Pregenerated sensors for KLHL34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047485Ensembl transcript IDs: ENSMUST00000087157.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCAGCTGCCATCCAGCGGTCCCTGCGAAGGTCATACATCTCCACTaGGGCCAGTGCCTCACCACAGATGCCCAGGCCTCCGACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SSCHPAVPAKVIHLH*GQCLTTDAQASDSQ Trigger: CTGGCTGTCGGAGGCCTGGGCATCTGTGGTGAGGCACTGGCCTCAGTGGAGATGTATGACCTTCGCAGGGACCGCTGGATGGCAGCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | AGTCGCTGGAGCACGCCAGAAGTGACCTGTGTGCTGGGAACTCACTaGCCTCGGCCTCCAGTGTCACGTCGCACAAGAAGCCCTCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: SRWSTPEVTCVLGTH*PRPPVSRRTRSPQR Trigger: GCGCTGAGGGCTTCTTGTGCGACGTGACACTGGAGGCCGAGGGCAGTGAGTTCCCAGCACACAGGTCACTTCTGGCGTGCTCCAGCGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | GGATGCATCCAAGCAGTGTTGAACTATGTGCCAGGCGCTGGACCTTaGGTTCCTGCTGCAGCCAGGCTAGTGCCAGGCCCAGCAGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: GCIQAVLNYVPGAGP*VPAAARLVPGPAAA Trigger: CGCGGCTGCTGGGCCTGGCACTAGCCTGGCTGCAGCAGGAACCCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | AGCCCACTACGTTCCGGGTTGGCACCTGGCGTGAGTCCCGCCACTTaGGACCACCCAGCAGCAGCACTGTCTCTTCCACCACAGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SPLRSGLAPGVSPAT*DHPAAALSLPPQQV Trigger: GACTTGCTGTGGTGGAAGAGACAGTGCTGCTGCTGGGTGGTCTCAAGTGGCGGGACTCACGCCAGGTGCCAACCCGGAACGTAGTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | CAGGTCCAGGTCATAGCCCACTACGTTCCGGGTTGGCACCTGGCGTaGGTCCCGCCACTTGAGACCACCCAGCAGCAGCACTGTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: QVQVIAHYVPGWHLA*VPPLETTQQQHCLF Trigger: GAAGAGACAGTGCTGCTGCTGGGTGGTCTCAAGTGGCGGGACTCACGCCAGGTGCCAACCCGGAACGTAGTGGGCTATGACCTGGACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | CCAAAGCGGATGCATCCAAGCAGTGTTGAACTATGTGCCAGGCGCTaGACCTTGGGTTCCTGCTGCAGCCAGGCTAGTGCCAGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PKRMHPSSVELCARR*TLGSCCSQASARPS Trigger: GCTGGGCCTGGCACTAGCCTGGCTGCAGCAGGAACCCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCCGCTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | ACTCTTGAACAGGGCCCTGAAGTAGTCGCTGGAGCACGCCAGAAGTaGCCTGTGTGCTGGGAACTCACTGCCCTCGGCCTCCAGTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: TLEQGPEVVAGARQK*PVCWELTALGLQCH Trigger: GTGACACTGGAGGCCGAGGGCAGTGAGTTCCCAGCACACAGGTCACTTCTGGCGTGCTCCAGCGACTACTTCAGGGCCCTGTTCAAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | CACACCAGCAGGCACCAGGCCAAAGCGGATGCATCCAAGCAGTGTTaGACTATGTGCCAGGCGCTGGACCTTGGGTTCCTGCTGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: HTSRHQAKADASKQC*TMCQALDLGFLLQP Trigger: TGGCTGCAGCAGGAACCCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCCGCTTTGGCCTGGTGCCTGCTGGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | TCCCTTGTCTCCTCCCTACCCTCGGGTAGCTGCAGCACTGCACACTaGAGGCCACTCCATGCCCAGGGCAGCACACAGCCTATATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLVSSLPSGSCSTAH*RPLHAQGSTQPISS Trigger: GGAAGATATAGGCTGTGTGCTGCCCTGGGCATGGAGTGGCCTTCAGTGTGCAGTGCTGCAGCTACCCGAGGGTAGGGAGGAGACAAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | AGCCAGGAGACTCTCACCTACCACACCACACCAGAAGTAGGCCCTTaGTTCTCGCATGGCAGGCACCTGTGTCCAAGTGTGGAAGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SQETLTYHTTPEVGP*FSHGRHLCPSVEAR Trigger: CCGCGCTTCCACACTTGGACACAGGTGCCTGCCATGCGAGAAGCAAGGGCCTACTTCTGGTGTGGTGTGGTAGGTGAGAGTCTCCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | TCGCAGCACCACAAGGTAGTGCCCATAGCGAGCTGTGCCCATGGGTaGCCTCTTGCTCCACACTCTCTCTCCGGGGCTAAGGGAGTACAT | + |
