Pregenerated sensors for KLHL33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090799Ensembl transcript IDs: ENSMUST00000164415.2, ENSMUST00000170855.2, ENSMUST00000227271.2
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTaGTGGGATCAAAGGCGTGCACCCCCACACCCGTCTATCCCAACT | + |
|
Preference number: 1 (lower is better) Translates to: RLASNSEIHLPLPPE*WDQRRAPPHPSIPT Trigger: AGTTGGGATAGACGGGTGTGGGGGTGCACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | CAAGGATGCTCTCTGCTTGGCCTTTCTCCTCCCCAACCCCTAGAGTaGTCCCACCTCACCCTGCTAGTCCTGCCTGGCTTCAGGTTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: QGCSLLGLSPPQPLE*SHLTLLVLPGFRFL Trigger: CAGGAACCTGAAGCCAGGCAGGACTAGCAGGGTGAGGTGGGAGCACTCTAGGGGTTGGGGAGGAGAAAGGCCAAGCAGAGAGCATCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | CTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTaGGATCAAAGGCGTGCACCCCCACACCCGTCTATCCCAACTCTT | + |
|
Preference number: 1 (lower is better) Translates to: LASNSEIHLPLPPEC*DQRRAPPHPSIPTL Trigger: AAGAGTTGGGATAGACGGGTGTGGGGGTGCACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | AAGTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGCCTCCCGAGTGCTGGGATCAAAGGCGTGCACCCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: KSLCRPGWPRTQKST*LCLPSAGIKGVHPH Trigger: GTGGGGGTGCACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | TGCTCCCACCTCACCCTGCTAGTCCTGCCTGGCTTCAGGTTCCTGTaGTGTGCAATTCTTGATGGGAGCTTCTCCCTTTTGGTGTTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: CSHLTLLVLPGFRFL*CAILDGSFSLLVFV Trigger: AACAAACACCAAAAGGGAGAAGCTCCCATCAAGAATTGCACAGCACAGGAACCTGAAGCCAGGCAGGACTAGCAGGGTGAGGTGGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | TGCTCTTCCCAAGGACCAGGGATCAGTTCCCAGCATCCACACTGTTaGTCACAACCATCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: CSSQGPGISSQHPHC*SQPSVSPAPKDLLF Trigger: GAACAGCAGATCCTTTGGAGCTGGACTTACAGATGGTTGTGAGCAACAGTGTGGATGCTGGGAACTGATCCCTGGTCCTTGGGAAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | AGACTGCCTCAAATCACAAAAGCAGGGGGTGGAAAGATAGCTCAGTaGTTTGCTCTTCCCAAGGACCAGGGATCAGTTCCCAGCATCCAC | + |
|
Preference number: 1 (lower is better) Translates to: RLPQITKAGGGKIAQ*FALPKDQGSVPSIH Trigger: GTGGATGCTGGGAACTGATCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTTTGTGATTTGAGGCAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | GAGCTCAAGGTCATCCTTGACTACATAGGGAGTTGTAAGCCAGCCTaGGATACAAGAGACCCTGTCAATCATCATCACCGACATCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: ELKVILDYIGSCKPA*DTRDPVNHHHRHHH Trigger: GTGGTGATGTCGGTGATGATGATTGACAGGGTCTCTTGTATCCCAGGCTGGCTTACAACTCCCTATGTAGTCAAGGATGACCTTGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | TCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTaGAGGCACCAGATACAAATGTGTGCACAGATATGCAAGCAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: SVSPAPKDLLFSSGL*RHQIQMCAQICKQN Trigger: GTTTTGCTTGCATATCTGTGCACACATTTGTATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACTTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | CTTGAAACAGTTCAAATCCTGATCCTCCTGCTTCCTCCTTTCAAGTaGCAGAATTCCCTGGGTATACCACCTAATGGTACAGCCCGTGTA | + |
|
Preference number: 1 (lower is better) Translates to: LETVQILILLLPPFK*QNSLGIPPNGTARV Trigger: TACACGGGCTGTACCATTAGGTGGTATACCCAGGGAATTCTGGCACTTGAAAGGAGGAAGCAGGAGGATCAGGATTTGAACTGTTTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | GTCCGGGTGTCTAGGAAAACAATTCAACTGCGCATGTGCATTTCTTaGTGGCTCTGGAGAAGCACCAAAAAGGACATTCTTGCTGAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: VRVSRKTIQLRMCIS*WLWRSTKKDILAEA Trigger: TGCTTCAGCAAGAATGTCCTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGTTGAATTGTTTTCCTAGACACCCGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR CCA 90 bp | CAAGTAAGACCGTCTTCTCCTCTCATAAGTTCTGTCCTTTTGTCGTaGTATTGCTTATCCCTTCCTCCCTCACAACCTGCTGATCCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: QVRPSSPLISSVLLS*YCLSLPPSQPADPQ Trigger: CTGAGGATCAGCAGGTTGTGAGGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGAAGACGGTCTTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | ACAACCATCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTaGCCTCTGCAGGCACCAGATACAAATGTGTGCACAGATATGCAA | + |
|
Preference number: 1 (lower is better) Translates to: TTICKSSSKGSAVLF*PLQAPDTNVCTDMQ Trigger: TTGCATATCTGTGCACACATTTGTATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACTTACAGATGGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | CATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTaGAGTCAAGGCTGGGCCTACAAAACTACCCAAGAAAGAATATGG | + |
|
Preference number: 1 (lower is better) Translates to: HFCLKWELKDSTGNL*SQGWAYKTTQERIW Trigger: CCATATTCTTTCTTGGGTAGTTTTGTAGGCCCAGCCTTGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 90 bp | TCTATCAGTTCAAATCTGTCCGGGTGTCTAGGAAAACAATTCAACTaGGCATGTGCATTTCTTGGTGGCTCTGGAGAAGCACCAAAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: SISSNLSGCLGKQFN*ACAFLGGSGEAPKR Trigger: CCTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGTTGAATTGTTTTCCTAGACACCCGGACAGATTTGAACTGATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR GCA 90 bp | TTCAAATCTGTCCGGGTGTCTAGGAAAACAATTCAACTGCGCATGTaGATTTCTTGGTGGCTCTGGAGAAGCACCAAAAAGGACATTCTT | + |
|
Preference number: 1 (lower is better) Translates to: FKSVRVSRKTIQLRM*ISWWLWRSTKKDIL Trigger: AAGAATGTCCTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGTTGAATTGTTTTCCTAGACACCCGGACAGATTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR GCA 90 bp | CTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTATCTaGCAATCTTTTCTCCAAGGCCTGCTTCCCATGAGTTCTAGAAGT | + |
|
Preference number: 1 (lower is better) Translates to: LVEFFLVASYTQIFI*QSFLQGLLPMSSRS Trigger: ACTTCTAGAACTCATGGGAAGCAGGCCTTGGAGAAAAGATTGGCAGATAAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 90 bp | TCTAGGAAAACAATTCAACTGCGCATGTGCATTTCTTGGTGGCTCTaGAGAAGCACCAAAAAGGACATTCTTGCTGAAGCAATAATACAA | + |
|
Preference number: 1 (lower is better) Translates to: SRKTIQLRMCISWWL*RSTKKDILAEAIIQ Trigger: TTGTATTATTGCTTCAGCAAGAATGTCCTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGTTGAATTGTTTTCCTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGACTGAAGTCTGCTGCCAGAGTCAAACACACCTAGGACAAAGGACACACTGGGCCTCGGCTGCCCTTTaGTGTGTGCTGAGTAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: QTEVCCQSQTHLGQRTHWASAAL*CVLSRC Trigger: GCATCTACTCAGCACACAGCAAAGGGCAGCCGAGGC...CCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCAGCAGACTTCAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGAAGATGGGGTAGAGCATaGAATCCTAGCACCCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: KAGGGKIAQWFALPKDQGRWGRA*NPSTQG Trigger: CCCCTGGGTGCTAGGATTGCATGCTCTACCCCATCT...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 90 bp | CAATCAAGATGGGGTAGAGCATGCAATCCTAGCACCCAGGGGATTTaGAGTTTGAAGCCAGCCCAGGCTACATATCAAGTTCAAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QSRWGRACNPSTQGI*SLKPAQATYQVQGQ Trigger: CTGGCCTTGAACTTGATATGTAGCCTGGGCTGGCTTCAAACTCAAAATCCCCTGGGTGCTAGGATTGCATGCTCTACCCCATCTTGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCATCTGCTGTTCTCTTCTaGCCTCTGCAGGCACCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: AFLSQVGTKRLHRQPVESSAVLF*PLQAPD Trigger: ATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGA...