Pregenerated sensors for KLHL32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040387Ensembl transcript IDs: ENSMUST00000084781.6, ENSMUST00000108214.9, ENSMUST00000108218.10, ENSMUST00000140652.8, ENSMUST00000150920.8
Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGGTCACTCTTCAGCACCTCCTGAAGCAGGCAGTAGGGCAGCGTaGGGACATCCTCTGGGCGGCTCTTCAGGAGCTCCGAGAGATGCT | + |
|
Preference number: 1 (lower is better) Translates to: GGHSSAPPEAGSRAA*GHPLGGSSGAPRDA Trigger: AGCATCTCTCGGAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACGCTGCCCTACTGCCTGCTTCAGGAGGTGCTGAAGAGTGACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR GCA 90 bp | ATGCCCTGTGTCCAGATGTCAAGGTCTCATTCGGTCTCCTGTGGATaGTGGCTTATCAGACAGTGCCGATCCTGTGGTGAGGCACTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: MPCVQMSRSHSVSCG*WLIRQCRSCGEALA Trigger: TGCAAGTGCCTCACCACAGGATCGGCACTGTCTGATAAGCCAGCATCCACAGGAGACCGAATGAGACCTTGACATCTGGACACAGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR GCA 90 bp | AGCGTGAGGACATCCTCTGGGCGGCTCTTCAGGAGCTCCGAGAGATaGTTCACTAGGAAGTCAATCACTGCCTTCTCCAACAAAGTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: SVRTSSGRLFRSSER*FTRKSITAFSNKVR Trigger: CCTCACTTTGTTGGAGAAGGCAGTGATTGACTTCCTAGTGAAGCATCTCTCGGAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR CCA 90 bp | GCAACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTaGACACAGAGCTATACAGAACACATCCATCTGTGCACAGTACGT | + |
|
Preference number: 1 (lower is better) Translates to: ATHGLMQGQASPLPC*TQSYTEHIHLCTVR Trigger: ACGTACTGTGCACAGATGGATGTGTTCTGTATAGCTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CCA 90 bp | GGTCATTGCCTCCAAGCACATAAAGCTTCCTTTGGACAGCAGCCATaGAGTGGTAGACTCTTCTCTGTAGCATGGGGCTGCGACTTATCC | + |
|
Preference number: 1 (lower is better) Translates to: GHCLQAHKASFGQQP*SGRLFSVAWGCDLS Trigger: GGATAAGTCGCAGCCCCATGCTACAGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTGCTTGGAGGCAATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 90 bp | AGGTACATAGCCATTGTAACATCACAGTATAGGATAGGCAACACATaGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACA | + |
|
Preference number: 1 (lower is better) Translates to: RYIAIVTSQYRIGNT*ANARTGKPTALLDT Trigger: TGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTTGCCTATCCTATACTGTGATGTTACAATGGCTATGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR GCA 90 bp | ACATTGCCTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTaGAGGCTCTCGGTTCAGACTTATGTCAACGCCTTCCGTGGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: TLPLSTWKTSIRTAG*RLSVQTYVNAFRGA Trigger: GGCACCACGGAAGGCGTTGACATAAGTCTGAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAGGCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 90 bp | CTTGGTGACTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTaGCTCACCATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: LGDFVLSTQGLAVGL*LTIAQARLQLKFLL Trigger: TAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAGTCACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR GCA 90 bp | TCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATCGAATaGAGGCTATCAGGCTTGGTGATAAGCACCTTTCTCATCTCCCTG | + |
|
Preference number: 1 (lower is better) Translates to: SILTLFLYHMDPGIE*RLSGLVISTFLISL Trigger: CAGGGAGATGAGAAAGGTGCTTATCACCAAGCCTGATAGCCTGCATTCGATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 90 bp | CTTATCCACTTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCTaGTACTGTGCGGTGTTTGTCACCCCACCTGCCAGATCTGCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: LIHLFWLGSYTISLF*YCAVFVTPPARSAP Trigger: AGGAGCAGATCTGGCAGGTGGGGTGACAAACACCGCACAGTATCAGAACAGACTGATGGTATATGAACCTAACCAGAATAAGTGGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR GCA 90 bp | CTATATGACGCACGAGAATCCGGTCATTATTGTAATCCAGGTCATTaGCTCCAAGCACATAAAGCTTCCTTTGGACAGCAGCCATGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: LYDARESGHYCNPGH*LQAHKASFGQQPWS Trigger: ACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTGCTTGGAGGCAATGACCTGGATTACAATAATGACCGGATTCTCGTGCGTCATATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR TCA 90 bp | GAAACTGATGCCTGCTGTGTAAGGTTCCTTACTGACAGTGTCACATaGTCCCAGACAGCACTAACTAGGACAGGGGTACAAAGAATGTTT | + |
