Pregenerated sensors for KLHL35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035298Ensembl transcript IDs: ENSMUST00000037359.9, ENSMUST00000152424.2, ENSMUST00000153736.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTGTCCCTGCAGGGCCACCATCTTGTGCCTCCACCTGCCCTTGTaGATTGAGGCAACCTTGATCCAGGTGTTCAGATGGGAGCTAAAC | + |
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Preference number: 1 (lower is better) Translates to: SCPCRATILCLHLPL*IEATLIQVFRWELN Trigger: GTTTAGCTCCCATCTGAACACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCAGGGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR TCA 90 bp | TCCCTGCAGGGCCACCATCTTGTGCCTCCACCTGCCCTTGTGCATTaGGGCAACCTTGATCCAGGTGTTCAGATGGGAGCTAAACATCCA | + |
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Preference number: 1 (lower is better) Translates to: SLQGHHLVPPPALVH*GNLDPGVQMGAKHP Trigger: TGGATGTTTAGCTCCCATCTGAACACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR GCA 90 bp | TCATTTGATCTTAGCCAGAAAGCTAAAGATATGCTTAGAAGATTGTaGTCAGGCCTGGAAGATTGTACACACGGGAACAGTGACACCATC | + |
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Preference number: 1 (lower is better) Translates to: SFDLSQKAKDMLRRL*SGLEDCTHGNSDTI Trigger: GATGGTGTCACTGTTCCCGTGTGTACAATCTTCCAGGCCTGAGCACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| 3UTR GCA 90 bp | ATATGGCATAGCCTTCATTTGATCTTAGCCAGAAAGCTAAAGATATaGTTAGAAGATTGTGCTCAGGCCTGGAAGATTGTACACACGGGA | + |
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Preference number: 1 (lower is better) Translates to: IWHSLHLILARKLKI*LEDCAQAWKIVHTG Trigger: TCCCGTGTGTACAATCTTCCAGGCCTGAGCACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGAAGGCTATGCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGTCTCAGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCAGGGCCACCTGCCCTTGTGCATTaGGGCAACCTTGATCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GVSGHRSHLLQRAVPAGPPALVH*GNLDPG Trigger: ACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGG...TGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCTGAGACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCGTCTCAGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCAGGGCCTCTTGTGCCTCCACCTaGCCTTGTGCATTGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RRLRPSKPPTAKSCPCRASCAST*PCALRQ Trigger: TTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGA...GGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCTGAGACGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR CAA 90 bp | TCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCAGGGCCACCATCTaGTGCCTCCACCTGCCCTTGTGCATTGAGGCAACCTTGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: SKPPTAKSCPCRATI*CLHLPLCIEATLIQ Trigger: CTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR CAA 90 bp | AAGAGCTGTCCCTGCAGGGCCACCATCTTGTGCCTCCACCTGCCCTaGTGCATTGAGGCAACCTTGATCCAGGTGTTCAGATGGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KSCPCRATILCLHLP*CIEATLIQVFRWEL Trigger: TAGCTCCCATCTGAACACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCAGGGACAGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCAGGGCCACCATCTTGTCTCCACCTGCCCTTGTaGATTGAGGCAACCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: GHRSHLLQRAVPAGPPSCLHLPL*IEATLI Trigger: GATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAG...ACAAGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTAGGTCTCATAGCACAGTTCAAAGAATAACCATCCTCTACATTGAATATATGCTTAGAAGATTGTaGTCAGGCCTGGAAGATTGT | + |
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Preference number: 2 (lower is better) Translates to: CLRSHSTVQRITILYIEYMLRRL*SGLEDC Trigger: ACAATCTTCCAGGCCTGAGCACAATCTTCTAAGCAT...ATATTCAATGTAGAGGATGGTTATTCTTTGAACTGTGCTATGAGACCTAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| 3UTR GCA 72 bp | GCTGCGCAGGCGTCTCAGGCCATCGAAGCCACCTACTaGAAAGAGCTGTCCCTGCAGGGCCACCATCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: AAQASQAIEATY*KELSLQGHHLV Trigger: CACAAGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCTGAGACGCCTGCGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR GCA 72 bp | AGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTaGAGGGCCACCATCTTGTGCCTCCACCTGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RPSKPPTAKSCP*RATILCLHLPL Trigger: CAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCAGGGCCACCATCTTGCCTCCACCTGCCCTaGTGCATTGAGGCAACCTTG | + |
