Pregenerated sensors for KLHL38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022357Ensembl transcript IDs: ENSMUST00000022985.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTaGGAGCTGGGTTGCAGTCTCTCCCACCACACAGCCTTTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: TLERVVVLTSLSSMP*ELGCSLSHHTAFWT Trigger: TGTCCAAAAGGCTGTGTGGTGGGAGAGACTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR CAA 90 bp | AGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTaGCAGTCTCTCCCACCACACAGCCTTTTGGACAGAGATAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SGSFDFSQLHAFGAG*QSLPPHSLLDRDKF Trigger: GAACTTATCTCTGTCCAAAAGGCTGTGTGGTGGGAGAGACTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATCCTTTGGAGCTGGGTTaGAGTCTCTCCCACCACACA | + |
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Preference number: 2 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYPLELG*SLSHHT Trigger: TGTGTGGTGGGAGAGACTGCAACCCAGCTCCAAAGG...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR GCA 72 bp | TTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTaGAGTCTCTCCCACCACACAGCCTTTTGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LTSLSSMPLELG*SLSHHTAFWTE Trigger: CTCTGTCCAAAAGGCTGTGTGGTGGGAGAGACTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGCCACCACACAGCCTTTaGGACAGAGATAAGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SGESGSFDFSQLHAFGAGPPHSL*DRDKFL Trigger: CAGGAACTTATCTCTGTCCAAAAGGCTGTGTGGTGG...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTGTCTCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTACTCAGCTCCATGCCTTaGGAGCTGGGTTGCAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SSVSFNAVWAVNQVVNSLLSSMP*ELGCSL Trigger: GAGACTGCAACCCAGCTCCAAAGGCATGGAGCTGAG...TAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGAGACAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR-3UTR CAA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATGTGCAGTTTCTGACATaGATTCAAGGGGTAAGGATG | + |
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Preference number: 3 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYVQFLT*IQGVRM Trigger: CATCCTTACCCCTTGAATCAATGTCAGAAACTGCAC...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGGGGGCCAGCTGGCTCTaGAGGTATGAGGAGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGGASWL*RYEEQA Trigger: GGCCTGCTCCTCATACCTCCAGAGCCAGCTGGCCCC...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGTGGCCATCTCCAGGATaGCCTGGCAAGCAGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQWPSPG*PGKQAR Trigger: CCTCGCCTGCTTGCCAGGCCATCCTGGAGATGGCCA...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCGCACTTTGGCCTCTCTaGTCTCCCGGAAGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERVVVLTSLSSMPLELGCALWPL*SPGSGC Trigger: GCAGCCACTTCCGGGAGAGCAGAGAGGCCAAAGTGC...GCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGTGCTGCAGCAGTTCCTaGATGTGCCTCCACCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQCCSSS*MCLHRA Trigger: AGCCCGGTGGAGGCACATGCAGGAACTGCTGCAGCA...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGTGCAGGCGGACCTGCTaGAGCAGTTCCTGCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQCRRTC*SSSCMC Trigger: GCACATGCAGGAACTGCTGCAGCAGGTCCGCCTGCA...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGGAGGCCAGAAGCTCCTaGCCTTCTCCAGTACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQEARSS*PSPVPP Trigger: TGGGGGTACTGGAGAAGGGCAGGAGCTTCTGGCCTC...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGGACTCTTTCCCTCACTaGCAGTCATGCCCCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGDSFPH*QSCPRA Trigger: TGCTCGGGGGCATGACTGTCAGTGAGGGAAAGAGTC...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGACATCCCTGGTGGTCTaGTGGTTGTCCTTCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQTSLVV*WLSFRP Trigger: GGGACGGAAGGACAACCAGCAGACCACCAGGGATGT...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGCTGCTCTCCCGGAAGTaGCTGCAGAACATGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQLLSRK*LQNMAL Trigger: CAAGGCCATGTTCTGCAGCCACTTCCGGGAGAGCAG...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGGGGGATACTGCAGCATaGCAGCAGCCTCCATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQGDTAA*QQPPSV Trigger: CACTGATGGAGGCTGCTGCCATGCTGCAGTATCCCC...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGAGTCCCTCAGCTCCATaGCGCAGAGCTCCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGSPSAP*RRAPSG Trigger: ACCTGAAGGAGCTCTGCGCCATGGAGCTGAGGGACT...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGTGGAAGAAGGCTGGGTaGATGTACTGCAGGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQWKKAG*MYCRRT Trigger: GGTCCGCCTGCAGTACATCCACCCAGCCTTCTTCCA...