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCTCCTCTTTGGTAACTaGGCATGGTGGCACACGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SWFLSSSKGKERHLSGFSLLFGN*AWWHTP Trigger: AGGCGTGTGCCACCATGCCCAGTTACCAAAGAGGAG...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 90 bp | GCCCTTTGCTGTGTGCTGAGTAGATGCCAAAAGGCTCTAGCTAATTaGTTTGAGTCAGTCTCTTTCTCCCTGTTTTGCTGCCATGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: ALCCVLSRCQKALAN*FESVSFSLFCCHGL Trigger: CAGTCCATGGCAGCAAAACAGGGAGAAAGAGACTGACTCAAACAAATTAGCTAGAGCCTTTTGGCATCTACTCAGCACACAGCAAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR CAA 90 bp | CCTTCTCAGCCATGTTCTCTCATCGTCTTGATCCCATCCTGGTTCTaGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PSQPCSLIVLIPSWF*SSSKGKERHLSGFS Trigger: GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGATGGGATCAAGACGATGAGAGAACATGGCTGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCCCACCATCATCACCATaGCTCTCAATCAAGATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: KLPSQLPFFICHLLSHVLPPSSP*LSIKMG Trigger: CCCCATCTTGATTGAGAGGCATGGTGATGATGGTGG...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCAGCTCCAAAGGATCTaGTGTTCTCTTCTGGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SWFLSSSKGKERHLSGFSQLQRI*CSLLAS Trigger: AGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTG...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCTTTAATCCCAGCACTTaGGAGGCAGAGGCAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SWFLSSSKGKERHLSGFSFNPST*EAEADR Trigger: TCTGTCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGGCCTGGTCTACAGAGTaGGTTCCAGGAGAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FQLYSLPILNIDIYPIMVAWSTE*VPGEPG Trigger: CCCTGGCTCTCCTGGAACTCACTCTGTAGACCAGGC...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCGCCTCTCAATCAAGATaGGGTAGAGCATGCAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: KLPSQLPFFICHLLSHVLASQSR*GRACNP Trigger: AGGATTGCATGCTCTACCCCATCTTGATTGAGAGGC...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTAGTTGTAAGCCAGCCTaGGATACAAGAGACCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSLILVEFFLVASYTQIFSCKPA*DTRDPV Trigger: GACAGGGTCTCTTGTATCCCAGGCTGGCTTACAACT...AAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTTTGTGGAGTTCTTCCTaGTTGCCTCCTATACCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SKGKERHLSGFSHHLIKPLWSSS*LPPIPK Trigger: TTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAA...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTAGTGCCAGAATTCCCTaGGTATACCACCTAATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SKGKERHLSGFSHHLIKPSARIP*VYHLMV Trigger: TACCATTAGGTGGTATACCCAGGGAATTCTGGCACT...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCATGTGTGCACAGATATaGAAGCAAAACACCCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: KLPSQLPFFICHLLSHVLMCAQI*KQNTHL Trigger: GAGATGGGTGTTTTGCTTGCATATCTGTGCACACAT...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTTTTTTCTACCAAGGATaGTCTCTGCTTGGCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKGKERHLSGFSHHLIKPFFYQG*SLLGLS Trigger: AGAAAGGCCAAGCAGAGAGCATCCTTGGTAGAAAAA...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTGGAAAGATAGCTCAGTaGTTTGCTCTTCCCAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSLILVEFFLVASYTQIFGKIAQ*FALPKD Trigger: GTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCC...AAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGAAAACTCCTCTTTGCTaGGCAGTGGTGACACAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FQLYSLPILNIDIYPIMVKTPLC*AVVTQA Trigger: GGCTTGTGTCACCACTGCCCAGCAAAGAGGAGTTTT...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTAAAATTCAGGCATCCTaGAGACTAGAGAGTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: SKGKERHLSGFSHHLIKPKIQAS*RLESKM Trigger: CATTTTACTCTCTAGTCTCCAGGATGCCTGAATTTT...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCGAGTGCTGGGATCAAAGGCGTGCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSTCL*LPSAGIKGVHP Trigger: GGGGTGCACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | TCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTaGTGGGATCAAAGGCGTGCACCCCCACACCCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SNSEIHLPLPPE*WDQRRAPPHPS Trigger: AGACGGGTGTGGGGGTGCACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | TCTCTGCTTGGCCTTTCTCCTCCCCAACCCCTAGAGTaGTCCCACCTCACCCTGCTAGTCCTGCCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLLGLSPPQPLE*SHLTLLVLPGF Trigger: GAAGCCAGGCAGGACTAGCAGGGTGAGGTGGGAGCACTCTAGGGGTTGGGGAGGAGAAAGGCCAAGCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGCCTCCCGAGTGCTGGGATCAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKST*LCLPSAGIKGV Trigger: CACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | AACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTaGGATCAAAGGCGTGCACCCCCACACCCGTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: NSEIHLPLPPEC*DQRRAPPHPSI Trigger: GATAGACGGGTGTGGGGGTGCACGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | CTCACCCTGCTAGTCCTGCCTGGCTTCAGGTTCCTGTaGTGTGCAATTCTTGATGGGAGCTTCTCCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LTLLVLPGFRFL*CAILDGSFSLL Trigger: CAAAAGGGAGAAGCTCCCATCAAGAATTGCACAGCACAGGAACCTGAAGCCAGGCAGGACTAGCAGGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACTGAAGTCTGCTGCCAGAGTCAAACACACCTAGGACAAAGGACACACTGGGCGCATGTGCATTTCTaGGTGGCTCTGGAGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QTEVCCQSQTHLGQRTHWAHVHF*VALEKH Trigger: GTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGC...CCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCAGCAGACTTCAGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR GCA 72 bp | ACTGGGAAACTTGTACTGATGGCCTCGGCTGCCCTTTaGTGTGTGCTGAGTAGATGCCAAAAGGCTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGKLVLMASAAL*CVLSRCQKALA Trigger: AGCTAGAGCCTTTTGGCATCTACTCAGCACACAGCAAAGGGCAGCCGAGGCCATCAGTACAAGTTTCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR GCA 72 bp | CACAAAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTaGTCTTCCCAAGGACCAGGGATCAGTTCCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HKSRGWKDSSVV*SSQGPGISSQH Trigger: ATGCTGGGAACTGATCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | TGCCAGAGTCAAACACACCTAGGACAAAGGACACACTaGGAAACTTGTACTGATGGCCTCGGCTGCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CQSQTHLGQRTH*ETCTDGLGCPL Trigger: CAAAGGGCAGCCGAGGCCATCAGTACAAGTTTCCCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR CCA 72 bp | CACCACCACCATCATCACCATGCCTCTCAATCAAGATaGGGTAGAGCATGCAATCCTAGCACCCAGGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: HHHHHHHASQSR*GRACNPSTQGI Trigger: AATCCCCTGGGTGCTAGGATTGCATGCTCTACCCCATCTTGATTGAGAGGCATGGTGATGATGGTGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCACAACCATCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCAGGGGATTTTGAGTTaGAAGCCAGCCCAGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CSQPSVSPAPKDLLFSSGQGILS*KPAQAT Trigger: