCCGTGAGTGGTTCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AGPGTGVSISWWTGL*LFFSPFLSREWFFN Trigger: GTTGAAGAACCACTCACGGGACAGAAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CCA 72 bp | GTAGGGGCTGGTCCTGGTACTGGCGTCAGTATATCGTaGTGGACAGGACTATTGCTTTTCTTCAGTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VGAGPGTGVSIS*WTGLLLFFSPF Trigger: AAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACCAGGACCAGCCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CAA 72 bp | GGTACTGGCGTCAGTATATCGTGGTGGACAGGACTATaGCTTTTCTTCAGTCCGTTTCTGTCCCGTGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGVSISWWTGL*LFFSPFLSREW Trigger: CCACTCACGGGACAGAAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CAA 72 bp | TATCACGTTTTGTTGGTGCCAATTCTGAAGGACTCTTaGATGGGTAGGGGCTGGTCCTGGTACTGGCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: YHVLLVPILKDS*MGRGWSWYWRQ Trigger: CTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGGCACCAACAAAACGTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS GCA 72 bp | GTACTGGCGTCAGTATATCGTGGTGGACAGGACTATTaGTTTTCTTCAGTCCGTTTCTGTCCCGTGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLASVYRGGQDY*FSSVRFCPVSG Trigger: ACCACTCACGGGACAGAAACGGACTGAAGAAAAGCAATAGTCCTGTCCACCACGATATACTGACGCCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 |
||
| CDS CAA 72 bp | CCATTGTGTGTTGCTACTCCTACACCTCCACGTCTTTaGGACATCGGGGCACACAGACTCCACTTGTTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PLCVATPTPPRL*DIGAHRLHLLV Trigger: TACTAACAAGTGGAGTCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTGTAGGAGTAGCAACACACAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
||
| CDS CAA 90 bp | CCTACACCTCCACGTCTTTTGGACATCGGGGCACACAGACTCCACTaGTTAGTATGCGGGTCAAAGAATTCCATGGACTTAAGACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PTPPRLLDIGAHRLH*LVCGSKNSMDLRQE Trigger: TTCCTGTCTTAAGTCCATGGAATTCTTTGACCCGCATACTAACAAGTGGAGTCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | TACAAGTATCCATTGTGTGTTGCTACTCCTACACCTCCACGTCTTTaGGACATCGGGGCACACAGACTCCACTTGTTAGTATGCGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: YKYPLCVATPTPPRL*DIGAHRLHLLVCGS Trigger: TGACCCGCATACTAACAAGTGGAGTCTGTGTGCCCCGATGTCCAAAAGACGTGGAGGTGTAGGAGTAGCAACACACAATGGATACTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 72 bp | CCACGTCTTTTGGACATCGGGGCACACAGACTCCACTaGTTAGTATGCGGGTCAAAGAATTCCATGGACTTA | + |
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Preference number: 6 (lower is better) Translates to: PRLLDIGAHRLH*LVCGSKNSMDL Trigger: TAAGTCCATGGAATTCTTTGACCCGCATACTAACAAGTGGAGTCTGTGTGCCCCGATGTCCAAAAGACGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | AAGATGTACTATCACGTTTTGTTGGTGCCAATTCTGAAGGACTCTTaGATGGGTAGGGGCTGGTCCTGGTACTGGCGTCAGTATATCGTG | + |
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Preference number: 6 (lower is better) Translates to: KMYYHVLLVPILKDS*MGRGWSWYWRQYIV Trigger: CACGATATACTGACGCCAGTACCAGGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGGCACCAACAAAACGTGATAGTACATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS GCA 72 bp | TTGGACATCGGGGCACACAGACTCCACTTGTTAGTATaGGGGTCAAAGAATTCCATGGACTTAAGACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LDIGAHRLHLLV*GSKNSMDLRQE Trigger: TTCCTGTCTTAAGTCCATGGAATTCTTTGACCCGCATACTAACAAGTGGAGTCTGTGTGCCCCGATGTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS GCA 72 bp | ATGACCCCCTACAACATACAAGTATCCATTGTGTGTTaGTACTCCTACACCTCCACGTCTTTTGGACATCGG | + |
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Preference number: 6 (lower is better) Translates to: MTPYNIQVSIVC*YSYTSTSFGHR Trigger: CCGATGTCCAAAAGACGTGGAGGTGTAGGAGTAGCAACACACAATGGATACTTGTATGTTGTAGGGGGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | GGCTTTAGGAGTGTCTTCATTTGCTTGAAGATGTACTATCACGTTTaGTTGGTGCCAATTCTGAAGGACTCTTTGATGGGTAGGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GFRSVFICLKMYYHV*LVPILKDSLMGRGW Trigger: CCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACTCCTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | TCACCCATCATCTCCAAATCTCGTGAGCGCTTCTCACAAGCCTCTTaGAGCAAATTTCCTTCTGGAACGGCTTTAGGAGTGTCTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SPIISKSRERFSQAS*SKFPSGTALGVSSF Trigger: AAATGAAGACACTCCTAAAGCCGTTCCAGAAGGAAATTTGCTCAAAGAGGCTTGTGAGAAGCGCTCACGAGATTTGGAGATGATGGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS TCA 72 bp | ATGAAGTGTTCCATGGCATACTTATGTGCCACATTCTaGAGCTCCATACAGCCCTGTGCATCTCCAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: MKCSMAYLCATF*SSIQPCASPNE Trigger: CTCATTTGGAGATGCACAGGGCTGTATGGAGCTTCAGAATGTGGCACATAAGTATGCCATGGAACACTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 72 bp | TCGAGAACGGTAGTGATCATTAGAACTGGTGGTCATTaGTTCAGGTTCCTCAACACATGGTCCTGCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRTVVIIRTGGH*FRFLNTWSCSH Trigger: ATGAGAGCAGGACCATGTGTTGAGGAACCTGAACAAATGACCACCAGTTCTAATGATCACTACCGTTCTCGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | TTTAGGAGTGTCTTCATTTGCTTGAAGATGTACTATCACGTTTTGTaGGTGCCAATTCTGAAGGACTCTTTGATGGGTAGGGGCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRSVFICLKMYYHVL*VPILKDSLMGRGWS Trigger: GGACCAGCCCCTACCCATCAAAGAGTCCTTCAGAATTGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACTCCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | TGCATGGCTTCGAGAACGGTAGTGATCATTAGAACTGGTGGTCATTaGTTCAGGTTCCTCAACACATGGTCCTGCTCTCATATCTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: CMASRTVVIIRTGGH*FRFLNTWSCSHIFY Trigger: ATAGAAGATATGAGAGCAGGACCATGTGTTGAGGAACCTGAACAAATGACCACCAGTTCTAATGATCACTACCGTTCTCGAAGCCATGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS TCA 72 bp | TGCTTTATGAGGAAATTGCAGCAAACATCAATGACCTaGGTCAGCTGTAAGAGACAGGCTGCTGACAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CFMRKLQQTSMT*VSCKRQAADSK Trigger: TTTGCTGTCAGCAGCCTGTCTCTTACAGCTGACTCAGGTCATTGATGTTTGCTGCAATTTCCTCATAAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS GCA 72 bp | TATTACATCAATGAAGTGTTCCATGGCATACTTATGTaGCACATTCTGAAGCTCCATACAGCCCTGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: YYINEVFHGILM*HILKLHTALCI Trigger: GATGCACAGGGCTGTATGGAGCTTCAGAATGTGGCACATAAGTATGCCATGGAACACTTCATTGATGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 90 bp | GAGCAAATTTCCTTCTGGAACGGCTTTAGGAGTGTCTTCATTTGCTaGAAGATGTACTATCACGTTTTGTTGGTGCCAATTCTGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: EQISFWNGFRSVFIC*KMYYHVLLVPILKD Trigger: GTCCTTCAGAATTGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACTCCTAAAGCCGTTCCAGAAGGAAATTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS GCA 72 bp | ATTTCCTTCTGGAACGGCTTTAGGAGTGTCTTCATTTaGTTGAAGATGTACTATCACGTTTTGTTGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ISFWNGFRSVFI*LKMYYHVLLVP Trigger: TGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACTCCTAAAGCCGTTCCAGAAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 72 bp | TCCTTCTGGAACGGCTTTAGGAGTGTCTTCATTTGCTaGAAGATGTACTATCACGTTTTGTTGGTGCCAATT | + |
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Preference number: 6 (lower is better) Translates to: SFWNGFRSVFIC*KMYYHVLLVPI Trigger: AATTGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACTCCTAAAGCCGTTCCAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS GCA 72 bp | TCTTCCTCCCACAACGTAAAGTTTATTATCAACAACTaGCACTCCAAATTGAAGTCTACGACCACTCATAGT | + |
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Preference number: 6 (lower is better) Translates to: SSSHNVKFIINN*HSKLKSTTTHS Trigger: ACTATGAGTGGTCGTAGACTTCAATTTGGAGTGGCAGTTGTTGATAATAAACTTTACGTTGTGGGAGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS CAA 72 bp | AGTGTCTTCATTTGCTTGAAGATGTACTATCACGTTTaGTTGGTGCCAATTCTGAAGGACTCTTTGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVFICLKMYYHV*LVPILKDSLMG Trigger: ACCCATCAAAGAGTCCTTCAGAATTGGCACCAACAAAACGTGATAGTACATCTTCAAGCAAATGAAGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS TCA 72 bp | GAAGCAGCAGGAATTCTTGGTTCTTTATTACATCAATaGAGTGTTCCATGGCATACTTATGTGCCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: EAAGILGSLLHQ*SVPWHTYVPHS Trigger: AGAATGTGGCACATAAGTATGCCATGGAACACTTCATTGATGTAATAAAGAACCAAGAATTCCTGCTGCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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| CDS GCA 72 bp | TTTCAAATAGCTTTCCATTTTACAGAGAGTGTAATCTaGATGGCTTCGAGAACGGTAGTGATCATTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: FQIAFHFTESVI*MASRTVVIIRT Trigger: AGTTCTAATGATCACTACCGTTCTCGAAGCCATGCAGATTACACTCTCTGTAAAATGGAAAGCTATTTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040504.12 ENSMUST00000113371.8 ENSMUST00000133447.2 |
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