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGTGTTCCCCATCACCGTaGCCCCATGGTGCATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQCSPSP*PHGASF Trigger: GAAGGATGCACCATGGGGCCACGGTGATGGGGAACA...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGCGATGTTACAGTCTGTaGTCAGCCGCCGTCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGRCYSL*SAAVHL Trigger: CAGGTGGACGGCGGCTGACCACAGACTGTAACATCG...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTATGTGGGGTATGCACTaGAGGGTCAGGCAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LERVVVLTSLSSMPLELGMWGMH*RVRQAW Trigger: CCATGCCTGCCTGACCCTCCAGTGCATACCCCACAT...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| 3UTR CAA 72 bp | AGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTaGGAGCTGGGTTGCAGTCTCTCCCACCACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RVVVLTSLSSMP*ELGCSLSHHTA Trigger: GGCTGTGTGGTGGGAGAGACTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCCCCCAATGGAGAAGATaGAGTTCCTGTGGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ERVVVLTSLSSMPLELGCPQWRR*SSCGWC Trigger: GCACCACCCACAGGAACTTCATCTTCTCCATTGGGG...GCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGAGGCCCCGGAGCAGATaGTCACATCAGTCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGRPRSR*SHQSGS Trigger: AGATCCTGACTGATGTGAGCATCTGCTCCGGGGCCT...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGCACAGCCACTGGCATaGCAGCCATGCTCTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YSGESGSFDFSQLHAFGAAQPLA*QPCSPR Trigger: TCTGGGAGAGCATGGCTGGCATGCCAGTGGCTGTGC...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGACCGTGGCCCCATGGTaGATCCTTCGGTCTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGTVAPW*ILRSFM Trigger: CATGAAAGACCGAAGGATGCACCATGGGGCCACGGT...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGGTGATGGAAGAAGGCTaGGTGGATGTACTGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQVMEEG*VDVLQA Trigger: CGCCTGCAGTACATCCACCCAGCCTTCTTCCATCAC...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTATCTCCAGGATGGCCTaGCAAGCAGGCGAGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: YSGESGSFDFSQLHAFGAISRMA*QAGEDW Trigger: CCAGTCCTCGCCTGCTTGCCAGGCCATCCTGGAGAT...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTTCCCTGGTGGTCTGCTaGTTGTCCTTCCGTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: YSGESGSFDFSQLHAFGASLVVC*LSFRPP Trigger: TGGGGGACGGAAGGACAACCAGCAGACCACCAGGGA...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTTGCCTCCACCGGGCTTaGAGGTCATGCTTCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: YSGESGSFDFSQLHAFGACLHRA*RSCFTQ Trigger: TTGGGTGAAGCATGACCTTCAAGCCCGGTGGAGGCA...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGGGGCGTCATTGGCAATaGAGTGATGGAAGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQGRHWQ*SDGRRL Trigger: CAGCCTTCTTCCATCACTTCATTGCCAATGACGCCC...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTGTGCAAGGTGACAGCTaGGGCCTTGTACAACCGTAT | + |
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Preference number: 4 (lower is better) Translates to: LERVVVLTSLSSMPLELGVQGDS*GLVQPY Trigger: ATACGGTTGTACAAGGCCTCAGCTGTCACCTTGCAC...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGAGAGCAAGACATCCCTaGTGGTCTGCTGGTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGRARHP*WSAGCP Trigger: AGGACAACCAGCAGACCACCAGGGATGTCTTGCTCT...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTCCAAGTGTCCGTCTCTaGGTCGTAGCAGTCAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LERVVVLTSLSSMPLELGPSVRL*VVAVKG Trigger: TCCTTTGACTGCTACGACCCAGAGACGGACACTTGG...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | TCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTCATTGGCAATGAAGTaGTGGAAGAAGGCTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGESGSFDFSQLHAFGAGSLAMK*WKKAGW Trigger: CCACCCAGCCTTCTTCCATCACTTCATTGCCAATGA...CCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTGTACAGGGTTCTGCATaGTGTCCTCACCCCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LERVVVLTSLSSMPLELGVQGSA*CPHPQK Trigger: TTTTTGGGGGTGAGGACATCATGCAGAACCCTGTAC...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGGTCAAAGAGTTTGTaGGGTAGCTGTCCCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LERVVVLTSLSSMPLELGWSKSL*GSCPWD Trigger: ATCCCAGGGACAGCTACCTCACAAACTCTTTGACCA...