TGTAGCCTGGGCTGGCTTCAAACTCAAAATCCCCTG...GCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACTTACAGATGGTTGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | CAAGGACCAGGGATCAGTTCCCAGCATCCACACTGTTaGTCACAACCATCTGTAAGTCCAGCTCCAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QGPGISSQHPHC*SQPSVSPAPKD Trigger: ATCCTTTGGAGCTGGACTTACAGATGGTTGTGAGCAACAGTGTGGATGCTGGGAACTGATCCCTGGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCTGCTGCCAGAGTCAAACACACCTAGGACAAAGGACACACTGGGAAACTCTCTTTCTCCCTGTTTaGCTGCCATGGACTGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: EVCCQSQTHLGQRTHWETLFLPV*LPWTVL Trigger: GAGTACAGTCCATGGCAGCAAAACAGGGAGAAAGAG...AGTTTCCCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCAGCAGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR GCA 72 bp | ATGGCCTCGGCTGCCCTTTGCTGTGTGCTGAGTAGATaGCAAAAGGCTCTAGCTAATTTGTTTGAGTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MASAALCCVLSR*QKALANLFESV Trigger: GACTGACTCAAACAAATTAGCTAGAGCCTTTTGGCATCTACTCAGCACACAGCAAAGGGCAGCCGAGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR CCA 72 bp | CTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTaGAGTCAAGGCTGGGCCTACAAAACTACCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKWELKDSTGNL*SQGWAYKTTQE Trigger: TTCTTGGGTAGTTTTGTAGGCCCAGCCTTGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | TGGTGGTCCACACCTGTAATCCCAAGACTCTGGTGTTaGAAACAAGGAGGATCAGAAGTTCAAGGACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: WWSTPVIPRLWC*KQGGSEVQGHP Trigger: GGGATGTCCTTGAACTTCTGATCCTCCTTGTTTCCAACACCAGAGTCTTGGGATTACAGGTGTGGACCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCAAGGATGCTCTCTGCTaGGCCTTTCTCCTCCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SWFLSSSKGKERHLSGFSKDALC*AFLLPN Trigger: GTTGGGGAGGAGAAAGGCCAAGCAGAGAGCATCCTT...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | GTCCGGGTGTCTAGGAAAACAATTCAACTGCGCATGTaGATTTCTTGGTGGCTCTGGAGAAGCACCAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VRVSRKTIQLRM*ISWWLWRSTKK Trigger: CTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGTTGAATTGTTTTCCTAGACACCCGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR GCA 72 bp | GGGAAGGGGCTGACAAGAAGAAACTTCCTTCCCAACTaGCTTTCTTTATCTGTCACCTTCTCAGCCATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GKGLTRRNFLPN*LSLSVTFSAMF Trigger: GAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTTCTTCTTGTCAGCCCCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | CCGTCTTCTCCTCTCATAAGTTCTGTCCTTTTGTCGTaGTATTGCTTATCCCTTCCTCCCTCACAACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSSPLISSVLLS*YCLSLPPSQPA Trigger: AGCAGGTTGTGAGGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGAAGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | GTCATCCTTGACTACATAGGGAGTTGTAAGCCAGCCTaGGATACAAGAGACCCTGTCAATCATCATCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: VILDYIGSCKPA*DTRDPVNHHHR Trigger: TCGGTGATGATGATTGACAGGGTCTCTTGTATCCCAGGCTGGCTTACAACTCCCTATGTAGTCAAGGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR TCA 72 bp | AGGGAGGACTGTTTAGTTCCCTCCAAACTCCTCCACTaGTTTTTGAAATGTCCCAGTGTTTTCCTGGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: REDCLVPSKLLH*FLKCPSVFLVP Trigger: AGGGACCAGGAAAACACTGGGACATTTCAAAAATCAGTGGAGGAGTTTGGAGGGAACTAAACAGTCCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTaGTTATCCCTTCCTCCCTCACAACCTGCTGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SPLISSVLLSWY*LSLPPSQPADP Trigger: AGGATCAGCAGGTTGTGAGGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | GTTCAAATCCTGATCCTCCTGCTTCCTCCTTTCAAGTaGCAGAATTCCCTGGGTATACCACCTAATGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: VQILILLLPPFK*QNSLGIPPNGT Trigger: TGTACCATTAGGTGGTATACCCAGGGAATTCTGGCACTTGAAAGGAGGAAGCAGGAGGATCAGGATTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | CATAATGAGACTGCCTCAAATCACAAAAGCAGGGGGTaGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HNETASNHKSRG*KDSSVVCSSQG Trigger: TCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTTTGTGATTTGAGGCAGTCTCATTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | CTAAAAGACTCCACAGGCAACCTGTGGAGTCAAGGCTaGGCCTACAAAACTACCCAAGAAAGAATATGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKDSTGNLWSQG*AYKTTQERIWL Trigger: TAGCCATATTCTTTCTTGGGTAGTTTTGTAGGCCCAGCCTTGACTCCACAGGTTGCCTGTGGAGTCTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | TCTCAGCCATGTTCTCTCATCGTCTTGATCCCATCCTaGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SQPCSLIVLIPS*FLSSSKGKERH Trigger: ATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGATGGGATCAAGACGATGAGAGAACATGGCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCTGGAGTTCTTCCTGGTaGCCTCCTATACCCAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: SWFLSSSKGKERHLSGFSWSSSW*PPIPKY Trigger: ATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCA...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CCA 72 bp | AGGAAAACAATTCAACTGCGCATGTGCATTTCTTGGTaGCTCTGGAGAAGCACCAAAAAGGACATTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RKTIQLRMCISW*LWRSTKKDILA Trigger: AGCAAGAATGTCCTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGTTGAATTGTTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTCAGGAAGTCCTAAGGTaGATCAGGGGTGGTAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: SSLILVEFFLVASYTQIFQEVLR*IRGGSI Trigger: TATACTACCACCCCTGATCAACCTTAGGACTTCCTG...AAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGCCTTTTGTCGTGGTATaGCTTATCCCTTCCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FQLYSLPILNIDIYPIMVPFVVV*LIPSSL Trigger: GAGGGAGGAAGGGATAAGCAATACCACGACAAAAGG...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCAGAATAAAGCCTTCTTaGAGGGTTAAGAATAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KLPSQLPFFICHLLSHVLRIKPS*RVKNRG Trigger: ACCTCTATTCTTAACCCTCAAAGAAGGCTTTATTCT...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGCCTGGTCCCTATACTTaGATTACTGAAGTCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FQLYSLPILNIDIYPIMVPGPYT*ITEVWV Trigger: AACCCAGACTTCAGTAATCAAAGTATAGGGACCAGG...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR GCA 72 bp | AAACTCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTaGCTCCTATACCCAAATATTTATCTGCCAATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KLLFNPCGVLPG*LLYPNIYLPIF Trigger: AAAGATTGGCAGATAAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGACAGCACTTCGTCCTGTaGGGCGGGGCCCAGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGGGKIAQWFALPKDQGQHFVL*GGAQHP Trigger: GGGGTGCTGGGCCCCGCCTCACAGGACGAAGTGCTG...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGACAGTGCCTTGGCCTCTaGCTCGTGGGTCTCGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAGGGKIAQWFALPKDQGQCLGL*LVGLGV Trigger: AACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTG...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATATGCTCCCAGCGCCTCTaGAGCAGCCAGCACTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQICSQRL*SSQHFV Trigger: GACGAAGTGCTGGCTGCTGCAGAGGCGCTGGGAGCA...