|
Preference number: 1 (lower is better) Translates to: ETDACCVRFLTDSVT*SQTALTRTGVQRMF Trigger: AAACATTCTTTGTACCCCTGTCCTAGTTAGTGCTGTCTGGGATCATGTGACACTGTCAGTAAGGAACCTTACACAGCAGGCATCAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR TCA 90 bp | TTTACTCCGATCACCTTGAATGAAATGTGGCACTTAAAGTGTATCTaGTGTCATCCCGCTGAACTTCTGCTGAGGAATGCTGCAGAATGG | + |
|
Preference number: 1 (lower is better) Translates to: FTPITLNEMWHLKCI*CHPAELLLRNAAEW Trigger: CCATTCTGCAGCATTCCTCAGCAGAAGTTCAGCGGGATGACATCAGATACACTTTAAGTGCCACATTTCATTCAAGGTGATCGGAGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR TCA 90 bp | TGCATGATGTTTAAGAGATGGGACACACATACCCAGGTAAGATCATaGGATGATGGCAGAGCTCTGAGGTTCCTAACACCTAGGTACATA | + |
|
Preference number: 1 (lower is better) Translates to: CMMFKRWDTHTQVRS*DDGRALRFLTPRYI Trigger: TATGTACCTAGGTGTTAGGAACCTCAGAGCTCTGCCATCATCTCATGATCTTACCTGGGTATGTGTGTCCCATCTCTTAAACATCATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CCA 90 bp | GGACCGTCTCAACACTCCTCGAAATTTATAAACTTGGAAATAAAATaGTTTGGTTACAGGACTCTAAAGATAGCAACACATTTTAGAATG | + |
|
Preference number: 1 (lower is better) Translates to: GPSQHSSKFINLEIK*FGYRTLKIATHFRM Trigger: CATTCTAAAATGTGTTGCTATCTTTAGAGTCCTGTAACCAAACCATTTTATTTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGACCGTCGGCACTTGCAGAGTCTaGAGGTTGGGGCATGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: AQDRCSAFPMLSDSHRTVGTCRV*RLGHVK Trigger: TTTCACATGCCCCAACCTGCAGACTCTGCAAGTGCC...GACGGTCCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACCCGCTGAACTTCTGCTaGGGAATGCTGCAGAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: QAGLELRNLQRPQVLTDDPLNFC*GMLQNG Trigger: ACCATTCTGCAGCATTCCTCAGCAGAAGTTCAGCGG...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGGCAGTGTAGGTCCGTAGAACACTTCCTCTTTGCCTTCTCTGCTCACATCGTGCCGATCCTGTGGTaGGGCACTTGCAGAGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KGQCRSVEHFLFAFSAHIVPILW*GTCRVC Trigger: GCAGACTCTGCAAGTGCCTCACCACAGGATCGGCAC...GATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCTACGGACCTACACTGCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGGGGCATGTGAAATACGGAGCCGGAAGGAAGCACGCCGCTATGCCGTTGGACCTCTTTGCCTTCTCTaGTCACATCCAATACCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VGACEIRSRKEARRYAVGPLCLL*SHPIPG Trigger: TCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGG...TCCAACGGCATAGCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGTCTGCAGGTTGGGGCATGTGAAATACGGAGCCGGAAGGAAGCACGCCGCAGAACACTTCCTCTTTaGCTTCTCTGCTCACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSLQVGACEIRSRKEARRRTLPL*LLCSHP Trigger: TGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCT...GCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAACCTGCAGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | AATACGGAGCCGGAAGGAAGCACGCCGCTATGCCGTTGGAAGCAAAGGGCAGTGCTCACATCCAATACCTaGATACAAGCCAGAGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: NTEPEGSTPLCRWKQRAVLTSNT*IQARGS Trigger: TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAG...CACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCCTTCCGGCTCCGTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCAGACAGCTCTTCCAACTaGGCTGCACCCCTAGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSDSSSN*AAPLVL Trigger: AAGGACTAGGGGTGCAGCTCAGTTGGAAGAGCTGTC...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACCTCCAAGTGCTGGAATaGTGGAGTGTCAGGCATGTA | + |
|