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCCTGATGCCTTTCATCTaGACTTTGGCCTCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ERVVVLTSLSSMPLELGCLMPFI*TLASLL Trigger: GAGCAGAGAGGCCAAAGTGCAGATGAAAGGCATCAG...GCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTGTCTCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTAGTGGGAGTAGCGGGCTaGCAGCATGGGCTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSVSFNAVWAVNQVVNSLVGVAG*QHGLPH Trigger: GTGGGGGAGCCCATGCTGGCAGCCCGCTACTCCCAC...TAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGAGACAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGCAAGACATCCCTGGTaGTCTGCTGGTTGTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YSGESGSFDFSQLHAFGAARHPW*SAGCPS Trigger: GGAAGGACAACCAGCAGACCACCAGGGATGTCTTGC...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTCCTTGTACAACCGTATaGGAAGCTTGGCTAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LERVVVLTSLSSMPLELGPCTTV*EAWLGS Trigger: AGAGCCTAGCCAAGCTTCCCATACGGTTGTACAAGG...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTGTCTCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTAAGCGGGCTGCCAGCATaGGCTCCCCCACCCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: SSVSFNAVWAVNQVVNSLSGLPA*APPPST Trigger: AGTGGAGGGTGGGGGAGCCCATGCTGGCAGCCCGCT...TAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGAGACAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGAAGCTGTGGTCTTTaGAGACAACCCCATCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: ERVVVLTSLSSMPLELGCRSCGL*RQPHLV Trigger: TACCAGATGGGGTTGTCTTCAAAGACCACAGCTTCT...GCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGCCAGAGTTGTGGAACTaGTGCCTTTCATCTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQPELWN*CLSSAL Trigger: AAGTGCAGATGAAAGGCATCAGTTCCACAACTCTGG...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGGCTGGGTGGATGTACTaGAGGCGGACCTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMAGWMY*RRTCCS Trigger: GCTGCAGCAGGTCCGCCTGCAGTACATCCACCCAGC...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTGTCTCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTAGGCCCAGGCAATTGCTaGGGGCCAGCTGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVSFNAVWAVNQVVNSLGPGNC*GPAGSG Trigger: TCCAGAGCCAGCTGGCCCCCAGCAATTGCCTGGGCC...TAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGAGACAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGCGCTCCGGTGCAAGGTaGCAGCTGAGGCCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMRSGAR*QLRPCT Trigger: TGTACAAGGCCTCAGCTGTCACCTTGCACCGGAGCG...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGCCACCCTCCACTGGTTaGGTTTCAGAGAAAAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQPPSTG*VSEKRY Trigger: ATATCTTTTCTCTGAAACTCAACCAGTGGAGGGTGG...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCGGGCACACACATTCTTaGTCATCCTTGTCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ERVVVLTSLSSMPLELGCGHTHS*SSLSPF Trigger: AAATGGAGACAAGGATGATCAAGAATGTGTGTGCCC...GCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGTTGCTGGGGGCCAGCTaGCTCTGGAGGTATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMLLGAS*LWRYEE Trigger: CTCCTCATACCTCCAGAGCCAGCTGGCCCCCAGCAA...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGCAAGCAGGCGAGGACTaGAGGAGGGCGTCATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMQAGED*RRASLA Trigger: TGCCAATGACGCCCTCCTCCAGTCCTCGCCTGCTTG...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGCTGGCTCTGGAGGTATaGGGAGCAGGCCTCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMLALEV*GAGLKH Trigger: GTGTTTGAGGCCTGCTCCTCATACCTCCAGAGCCAG...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTAGGAGTTTACAATCCTaGGCACTGGGACCATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSGESGSFDFSQLHAFGARSLQS*ALGPYK Trigger: TTTGTATGGTCCCAGTGCCCAGGATTGTAAACTCCT...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTGTCTCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTAACCGTATGGGAAGCTTaGCTAGGCTCTGCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVSFNAVWAVNQVVNSLTVWEA*LGSATG Trigger: GCCAGTGGCAGAGCCTAGCCAAGCTTCCCATACGGT...TAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGAGACAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATGTGGAGCACAGCCACTaGCATGCCAGCCATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYVEHSH*HASHAL Trigger: GAGAGCATGGCTGGCATGCCAGTGGCTGTGCTCCAC...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATAGTTCCTGTGGGTGGTaGTTCTGTGGGAGTAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYSSCGW*FCGSSG Trigger: CCCGCTACTCCCACAGAAGCACCACCCACAGGAACT...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTGTCTCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATGTCATACCTCTCCATaGAGGCCAGAAGCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVSFNAVWAVNQVVNSLCHTSP*RPEAPA Trigger: GGCAGGAGCTTCTGGCCTCCATGGAGAGGTATGACA...TAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGAGACAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATAGGCGTACAGGGTTCTaGATGATGTCCTCACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYRRTGF*MMSSPP Trigger: TGGGGGTGAGGACATCATGCAGAACCCTGTACGCCT...