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Preference number: 3 (lower is better) Translates to: SGHRSHLLQRAVPAGPPSCLHLP*CIEATL Trigger: CAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCA...AGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCGCAGGCGTCTCAGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCTGCATTGAGGCAACCTaGATCCAGGTGTTCAGATGG | + |
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Preference number: 3 (lower is better) Translates to: LRRRLRPSKPPTAKSCPCCIEAT*IQVFRW Trigger: CCATCTGAACACCTGGATCAAGGTTGCCTCAATGCA...GCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCTGAGACGCCTGCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR GCA 72 bp | ACTGCAAAGAGCTGTCCCTGCAGGGCCACCATCTTGTaGCTCCACCTGCCCTTGTGCATTGAGGCAACCTTG | + |
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Preference number: 3 (lower is better) Translates to: TAKSCPCRATIL*LHLPLCIEATL Trigger: CAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR TCA 72 bp | GGCCACCATCTTGTGCCTCCACCTGCCCTTGTGCATTaGGGCAACCTTGATCCAGGTGTTCAGATGGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: GHHLVPPPALVH*GNLDPGVQMGA Trigger: AGCTCCCATCTGAACACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR GCA 72 bp | GGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTaGCATGCCCAAATGTTCTCCTGGCTAAGACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: GLFTWRFQEGAK*HAQMFSWLRLP Trigger: GGGCAGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| 3UTR GCA 72 bp | TGCAGGGCCACCATCTTGTGCCTCCACCTGCCCTTGTaGATTGAGGCAACCTTGATCCAGGTGTTCAGATGG | + |
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Preference number: 3 (lower is better) Translates to: CRATILCLHLPL*IEATLIQVFRW Trigger: CCATCTGAACACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGATGGTGGCCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| 3UTR GCA 72 bp | GTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATaGCCAAATGTTCTCCTGGCTAAGACTGCCCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VHMEVPGGSQVP*PNVLLAKTAPS Trigger: AGAAGGGGCAGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| 3UTR GCA 72 bp | CTTAGCCAGAAAGCTAAAGATATGCTTAGAAGATTGTaGTCAGGCCTGGAAGATTGTACACACGGGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: LSQKAKDMLRRL*SGLEDCTHGNS Trigger: ACTGTTCCCGTGTGTACAATCTTCCAGGCCTGAGCACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| CDS-3UTR TCA 90 bp | CTGCGCAGGCGTCTCAGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCCTTCCCGGCCCAGGATaGAGCAGGCGCGGGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: LRRRLRPSKPPTAKSCPCLPGPG*SRRGLR Trigger: TCGAAGCCCGCGCCTGCTTCATCCTGGGCCGGGAAG...GCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCTGAGACGCCTGCGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| CDS-3UTR TCA 90 bp | CAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAAGACTGCCCCTTGCAGCACCACGTCGGTaGGGGTGCCGCTCCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QEGAKCHAQMFSWLRLPLAAPRR*GCRSGG Trigger: ACCGCCGGAGCGGCACCCTCACCGACGTGGTGCTGC...AAGGGGCAGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | AGGCCATCGAAGCCACCTACTGCAAAGAGCTGTCCCTGCAGGGCCACCATCTTGCAGTCGCCGCACGCCTaGAGCAGCTCGTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RPSKPPTAKSCPCRATILQSPHA*SSSSAS Trigger: GGAGGCGGACGAGCTGCTGCAGGCGTGCGGCGACTG...CAAGATGGTGGCCCTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGATGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
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| CDS-3UTR GCA 90 bp | CTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCCAGTCGCCGCACGCCTaGAGCAGCTCGTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFTWRFQEGAKCHAQMFSQSPHA*SSSSAS Trigger: GGAGGCGGACGAGCTGCTGCAGGCGTGCGGCGACTG...GGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | AAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGGCAGCGCCAGACTGTTaGCGGCGCGCAGGCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KGLFTWRFQEGAKCHAQMAAPDC*RRAGGP Trigger: AGGGCCGCCTGCGCGCCGCCAACAGTCTGGCGCTGC...CATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | CCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAAGACTGCCCCTCATAGCGCTCCACGCTaGGCAGGCGTCTCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGGSQVPCPNVLLAKTAPHSAPR*AGVSGH Trigger: ATGGCCTGAGACGCCTGCGCAGCGTGGAGCGCTATG...AGGGGCAGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | GTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAACCTCCACGAAGGCCTaGCGCAGCACGCGGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: VKGLFTWRFQEGAKCHAQTSTKA*RSTRPQ Trigger: CTGCGGCCGCGTGCTGCGCCAGGCCTTCGTGGAGGT...TTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAAGACTGCCCCTTCCGGCAGGGGCGCTATaGCTGCCCAGGTGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QEGAKCHAQMFSWLRLPLPAGAL*LPRCWR