Preference number: 2 (lower is better) Translates to: QAGLELRNLQRPQVLTDDLQVLE*WSVRHV Trigger: TACATGCCTGACACTCCATCATTCCAGCACTTGGAG...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGTCCGTAGAACACTTCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATGTGCCGATCCTGTGGTaGGGCACTTGCAGAGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RSVEHFLFAFSAHIQYLDVPILW*GTCRVC Trigger: GCAGACTCTGCAAGTGCCTCACCACAGGATCGGCAC...ATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCTACGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGACCGTCGAGGAAACTGATGCCTaGTGTGTAAGGTTCCTTACT | + |
|
Preference number: 2 (lower is better) Translates to: AQDRCSAFPMLSDSHRTVEETDA*CVRFLT Trigger: AGTAAGGAACCTTACACAGCAGGCATCAGTTTCCTC...GACGGTCCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACAAGCCAGAGGCTCAGGAAGCACGCCGCTATaGCGTTGGAAGCAAAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSLPSLLTSNTWIQARGSGSTPL*RWKQRA Trigger: TGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCC...TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACGCCGCTATGCCGTTGGAAGCAAAGGGCAGTGTAGGTCCGTAGAACACTTCTTTGGACAGCAGCCATaGAGTGGTAGACTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ARRYAVGSKGQCRSVEHFFGQQP*SGRLFS Trigger: AGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAA...GAAGTGTTCTACGGACCTACACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACTCAGGTTGGCTTCTTTaGACTCTCTTGGTAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QAGLELRNLQRPQVLTDDSGWLL*TLLVAK Trigger: CTTGGCTACCAAGAGAGTTCAAAGAAGCCAACCTGA...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACAAGCCAGAGGCTCACCGCTGAACTTCTGCTaGGGAATGCTGCAGAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSLPSLLTSNTWIQARGSPLNFC*GMLQNG Trigger: ACCATTCTGCAGCATTCCTCAGCAGAAGTTCAGCGG...TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACAAGCCAGAGGCTCATCCAACAGCTGTAGGTaGCTGCCAGCTGCTAACACA | + |
|
Preference number: 2 (lower is better) Translates to: SSLPSLLTSNTWIQARGSSNSCR*LPAANT Trigger: TGTGTTAGCAGCTGGCAGTCACCTACAGCTGTTGGA...TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCCACTTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCTGATACTGTGCGGCAGTAGGGCAGCGTaGGGACATCCTCTGGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: YPLILVRFIYHQSVLILCGSRAA*GHPLGG Trigger: GCCGCCCAGAGGATGTCCTCACGCTGCCCTACTGCC...GCACAGTATCAGAACAGACTGATGGTATATGAACCTAACCAGAATAAGTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCTGCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGGAGGAAACTGATGCCTaGTGTGTAAGGTTCCTTACT | + |
|
Preference number: 2 (lower is better) Translates to: IPAQDRCSAFPMLSDSHREETDA*CVRFLT Trigger: AGTAAGGAACCTTACACAGCAGGCATCAGTTTCCTC...CCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTGCGACTTATCCACTTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCCCCACCTGCCAGATCTaGTCCTCACTCAGGGACGTC | + |
|
Preference number: 2 (lower is better) Translates to: GLRLIHLFWLGSYTISLFPTCQI*SSLRDV Trigger: GACGTCCCTGAGTGAGGAGCAGATCTGGCAGGTGGG...GAACAGACTGATGGTATATGAACCTAACCAGAATAAGTGGATAAGTCGCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATTGCCTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCCGTGAGGACATCCTCTaGGCGGCTCTTCAGGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: TLPLSTWKTSIRTAGCRLREDIL*AALQEL Trigger: GAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACG...GAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAGGCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR CAA 90 bp | GTGCTGAAGCAGATCAGGAAGGCAGGAAGGCACTGTCCTGACGGATaGATTATGTTCATCTCTGAAGGCTCATGGGCTGCTTTTAAACCG | + |
|
Preference number: 2 (lower is better) Translates to: VLKQIRKAGRHCPDG*IMFISEGSWAAFKP Trigger: CGGTTTAAAAGCAGCCCATGAGCCTTCAGAGATGAACATAATCAATCCGTCAGGACAGTGCCTTCCTGCCTTCCTGATCTGCTTCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGCTCCAAGTGCTGGAATaGTGGAGTGTCAGGCATGTA | + |
|