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR GCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATTTCCCCCAGTACCACTaGAGGGGCACACACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYFPQYH*RGTHIL Trigger: AAGAATGTGTGTGCCCCTGCAGTGGTACTGGGGGAA...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATCTTTCATCTGCACTTTaGCCTCTCTGCTCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYLSSAL*PLCSPG Trigger: TCCGGGAGAGCAGAGAGGCCAAAGTGCAGATGAAAG...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGTGTACCAGGTGTTCCTaGAAATGTGGTAAACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMCTRCS*KCGKPG Trigger: TCCAGGTTTACCACATTTCCAGGAACACCTGGTACA...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATTCAGAGGAGAAGCTGTaGTCTTTGAAGACAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYSEEKL*SLKTTP Trigger: TGGGGTTGTCTTCAAAGACCACAGCTTCTCCTCTGA...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR TCA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATTCATGTCCGCACACTTaGCAAATTTGTTGGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYSCPHT*QICWTE Trigger: CTCAGTCCAACAAATTTGTCAAGTGTGCGGACATGA...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | GCGAGTCTGACTAGGCCCAGGCAATTGCTGGGGGCCAGCTGGCTCTaGAGGTATGAGGAGCAGGCCTCAAACACCCGGGGATACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLTRPRQLLGASWL*RYEEQASNTRGYCS Trigger: GCTGCAGTATCCCCGGGTGTTTGAGGCCTGCTCCTCATACCTCCAGAGCCAGCTGGCCCCCAGCAATTGCCTGGGCCTAGTCAGACTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | CAGGTAGTCCCTCAGCTCCATGGCGCAGAGCTCCTTCAGGTCAGCTaGTGCTGCCACCTCTGGGAAGTAAGTCAGGGCCACCTCCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QVVPQLHGAELLQVS*CCHLWEVSQGHLLR Trigger: GCGAAGGAGGTGGCCCTGACTTACTTCCCAGAGGTGGCAGCATCAGCTGACCTGAAGGAGCTCTGCGCCATGGAGCTGAGGGACTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | TGGCTCTGGAGGTATGAGGAGCAGGCCTCAAACACCCGGGGATACTaGAGCATGGCAGCAGCCTCCATCAGTGGGAGGACGTTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WLWRYEEQASNTRGY*SMAAASISGRTLAA Trigger: AGCTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCCATGCTGCAGTATCCCCGGGTGTTTGAGGCCTGCTCCTCATACCTCCAGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | TCACTGCTACGGCAGGGTGGAGCACAGCCACTGGCATGCCAGCCATaGTCTCCCAGACGTCACGGATGCTGTCATACCTCTCCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLRQGGAQPLACQP*SPRRHGCCHTSPWR Trigger: CCTCCATGGAGAGGTATGACAGCATCCGTGACGTCTGGGAGAGCATGGCTGGCATGCCAGTGGCTGTGCTCCACCCTGCCGTAGCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | GGCTCTGCCACTGGCCAGTCTGTCCACTGTAGAGCAAGACATCCCTaGTGGTCTGCTGGTTGTCCTTCCGTCCCCCAAGGAGGAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSATGQSVHCRARHP*WSAGCPSVPQGGGG Trigger: TCCTCCTCCTCCTTGGGGGACGGAAGGACAACCAGCAGACCACCAGGGATGTCTTGCTCTACAGTGGACAGACTGGCCAGTGGCAGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | AGGCGGACCTGCTGCAGCAGTTCCTGCATGTGCCTCCACCGGGCTTaGAGGTCATGCTTCACCCAAGCCATGAGGGCCTCGAACACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRTCCSSSCMCLHRA*RSCFTQAMRASNTF Trigger: AAAGGTGTTCGAGGCCCTCATGGCTTGGGTGAAGCATGACCTTCAAGCCCGGTGGAGGCACATGCAGGAACTGCTGCAGCAGGTCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | TGGCAAGCAGGCGAGGACTGGAGGAGGGCGTCATTGGCAATGAAGTaGTGGAAGAAGGCTGGGTGGATGTACTGCAGGCGGACCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WQAGEDWRRASLAMK*WKKAGWMYCRRTCC Trigger: GCAGCAGGTCCGCCTGCAGTACATCCACCCAGCCTTCTTCCATCACTTCATTGCCAATGACGCCCTCCTCCAGTCCTCGCCTGCTTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | TGGCCTGGCAAGCAGGCGAGGACTGGAGGAGGGCGTCATTGGCAATaGAGTGATGGAAGAAGGCTGGGTGGATGTACTGCAGGCGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: WPGKQARTGGGRHWQ*SDGRRLGGCTAGGP Trigger: AGGTCCGCCTGCAGTACATCCACCCAGCCTTCTTCCATCACTTCATTGCCAATGACGCCCTCCTCCAGTCCTCGCCTGCTTGCCAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | TTTGGTCCTTCACTGCTACGGCAGGGTGGAGCACAGCCACTGGCATaGCAGCCATGCTCTCCCAGACGTCACGGATGCTGTCATACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FGPSLLRQGGAQPLA*QPCSPRRHGCCHTS Trigger: AGAGGTATGACAGCATCCGTGACGTCTGGGAGAGCATGGCTGGCATGCCAGTGGCTGTGCTCCACCCTGCCGTAGCAGTGAAGGACCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | GGAGGTATGAGGAGCAGGCCTCAAACACCCGGGGATACTGCAGCATaGCAGCAGCCTCCATCAGTGGGAGGACGTTGGCAGCTGAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: GGMRSRPQTPGDTAA*QQPPSVGGRWQLRY Trigger: ATATCTCAGCTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCCATGCTGCAGTATCCCCGGGTGTTTGAGGCCTGCTCCTCATACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | GAGTCTTTGGTCCTTCACTGCTACGGCAGGGTGGAGCACAGCCACTaGCATGCCAGCCATGCTCTCCCAGACGTCACGGATGCTGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: ESLVLHCYGRVEHSH*HASHALPDVTDAVI Trigger: TATGACAGCATCCGTGACGTCTGGGAGAGCATGGCTGGCATGCCAGTGGCTGTGCTCCACCCTGCCGTAGCAGTGAAGGACCAAAGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | GGACTGGAGGAGGGCGTCATTGGCAATGAAGTGATGGAAGAAGGCTaGGTGGATGTACTGCAGGCGGACCTGCTGCAGCAGTTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLEEGVIGNEVMEEG*VDVLQADLLQQFLH Trigger: ATGCAGGAACTGCTGCAGCAGGTCCGCCTGCAGTACATCCACCCAGCCTTCTTCCATCACTTCATTGCCAATGACGCCCTCCTCCAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | GGATGTCCAAGTGTCCGTCTCTGGGTCGTAGCAGTCAAAGGAAGCTaGGTCCTCGATGTTACAGTCTGTGGTCAGCCGCCGTCCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCPSVRLWVVAVKGS*VLDVTVCGQPPSTC Trigger: ACAGGTGGACGGCGGCTGACCACAGACTGTAACATCGAGGACTCAGCTTCCTTTGACTGCTACGACCCAGAGACGGACACTTGGACATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | ACGTCACGGATGCTGTCATACCTCTCCATGGAGGCCAGAAGCTCCTaGCCTTCTCCAGTACCCCCAATGGAGAAGATGAAGTTCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRMLSYLSMEARSS*PSPVPPMEKMKFLW Trigger: CCACAGGAACTTCATCTTCTCCATTGGGGGTACTGGAGAAGGGCAGGAGCTTCTGGCCTCCATGGAGAGGTATGACAGCATCCGTGACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | CATGATGTCCTCACCCCCAAAAAGATAGAGTCTTTGGTCCTTCACTaGTACGGCAGGGTGGAGCACAGCCACTGGCATGCCAGCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HDVLTPKKIESLVLH*YGRVEHSHWHASHA Trigger: AGCATGGCTGGCATGCCAGTGGCTGTGCTCCACCCTGCCGTAGCAGTGAAGGACCAAAGACTCTATCTTTTTGGGGGTGAGGACATCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | TACAATCCTGGGCACTGGGACCATACAAAGAGAAGATCTGTTTCCTaGCCATCTCCAGGATGGCCTGGCAAGCAGGCGAGGACTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YNPGHWDHTKRRSVS*PSPGWPGKQARTGG Trigger: TCCTCCAGTCCTCGCCTGCTTGCCAGGCCATCCTGGAGATGGCCAGGAAACAGATCTTCTCTTTGTATGGTCCCAGTGCCCAGGATTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | GGTCGTAGCAGTCAAAGGAAGCTGAGTCCTCGATGTTACAGTCTGTaGTCAGCCGCCGTCCACCTGTCACGTACAGCTTGTTCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GRSSQRKLSPRCYSL*SAAVHLSRTACSPS Trigger: TGATGGGGAACAAGCTGTACGTGACAGGTGGACGGCGGCTGACCACAGACTGTAACATCGAGGACTCAGCTTCCTTTGACTGCTACGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTCCTGTCACGTACAGCTaGTTCCCCATCACCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LERVVVLTSLSSMPLELGPVTYS*FPITVA Trigger: GGCCACGGTGATGGGGAACAAGCTGTACGTGACAGG...ACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | CTGCAGCATGGCAGCAGCCTCCATCAGTGGGAGGACGTTGGCAGCTaGGATATGAACCTCTCCCGTATACACATACGTAATGACCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQHGSSLHQWEDVGS*DMNLSRIHIRNDLL Trigger: GAGCAGGTCATTACGTATGTGTATACGGGAGAGGTTCATATCTCAGCTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCCATGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | CGTCCACCTGTCACGTACAGCTTGTTCCCCATCACCGTGGCCCCATaGTGCATCCTTCGGTCTTTCATGTCCGCACACTTGACAAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPVTYSLFPITVAP*CILRSFMSAHLTNL Trigger: CAAATTTGTCAAGTGTGCGGACATGAAAGACCGAAGGATGCACCATGGGGCCACGGTGATGGGGAACAAGCTGTACGTGACAGGTGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | CCACCTGTCACGTACAGCTTGTTCCCCATCACCGTGGCCCCATGGTaGATCCTTCGGTCTTTCATGTCCGCACACTTGACAAATTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPVTYSLFPITVAPW*ILRSFMSAHLTNLL Trigger: CAACAAATTTGTCAAGTGTGCGGACATGAAAGACCGAAGGATGCACCATGGGGCCACGGTGATGGGGAACAAGCTGTACGTGACAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 90 bp | AGCTCCTTGGGGGCATGCGCCATAGGAGTTTACAATCCTGGGCACTaGGACCATACAAAGAGAAGATCTGTTTCCTGGCCATCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLGACAIGVYNPGH*DHTKRRSVSWPSPG Trigger: TCCTGGAGATGGCCAGGAAACAGATCTTCTCTTTGTATGGTCCCAGTGCCCAGGATTGTAAACTCCTATGGCGCATGCCCCCAAGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | ATGGCAGCAGCCTCCATCAGTGGGAGGACGTTGGCAGCTGAGATATaGACCTCTCCCGTATACACATACGTAATGACCTGCTCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MAAASISGRTLAAEI*TSPVYTYVMTCSRV Trigger: AACTCTGGAGCAGGTCATTACGTATGTGTATACGGGAGAGGTTCATATCTCAGCTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 90 bp | TACGTAATGACCTGCTCCAGAGTTGTGGAACTGATGCCTTTCATCTaGACTTTGGCCTCTCTGCTCTCCCGGAAGTGGCTGCAGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: YVMTCSRVVELMPFI*TLASLLSRKWLQNM Trigger: CATGTTCTGCAGCCACTTCCGGGAGAGCAGAGAGGCCAAAGTGCAGATGAAAGGCATCAGTTCCACAACTCTGGAGCAGGTCATTACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 90 bp | CCGTGGCCCCATGGTGCATCCTTCGGTCTTTCATGTCCGCACACTTaGCAAATTTGTTGGACTGAGGATCGTAAGCAAGAATCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWPHGASFGLSCPHT*QICWTEDRKQESSL Trigger: CAAGGAGGATTCTTGCTTACGATCCTCAGTCCAACAAATTTGTCAAGTGTGCGGACATGAAAGACCGAAGGATGCACCATGGGGCCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGGGGGCACACACATTCTaGATCATCCTTGTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQGAHTF*IILVSI Trigger: AATGGAGACAAGGATGATCAAGAATGTGTGTGCCCC...