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | CAGACTGAAGTCTGCTGCCAGAGTCAAACACACCTAGGACAAAGGACACACTGGTGCTCCCAGCGCCTCTaGAGCAGCCAGCACTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTEVCCQSQTHLGQRTHWCSQRL*SSQHFV Trigger: GACGAAGTGCTGGCTGCTGCAGAGGCGCTGGGAGCA...CCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCAGCAGACTTCAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCGCATGTGCATTTCTTGGTGGCTCTGGAGAAGCACCAAAAAGGACATTCTCTTCTTCACCCGGGGTaGTCCCAGCGCCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAHVHFLVALEKHQKGHSLLHPG*SQRLCS Trigger: GCTGCAGAGGCGCTGGGAGCACCCCGGGTGAAGAAG...AGAATGTCCTTTTTGGTGCTTCTCCAGAGCCACCAAGAAATGCACATGCGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCACAACCATCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCGGGTCACATCAAGGCTaGAACTGGGCTGCTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQPSVSPAPKDLLFSSGGSHQG*NWAADP Trigger: GGGGTCAGCAGCCCAGTTTCAGCCTTGATGTGACCC...GCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACTTACAGATGGTTGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATACATGCCACAGTGAAATaGCCGGGCCCACCACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQIHATVK*PGPPHF Trigger: AAAGTGTGGTGGGCCCGGGCATTTCACTGTGGCATG...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCCGTGGGTCTCGGGGTTaGCAGCCAGCCAACACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLISSVLLSWYCLSLPPRGSRG*QPANTV Trigger: CACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACG...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGACCACCACACTTTGCATaGTGGCTGTCTTCGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAGGGKIAQWFALPKDQGPPHFA*WLSSVH Trigger: ATGGACCGAAGACAGCCATCATGCAAAGTGTGGTGG...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATAGACTGGAACTCCATCTaGGAGTTGAAGCCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQIDWNSI*ELKPEC Trigger: GCACTCTGGCTTCAACTCTCAGATGGAGTTCCAGTC...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AGATGCCAAAAGGCTCTAGCTAATTTGTTTGAGTCAGTCTCTTTCTCCCTGTTTCAGCACTTCGTCCTGTaGGGCGGGGCCCAGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCQKALANLFESVSFSLFQHFVL*GGAQHP Trigger: GGGGTGCTGGGCCCCGCCTCACAGGACGAAGTGCTG...AAACAGGGAGAAAGAGACTGACTCAAACAAATTAGCTAGAGCCTTTTGGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCACAACCATCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCGCAGAGTCACCTTTGTaGCCTGGGACTCCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQPSVSPAPKDLLFSSGAESPL*PGTPSS Trigger: GGATGAGGGAGTCCCAGGGCACAAAGGTGACTCTGC...GCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACTTACAGATGGTTGTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATAGGGGCAGAGGCTTTGTaGCAAGGCTTTCTGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQIGAEAL*QGFLTQ Trigger: TTGTGTCAGAAAGCCTTGGCACAAAGCCTCTGCCCC...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCAGGGGGAGGGCAAGGATaGCAGCTGAGTCCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: AFLSQVGTKRLHRQPVESGGGQG*QLSPAI Trigger: GATAGCTGGACTCAGCTGGCATCCTTGCCCTCCCCC...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCTTCTTCACCCGGGGTaGTCCCAGCGCCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSSKGKERHLSGFSLLHPG*SQRLCS Trigger: GCTGCAGAGGCGCTGGGAGCACCCCGGGTGAAGAAG...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGATGGAAGAGCAGGTGCTaGCCTCCAGACATTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGGGKIAQWFALPKDQGWKSRC*PPDIEF Trigger: GAACTCAATGTCTGGAGGCCAGCACCTGCTCTTCCA...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCAGACCCATGCCACAGTaGAATGCCCGGGCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSSKGKERHLSGFSRPMPQ*NARAHH Trigger: GTGGTGGGCCCGGGCATTTCACTGTGGCATGGGTCT...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATACTGGCCTCCAGACATTaGGTTCAGGGTTATAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQILASRH*VQGYRS Trigger: AGACCTATAACCCTGAACTCAATGTCTGGAGGCCAG...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | CAGACTGAAGTCTGCTGCCAGAGTCAAACACACCTAGGACAAAGGACACACTGGAAAGGGAAGGTTTCCTaGAACGAAGGGGCTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTEVCCQSQTHLGQRTHWKGKVS*NEGARW Trigger: CCACCTAGCCCCTTCGTTTCAGGAAACCTTCCCTTT...CCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCAGCAGACTTCAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR CCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCAATCACCACCAGGGCTTaGTCAGGCTCCCTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLSQVGTKRLHRQPVESITTRA*SGSLHL Trigger: GAGATGGAGGGAGCCTGACCAAGCCCTGGTGGTGAT...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCCGGGCAACTCCCATTaGGCTCAGAAGCGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSSKGKERHLSGFSPGNSH*AQKRPR Trigger: CCTGGGACGCTTCTGAGCCCAATGGGAGTTGCCCGG...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATACTATGTGCTGCACACTaGGCAATGTCAAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQILCAAH*AMSRCR Trigger: CCTGCATCTTGACATTGCCCAGTGTGCAGCACATAG...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCACAACCATCTGTAAGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCAAGGATAGCAGCTaGATGGGCAAAGCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSQPSVSPAPKDLLFSSGLKDSS*MGKAWS Trigger: GCTCCATGCTTTGCCCATGCAGCTGCTATCCTTGAG...GCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACTTACAGATGGTTGTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCATGGGCAATGTCAAGATaGAGGCCGGCATCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLSQVGTKRLHRQPVESWAMSR*RPASQL Trigger: GAGCTGAGATGCCGGCCTGCATCTTGACATTGCCCA...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATAACCAAAGCTATGTGCTaGACACTGGGCAATGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQITKAMC*TLGNVK Trigger: CTTGACATTGCCCAGTGTGCAGCACATAGCTTTGGT...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGACCATCTCTCTTGACCTaGAACTTCAGCTTCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAGGGKIAQWFALPKDQGPSLLT*NFSFHH Trigger: ATGGTGGAAGCTGAAGTTCCAGGTCAAGAGAGATGG...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCGGCAAAGCATGGAGCTaGAAGAGCAGGTGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLISSVLLSWYCLSLPPGKAWS*KSRCWP Trigger: AGGCCAGCACCTGCTCTTCCAGCTCCATGCTTTGCC...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCACCAACACCGTGCAGCTaGGAAAGCCTCAAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLSQVGTKRLHRQPVESPTPCS*ESLKLF Trigger: GAAGAGTTTGAGGCTTTCTCAGCTGCACGGTGTTGG...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATAGGTTTGTTTTGGTGCTaGGTAGGAACCAAAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQIGLFWC*VGTKAM Trigger: CATAGCTTTGGTTCCTACTCAGCACCAAAACAAACC...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATAGCCTCAAACTCTTCTTaGACATGGAGTTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPKDLLFSSGLCRHQIASNSS*TWSSSL Trigger: CAGTGATGAACTCCATGTGCAAGAAGAGTTTGAGGC...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCGTCCCCTACTCCACCTaGCACATACAACTTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SPLISSVLLSWYCLSLPPVPYST*HIQLPT Trigger: GGTGGGAAGTTGTATGTGGCAGGTGGAGTAGGGGAC...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | CAGACTGAAGTCTGCTGCCAGAGTCAAACACACCTAGGACAAAGGACACACTGGATAGGAAGGGAGACATaGTCCAAGTCTGAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTEVCCQSQTHLGQRTHWIGRET*SKSEER Trigger: CCTTTCCTCAGACTTGGAGCATGTCTCCCTTCCTAT...CCAGTGTGTCCTTTGTCCTAGGTGTGTTTGACTCTGGCAGCAGACTTCAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR GCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCTGCTCCCGCAGTCTCTaGGCTTCAGCGAAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPSQLPFFICHLLSHVLCSRSL*ASAKNW Trigger: CCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCA...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCGCCAAGATCACCCGATaGACCCCATATACCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLISSVLLSWYCLSLPPAKITR*TPYTCP Trigger: GGGACAGGTATATGGGGTGCATCGGGTGATCTTGGC...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCATCGCAACAGTGCCTTaGCCTCTGACTCGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLISSVLLSWYCLSLPPIATVP*PLTRGS Trigger: AGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGAT...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 72 bp | AGAGCATGCAATCCTAGCACCCAGGGGATTTTGAGTTaGAAGCCAGCCCAGGCTACATATCAAGTTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RACNPSTQGILS*KPAQATYQVQG Trigger: GCCTTGAACTTGATATGTAGCCTGGGCTGGCTTCAAACTCAAAATCCCCTGGGTGCTAGGATTGCATGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 72 bp | TGGGGTAGAGCATGCAATCCTAGCACCCAGGGGATTTaGAGTTTGAAGCCAGCCCAGGCTACATATCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WGRACNPSTQGI*SLKPAQATYQV Trigger: AACTTGATATGTAGCCTGGGCTGGCTTCAAACTCAAAATCCCCTGGGTGCTAGGATTGCATGCTCTACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTGGGCCCACCACACTTTaGATGATGGCTGTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKGKERHLSGFSHHLIKPGPTTL*MMAVFG Trigger: ACCGAAGACAGCCATCATGCAAAGTGTGGTGGGCCC...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGAGAGTTGAAGCCAGAGTaGTATTGTGGCTGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KAGGGKIAQWFALPKDQGELKPE*YCGCRN Trigger: ATTTCTACAGCCACAATAGCACTCTGGCTTCAACTC...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTAGCCTGGCACAAAGGTaGCATCTCCTCCCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKGKERHLSGFSHHLIKPSLAQR*HLLPVF Trigger: GAAGACTGGGAGGAGATGGCACCTTTGTGCCAGGCT...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGCTCTAGCTAATTTGTTTGAGTCAGTCTCTTTCTCCCTGTTTTGCTGCTGCTCCCGCAGTCTCTaGGCTTCAGCGAAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKALANLFESVSFSLFCCCSRSL*ASAKNW Trigger: CCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCA...GCAGCAAAACAGGGAGAAAGAGACTGACTCAAACAAATTAGCTAGAGCCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR CCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCAAGGAGTCTCAGGTCTTaGGAAGAGATGGTACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLSQVGTKRLHRQPVESRSLRS*EEMVRR Trigger: TCTGCGTACCATCTCTTCCCAAGACCTGAGACTCCT...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCAGTGAGTCCAAGTACTaGCCAGTCCCGCTACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSSKGKERHLSGFSSESKY*PVPLQP Trigger: TGGCTGTAGCGGGACTGGCCAGTACTTGGACTCACT...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 72 bp | TCCTGCCTGGCTTCAGGTTCCTGTGCTGTGCAATTCTaGATGGGAGCTTCTCCCTTTTGGTGTTTGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLASGSCAVQF*MGASPFWCLFV Trigger: AACAAACAAACACCAAAAGGGAGAAGCTCCCATCAAGAATTGCACAGCACAGGAACCTGAAGCCAGGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCGGTAACTGGCAAGGATaGAAAGGTAGGGCACGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSSKGKERHLSGFSGNWQG*KGRARS Trigger: GCTTCGTGCCCTACCTTTTCATCCTTGCCAGTTACC...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | GCATTTCTGTCTCAAGTGGGAACTAAAAGACTCCACAGGCAACCTGTGGAGTCAATAGGAAGGGAGACATaGTCCAAGTCTGAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFLSQVGTKRLHRQPVESIGRET*SKSEER Trigger: CCTTTCCTCAGACTTGGAGCATGTCTCCCTTCCTAT...TGACTCCACAGGTTGCCTGTGGAGTCTTTTAGTTCCCACTTGAGACAGAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTCCCCAAAGAACTCACTaGCACAGGCCAGGGCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLILVEFFLVASYTQIFPQRTH*HRPGLL Trigger: GAGTAGCCCTGGCCTGTGGCAGTGAGTTCTTTGGGG...AAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCTCCTCCCAGTCTTCTTaGCTGGAACTCCATCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLPSQLPFFICHLLSHVLSSQSS*LELHLR Trigger: TCTCAGATGGAGTTCCAGTCAAGAAGACTGGGAGGA...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTGGAACCAAAGCTATGTaGTGCACACTGGGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKGKERHLSGFSHHLIKPGTKAM*CTLGNV Trigger: GACATTGCCCAGTGTGCAGCACATAGCTTTGGTTCC...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR GCA 90 bp | AAGGACATTCTTGCTGAAGCAATAATACAAAACTATTTCGCAAGGCTAGGGGGTGCCAAGATCACCCGATaGACCCCATATACCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KDILAEAIIQNYFARLGGAKITR*TPYTCP Trigger: GGGACAGGTATATGGGGTGCATCGGGTGATCTTGGC...ACCCCCTAGCCTTGCGAAATAGTTTTGTATTATTGCTTCAGCAAGAATGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTTCTTGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCGAAGAGGCTGCTAATTaGAGCCAAGATCACCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SWFLSSSKGKERHLSGFSEEAAN*SQDHPM Trigger: CATCGGGTGATCTTGGCTGCAATTAGCAGCCTCTTC...GGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGTTGGCCTCTGACTCGTaGGTCTCGGGGTTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQLYSLPILNIDIYPIMVLASDS*VSGLAA Trigger: GGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAA...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCTGTGCCAAGGCTTTCTaGCACAAATCCAGACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLPSQLPFFICHLLSHVLCAKAF*HKSRQE Trigger: TTCCTGTCTGGATTTGTGTCAGAAAGCCTTGGCACA...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 72 bp | GTAAGACCGTCTTCTCCTCTCATAAGTTCTGTCCTTTaGTCGTGGTATTGCTTATCCCTTCCTCCCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VRPSSPLISSVL*SWYCLSLPPSQ Trigger: TTGTGAGGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGAAGACGGTCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCCCAGCTATCGCTCTTTaGTTCATAGGCTTCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLPSQLPFFICHLLSHVLPAIAL*FIGFKA Trigger: AGCTTTGAAGCCTATGAACCAAAGAGCGATAGCTGG...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| 3UTR CAA 72 bp | TGTGTGCTGAGTAGATGCCAAAAGGCTCTAGCTAATTaGTTTGAGTCAGTCTCTTTCTCCCTGTTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVLSRCQKALAN*FESVSFSLFCC Trigger: GCAGCAAAACAGGGAGAAAGAGACTGACTCAAACAAATTAGCTAGAGCCTTTTGGCATCTACTCAGCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170855.2 |
||
| 3UTR CAA 72 bp | CCATGTTCTCTCATCGTCTTGATCCCATCCTGGTTCTaGAGTTCATCCAAAGGGAAGGAAAGACATTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCSLIVLIPSWF*SSSKGKERHLS Trigger: ACTCAAATGTCTTTCCTTCCCTTTGGATGAACTCAAGAACCAGGATGGGATCAAGACGATGAGAGAACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGTCCCTCCATCTCTCTTaGCCTGGAACTTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQLYSLPILNIDIYPIMVSLHLS*PGTSAS Trigger: GGAAGCTGAAGTTCCAGGTCAAGAGAGATGGAGGGA...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGAAAGGGAAGGTTTCCTaGAACGAAGGGGCTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLYSLPILNIDIYPIMVKGKVS*NEGARW Trigger: CCACCTAGCCCCTTCGTTTCAGGAAACCTTCCCTTT...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGAGACAGGAAGAGCTCTaGTATTGCAGAGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLYSLPILNIDIYPIMVRQEEL*YCRAAW Trigger: CCAGGCTGCTCTGCAATACCAGAGCTCTTCCTGTCT...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGGAACAAGGTGGGAGATaGCGTAAGTACGGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQLYSLPILNIDIYPIMVEQGGR*RKYGGC Trigger: ACAGCCACCGTACTTACGCCATCTCCCACCTTGTTC...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | GCCACAGGCCAGGGCTACTCGGTGCACCCGCAGGCGGTAGCCCTCTaGCTCCAGCTCCAAGTCGCACCCGATGCCCTCTCGATACAGACG | + |