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Preference number: 5 (lower is better) Translates to: SQHHKVVPIASCAHG*PLAPHSLSGAKGVH Trigger: ATGTACTCCCTTAGCCCCGGAGAGAGAGTGTGGAGCAAGAGGGCACCCATGGGCACAGCTCGCTATGGGCACTACCTTGTGGTGCTGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | AGTATATGCGCCGCAGCACACCAGCAGGCACCAGGCCAAAGCGGATaGATCCAAGCAGTGTTGAACTATGTGCCAGGCGCTGGACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SICAAAHQQAPGQSG*IQAVLNYVPGAGPW Trigger: CCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCCGCTTTGGCCTGGTGCCTGCTGGTGTGCTGCGGCGCATATACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | ACATATCCCGGAGGCTACTTGTGCCTCCTTCACCTCTCCCAGCCTTaGCCCCGGAGATGTACACAACACCATGATCCCCGACAGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: TYPGGYLCLLHLSQP*PRRCTQHHDPRQHL Trigger: CAGGTGCTGTCGGGGATCATGGTGTTGTGTACATCTCCGGGGGCAAGGCTGGGAGAGGTGAAGGAGGCACAAGTAGCCTCCGGGATATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | TGGCCTAGCAGTGGTGTGGGCAGCTGTGTCAAGCTGTGCCAGCTGTaGTTATACACGTCGAAGGACACCACATCCTGGGTGAGCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: WPSSGVGSCVKLCQL*LYTSKDTTSWVSSH Trigger: GTGGGAGCTCACCCAGGATGTGGTGTCCTTCGACGTGTATAACCACAGCTGGCACAGCTTGACACAGCTGCCCACACCACTGCTAGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | CACCTAGGGTGCGGGCCAGGCCAAATCGAGCTGCCACATTGGCAATaGAACAGCAATTCTCTGGGGCAAGCTGGCGTTCCAAGTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: HLGCGPGQIELPHWQ*NSNSLGQAGVPSSG Trigger: CCCACTACTTGGAACGCCAGCTTGCCCCAGAGAATTGCTGTTTCATTGCCAATGTGGCAGCTCGATTTGGCCTGGCCCGCACCCTAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | TCTCACCTACCACACCACACCAGAAGTAGGCCCTTGCTTCTCGCATaGCAGGCACCTGTGTCCAAGTGTGGAAGCGCGGGTCATAACGGT | + |
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Preference number: 5 (lower is better) Translates to: SHLPHHTRSRPLLLA*QAPVSKCGSAGHNG Trigger: ACCGTTATGACCCGCGCTTCCACACTTGGACACAGGTGCCTGCCATGCGAGAAGCAAGGGCCTACTTCTGGTGTGGTGTGGTAGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 90 bp | TCACGTCGCACAAGAAGCCCTCAGCGCGTAGGGCCTGGTAGCCAGTaGGAAGAGAGCTGCCGTGGGTTTTGCAGTAAGACAGGAAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: SRRTRSPQRVGPGSQ*EESCRGFCSKTGSN Trigger: GTTACTTCCTGTCTTACTGCAAAACCCACGGCAGCTCTCTTCTCACTGGCTACCAGGCCCTACGCGCTGAGGGCTTCTTGTGCGACGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | CATACACTGTGGCCTAGCAGTGGTGTGGGCAGCTGTGTCAAGCTGTaGCAGCTGTGGTTATACACGTCGAAGGACACCACATCCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: HTLWPSSGVGSCVKL*QLWLYTSKDTTSWV Trigger: CACCCAGGATGTGGTGTCCTTCGACGTGTATAACCACAGCTGGCACAGCTTGACACAGCTGCCCACACCACTGCTAGGCCACAGTGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | ACCATCTCCCTAGCTCTGAGACCACCAACTAGCAAGATACGGGTCTaGGGACTCCGAACACTAGTCTGTTCTCCCTGCAGAAGCGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TISLALRPPTSKIRV*GLRTLVCSPCRSGW Trigger: CCAGCCGCTTCTGCAGGGAGAACAGACTAGTGTTCGGAGTCCCCAGACCCGTATCTTGCTAGTTGGTGGTCTCAGAGCTAGGGAGATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | AGAAGCGGTCATAGGGTAGCGACCGCAACCGAGTCCACTGGTCTGTaGAGGGGTCATAGCGTTCAATCTCAGAGAAGGGCTCATATCTCC | + |