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | TACTCTGGAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGAGAAGCTGTGGTCTTaGAAGACAACCCCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YSGESGSFDFSQLHAFGAEKLWS*KTTPSG Trigger: ACCAGATGGGGTTGTCTTCAAAGACCACAGCTTCTC...AGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTCCAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATACTAGGCCCAGGCAATaGCTGGGGGCCAGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYTRPRQ*LGASWL Trigger: GAGCCAGCTGGCCCCCAGCAATTGCCTGGGCCTAGT...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | GAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCAGATCCTTGTCTCCATTTaGTACCAGGTGTTCCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: ESGSFDFSQLHAFGAGLQILVSI*YQVFLE Trigger: TTCCAGGAACACCTGGTACAAAATGGAGACAAGGAT...CTGCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGTGGTAGTTTTGACTTCTCTCAGCTCCATGCCTTTGGAGCTGGGTTGCACATCAGTCAGGATCTaGCTTTGTCTTAAGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: ERVVVLTSLSSMPLELGCTSVRI*LCLKPL Trigger: CAATGGCTTAAGACAAAGCAAGATCCTGACTGATGT...GCAACCCAGCTCCAAAGGCATGGAGCTGAGAGAAGTCAAAACTACCACTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | TCATTTAATGCAGTTTGGGCTGTCAATCAAGTAGTTAACTCCCTATCCAGTTATCTGGTGGTCTGCTGGTaGTCCTTCCGTCCCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SFNAVWAVNQVVNSLSSYLVVCW*SFRPPR Trigger: CCTTGGGGGACGGAAGGACAACCAGCAGACCACCAG...ATAACTGGATAGGGAGTTAACTACTTGATTGACAGCCCAAACTGCATTAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS-3UTR CAA 90 bp | CCCTATCCAGTTATAATAGTGCAGTTTCTGACATTGATTCAAGGGGTAAGGATGAAAAAGATAGAGTCTTaGGTCCTTCACTGCTACGGC | + |
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Preference number: 5 (lower is better) Translates to: PYPVIIVQFLTLIQGVRMKKIES*VLHCYG Trigger: GCCGTAGCAGTGAAGGACCAAAGACTCTATCTTTTT...CATCCTTACCCCTTGAATCAATGTCAGAAACTGCACTATTATAACTGGATAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | CAGGCAATTGCTGGGGGCCAGCTGGCTCTGGAGGTATaGGGAGCAGGCCTCAAACACCCGGGGATACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QAIAGGQLALEV*GAGLKHPGILQ Trigger: CTGCAGTATCCCCGGGTGTTTGAGGCCTGCTCCTCATACCTCCAGAGCCAGCTGGCCCCCAGCAATTGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | AGGAGCAGGCCTCAAACACCCGGGGATACTGCAGCATaGCAGCAGCCTCCATCAGTGGGAGGACGTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSRPQTPGDTAA*QQPPSVGGRWQ Trigger: CTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCCATGCTGCAGTATCCCCGGGTGTTTGAGGCCTGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 90 bp | CAGGCGGACCTGCTGCAGCAGTTCCTGCATGTGCCTCCACCGGGCTaGAAGGTCATGCTTCACCCAAGCCATGAGGGCCTCGAACACCTT | + |
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Preference number: 6 (lower is better) Translates to: QADLLQQFLHVPPPG*KVMLHPSHEGLEHL Trigger: AAGGTGTTCGAGGCCCTCATGGCTTGGGTGAAGCATGACCTTCAAGCCCGGTGGAGGCACATGCAGGAACTGCTGCAGCAGGTCCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | CCTCAGCTCCATGGCGCAGAGCTCCTTCAGGTCAGCTaGTGCTGCCACCTCTGGGAAGTAAGTCAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PQLHGAELLQVS*CCHLWEVSQGH Trigger: GTGGCCCTGACTTACTTCCCAGAGGTGGCAGCATCAGCTGACCTGAAGGAGCTCTGCGCCATGGAGCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | TGCTGCAGCAGTTCCTGCATGTGCCTCCACCGGGCTTaGAGGTCATGCTTCACCCAAGCCATGAGGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: CCSSSCMCLHRA*RSCFTQAMRAS Trigger: CGAGGCCCTCATGGCTTGGGTGAAGCATGACCTTCAAGCCCGGTGGAGGCACATGCAGGAACTGCTGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 72 bp | AGGTATGAGGAGCAGGCCTCAAACACCCGGGGATACTaGAGCATGGCAGCAGCCTCCATCAGTGGGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: RYEEQASNTRGY*SMAAASISGRT Trigger: CGTCCTCCCACTGATGGAGGCTGCTGCCATGCTGCAGTATCCCCGGGTGTTTGAGGCCTGCTCCTCATACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CTGCTGCAGCAGTTCCTGCATGTGCCTCCACCGGGCTaGAAGGTCATGCTTCACCCAAGCCATGAGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLQQFLHVPPPG*KVMLHPSHEGL Trigger: GAGGCCCTCATGGCTTGGGTGAAGCATGACCTTCAAGCCCGGTGGAGGCACATGCAGGAACTGCTGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | GGCGAGGACTGGAGGAGGGCGTCATTGGCAATGAAGTaGTGGAAGAAGGCTGGGTGGATGTACTGCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GEDWRRASLAMK*WKKAGWMYCRR