Preference number: 2 (lower is better) Translates to: HSSGQTPTQISLRHSNGRLQVLE*WSVRHV Trigger: TACATGCCTGACACTCCATCATTCCAGCACTTGGAG...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGAGAATCTGTCCAAACTaGAAAAAGTACCCCATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NTWANARTGKPTALLDTERICPN*KKYPMK Trigger: CTTCATGGGGTACTTTTTGCAGTTTGGACAGATTCT...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGAACTGTAAAACAGTATaGCTTGTTACACCAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: NTWANARTGKPTALLDTENCKTV*LVTPAP Trigger: TGGTGCTGGTGTAACAAGGCATACTGTTTTACAGTT...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CCA 90 bp | GCACGCCGCTATGCCGTTGGAAGCAAAGGGCAGTGTAGGTCCGTAGAACACTTCTATATTCTCCCATTATaGACAGCGACTCCAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: ARRYAVGSKGQCRSVEHFYILPL*TATPDS Trigger: TGAATCTGGAGTCGCTGTCCATAATGGGAGAATATA...GAAGTGTTCTACGGACCTACACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGTGTATGTTCCAAGAGTaGTTTCACTCCTTTAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: NTWANARTGKPTALLDTECMFQE*FHSFKQ Trigger: TTGTTTAAAGGAGTGAAAGCACTCTTGGAACATACA...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCCCTTCTCCAACAAAGTaGGGTGAAAGAGGTCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIPSPTK*GERGQQ Trigger: TTGCTGACCTCTTTCACCTCACTTTGTTGGAGAAGG...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCAAGAATCTGTCCAAACTaGAAAAAGTACCCCATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSRICPN*KKYPMK Trigger: CTTCATGGGGTACTTTTTGCAGTTTGGACAGATTCT...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | AAACGTCTATTAGAACTGCTGGCTGCAGGCTCTCGGTTCAGACTTATGTCAACGTCTGTAGCATGGGGCTaGGACTTATCCACTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: KRLLELLAAGSRFRLMSTSVAWG*DLSTYS Trigger: AGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGA...CGTTGACATAAGTCTGAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGCCTTTCTCATCTCCCTaGGCTTTTCTTGTTTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: HSSGQTPTQISLRHSNGRPFSSP*AFLVLK Trigger: CTTCAAAACAAGAAAAGCCCAGGGAGATGAGAAAGG...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTCAAAGGAAAGCTaGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCC | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVCRSKES*EESILTLFLYHMDP Trigger: GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTTTGACCTACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | CTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCTCGGTTCTGTAAGGTTCCTTACTaGCAGTGTCACATGATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LYQLGKRLLELLAAGSRFCKVPY*QCHMIP Trigger: TGGGATCATGTGACACTGTCAGTAAGGAACCTTACA...GAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCTCTGTAGCATGGGGCTaGGACTTATCCACTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: YWQWWRTLQVGKIDIAFISVAWG*DLSTYS Trigger: AGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGA...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGCATTTGCCAAATCCTCATGGCATTCTTTTTAGTAAATGTGGAAATGAGGGAAGCACGCCGCTATaGCGTTGGAAGCAAAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SEHLPNPHGILFSKCGNEGSTPL*RWKQRA Trigger: TGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCC...CTCATTTCCACATTTACTAAAAAGAATGCCATGAGGATTTGGCAAATGCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTATGTCAACGCCTTCCGTGGTGCCATGGTTAGTACAGGTAATGTTTTTAATGGCACTTGCAGAGTCTaGAGGTTGGGGCATGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TYVNAFRGAMVSTGNVFNGTCRV*RLGHVK Trigger: TTTCACATGCCCCAACCTGCAGACTCTGCAAGTGCC...ATTAAAAACATTACCTGTACTAACCATGGCACCACGGAAGGCGTTGACATAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACAAGCCAGAGGCTCATATATTCTCCCATTATaGACAGCGACTCCAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSLPSLLTSNTWIQARGSYILPL*TATPDS Trigger: TGAATCTGGAGTCGCTGTCCATAATGGGAGAATATA...TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCTTAATGCACTGCTTGTaGTGGAAATCCAGGCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: KESLEESILTLFLYHMDPLMHCL*WKSRHP Trigger: AGGGTGCCTGGATTTCCATCACAAGCAGTGCATTAA...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTGCGACTTATCCACTTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCGAGGAAACTGATGCCTaGTGTGTAAGGTTCCTTACT | + |