|
Preference number: 5 (lower is better) Translates to: ATGQGYSVHPQAVAL*LQLQVAPDALSIQT Trigger: CGTCTGTATCGAGAGGGCATCGGGTGCGACTTGGAGCTGGAGGCAGAGGGCTACCGCCTGCGGGTGCACCGAGTAGCCCTGGCCTGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | GGGACTCCCTCATCCCACTCAGAAGCATGGCCCCAAAGAACTCACTaGCACAGGCCAGGGCTACTCGGTGCACCCGCAGGCGGTAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTPSSHSEAWPQRTH*HRPGLLGAPAGGSP Trigger: AGGGCTACCGCCTGCGGGTGCACCGAGTAGCCCTGGCCTGTGGCAGTGAGTTCTTTGGGGCCATGCTTCTGAGTGGGATGAGGGAGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | TTAGGCTCGCAGCTCCGTGCCGAAAGCGCCCTGGGGCAGGCAAATTaGGCAGCCGGCACCACTCCACAGTTCGTACCAGACCCATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGSQLRAESALGQAN*AAGTTPQFVPDPCH Trigger: GTGGCATGGGTCTGGTACGAACTGTGGAGTGGTGCCGGCTGCCCAATTTGCCTGCCCCAGGGCGCTTTCGGCACGGAGCTGCGAGCCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | CCCAGTGTCCCCTACTCCACCTGCCACATACAACTTCCCACCCAGTaGCGCCATCACGTGGCTAGCCCGGGCAACTCCCATTGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVPYSTCHIQLPTQ*RHHVASPGNSHWAQ Trigger: CTGAGCCCAATGGGAGTTGCCCGGGCTAGCCACGTGATGGCGGCACTGGGTGGGAAGTTGTATGTGGCAGGTGGAGTAGGGGACACTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | TTCTGCTCCCGCAGTCTCTGCGCTTCAGCGAAGAACTGGCAGGGGTaGTCCACGCTGCACAGCATCTCAGGCTCCGCTGAGTCGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FCSRSLCASAKNWQG*STLHSISGSAESSL Trigger: CAGCGACGACTCAGCGGAGCCTGAGATGCTGTGCAGCGTGGAGCACCCCTGCCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | AGCAGCAGCTTCTGCTCCCGCAGTCTCTGCGCTTCAGCGAAGAACTaGCAGGGGTGCTCCACGCTGCACAGCATCTCAGGCTCCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSFCSRSLCASAKN*QGCSTLHSISGSAE Trigger: CTCAGCGGAGCCTGAGATGCTGTGCAGCGTGGAGCACCCCTGCCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCAGAAGCTGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | CCCGCAGGCGGTAGCCCTCTGCCTCCAGCTCCAAGTCGCACCCGATaGCCTCTCGATACAGACGCTCAATGCTGTGCAGATTCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAGGSPLPPAPSRTR*PLDTDAQCCADSPS Trigger: TGAGGGAGAATCTGCACAGCATTGAGCGTCTGTATCGAGAGGGCATCGGGTGCGACTTGGAGCTGGAGGCAGAGGGCTACCGCCTGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | CCCACCCAGTGCCGCCATCACGTGGCTAGCCCGGGCAACTCCCATTaGGCTCAGAAGCGTCCCAGGCCTCTTAAGTTTGGGGTCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTQCRHHVASPGNSH*AQKRPRPLKFGVIV Trigger: CACTATGACCCCAAACTTAAGAGGCCTGGGACGCTTCTGAGCCCAATGGGAGTTGCCCGGGCTAGCCACGTGATGGCGGCACTGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | ACAGACACCTCTTCATCCAGCAGCAGCTTCTGCTCCCGCAGTCTCTaGGCTTCAGCGAAGAACTGGCAGGGGTGCTCCACGCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDTSSSSSSFCSRSL*ASAKNWQGCSTLHS Trigger: GCTGTGCAGCGTGGAGCACCCCTGCCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCAGAAGCTGCTGCTGGATGAAGAGGTGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | CGGCCAAAGCGAACACATCGCAACAGTGCCTTGGCCTCTGACTCGTaGGTCTCGGGGTTGGCAGCCAGCCAACACCGTGCAGCTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPKRTHRNSALASDS*VSGLAASQHRAAEK Trigger: TTTCTCAGCTGCACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTGTTCGCTTTGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | GAGTCACCTTTGTGCCCTGGGACTCCCTCATCCCACTCAGAAGCATaGCCCCAAAGAACTCACTGCCACAGGCCAGGGCTACTCGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESPLCPGTPSSHSEA*PQRTHCHRPGLLGA Trigger: TGCACCGAGTAGCCCTGGCCTGTGGCAGTGAGTTCTTTGGGGCCATGCTTCTGAGTGGGATGAGGGAGTCCCAGGGCACAAAGGTGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS TCA 90 bp | CAGACCCATGCCACAGTGAAATGCCCGGGCCCACCACACTTTGCATaGTGGCTGTCTTCGGTCCATGTCAGGTCTAAGCCCATCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QTHATVKCPGPPHFA*WLSSVHVRSKPIPT Trigger: GGTGGGGATGGGCTTAGACCTGACATGGACCGAAGACAGCCATCATGCAAAGTGTGGTGGGCCCGGGCATTTCACTGTGGCATGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | GCAAATTGGGCAGCCGGCACCACTCCACAGTTCGTACCAGACCCATaGCACAGTGAAATGCCCGGGCCCACCACACTTTGCATGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ANWAAGTTPQFVPDP*HSEMPGPTTLCMMA Trigger: AGCCATCATGCAAAGTGTGGTGGGCCCGGGCATTTCACTGTGGCATGGGTCTGGTACGAACTGTGGAGTGGTGCCGGCTGCCCAATTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | CACATCGCAACAGTGCCTTGGCCTCTGACTCGTGGGTCTCGGGGTTaGCAGCCAGCCAACACCGTGCAGCTGAGAAAGCCTCAAACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HIATVPWPLTRGSRG*QPANTVQLRKPQTL Trigger: AAGAGTTTGAGGCTTTCTCAGCTGCACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 90 bp | CCACCAATCACCACCAGGGCTTGGTCAGGCTCCCTCCATCTCTCTTaGCCTGGAACTTCAGCTTCCACCATCAGCTGGTACAGCAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: PPITTRAWSGSLHLS*PGTSASTISWYSRS Trigger: CGATCTGCTGTACCAGCTGATGGTGGAAGCTGAAGTTCCAGGTCAAGAGAGATGGAGGGAGCCTGACCAAGCCCTGGTGGTGATTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATACGGGCCCACCACACTTaGCATGATGGCTGTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPAPKDLLFSSGLCRHQIRAHHT*HDGCLR Trigger: CCGAAGACAGCCATCATGCAAAGTGTGGTGGGCCCG...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | GCAGCCAGCCAACACCGTGCAGCTGAGAAAGCCTCAAACTCTTCTTaGACATGGAGTTCATCACTGTCCAGGAGCTCAGCCAGGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AASQHRAAEKASNSS*TWSSSLSRSSARQV Trigger: TACCTGCCTGGCTGAGCTCCTGGACAGTGATGAACTCCATGTGCAAGAAGAGTTTGAGGCTTTCTCAGCTGCACGGTGTTGGCTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | TCCAAGTCGCACCCGATGCCCTCTCGATACAGACGCTCAATGCTGTaGAGATTCTCCCTCAGCTCCTCTGCCTGGCTGAGCTTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKSHPMPSRYRRSML*RFSLSSSAWLSFFS Trigger: TGAAAAGAAGCTCAGCCAGGCAGAGGAGCTGAGGGAGAATCTGCACAGCATTGAGCGTCTGTATCGAGAGGGCATCGGGTGCGACTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS TCA 90 bp | AAAGCTAGGCAAAGGGCGGGGCAGAGGCTTTGTGCCAAGGCTTTCTaGCACAAATCCAGACAGGAAGAGCTCTGGTATTGCAGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KARQRAGQRLCAKAF*HKSRQEELWYCRAA Trigger: GGCTGCTCTGCAATACCAGAGCTCTTCCTGTCTGGATTTGTGTCAGAAAGCCTTGGCACAAAGCCTCTGCCCCGCCCTTTGCCTAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 90 bp | CAGAAGCGTCCCAGGCCTCTTAAGTTTGGGGTCATAGTGTATCAGTaGGTCCAAGTACTGGCCAGTCCCGCTACAGCCACCGCTGACATA | + |
|