Trigger: TCTCCAACACCTGGGCAGCCATAGCGCCCCTGCCGG...AAGGGGCAGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | CTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCCGCTGCAGGGATGGCTaGGCCTCCACCTGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LFTWRFQEGAKCHAQMFSRCRDG*ASTCPV Trigger: CACTGGGCAGGTGGAGGCCCAGCCATCCCTGCAGCG...GGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | AGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTCTCAGCGCCGCGCGGTaGCACGGGAAGTCGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RGNKLKDCSHGGSRREPSLSAAR*HGKSRP Trigger: AGGCCGCGACTTCCCGTGCCACCGCGCGGCGCTGAG...ACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | ACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTACTGCAAGAAGGGTGCTaGGGACCGCAGGCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: TWRFQEGAKCHAQMFSWLLQEGC*GPQAPL Trigger: CAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAG...TAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | CTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCAGCTCTCCACAGGGCTaGGCAGGTCAGCTGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LFTWRFQEGAKCHAQMFSSSPQG*AGQLPL Trigger: GAGAGGCAGCTGACCTGCCCAGCCCTGTGGAGAGCT...GGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR TCA 90 bp | GTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAGCACCTTGTCAGTGTTaGCACCGTCCTGTCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: VKGLFTWRFQEGAKCHAQAPCQC*HRPVLR Trigger: GCGCAGGACAGGACGGTGTCAACACTGACAAGGTGC...TTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | AGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGAGCTGGTGCAGCGCTaGAGGGATGGCTGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGNKLKDCSHGGSRREPSELVQR*RDGWAS Trigger: GGAGGCCCAGCCATCCCTGCAGCGCTGCACCAGCTC...ACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | ACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTATGGCTGCCCAGGTGTTaGAGAACGGGTCATAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TWRFQEGAKCHAQMFSWLWLPRC*RTGHSA Trigger: AGCGCTATGACCCGTTCTCCAACACCTGGGCAGCCA...TAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | AAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCCACAGCCATGAGAGCTaGTGCAGCGCTGCAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: KLKDCSHGGSRREPSAMPHSHES*CSAAGM Trigger: CATCCCTGCAGCGCTGCACCAGCTCTCATGGCTGTG...GGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR TCA 90 bp | ACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAGGTCACACCCGCCAATaGCCACGATCACTTCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: TWRFQEGAKCHAQMFSWLGHTRQ*PRSLQL Trigger: TAGCTGAAGTGATCGTGGTCATTGGCGGGTGTGACC...TAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR TCA 90 bp | CTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCCCTGCCCTTGTGCATTaGGGCAACCTTGATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LFTWRFQEGAKCHAQMFSPALVH*GNLDPG Trigger: ACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGG...GGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR TCA 90 bp | CTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGCCAGGGTCAAAGGTaGAGACACTGCTGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LFTWRFQEGAKCHAQMFSCQGQR*RHCWCS Trigger: AGAGCACCAGCAGTGTCTTCACCTTTGACCCTGGCA...GGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | AATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCGCTGCAAGAAGGGTaGTGGGGACCGCAGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NKLKDCSHGGSRREPSAMPLQEG*WGPQAP Trigger: TGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCGG...CATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR TCA 90 bp | TGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGCTTCCCGGCCCAGGATaGAGCAGGCGCGGGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: CKKRGNKLKDCSHGGSRRLPGPG*SRRGLR Trigger: TCGAAGCCCGCGCCTGCTTCATCCTGGGCCGGGAAG...CCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | ACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAATCGAAGCCACCTACTaGAAAGAGCTGTCCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TWRFQEGAKCHAQMFSWLIEATY*KELSLQ Trigger: CTGCAGGGACAGCTCTTTGCAGTAGGTGGCTTCGAT...TAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | ACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTACCAGCGCTGACTTTCTaGGTGGTAAGCATCCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TWRFQEGAKCHAQMFSWLPALTF*VVSIRK Trigger: TTTGCGGATGCTTACCACCCAGAAAGTCAGCGCTGG...TAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | AAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTCCACTGGTCCTCCTTaGGGTCAAAGCACTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: KGLFTWRFQEGAKCHAQMSTGPP*GQSTAP Trigger: AGGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGA...CATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | AATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTGCCATGGCCTCAAGACACCGCTaGAAGAAGGGTGCTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NKLKDCSHGGSRREPSAMASRHR*KKGAGD Trigger: GTCCCCAGCACCCTTCTTGCAGCGGTGTCTTGAGGC...CATGGCACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGTCCAGGAAGTCGGCGTaGCGCGTCACCTCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKRGNKLKDCSHGGSRRESRKSA*RVTSTK Trigger: CTTCGTGGAGGTGACGCGCCACGCCGACTTCCTGGA...CTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| 3UTR CAA 72 bp | TTGTGCCTCCACCTGCCCTTGTGCATTGAGGCAACCTaGATCCAGGTGTTCAGATGGGAGCTAAACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLHLPLCIEAT*IQVFRWELNIQ Trigger: CTGGATGTTTAGCTCCCATCTGAACACCTGGATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153736.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGGACCGCAGGCTCCACTaGTCCTCCTTGGGGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKRGNKLKDCSHGGSRREDRRLH*SSLGSK Trigger: CTTTGACCCCAAGGAGGACCAGTGGAGCCTGCGGTC...CTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR GCA 90 bp | TTTTATTTCTGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTAGCGGCAGGCGCACGTaGTCCAGGAGGCGACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYFCKKRGNKLKDCSHGGSGRRT*SRRRRS Trigger: GCTGCGTCGCCTCCTGGAGCACGTGCGCCTGCCGCT...ACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACAGAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCATCTTGTGCCTCCACCTaGCCTTGTGCATTGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRGNKLKDCSHGGSRREPSCAST*PCALRQ Trigger: TTGCCTCAATGCACAAGGGCAGGTGGAGGCACAAGA...TGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR GCA 90 bp | CGAGACAAGTCACATGCTTTATGTCTTAGGTCTCATAGCACAGTTCAAAGAATACCGCTGCAAGAAGGGTaGTGGGGACCGCAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDKSHALCLRSHSTVQRIPLQEG*WGPQAP Trigger: TGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCGG...TATTCTTTGAACTGTGCTATGAGACCTAAGACATAAAGCATGTGACTTGTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTCTGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTGCAGCGCTGCAGGGATaGCTGGGCCTCCACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FYFCKKRGNKLKDCSHGGAALQG*LGLHLP Trigger: GGGCAGGTGGAGGCCCAGCCATCCCTGCAGCGCTGC...ACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACAGAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGTTCCAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAAGAAATGTCATTTCGAAGTaGACAGGAGGCAAATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRFQEGAKCHAQMFSWLRNVISK*TGGKFR Trigger: TCTGAATTTGCCTCCTGTGCACTTCGAAATGACATT...TCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTGGAACCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR CCA 90 bp | TCTCATAGCACAGTTCAAAGAATAACCATCCTCTACATTGAATATGGCATAGCCGGGAGCAAGGGGCTGTaGGAGTCAGAACTTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSTVQRITILYIEYGIAGSKGL*ESELAP Trigger: AGGCGCAAGTTCTGACTCCCACAGCCCCTTGCTCCC...GGCTATGCCATATTCAATGTAGAGGATGGTTATTCTTTGAACTGTGCTATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCACATGCTTTATGTCTTAGGTCTCATAGCACAGTTCAAAGAATAACCATCGCACCTTGTCAGTGTTaGCACCGTCCTGTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSHALCLRSHSTVQRITIAPCQC*HRPVLR Trigger: GCGCAGGACAGGACGGTGTCAACACTGACAAGGTGC...GATGGTTATTCTTTGAACTGTGCTATGAGACCTAAGACATAAAGCATGTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR GCA 90 bp | TATTTCTGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCCATCGGCTCAGGCTCTaGACGATGGTGACACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFCKKRGNKLKDCSHGGSHRLRL*TMVTQP Trigger: TGGCTGTGTCACCATCGTGCAGAGCCTGAGCCGATG...GGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACAGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR CCA 90 bp | ATATGGCATAGCCTTCATTTGATCTTAGCCAGAAAGCTAAAGATATGCTTAGAACTGCAAGAAGGGTGCTaGGGACCGCAGGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IWHSLHLILARKLKICLELQEGC*GPQAPL Trigger: CAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAG...TTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGAAGGCTATGCCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR GCA 90 bp | CATAGCCTTCATTTGATCTTAGCCAGAAAGCTAAAGATATGCTTAGAAGATTGTGCCTCAAGACACCGCTaGAAGAAGGGTGCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLILARKLKICLEDCASRHR*KKGAGD Trigger: GTCCCCAGCACCCTTCTTGCAGCGGTGTCTTGAGGC...ACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGAAGGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTCTGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTAGCCATGAGAGCTGGTaGAGCGCTGCAGGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FYFCKKRGNKLKDCSHGGSHESW*SAAGMA Trigger: AGCCATCCCTGCAGCGCTGCACCAGCTCTCATGGCT...ACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACAGAAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGGTCTCATAGCACAGTTCAAAGAATAACCATCCTCTACATTGAATATGACCGCAGGCTCCACTaGTCCTCCTTGGGGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLRSHSTVQRITILYIEYDRRLH*SSLGSK Trigger: CTTTGACCCCAAGGAGGACCAGTGGAGCCTGCGGTC...ATATTCAATGTAGAGGATGGTTATTCTTTGAACTGTGCTATGAGACCTAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTAGGTCTCATAGCACAGTTCAAAGAATAACCATCCTCTACATTGAATATTTGATACCACAGGGCTaGGCAGGTCAGCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLRSHSTVQRITILYIEYLIPQG*AGQLPL Trigger: GAGAGGCAGCTGACCTGCCCAGCCCTGTGGTATCAA...ATATTCAATGTAGAGGATGGTTATTCTTTGAACTGTGCTATGAGACCTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| 3UTR CAA 72 bp | GATCTTAGCCAGAAAGCTAAAGATATGCTTAGAAGATaGTGCTCAGGCCTGGAAGATTGTACACACGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSQKAKDMLRR*CSGLEDCTHGN Trigger: GTTCCCGTGTGTACAATCTTCCAGGCCTGAGCACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTCTTAGGTCTCATAGCACAGTTCAAAGAATAACCATCCTCTACATTGAATCCACTGGTCCTCCTTaGGGTCAAAGCACTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRSHSTVQRITILYIESTGPP*GQSTAP Trigger: AGGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGA...TTCAATGTAGAGGATGGTTATTCTTTGAACTGTGCTATGAGACCTAAGACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR TCA 90 bp | ATATGGCATAGCCTTCATTTGATCTTAGCCAGAAAGCTAAAGATATGCTTAGAACCATTCTTTGCTAGTTaGTACCACAGGGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWHSLHLILARKLKICLEPFFAS*YHRAGQ Trigger: CTGCCCAGCCCTGTGGTATCAACTAGCAAAGAATGG...TTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGAAGGCTATGCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTCTGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTCTCCACCTGCCCTTGTaGATTGAGGCAACCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FYFCKKRGNKLKDCSHGGLHLPL*IEATLI Trigger: GATCAAGGTTGCCTCAATGCACAAGGGCAGGTGGAG...ACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACAGAAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCACATGCTTTATGTCTTAGGTCTCATAGCACAGTTCAAAGAATAACCATCGTTTCTTTGGAGTTTTaGGGTGACAGGTGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSHALCLRSHSTVQRITIVSLEF*GDRWVQ Trigger: CTGCACCCACCTGTCACCCCAAAACTCCAAAGAAAC...GATGGTTATTCTTTGAACTGTGCTATGAGACCTAAGACATAAAGCATGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR CCA 90 bp | CGAGACAAGTCACATGCTTTATGTCTTAGGTCTCATAGCACAGTTCAAAGAATACATCCAGGACCCAAATaGACAGGAACCACCAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: RDKSHALCLRSHSTVQRIHPGPK*TGTTNY Trigger: ATAATTGGTGGTTCCTGTCCATTTGGGTCCTGGATG...TATTCTTTGAACTGTGCTATGAGACCTAAGACATAAAGCATGTGACTTGTCTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS CCA 90 bp | CCCCGGCGTCTCGGGTCCTACCGGGACCACCGCCGCCGCGCGCTCTaGACGACCGGCCGCGAACAGGCCGCGGAAGTGGGCGCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRLGSYRDHRRRAL*TTGREQAAEVGAGR Trigger: GCGGCCAGCGCCCACTTCCGCGGCCTGTTCGCGGCCGGTCGTCCAGAGCGCGCGGCGGCGGTGGTCCCGGTAGGACCCGAGACGCCGGGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | AGGCGAGCGAGAAGGCGGCGGCGACGCGTCGCAGCGCCAGACTGTTaGCGGCGCGCAGGCGGCCCTCGAGGAAGCGCGCGCAGGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRARRRRRRVAAPDC*RRAGGPRGSARRPP Trigger: GGGAGGCCTGCGCGCGCTTCCTCGAGGGCCGCCTGCGCGCCGCCAACAGTCTGGCGCTGCGACGCGTCGCCGCCGCCTTCTCGCTCGCCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS GCA 90 bp | AGGGTGCCGCTCCGGCGGTACGCGTTGAGCGTCTGCAGGATGCGCTaGGCGTGGCAGGACGCGGCGCACGGGGCCTCTGTGCCCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVPLRRYALSVCRMR*AWQDAAHGASVPGS Trigger: GGAGCCGGGCACAGAGGCCCCGTGCGCCGCGTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCGCCGGAGCGGCACCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | CCGCTCCGGCGGTACGCGTTGAGCGTCTGCAGGATGCGCTGCGCGTaGCAGGACGCGGCGCACGGGGCCTCTGTGCCCGGCTCCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PLRRYALSVCRMRCA*QDAAHGASVPGSSS Trigger: CGAGGAGGAGCCGGGCACAGAGGCCCCGTGCGCCGCGTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCGCCGGAGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | GCGAGCTCCAGGAAGTCGGCGTGGCGCGTCACCTCCACGAAGGCCTaGCGCAGCACGCGGCCGCAGCGCTCGGCCAGGGAGGCGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSRKSAWRVTSTKA*RSTRPQRSAREASE