Trigger: CCGCCTGCAGTACATCCACCCAGCCTTCTTCCATCACTTCATTGCCAATGACGCCCTCCTCCAGTCCTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 90 bp | CTGTCACAGCTTAAGATTTCTGCGAGTCTGACTAGGCCCAGGCAATaGCTGGGGGCCAGCTGGCTCTGGAGGTATGAGGAGCAGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LSQLKISASLTRPRQ*LGASWLWRYEEQAS Trigger: TGAGGCCTGCTCCTCATACCTCCAGAGCCAGCTGGCCCCCAGCAATTGCCTGGGCCTAGTCAGACTCGCAGAAATCTTAAGCTGTGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 90 bp | ATGTTACAGTCTGTGGTCAGCCGCCGTCCACCTGTCACGTACAGCTaGTTCCCCATCACCGTGGCCCCATGGTGCATCCTTCGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: MLQSVVSRRPPVTYS*FPITVAPWCILRSF Trigger: GAAAGACCGAAGGATGCACCATGGGGCCACGGTGATGGGGAACAAGCTGTACGTGACAGGTGGACGGCGGCTGACCACAGACTGTAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | TCATGCCCCCGAGCACATAGACGCTCCGGTGCAAGGTaGCAGCTGAGGCCTTGTACAACCGTATGGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SCPRAHRRSGAR*QLRPCTTVWEA Trigger: AGCTTCCCATACGGTTGTACAAGGCCTCAGCTGTCACCTTGCACCGGAGCGTCTATGTGCTCGGGGGCATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | GTCCACCTGTCACGTACAGCTTGTTCCCCATCACCGTaGCCCCATGGTGCATCCTTCGGTCTTTCATGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VHLSRTACSPSP*PHGASFGLSCP Trigger: CGGACATGAAAGACCGAAGGATGCACCATGGGGCCACGGTGATGGGGAACAAGCTGTACGTGACAGGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CCCCAAGGAGGAGGAGGAAGTCTTGGTAGGAGCTCCTaGGGGGCATGCGCCATAGGAGTTTACAATCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PQGGGGSLGRSS*GACAIGVYNPG Trigger: CCCAGGATTGTAAACTCCTATGGCGCATGCCCCCAAGGAGCTCCTACCAAGACTTCCTCCTCCTCCTTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | GTGACAGCTGAGGCCTTGTACAACCGTATGGGAAGCTaGGCTAGGCTCTGCCACTGGCCAGTCTGTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: VTAEALYNRMGS*ARLCHWPVCPL Trigger: CAGTGGACAGACTGGCCAGTGGCAGAGCCTAGCCAAGCTTCCCATACGGTTGTACAAGGCCTCAGCTGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | TCCACCGGGCTTGAAGGTCATGCTTCACCCAAGCCATaGGGGCCTCGAACACCTTTTCCTCCTCACCACAGA | + |
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Preference number: 6 (lower is better) Translates to: STGLEGHASPKP*GPRTPFPPHHR Trigger: TCTGTGGTGAGGAGGAAAAGGTGTTCGAGGCCCTCATGGCTTGGGTGAAGCATGACCTTCAAGCCCGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | AGTGTCCGTCTCTGGGTCGTAGCAGTCAAAGGAAGCTaGGTCCTCGATGTTACAGTCTGTGGTCAGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: SVRLWVVAVKGS*VLDVTVCGQPP Trigger: CGGCGGCTGACCACAGACTGTAACATCGAGGACTCAGCTTCCTTTGACTGCTACGACCCAGAGACGGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 72 bp | TGCGGTGACAAGGGACCTCCCAGGCCCCGGAGCAGATaGTCACATCAGTCAGGATCTTGCTTTGTCTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: CGDKGPPRPRSR*SHQSGSCFVLS Trigger: GCTTAAGACAAAGCAAGATCCTGACTGATGTGAGCATCTGCTCCGGGGCCTGGGAGGTCCCTTGTCACCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | GTCACGTACAGCTTGTTCCCCATCACCGTGGCCCCATaGTGCATCCTTCGGTCTTTCATGTCCGCACACTTG | + |
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Preference number: 6 (lower is better) Translates to: VTYSLFPITVAP*CILRSFMSAHL Trigger: CAAGTGTGCGGACATGAAAGACCGAAGGATGCACCATGGGGCCACGGTGATGGGGAACAAGCTGTACGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CTTAAGATTTCTGCGAGTCTGACTAGGCCCAGGCAATaGCTGGGGGCCAGCTGGCTCTGGAGGTATGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LKISASLTRPRQ*LGASWLWRYEE Trigger: CTCCTCATACCTCCAGAGCCAGCTGGCCCCCAGCAATTGCCTGGGCCTAGTCAGACTCGCAGAAATCTTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | AAGCAGGCGAGGACTGGAGGAGGGCGTCATTGGCAATaGAGTGATGGAAGAAGGCTGGGTGGATGTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: KQARTGGGRHWQ*SDGRRLGGCTA Trigger: TGCAGTACATCCACCCAGCCTTCTTCCATCACTTCATTGCCAATGACGCCCTCCTCCAGTCCTCGCCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 72 bp | ACGTACAGCTTGTTCCCCATCACCGTGGCCCCATGGTaGATCCTTCGGTCTTTCATGTCCGCACACTTGACA | + |
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Preference number: 6 (lower is better) Translates to: TYSLFPITVAPW*ILRSFMSAHLT Trigger: TGTCAAGTGTGCGGACATGAAAGACCGAAGGATGCACCATGGGGCCACGGTGATGGGGAACAAGCTGTACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | GCAGCATGGCAGCAGCCTCCATCAGTGGGAGGACGTTaGCAGCTGAGATATGAACCTCTCCCGTATACACAT | + |