|
Preference number: 2 (lower is better) Translates to: GLRLIHLFWLGSYTISLFEETDA*CVRFLT Trigger: AGTAAGGAACCTTACACAGCAGGCATCAGTTTCCTC...GAACAGACTGATGGTATATGAACCTAACCAGAATAAGTGGATAAGTCGCAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTTTTCCGCTGAACTTCTGCTaGGGAATGCTGCAGAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: RRMALRCTTIKITHIVCFPLNFC*GMLQNG Trigger: ACCATTCTGCAGCATTCCTCAGCAGAAGTTCAGCGG...AAAACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTGCCTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCAGCCCTATAAAGTTCTaGAACAAGGTCAGAGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: TLPLSTWKTSIRTAGCRLSPIKF*NKVRVT Trigger: GGTTACTCTGACCTTGTTTCAGAACTTTATAGGGCT...GAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAGGCAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATGCAAAAAGTACCCCATaGAGACCATCAAGGAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDAKSTP*RPSRRN Trigger: ATTTCTCCTTGATGGTCTTCATGGGGTACTTTTTGC...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCAAAGTTCTGAGCATTTaGCAAATCCTCATGGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIKVLSI*QILMAF Trigger: GAATGCCATGAGGATTTGGCAAATGCTCAGAACTTT...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTATGTCTCAGATTACTCAATTTTTATTATCCTGTAGCTTCTACCAGACCTTTGCCATAAAATCTTCCTaGCTCAGCCTCCCTCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GMSQITQFLLSCSFYQTFAIKSS*LSLPPS Trigger: GGAGGGAGGGAGGCTGAGGCAGGAAGATTTTATGGC...AAAGGTCTGGTAGAAGCTACAGGATAATAAAAATTGAGTAATCTGAGACATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATAAAATGTATTGGCAGTaGTGGAGAACCCTCCAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDKMYWQ*WRTLQV Trigger: TACTTGGAGGGTTCTCCACCACTGCCAATACATTTT...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTTTTCCTTACACTCACTaGGTAGAGGACCCGAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: RKTRGRYRKCHSCNLLGIFPYTH*VEDPRT Trigger: TGTTCTCGGGTCCTCTACCCAGTGAGTGTAAGGAAA...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTTATGTCAACGCCTTCCGTGGTGCCATGGTTAGTACAGGTAATGTTTTTAATCTCACATCCAATACCTaGATACAAGCCAGAGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TYVNAFRGAMVSTGNVFNLTSNT*IQARGS Trigger: TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAG...ATTAAAAACATTACCTGTACTAACCATGGCACCACGGAAGGCGTTGACATAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCTATGACATAAGCAACTaGCTTAAGCAGCTGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIYDISN*LKQLRK Trigger: TTTTCTCAGCTGCTTAAGTCAGTTGCTTATGTCATA...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTTTTACAGCTGTAGGTGACTaGCAGCTGCTAACACATCCT | + |
|
Preference number: 2 (lower is better) Translates to: RRMALRCTTIKITHIVCFTAVGD*QLLTHP Trigger: AGGATGTGTTAGCAGCTGGCAGTCACCTACAGCTGT...AAAACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAGACCATCAAGGAGAAATTGGTAACTGACGCTGACTTTAGTGAATGGTTATTTCCTTACACTCACTaGGTAGAGGACCCGAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: MKTIKEKLVTDADFSEWLFPYTH*VEDPRT Trigger: TGTTCTCGGGTCCTCTACCCAGTGAGTGTAAGGAAA...TAACCATTCACTAAAGTCAGCGTCAGTTACCAATTTCTCCTTGATGGTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCAACTTTTGCAATAGCTaGAGGGACACTACTTATGCA | + |
|