Trigger: CTCGCTCGCCTCCCTGGCCGAGCGCTGCGGCCGCGTGCTGCGCCAGGCCTTCGTGGAGGTGACGCGCCACGCCGACTTCCTGGAGCTCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | AGCAGCGCCGCCACCTCGTCGGGCGCGAGCTCCAGGAAGTCGGCGTaGCGCGTCACCTCCACGAAGGCCTGGCGCAGCACGCGGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSAATSSGASSRKSA*RVTSTKAWRSTRPQ Trigger: CTGCGGCCGCGTGCTGCGCCAGGCCTTCGTGGAGGTGACGCGCCACGCCGACTTCCTGGAGCTCGCGCCCGACGAGGTGGCGGCGCTGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS GCA 90 bp | ACCACGTCGGTGAGGGTGCCGCTCCGGCGGTACGCGTTGAGCGTCTaGAGGATGCGCTGCGCGTGGCAGGACGCGGCGCACGGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TTSVRVPLRRYALSV*RMRCAWQDAAHGAS Trigger: AGAGGCCCCGTGCGCCGCGTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCGCCGGAGCGGCACCCTCACCGACGTGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | TCAGTGTTGACACCGTCCTGTCCTGCGCCCCCAATCACGTATAGCTaGCCAGCGCAGGGCGCCACGGCTGCAGAGCTCACGGCCTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLTPSCPAPPITYS*PAQGATAAELTASG Trigger: GCCGGAGGCCGTGAGCTCTGCAGCCGTGGCGCCCTGCGCTGGCCAGCTATACGTGATTGGGGGCGCAGGACAGGACGGTGTCAACACTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS TCA 90 bp | GCAGGGATGGCTGGGCCTCCACCTGCCCAGTGCCAGGGTCAAAGGTaGAGACACTGCTGGTGCTCTCCCCGTGTTCGTCCCGCCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGMAGPPPAQCQGQR*RHCWCSPRVRPAHQ Trigger: TTGGTGGGCGGGACGAACACGGGGAGAGCACCAGCAGTGTCTTCACCTTTGACCCTGGCACTGGGCAGGTGGAGGCCCAGCCATCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | CACGATGGTGACACAGCCATGAGAGCTGGTGCAGCGCTGCAGGGATaGCTGGGCCTCCACCTGCCCAGTGCCAGGGTCAAAGGTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HDGDTAMRAGAALQG*LGLHLPSARVKGED Trigger: GTCTTCACCTTTGACCCTGGCACTGGGCAGGTGGAGGCCCAGCCATCCCTGCAGCGCTGCACCAGCTCTCATGGCTGTGTCACCATCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 90 bp | GTCTTCCAGGGAGACAGCCTCAAGACACCGCTGCAAGAAGGGTGCTaGGGACCGCAGGCTCCACTGGTCCTCCTTGGGGTCAAAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VFQGDSLKTPLQEGC*GPQAPLVLLGVKAL Trigger: CAGTGCTTTGACCCCAAGGAGGACCAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCGGTGTCTTGAGGCTGTCTCCCTGGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS CCA 90 bp | TCAAGACACCGCTGCAAGAAGGGTGCTGGGGACCGCAGGCTCCACTaGTCCTCCTTGGGGTCAAAGCACTGCACCTTGTCAGTGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRHRCKKGAGDRRLH*SSLGSKHCTLSVLT Trigger: TGTCAACACTGACAAGGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCGGTGTCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGGGAGCCAAGTGCCATGCCCAAATGTTCTCCTGGCTAAGACTGCCCCTTCTCCACTGGTCCTCCTaGGGGTCAAAGCACTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QEGAKCHAQMFSWLRLPLLHWSS*GSKHCT Trigger: GGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGAG...AAGGGGCAGTCTTAGCCAGGAGAACATTTGGGCATGGCACTTGGCTCCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CAA 90 bp | TGTAAGAAGAGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGTGCCTCCACCTGCCCTaGTGCATTGAGGCAACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CKKRGNKLKDCSHGGSRRCLHLP*CIEATL Trigger: CAAGGTTGCCTCAATGCACAAGGGCAGGTGGAGGCA...CCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCTCTTCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS-3UTR CAA 90 bp | AGGGGAAATAAGTTAAAGGACTGTTCACATGGAGGTTCCAGGAGGGAGCCAAGTTGCATTGAGGCAACCTaGATCCAGGTGTTCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RGNKLKDCSHGGSRREPSCIEAT*IQVFRW Trigger: CCATCTGAACACCTGGATCAAGGTTGCCTCAATGCA...ACTTGGCTCCCTCCTGGAACCTCCATGTGAACAGTCCTTTAACTTATTTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS TCA 90 bp | TTGAGTCATCCAGGACCCAAATGGACAGGAACCACCAATTATACCTaGTACATAGTTTCTTTGGAGTTTTGGGGTGACAGGTGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSHPGPKWTGTTNYT*YIVSLEFWGDRWVQ Trigger: CTGCACCCACCTGTCACCCCAAAACTCCAAAGAAACTATGTATCAGGTATAATTGGTGGTTCCTGTCCATTTGGGTCCTGGATGACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR CAA 90 bp | CATAGCCTTCATTTGATCTTAGCCAGAAAGCTAAAGATATGCTTAGAAGATTGTCTCCACTGGTCCTCCTaGGGGTCAAAGCACTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HSLHLILARKLKICLEDCLHWSS*GSKHCT Trigger: GGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGAG...ACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGAAGGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS-3UTR CAA 90 bp | CATAGCCTTCATTTGATCTTAGCCAGAAAGCTAAAGATATGCTTAGAAGATTGTTCTCTTGTCCATTCTTaGCTAGTTGATACCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLHLILARKLKICLEDCSLVHS*LVDTTG Trigger: CCCTGTGGTATCAACTAGCAAAGAATGGACAAGAGA...ACAATCTTCTAAGCATATCTTTAGCTTTCTGGCTAAGATCAAATGAAGGCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