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Preference number: 5 (lower is better) Translates to: RSGHRVATATESTGL*RGHSVQSQRRAHIS Trigger: GGAGATATGAGCCCTTCTCTGAGATTGAACGCTATGACCCCTGCACAGACCAGTGGACTCGGTTGCGGTCGCTACCCTATGACCGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | TCCCCTCCAAGGACAAATAGGAAGTTGCCAGTGGTACATACACTGTaGCCTAGCAGTGGTGTGGGCAGCTGTGTCAAGCTGTGCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPPRTNRKLPVVHTL*PSSGVGSCVKLCQL Trigger: CAGCTGGCACAGCTTGACACAGCTGCCCACACCACTGCTAGGCCACAGTGTATGTACCACTGGCAACTTCCTATTTGTCCTTGGAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 90 bp | CCGAACACTAGTCTGTTCTCCCTGCAGAAGCGGCTGGCTGGAGGGTaGTGTATGGTAATTGAGGGCCTGGATGATGAGGCTTTTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: PNTSLFSLQKRLAGG*CMVIEGLDDEAFDP Trigger: AGGATCAAAAGCCTCATCATCCAGGCCCTCAATTACCATACAGCACCCTCCAGCCAGCCGCTTCTGCAGGGAGAACAGACTAGTGTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 90 bp | ATAGGAAGTTGCCAGTGGTACATACACTGTGGCCTAGCAGTGGTGTaGGCAGCTGTGTCAAGCTGTGCCAGCTGTGGTTATACACGTCGA | + |
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Preference number: 5 (lower is better) Translates to: IGSCQWYIHCGLAVV*AAVSSCASCGYTRR Trigger: TCGACGTGTATAACCACAGCTGGCACAGCTTGACACAGCTGCCCACACCACTGCTAGGCCACAGTGTATGTACCACTGGCAACTTCCTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 72 bp | CGTTCCGGGTTGGCACCTGGCGTGAGTCCCGCCACTTaGGACCACCCAGCAGCAGCACTGTCTCTTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: RSGLAPGVSPAT*DHPAAALSLPP Trigger: TGGTGGAAGAGACAGTGCTGCTGCTGGGTGGTCTCAAGTGGCGGGACTCACGCCAGGTGCCAACCCGGAACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 72 bp | GTCATAGCCCACTACGTTCCGGGTTGGCACCTGGCGTaGGTCCCGCCACTTGAGACCACCCAGCAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VIAHYVPGWHLA*VPPLETTQQQH Trigger: GTGCTGCTGCTGGGTGGTCTCAAGTGGCGGGACTCACGCCAGGTGCCAACCCGGAACGTAGTGGGCTATGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 72 bp | TCCTCCCTACCCTCGGGTAGCTGCAGCACTGCACACTaGAGGCCACTCCATGCCCAGGGCAGCACACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSLPSGSCSTAH*RPLHAQGSTQP Trigger: AGGCTGTGTGCTGCCCTGGGCATGGAGTGGCCTTCAGTGTGCAGTGCTGCAGCTACCCGAGGGTAGGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 72 bp | ACGTTCCGGGTTGGCACCTGGCGTGAGTCCCGCCACTaGAGACCACCCAGCAGCAGCACTGTCTCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: TFRVGTWRESRH*RPPSSSTVSST Trigger: GGTGGAAGAGACAGTGCTGCTGCTGGGTGGTCTCAAGTGGCGGGACTCACGCCAGGTGCCAACCCGGAACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 90 bp | CGGATGCATCCAAGCAGTGTTGAACTATGTGCCAGGCGCTGGACCTaGGGTTCCTGCTGCAGCCAGGCTAGTGCCAGGCCCAGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RMHPSSVELCARRWT*GSCCSQASARPSSR Trigger: GCGGCTGCTGGGCCTGGCACTAGCCTGGCTGCAGCAGGAACCCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 90 bp | GCACACCAGCAGGCACCAGGCCAAAGCGGATGCATCCAAGCAGTGTaGAACTATGTGCCAGGCGCTGGACCTTGGGTTCCTGCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AHQQAPGQSGCIQAV*NYVPGAGPWVPAAA Trigger: GGCTGCAGCAGGAACCCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCCGCTTTGGCCTGGTGCCTGCTGGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | GGTGGCGTACAATACAGCACTCCGCTGCACCTAGGGTaGGGGCCAGGCCAAATCGAGCTGCCACATTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GGVQYSTPLHLG*GPGQIELPHWQ Trigger: TTGCCAATGTGGCAGCTCGATTTGGCCTGGCCCGCACCCTAGGTGCAGCGGAGTGCTGTATTGTACGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | GCCGCAGCACACCAGCAGGCACCAGGCCAAAGCGGATaGATCCAAGCAGTGTTGAACTATGTGCCAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: AAAHQQAPGQSG*IQAVLNYVPGA Trigger: AGCGCCTGGCACATAGTTCAACACTGCTTGGATGCATCCGCTTTGGCCTGGTGCCTGCTGGTGTGCTGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 72 bp | CCACACCACACCAGAAGTAGGCCCTTGCTTCTCGCATaGCAGGCACCTGTGTCCAAGTGTGGAAGCGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: PHHTRSRPLLLA*QAPVSKCGSAG Trigger: ACCCGCGCTTCCACACTTGGACACAGGTGCCTGCCATGCGAGAAGCAAGGGCCTACTTCTGGTGTGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 72 bp | CAAGTAGTGGGCACACAGTCCCAAGGCCTCGGTGACTaGCAGGTAGCTGGCAGCCTCCAGAGTGTCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QVVGTQSQGLGD*QVAGSLQSVLH Trigger: GTGGAGGACACTCTGGAGGCTGCCAGCTACCTGCAAGTCACCGAGGCCTTGGGACTGTGTGCCCACTACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 90 bp | CAGCCAGGAGACTCTCACCTACCACACCACACCAGAAGTAGGCCCTaGCTTCTCGCATGGCAGGCACCTGTGTCCAAGTGTGGAAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: QPGDSHLPHHTRSRP*LLAWQAPVSKCGSA Trigger: CGCGCTTCCACACTTGGACACAGGTGCCTGCCATGCGAGAAGCAAGGGCCTACTTCTGGTGTGGTGTGGTAGGTGAGAGTCTCCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 72 bp | GTTCCAAGTAGTGGGCACACAGTCCCAAGGCCTCGGTaGCTTGCAGGTAGCTGGCAGCCTCCAGAGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VPSSGHTVPRPR*LAGSWQPPECP Trigger: AGGACACTCTGGAGGCTGCCAGCTACCTGCAAGTCACCGAGGCCTTGGGACTGTGTGCCCACTACTTGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | CATACATCTCCACTGAGGCCAGTGCCTCACCACAGATaGCCAGGCCTCCGACAGCCAGGAGACTCTCACCTA | + |
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Preference number: 6 (lower is better) Translates to: HTSPLRPVPHHR*PGLRQPGDSHL Trigger: TAGGTGAGAGTCTCCTGGCTGTCGGAGGCCTGGGCATCTGTGGTGAGGCACTGGCCTCAGTGGAGATGTATG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | GGAGGCTACTTGTGCCTCCTTCACCTCTCCCAGCCTTaGCCCCGGAGATGTACACAACACCATGATCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: GGYLCLLHLSQP*PRRCTQHHDPR Trigger: TCGGGGATCATGGTGTTGTGTACATCTCCGGGGGCAAGGCTGGGAGAGGTGAAGGAGGCACAAGTAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 90 bp | TCCGCTGCACCTAGGGTGCGGGCCAGGCCAAATCGAGCTGCCACATaGGCAATGAAACAGCAATTCTCTGGGGCAAGCTGGCGTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SAAPRVRARPNRAAT*AMKQQFSGASWRSK Trigger: CTTGGAACGCCAGCTTGCCCCAGAGAATTGCTGTTTCATTGCCAATGTGGCAGCTCGATTTGGCCTGGCCCGCACCCTAGGTGCAGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 72 bp | ATGCATCCAAGCAGTGTTGAACTATGTGCCAGGCGCTaGACCTTGGGTTCCTGCTGCAGCCAGGCTAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: MHPSSVELCARR*TLGSCCSQASA Trigger: GGCACTAGCCTGGCTGCAGCAGGAACCCAAGGTCCAGCGCCTGGCACATAGTTCAACACTGCTTGGATGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CAA 72 bp | CCTAGGGTGCGGGCCAGGCCAAATCGAGCTGCCACATaGGCAATGAAACAGCAATTCTCTGGGGCAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRVRARPNRAAT*AMKQQFSGASW Trigger: CCAGCTTGCCCCAGAGAATTGCTGTTTCATTGCCAATGTGGCAGCTCGATTTGGCCTGGCCCGCACCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS TCA 72 bp | TGCGGGCCAGGCCAAATCGAGCTGCCACATTGGCAATaGAACAGCAATTCTCTGGGGCAAGCTGGCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: CGPGQIELPHWQ*NSNSLGQAGVP Trigger: TGGAACGCCAGCTTGCCCCAGAGAATTGCTGTTTCATTGCCAATGTGGCAGCTCGATTTGGCCTGGCCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | AGTCTGTTCTCCCTGCAGAAGCGGCTGGCTGGAGGGTaGTGTATGGTAATTGAGGGCCTGGATGATGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLFSLQKRLAGG*CMVIEGLDDEA Trigger: AGCCTCATCATCCAGGCCCTCAATTACCATACAGCACCCTCCAGCCAGCCGCTTCTGCAGGGAGAACAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | ACTCTCACCTACCACACCACACCAGAAGTAGGCCCTTaGTTCTCGCATGGCAGGCACCTGTGTCCAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TLTYHTTPEVGP*FSHGRHLCPSV Trigger: CACACTTGGACACAGGTGCCTGCCATGCGAGAAGCAAGGGCCTACTTCTGGTGTGGTGTGGTAGGTGAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | CATAGGGTAGCGACCGCAACCGAGTCCACTGGTCTGTaGAGGGGTCATAGCGTTCAATCTCAGAGAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HRVATATESTGL*RGHSVQSQRRA Trigger: AGCCCTTCTCTGAGATTGAACGCTATGACCCCTGCACAGACCAGTGGACTCGGTTGCGGTCGCTACCCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 72 bp | AGTGGTGTGGGCAGCTGTGTCAAGCTGTGCCAGCTGTaGTTATACACGTCGAAGGACACCACATCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGVGSCVKLCQL*LYTSKDTTSWV Trigger: CACCCAGGATGTGGTGTCCTTCGACGTGTATAACCACAGCTGGCACAGCTTGACACAGCTGCCCACACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 72 bp | TGCCAGTGGTACATACACTGTGGCCTAGCAGTGGTGTaGGCAGCTGTGTCAAGCTGTGCCAGCTGTGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: CQWYIHCGLAVV*AAVSSCASCGY Trigger: ATAACCACAGCTGGCACAGCTTGACACAGCTGCCCACACCACTGCTAGGCCACAGTGTATGTACCACTGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS GCA 72 bp | CAGGAAGGCTCTCCCCTCCAAGGACAAATAGGAAGTTaGCAGTGGTACATACACTGTGGCCTAGCAGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QEGSPLQGQIGS*QWYIHCGLAVV Trigger: CACCACTGCTAGGCCACAGTGTATGTACCACTGGCAACTTCCTATTTGTCCTTGGAGGGGAGAGCCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 72 bp | CTAGCTCTGAGACCACCAACTAGCAAGATACGGGTCTaGGGACTCCGAACACTAGTCTGTTCTCCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LALRPPTSKIRV*GLRTLVCSPCR Trigger: TCTGCAGGGAGAACAGACTAGTGTTCGGAGTCCCCAGACCCGTATCTTGCTAGTTGGTGGTCTCAGAGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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| CDS CCA 72 bp | AGGACAAATAGGAAGTTGCCAGTGGTACATACACTGTaGCCTAGCAGTGGTGTGGGCAGCTGTGTCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RTNRKLPVVHTL*PSSGVGSCVKL Trigger: CAGCTTGACACAGCTGCCCACACCACTGCTAGGCCACAGTGTATGTACCACTGGCAACTTCCTATTTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087157.5 |
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