Preference number: 5 (lower is better) Translates to: QKRPRPLKFGVIVYQ*VQVLASPATATADI Trigger: TATGTCAGCGGTGGCTGTAGCGGGACTGGCCAGTACTTGGACTCACTGATACACTATGACCCCAAACTTAAGAGGCCTGGGACGCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | CAGTGTAGGCAAAAGAAACGAGGAGTCTCAGGTCTTGGGAAGAGATaGTACGCAGAGTCACCTTTGTGCCCTGGGACTCCCTCATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QCRQKKRGVSGLGKR*YAESPLCPGTPSSH Trigger: GTGGGATGAGGGAGTCCCAGGGCACAAAGGTGACTCTGCGTACCATCTCTTCCCAAGACCTGAGACTCCTCGTTTCTTTTGCCTACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 90 bp | AGCCAACACCGTGCAGCTGAGAAAGCCTCAAACTCTTCTTGCACATaGAGTTCATCACTGTCCAGGAGCTCAGCCAGGCAGGTAACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQHRAAEKASNSSCT*SSSLSRSSARQVTG Trigger: GCCAGTTACCTGCCTGGCTGAGCTCCTGGACAGTGATGAACTCCATGTGCAAGAAGAGTTTGAGGCTTTCTCAGCTGCACGGTGTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 90 bp | AAGCTCCGAGCCTGGCACAAAGGTGCCATCTCCTCCCAGTCTTCTTaGCTGGAACTCCATCTGAGAGTTGAAGCCAGAGTGCTATTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLRAWHKGAISSQSS*LELHLRVEARVLLW Trigger: CCACAATAGCACTCTGGCTTCAACTCTCAGATGGAGTTCCAGTCAAGAAGACTGGGAGGAGATGGCACCTTTGTGCCAGGCTCGGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCTCGTGGGTCTCGGGGTaGGCAGCCAGCCAACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: KLPSQLPFFICHLLSHVLSWVSG*AASQHR Trigger: ACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGA...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS GCA 90 bp | TCGATACAGACGCTCAATGCTGTGCAGATTCTCCCTCAGCTCCTCTaGCTGGCTGAGCTTCTTTTCATTTCCCCTGGCTTTACCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIQTLNAVQILPQLL*LAELLFISPGFTKS Trigger: GGACTTGGTAAAGCCAGGGGAAATGAAAAGAAGCTCAGCCAGGCAGAGGAGCTGAGGGAGAATCTGCACAGCATTGAGCGTCTGTATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCCATCGCAACAGTGCCTaGGCCTCTGACTCGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLISSVLLSWYCLSLPPHRNSA*ASDSWV Trigger: GACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATG...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTGGAAGAGCTCTGGTATaGCAGAGCAGCCTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKGKERHLSGFSHHLIKPGRALV*QSSLGS Trigger: GCTGCCCAGGCTGCTCTGCAATACCAGAGCTCTTCC...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | AAACTTCCTTCCCAACTGCCTTTCTTTATCTGTCACCTTCTCAGCCATGTTCTCGGCGGGGCAGAGGCTTaGTGCCAAGGCTTTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KLPSQLPFFICHLLSHVLGGAEA*CQGFLT Trigger: TGTCAGAAAGCCTTGGCACAAAGCCTCTGCCCCGCC...GAGAACATGGCTGAGAAGGTGACAGATAAAGAAAGGCAGTTGGGAAGGAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCAATCACCACCAGGGCTaGGTCAGGCTCCCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLISSVLLSWYCLSLPPNHHQG*VRLPPS Trigger: AGATGGAGGGAGCCTGACCAAGCCCTGGTGGTGATT...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTCCCGGGCAACTCCCATaGGGCTCAGAAGCGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLILVEFFLVASYTQIFPGQLP*GSEASQ Trigger: CTGGGACGCTTCTGAGCCCAATGGGAGTTGCCCGGG...AAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGGGGGTGGAAAGATAGCTCAGTGGTTTGCTCTTCCCAAGGACCAGGGATCCAGCTATCGCTCTTaGGTTCATAGGCTTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAGGGKIAQWFALPKDQGSSYRS*VHRLQS Trigger: GCTTTGAAGCCTATGAACCAAAGAGCGATAGCTGGA...TCCCTGGTCCTTGGGAAGAGCAAACCACTGAGCTATCTTTCCACCCCCTGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGGGAAGGAAAGACATTTGAGTGGATTCTCCCACCATCTCATCAAACCTTCTCAGCTCGAGGCCTaGGCAGAGTCCCCAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SKGKERHLSGFSHHLIKPSQLEA*AESPGI Trigger: TATGCCTGGGGACTCTGCCAAGGCCTCGAGCTGAGA...AGGTTTGATGAGATGGTGGGAGAATCCACTCAAATGTCTTTCCTTCCCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGCTCCAAAGGATCTGCTGTTCTCTTCTGGCCTCTGCAGGCACCAGATAAGCCTCAAACTCTTCTaGCACATGGAGTTCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPAPKDLLFSSGLCRHQISLKLF*HMEFIT Trigger: AGTGATGAACTCCATGTGCAAGAAGAGTTTGAGGCT...TATCTGGTGCCTGCAGAGGCCAGAAGAGAACAGCAGATCCTTTGGAGCTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTCATAAGTTCTGTCCTTTTGTCGTGGTATTGCTTATCCCTTCCTCCCCTCCCTCCATCTCTCTaGACCTGGAACTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLISSVLLSWYCLSLPPLPPSL*TWNFSF Trigger: GAAGCTGAAGTTCCAGGTCAAGAGAGATGGAGGGAG...GGGAGGAAGGGATAAGCAATACCACGACAAAAGGACAGAACTTATGAGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTTAATCCTTGTGGAGTTCTTCCTGGTTGCCTCCTATACCCAAATATTTGAGGAGTCTCAGGTCTaGGGAAGAGATGGTACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLILVEFFLVASYTQIFEESQV*GRDGTQ Trigger: CTGCGTACCATCTCTTCCCAAGACCTGAGACTCCTC...AAATATTTGGGTATAGGAGGCAACCAGGAAGAACTCCACAAGGATTAAAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGTACGCAGAGTCACCTTaGTGCCCTGGGACTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQLYSLPILNIDIYPIMVYAESP*CPGTPS Trigger: TGAGGGAGTCCCAGGGCACAAAGGTGACTCTGCGTA...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGCTCCTCCCAGTCTTCTaGACTGGAACTCCATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FQLYSLPILNIDIYPIMVLLPVF*TGTPSE Trigger: CTCAGATGGAGTTCCAGTCAAGAAGACTGGGAGGAG...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAACTATATTCCTTGCCTATCTTAAACATAGACATTTACCCCATCATGGTGCCCAGCAGGTTTGTTTaGGTGCTGAGTAGGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: FQLYSLPILNIDIYPIMVPSRFV*VLSRNQ Trigger: TTGGTTCCTACTCAGCACCAAAACAAACCTGCTGGG...CACCATGATGGGGTAAATGTCTATGTTTAAGATAGGCAAGGAATATAGTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | CAGCTCCGTGCCGAAAGCGCCCTGGGGCAGGCAAATTaGGCAGCCGGCACCACTCCACAGTTCGTACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QLRAESALGQAN*AAGTTPQFVPD Trigger: GTCTGGTACGAACTGTGGAGTGGTGCCGGCTGCCCAATTTGCCTGCCCCAGGGCGCTTTCGGCACGGAGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 72 bp | GCAGCTCCGTGCCGAAAGCGCCCTGGGGCAGGCAAATaGGGCAGCCGGCACCACTCCACAGTTCGTACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AAPCRKRPGAGK*GSRHHSTVRTR Trigger: TCTGGTACGAACTGTGGAGTGGTGCCGGCTGCCCAATTTGCCTGCCCCAGGGCGCTTTCGGCACGGAGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 90 bp | GTTAGGCTCGCAGCTCCGTGCCGAAAGCGCCCTGGGGCAGGCAAATaGGGCAGCCGGCACCACTCCACAGTTCGTACCAGACCCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VRLAAPCRKRPGAGK*GSRHHSTVRTRPMP Trigger: TGGCATGGGTCTGGTACGAACTGTGGAGTGGTGCCGGCTGCCCAATTTGCCTGCCCCAGGGCGCTTTCGGCACGGAGCTGCGAGCCTAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | GCGCTTCAGCGAAGAACTGGCAGGGGTGCTCCACGCTaGACAGCATCTCAGGCTCCGCTGAGTCGTCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALQRRTGRGAPR*TASQAPLSRRC Trigger: ACAGCGACGACTCAGCGGAGCCTGAGATGCTGTGCAGCGTGGAGCACCCCTGCCAGTTCTTCGCTGAAGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CAA 90 bp | CACTGGGCAATGTCAAGATGCAGGCCGGCATCTCAGCTCGAGGCCTaGGCAGAGTCCCCAGGCATAGCCAGCGATCCAGACCAGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HWAMSRCRPASQLEA*AESPGIASDPDQGS Trigger: ACTGCCCTGGTCTGGATCGCTGGCTATGCCTGGGGACTCTGCCAAGGCCTCGAGCTGAGATGCCGGCCTGCATCTTGACATTGCCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | GCAGCCGGCACCACTCCACAGTTCGTACCAGACCCATaGCACAGTGAAATGCCCGGGCCCACCACACTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAGTTPQFVPDP*HSEMPGPTTLC Trigger: GCAAAGTGTGGTGGGCCCGGGCATTTCACTGTGGCATGGGTCTGGTACGAACTGTGGAGTGGTGCCGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | ACAGTGCCTTGGCCTCTGACTCGTGGGTCTCGGGGTTaGCAGCCAGCCAACACCGTGCAGCTGAGAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TVPWPLTRGSRG*QPANTVQLRKP Trigger: AGGCTTTCTCAGCTGCACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | CGAACACATCGCAACAGTGCCTTGGCCTCTGACTCGTaGGTCTCGGGGTTGGCAGCCAGCCAACACCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTHRNSALASDS*VSGLAASQHRA Trigger: TGCACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTGTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | TGCCGCCATCACGTGGCTAGCCCGGGCAACTCCCATTaGGCTCAGAAGCGTCCCAGGCCTCTTAAGTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRHHVASPGNSH*AQKRPRPLKFG Trigger: CCCAAACTTAAGAGGCCTGGGACGCTTCTGAGCCCAATGGGAGTTGCCCGGGCTAGCCACGTGATGGCGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | GCCACATACAACTTCCCACCCAGTGCCGCCATCACGTaGCTAGCCCGGGCAACTCCCATTGGGCTCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATYNFPPSAAIT*LARATPIGLRS Trigger: GCTTCTGAGCCCAATGGGAGTTGCCCGGGCTAGCCACGTGATGGCGGCACTGGGTGGGAAGTTGTATGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | TTCTGCTCCCGCAGTCTCTGCGCTTCAGCGAAGAACTaGCAGGGGTGCTCCACGCTGCACAGCATCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCSRSLCASAKN*QGCSTLHSISG Trigger: GCCTGAGATGCTGTGCAGCGTGGAGCACCCCTGCCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CAA 72 bp | AACAGTGCCTTGGCCTCTGACTCGTGGGTCTCGGGGTaGGCAGCCAGCCAACACCGTGCAGCTGAGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NSALASDSWVSG*AASQHRAAEKA Trigger: GGCTTTCTCAGCTGCACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 72 bp | GACATGCGGCCAAAGCGAACACATCGCAACAGTGCCTaGGCCTCTGACTCGTGGGTCTCGGGGTTGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DMRPKRTHRNSA*ASDSWVSGLAA Trigger: GGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTGTTCGCTTTGGCCGCATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | GGGGTGCTCCACGCTGCACAGCATCTCAGGCTCCGCTaGGTCGTCGCTGTCATCCTGCTTCTTCCCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GVLHAAQHLRLR*VVAVILLLPFL Trigger: GAGAAAGGGAAGAAGCAGGATGACAGCGACGACTCAGCGGAGCCTGAGATGCTGTGCAGCGTGGAGCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | TCTTCATCCAGCAGCAGCTTCTGCTCCCGCAGTCTCTaGGCTTCAGCGAAGAACTGGCAGGGGTGCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSFCSRSL*ASAKNWQGCST Trigger: CGTGGAGCACCCCTGCCAGTTCTTCGCTGAAGCGCAGAGACTGCGGGAGCAGAAGCTGCTGCTGGATGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | ACATGCGGCCAAAGCGAACACATCGCAACAGTGCCTTaGCCTCTGACTCGTGGGTCTCGGGGTTGGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TCGQSEHIATVP*PLTRGSRGWQP Trigger: TGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTGTTCGCTTTGGCCGCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 90 bp | TCTCTGGTAGACATGCGGCCAAAGCGAACACATCGCAACAGTGCCTaGGCCTCTGACTCGTGGGTCTCGGGGTTGGCAGCCAGCCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: SLVDMRPKRTHRNSA*ASDSWVSGLAASQH Trigger: GTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTGTTCGCTTTGGCCGCATGTCTACCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | GTCCAGGAGCTCAGCCAGGCAGGTAACTGGCAAGGATaGAAAGGTAGGGCACGAAGCCACAGCAGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VQELSQAGNWQG*KGRARSHSRQV Trigger: CACCTGCCTGCTGTGGCTTCGTGCCCTACCTTTTCATCCTTGCCAGTTACCTGCCTGGCTGAGCTCCTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | AGTCGCACCCGATGCCCTCTCGATACAGACGCTCAATaGTGTGCAGATTCTCCCTCAGCTCCTCTGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRTRCPLDTDAQ*CADSPSAPLPG Trigger: GCCAGGCAGAGGAGCTGAGGGAGAATCTGCACAGCATTGAGCGTCTGTATCGAGAGGGCATCGGGTGCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | GGTAGCCCTCTGCCTCCAGCTCCAAGTCGCACCCGATaGCCTCTCGATACAGACGCTCAATGCTGTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSPLPPAPSRTR*PLDTDAQCCAD Trigger: ATCTGCACAGCATTGAGCGTCTGTATCGAGAGGGCATCGGGTGCGACTTGGAGCTGGAGGCAGAGGGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170855.2 ENSMUST00000227271.2 |
||
| CDS CAA 90 bp | ACACATCGCAACAGTGCCTTGGCCTCTGACTCGTGGGTCTCGGGGTaGGCAGCCAGCCAACACCGTGCAGCTGAGAAAGCCTCAAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: THRNSALASDSWVSG*AASQHRAAEKASNS Trigger: AGAGTTTGAGGCTTTCTCAGCTGCACGGTGTTGGCTGGCTGCCAACCCCGAGACCCACGAGTCAGAGGCCAAGGCACTGTTGCGATGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 90 bp | CGAGGAGTCTCAGGTCTTGGGAAGAGATGGTACGCAGAGTCACCTTaGTGCCCTGGGACTCCCTCATCCCACTCAGAAGCATGGCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RGVSGLGKRWYAESP*CPGTPSSHSEAWPQ Trigger: TTGGGGCCATGCTTCTGAGTGGGATGAGGGAGTCCCAGGGCACAAAGGTGACTCTGCGTACCATCTCTTCCCAAGACCTGAGACTCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | GCCACAGTGAAATGCCCGGGCCCACCACACTTTGCATaGTGGCTGTCTTCGGTCCATGTCAGGTCTAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATVKCPGPPHFA*WLSSVHVRSKP Trigger: GGGCTTAGACCTGACATGGACCGAAGACAGCCATCATGCAAAGTGTGGTGGGCCCGGGCATTTCACTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | CACCACTCCACAGTTCGTACCAGACCCATGCCACAGTaGAATGCCCGGGCCCACCACACTTTGCATGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HHSTVRTRPMPQ*NARAHHTLHDG Trigger: GCCATCATGCAAAGTGTGGTGGGCCCGGGCATTTCACTGTGGCATGGGTCTGGTACGAACTGTGGAGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | CCAAAGCTATGTGCTGCACACTGGGCAATGTCAAGATaGAGGCCGGCATCTCAGCTCGAGGCCTTGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PKLCAAHWAMSR*RPASQLEALAE Trigger: CTCTGCCAAGGCCTCGAGCTGAGATGCCGGCCTGCATCTTGACATTGCCCAGTGTGCAGCACATAGCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS GCA 72 bp | ACCGCTCAGCAGCCTGCCTCGGAAGAGGCTGCTAATTaGAGCCAAGATCACCCGATGCACCCCATATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAQQPASEEAAN*SQDHPMHPIYL Trigger: CAGGTATATGGGGTGCATCGGGTGATCTTGGCTGCAATTAGCAGCCTCTTCCGAGGCAGGCTGCTGAGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | GGTCTCGGGGTTGGCAGCCAGCCAACACCGTGCAGCTaGGAAAGCCTCAAACTCTTCTTGCACATGGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLGVGSQPTPCS*ESLKLFLHMEF Trigger: GAACTCCATGTGCAAGAAGAGTTTGAGGCTTTCTCAGCTGCACGGTGTTGGCTGGCTGCCAACCCCGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | CCCAGGCCTCTTAAGTTTGGGGTCATAGTGTATCAGTaGGTCCAAGTACTGGCCAGTCCCGCTACAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PRPLKFGVIVYQ*VQVLASPATAT Trigger: GGTGGCTGTAGCGGGACTGGCCAGTACTTGGACTCACTGATACACTATGACCCCAAACTTAAGAGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | CAAAGGGCGGGGCAGAGGCTTTGTGCCAAGGCTTTCTaGCACAAATCCAGACAGGAAGAGCTCTGGTATTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRAGQRLCAKAF*HKSRQEELWYC Trigger: GCAATACCAGAGCTCTTCCTGTCTGGATTTGTGTCAGAAAGCCTTGGCACAAAGCCTCTGCCCCGCCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CCA 72 bp | TCCAGACAGGAAGAGCTCTGGTATTGCAGAGCAGCCTaGGCAGCTCTTAGCAATCCTGGCCATCTTTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SRQEELWYCRAA*AALSNPGHLSR Trigger: TCGAGAAAGATGGCCAGGATTGCTAAGAGCTGCCCAGGCTGCTCTGCAATACCAGAGCTCTTCCTGTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 72 bp | AGGGCAAGGATGCCAGCTGAGTCCAGCTATCGCTCTTaGGTTCATAGGCTTCAAAGCTTAGTAGGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RARMPAESSYRS*VHRLQSLVGPQ Trigger: CTGGGGACCTACTAAGCTTTGAAGCCTATGAACCAAAGAGCGATAGCTGGACTCAGCTGGCATCCTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS CAA 90 bp | TCGAACAACTCCAGTGTAGGCAAAAGAAACGAGGAGTCTCAGGTCTaGGGAAGAGATGGTACGCAGAGTCACCTTTGTGCCCTGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SNNSSVGKRNEESQV*GRDGTQSHLCALGL Trigger: GAGTCCCAGGGCACAAAGGTGACTCTGCGTACCATCTCTTCCCAAGACCTGAGACTCCTCGTTTCTTTTGCCTACACTGGAGTTGTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||
| CDS TCA 72 bp | CTCCCAGTCTTCTTGACTGGAACTCCATCTGAGAGTTaGAGCCAGAGTGCTATTGTGGCTGTAGAAATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPVFLTGTPSES*SQSAIVAVEIL Trigger: CAGGATTTCTACAGCCACAATAGCACTCTGGCTTCAACTCTCAGATGGAGTTCCAGTCAAGAAGACTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164415.2 ENSMUST00000227271.2 |
||