||
| CDS GCA 72 bp | AGCGGCAGGCGCACGTGCTCCAGGAGGCGACGCAGCTaGCCGCGGCGAGCCGGCGCGTCGTGGCGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGRRTCSRRRRS*PRRAGASWRTQ Trigger: CTGGGTGCGCCACGACGCGCCGGCTCGCCGCGGGCAGCTGCGTCGCCTCCTGGAGCACGTGCGCCTGCCGCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS CAA 90 bp | GAGGCGAGCGAGAAGGCGGCGGCGACGCGTCGCAGCGCCAGACTGTaGGCGGCGCGCAGGCGGCCCTCGAGGAAGCGCGCGCAGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EASEKAAATRRSARL*AARRRPSRKRAQAS Trigger: GGAGGCCTGCGCGCGCTTCCTCGAGGGCCGCCTGCGCGCCGCCAACAGTCTGGCGCTGCGACGCGTCGCCGCCGCCTTCTCGCTCGCCTC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS TCA 72 bp | GCCTGGCCCGCAGCGCGCCCGCTTCCCGGCCCAGGATaGAGCAGGCGCGGGCTTCGAGCAGCAGAGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AWPAARPLPGPG*SRRGLRAAEGG Trigger: GCCGCCCTCTGCTGCTCGAAGCCCGCGCCTGCTTCATCCTGGGCCGGGAAGCGGGCGCGCTGCGGGCCAGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000153736.2 |
||
| CDS CCA 72 bp | GACGACCGGCCGCGAACAGGCCGCGGAAGTGGGCGCTaGCCGCGCTCAGCGCCGCGCGGTGGCACGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DDRPRTGRGSGR*PRSAPRGGTGS Trigger: ACTTCCCGTGCCACCGCGCGGCGCTGAGCGCGGCCAGCGCCCACTTCCGCGGCCTGTTCGCGGCCGGTCGTC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS CCA 72 bp | CTCGGGTCCTACCGGGACCACCGCCGCCGCGCGCTCTaGACGACCGGCCGCGAACAGGCCGCGGAAGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSYRDHRRRAL*TTGREQAAEVG Trigger: GCCCACTTCCGCGGCCTGTTCGCGGCCGGTCGTCCAGAGCGCGCGGCGGCGGTGGTCCCGGTAGGACCCGAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS CCA 72 bp | AGAAGGCGGCGGCGACGCGTCGCAGCGCCAGACTGTTaGCGGCGCGCAGGCGGCCCTCGAGGAAGCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRRRVAAPDC*RRAGGPRGSAR Trigger: GCGCGCGCTTCCTCGAGGGCCGCCTGCGCGCCGCCAACAGTCTGGCGCTGCGACGCGTCGCCGCCGCCTTCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
||
| CDS CCA 72 bp | CGGTACGCGTTGAGCGTCTGCAGGATGCGCTGCGCGTaGCAGGACGCGGCGCACGGGGCCTCTGTGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RYALSVCRMRCA*QDAAHGASVPG Trigger: GCCGGGCACAGAGGCCCCGTGCGCCGCGTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 72 bp | AGGAAGTCGGCGTGGCGCGTCACCTCCACGAAGGCCTaGCGCAGCACGCGGCCGCAGCGCTCGGCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RKSAWRVTSTKA*RSTRPQRSARE Trigger: CTCCCTGGCCGAGCGCTGCGGCCGCGTGCTGCGCCAGGCCTTCGTGGAGGTGACGCGCCACGCCGACTTCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CAA 90 bp | GCGCGCAGCACCACGTCGGTGAGGGTGCCGCTCCGGCGGTACGCGTaGAGCGTCTGCAGGATGCGCTGCGCGTGGCAGGACGCGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: ARSTTSVRVPLRRYA*SVCRMRCAWQDAAH Trigger: GTGCGCCGCGTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCGCCGGAGCGGCACCCTCACCGACGTGGTGCTGCGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS GCA 72 bp | GTGAGGGTGCCGCTCCGGCGGTACGCGTTGAGCGTCTaGAGGATGCGCTGCGCGTGGCAGGACGCGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: VRVPLRRYALSV*RMRCAWQDAAH Trigger: GTGCGCCGCGTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCGCCGGAGCGGCACCCTCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 72 bp | GCCACCTCGTCGGGCGCGAGCTCCAGGAAGTCGGCGTaGCGCGTCACCTCCACGAAGGCCTGGCGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: ATSSGASSRKSA*RVTSTKAWRST Trigger: CGTGCTGCGCCAGGCCTTCGTGGAGGTGACGCGCCACGCCGACTTCCTGGAGCTCGCGCCCGACGAGGTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CAA 72 bp | ACCACGTCGGTGAGGGTGCCGCTCCGGCGGTACGCGTaGAGCGTCTGCAGGATGCGCTGCGCGTGGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TTSVRVPLRRYA*SVCRMRCAWQD Trigger: GTCCTGCCACGCGCAGCGCATCCTGCAGACGCTCAACGCGTACCGCCGGAGCGGCACCCTCACCGACGTGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS GCA 72 bp | GCTTCGAGCAGCAGAGGGCGGCAGTCGCCGCACGCCTaGAGCAGCTCGTCCGCCTCCACCTTCTCCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASSSRGRQSPHA*SSSSASTFSRK Trigger: CTTCCTGGAGAAGGTGGAGGCGGACGAGCTGCTGCAGGCGTGCGGCGACTGCCGCCCTCTGCTGCTCGAAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000153736.2 |
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| CDS CCA 72 bp | CGGCTGCAGAGCTCACGGCCTCCGGCAGGGGCGCTATaGCTGCCCAGGTGTTGGAGAACGGGTCATAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RLQSSRPPAGAL*LPRCWRTGHSA Trigger: AGCGCTATGACCCGTTCTCCAACACCTGGGCAGCCATAGCGCCCCTGCCGGAGGCCGTGAGCTCTGCAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CCA 72 bp | ACACCGTCCTGTCCTGCGCCCCCAATCACGTATAGCTaGCCAGCGCAGGGCGCCACGGCTGCAGAGCTCACG | + |