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Preference number: 6 (lower is better) Translates to: AAWQQPPSVGGR*QLRYEPLPYTH Trigger: ATGTGTATACGGGAGAGGTTCATATCTCAGCTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCCATGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CGGGCTGCCAGCATGGGCTCCCCCACCCTCCACTGGTaGAGTTTCAGAGAAAAGATATACACACCACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: RAASMGSPTLHW*SFREKIYTPQL Trigger: TAGCTGTGGTGTGTATATCTTTTCTCTGAAACTCAACCAGTGGAGGGTGGGGGAGCCCATGCTGGCAGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS GCA 72 bp | ATGCTGTCATACCTCTCCATGGAGGCCAGAAGCTCCTaGCCTTCTCCAGTACCCCCAATGGAGAAGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: MLSYLSMEARSS*PSPVPPMEKMK Trigger: CTTCATCTTCTCCATTGGGGGTACTGGAGAAGGGCAGGAGCTTCTGGCCTCCATGGAGAGGTATGACAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | AGTCAAAGGAAGCTGAGTCCTCGATGTTACAGTCTGTaGTCAGCCGCCGTCCACCTGTCACGTACAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQRKLSPRCYSL*SAAVHLSRTAC Trigger: ACAAGCTGTACGTGACAGGTGGACGGCGGCTGACCACAGACTGTAACATCGAGGACTCAGCTTCCTTTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CTGCATGATGTCCTCACCCCCAAAAAGATAGAGTCTTaGGTCCTTCACTGCTACGGCAGGGTGGAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: LHDVLTPKKIES*VLHCYGRVEHS Trigger: GCTGTGCTCCACCCTGCCGTAGCAGTGAAGGACCAAAGACTCTATCTTTTTGGGGGTGAGGACATCATGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 90 bp | GGGACCTCCCAGGCCCCGGAGCAGATGCTCACATCAGTCAGGATCTaGCTTTGTCTTAAGCCATTGAGCTGTCTTAACAAGTCAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GTSQAPEQMLTSVRI*LCLKPLSCLNKSEE Trigger: CTCCTCTGACTTGTTAAGACAGCTCAATGGCTTAAGACAAAGCAAGATCCTGACTGATGTGAGCATCTGCTCCGGGGCCTGGGAGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 90 bp | TACAGGGTTCTGCATGATGTCCTCACCCCCAAAAAGATAGAGTCTTaGGTCCTTCACTGCTACGGCAGGGTGGAGCACAGCCACTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: YRVLHDVLTPKKIES*VLHCYGRVEHSHWH Trigger: ATGCCAGTGGCTGTGCTCCACCCTGCCGTAGCAGTGAAGGACCAAAGACTCTATCTTTTTGGGGGTGAGGACATCATGCAGAACCCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | GCCTCCATCAGTGGGAGGACGTTGGCAGCTGAGATATaGACCTCTCCCGTATACACATACGTAATGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASISGRTLAAEI*TSPVYTYVMTC Trigger: GCAGGTCATTACGTATGTGTATACGGGAGAGGTTCATATCTCAGCTGCCAACGTCCTCCCACTGATGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | GGCAGCAGCCTCCATCAGTGGGAGGACGTTGGCAGCTaGGATATGAACCTCTCCCGTATACACATACGTAAT | + |
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Preference number: 6 (lower is better) Translates to: GSSLHQWEDVGS*DMNLSRIHIRN Trigger: ATTACGTATGTGTATACGGGAGAGGTTCATATCTCAGCTGCCAACGTCCTCCCACTGATGGAGGCTGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | GGGGCATGCGCCATAGGAGTTTACAATCCTGGGCACTaGGACCATACAAAGAGAAGATCTGTTTCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GACAIGVYNPGH*DHTKRRSVSWP Trigger: TGGCCAGGAAACAGATCTTCTCTTTGTATGGTCCCAGTGCCCAGGATTGTAAACTCCTATGGCGCATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CAGGCCCCGGAGCAGATGCTCACATCAGTCAGGATCTaGCTTTGTCTTAAGCCATTGAGCTGTCTTAACAAG | + |
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Preference number: 6 (lower is better) Translates to: QAPEQMLTSVRI*LCLKPLSCLNK Trigger: CTTGTTAAGACAGCTCAATGGCTTAAGACAAAGCAAGATCCTGACTGATGTGAGCATCTGCTCCGGGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CCA 72 bp | CCATTGAGCTGTCTTAACAAGTCAGAGGAGAAGCTGTaGTCTTTGAAGACAACCCCATCTGGTAACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PLSCLNKSEEKL*SLKTTPSGNSS Trigger: TGAGGAGTTACCAGATGGGGTTGTCTTCAAAGACCACAGCTTCTCCTCTGACTTGTTAAGACAGCTCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 90 bp | GAGCAGATGCTCACATCAGTCAGGATCTTGCTTTGTCTTAAGCCATaGAGCTGTCTTAACAAGTCAGAGGAGAAGCTGTGGTCTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: EQMLTSVRILLCLKP*SCLNKSEEKLWSLK Trigger: CTTCAAAGACCACAGCTTCTCCTCTGACTTGTTAAGACAGCTCAATGGCTTAAGACAAAGCAAGATCCTGACTGATGTGAGCATCTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | CATGGTGCATCCTTCGGTCTTTCATGTCCGCACACTTaGCAAATTTGTTGGACTGAGGATCGTAAGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: HGASFGLSCPHT*QICWTEDRKQE Trigger: TTCTTGCTTACGATCCTCAGTCCAACAAATTTGTCAAGTGTGCGGACATGAAAGACCGAAGGATGCACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS CAA 72 bp | CTCACATCAGTCAGGATCTTGCTTTGTCTTAAGCCATaGAGCTGTCTTAACAAGTCAGAGGAGAAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LTSVRILLCLKP*SCLNKSEEKLW Trigger: CCACAGCTTCTCCTCTGACTTGTTAAGACAGCTCAATGGCTTAAGACAAAGCAAGATCCTGACTGATGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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| CDS TCA 72 bp | TCACATCAGTCAGGATCTTGCTTTGTCTTAAGCCATTaGGCTGTCTTAACAAGTCAGAGGAGAAGCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SHQSGSCFVLSH*AVLTSQRRSCG Trigger: ACCACAGCTTCTCCTCTGACTTGTTAAGACAGCTCAATGGCTTAAGACAAAGCAAGATCCTGACTGATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022985.2 |
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