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Preference number: 6 (lower is better) Translates to: TPSCPAPPITYS*PAQGATAAELT Trigger: CGTGAGCTCTGCAGCCGTGGCGCCCTGCGCTGGCCAGCTATACGTGATTGGGGGCGCAGGACAGGACGGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS GCA 72 bp | TGCAGAGCTCACGGCCTCCGGCAGGGGCGCTATGGCTaGCCAGGTGTTGGAGAACGGGTCATAGCGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: CRAHGLRQGRYG*PGVGERVIALH Trigger: GTGGAGCGCTATGACCCGTTCTCCAACACCTGGGCAGCCATAGCGCCCCTGCCGGAGGCCGTGAGCTCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS TCA 72 bp | CATCGGCTCAGGCTCTGCACGATGGTGACACAGCCATaGGAGCTGGTGCAGCGCTGCAGGGATGGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HRLRLCTMVTQP*ELVQRCRDGWA Trigger: GGCCCAGCCATCCCTGCAGCGCTGCACCAGCTCTCATGGCTGTGTCACCATCGTGCAGAGCCTGAGCCGATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS GCA 72 bp | CAGGGAGACAGCCTCAAGACACCGCTGCAAGAAGGGTaGTGGGGACCGCAGGCTCCACTGGTCCTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: QGDSLKTPLQEG*WGPQAPLVLLG Trigger: CCCAAGGAGGACCAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCGGTGTCTTGAGGCTGTCTCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS CCA 72 bp | GGAGACAGCCTCAAGACACCGCTGCAAGAAGGGTGCTaGGGACCGCAGGCTCCACTGGTCCTCCTTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GDSLKTPLQEGC*GPQAPLVLLGV Trigger: GACCCCAAGGAGGACCAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCGGTGTCTTGAGGCTGTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS CAA 90 bp | CGCTGCAAGAAGGGTGCTGGGGACCGCAGGCTCCACTGGTCCTCCTaGGGGTCAAAGCACTGCACCTTGTCAGTGTTGACACCGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RCKKGAGDRRLHWSS*GSKHCTLSVLTPSC Trigger: ACAGGACGGTGTCAACACTGACAAGGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGAGCCTGCGGTCCCCAGCACCCTTCTTGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS CAA 72 bp | CTCCACTGGTCCTCCTTGGGGTCAAAGCACTGCACCTaGTCAGTGTTGACACCGTCCTGTCCTGCGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LHWSSLGSKHCT*SVLTPSCPAPP Trigger: TGGGGGCGCAGGACAGGACGGTGTCAACACTGACAAGGTGCAGTGCTTTGACCCCAAGGAGGACCAGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS CCA 72 bp | AGGCAGGCTAGGCAGTGGGGTCCAGCGCTGACTTTCTaGGTGGTAAGCATCCGCAAAAGGCAGCTTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RQARQWGPALTF*VVSIRKRQLQE Trigger: CTCCTGAAGCTGCCTTTTGCGGATGCTTACCACCCAGAAAGTCAGCGCTGGACCCCACTGCCTAGCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS TCA 72 bp | AGGGCTGGGCAGGTCAGCTGCCTCTCTCCAGACATCTaGGCCAGGGTCATAGGTGAAAATTTTGCTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: RAGQVSCLSPDI*ARVIGENFAHE Trigger: CTCATGAGCAAAATTTTCACCTATGACCCTGGCTCAGATGTCTGGAGAGAGGCAGCTGACCTGCCCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037359.9 ENSMUST00000152424.2 |
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| CDS CCA 72 bp | AAATTCAGAGCGTGTATAACCAGGCAGGCTAGGCAGTaGGGTCCAGCGCTGACTTTCTGGGTGGTAAGCATC | + |
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Preference number: 6 (lower is better) Translates to: KFRACITRQARQ*GPALTFWVVSI Trigger: GATGCTTACCACCCAGAAAGTCAGCGCTGGACCCCACTGCCTAGCCTGCCTGGTTATACACGCTCTGAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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| CDS CAA 90 bp | GCCACTGGAATAGGGAACTTAGCAGGTAGGTCTCTTGTCCATTCTTaGCTAGTTGATACCACAGGGCTGGGCAGGTCAGCTGCCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ATGIGNLAGRSLVHS*LVDTTGLGRSAASL Trigger: GAGAGAGGCAGCTGACCTGCCCAGCCCTGTGGTATCAACTAGCAAAGAATGGACAAGAGACCTACCTGCTAAGTTCCCTATTCCAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| CDS CAA 72 bp | ATAGGGAACTTAGCAGGTAGGTCTCTTGTCCATTCTTaGCTAGTTGATACCACAGGGCTGGGCAGGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: IGNLAGRSLVHS*LVDTTGLGRSA Trigger: AGCTGACCTGCCCAGCCCTGTGGTATCAACTAGCAAAGAATGGACAAGAGACCTACCTGCTAAGTTCCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| CDS TCA 72 bp | CCAGGACCCAAATGGACAGGAACCACCAATTATACCTaGTACATAGTTTCTTTGGAGTTTTGGGGTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: PGPKWTGTTNYT*YIVSLEFWGDR Trigger: CCTGTCACCCCAAAACTCCAAAGAAACTATGTATCAGGTATAATTGGTGGTTCCTGTCCATTTGGGTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152424.2 |
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| CDS GCA 72 bp | GATGTGACCTCCAGAAACGTAAATGTCATTTCGAAGTaGACAGGAGGCAAATTCAGAGCGTGTATAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: DVTSRNVNVISK*TGGKFRACITR Trigger: CCTGGTTATACACGCTCTGAATTTGCCTCCTGTGCACTTCGAAATGACATTTACGTTTCTGGAGGTCACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037359.9 |
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