Preference number: 2 (lower is better) Translates to: KESLEESILTLFLYHMDPNFCNS*RDTTYA Trigger: TGCATAAGTAGTGTCCCTTCAGCTATTGCAAAAGTT...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | CGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTTTTAGTGGGAGCACAGATTaGGAAGTTCCAACAGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RRMALRCTTIKITHIVCFSGSTD*EVPTAV Trigger: TACAGCTGTTGGAACTTCTCAATCTGTGCTCCCACT...AAAACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATAAGGGACACTACTTATaGACATTAGGTATGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDKGHYL*TLGMRK Trigger: TTTCCTCATACCTAATGTGCATAAGTAGTGTCCCTT...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGCATTTGCCAAATCCTCATGGCATTCTTTTTAGTAAATGTGGAAATGAGCCTCTTTGCCTTCTCTaGTCACATCCAATACCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SEHLPNPHGILFSKCGNEPLCLL*SHPIPG Trigger: TCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGG...CTCATTTCCACATTTACTAAAAAGAATGCCATGAGGATTTGGCAAATGCTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGTCAATGTTGTAAGAATCTATATGACGCACGAGAATCCGGTCATTATTGTAGAACACTTCCTCTTTaGCTTCTCTGCTCACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: QCQCCKNLYDARESGHYCRTLPL*LLCSHP Trigger: TGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCT...ACAATAATGACCGGATTCTCGTGCGTCATATAGATTCTTACAACATTGACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGCTGACTTTAGTGAATaGTTAGAAACGGATACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KESLEESILTLFLYHMDPADFSE*LETDTA Trigger: TGCTGTATCCGTTTCTAACCATTCACTAAAGTCAGC...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 90 bp | CAGACTCCCACAGGACCGTCTCAACACTCCTCGAAATTTATAAACTaGGAAATAAAATGGTTTGGTTACAGGACTCTAAAGATAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: QTPTGPSQHSSKFIN*EIKWFGYRTLKIAT Trigger: TGTTGCTATCTTTAGAGTCCTGTAACCAAACCATTTTATTTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCCTGTGGGAGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CAA 90 bp | TCACATCCAATACCTGGATACAAGCCAGAGGCTCATTTGTCCAAATaGAATATCCACCAACTAAATATATTCTCCCATTATGGACAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: SHPIPGYKPEAHLSK*NIHQLNIFSHYGQR Trigger: TCGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTAAGGAACTCATCTCTCTCTAAGTTCTATATCTTTTCTGCACTAAGGAAATCAGGTTGGCTTCTTTaGACTCTCTTGGTAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLRNSSLSKFYIFSALRKSGWLL*TLLVAK Trigger: CTTGGCTACCAAGAGAGTTCAAAGAAGCCAACCTGA...TTTCCTTAGTGCAGAAAAGATATAGAACTTAGAGAGAGATGAGTTCCTTAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTAAAGTTCTGAGCATTTaGCAAATCCTCATGGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: RKTRGRYRKCHSCNLLGIKVLSI*QILMAF Trigger: GAATGCCATGAGGATTTGGCAAATGCTCAGAACTTT...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTCTCAGATTACTCAATTTTTATTATCCTGTAGCTTCTACCAGACCTTTATCTCTGAAGGCTCATaGGCTGCTTTTAAACCGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GMSQITQFLLSCSFYQTFISEGS*AAFKPF Trigger: GAACGGTTTAAAAGCAGCCCATGAGCCTTCAGAGAT...AAAGGTCTGGTAGAAGCTACAGGATAATAAAAATTGAGTAATCTGAGACATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR TCA 90 bp | CTACATAGCCAACTGAAGACCACCCTAAACAAGAAGAAAACTAGTTTTTCGTTGTATGACATAAGCAACTaGCTTAAGCAGCTGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LHSQLKTTLNKKKTSFSLYDISN*LKQLRK Trigger: TTTTCTCAGCTGCTTAAGTCAGTTGCTTATGTCATA...CAACGAAAAACTAGTTTTCTTCTTGTTTAGGGTGGTCTTCAGTTGGCTATGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000150920.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTATGTCTCAGATTACTCAATTTTTATTATCCTGTAGCTTCTACCAGACCTTTAACTTTTGCAATAGCTaGAGGGACACTACTTATGCA | + |
|
Preference number: 2 (lower is better) Translates to: GMSQITQFLLSCSFYQTFNFCNS*RDTTYA Trigger: TGCATAAGTAGTGTCCCTTCAGCTATTGCAAAAGTT...AAAGGTCTGGTAGAAGCTACAGGATAATAAAAATTGAGTAATCTGAGACATACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 72 bp | TCTTCAGCACCTCCTGAAGCAGGCAGTAGGGCAGCGTaGGGACATCCTCTGGGCGGCTCTTCAGGAGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SSAPPEAGSRAA*GHPLGGSSGAP Trigger: CGGAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACGCTGCCCTACTGCCTGCTTCAGGAGGTGCTGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | CTGAAGCAGGCAGTAGGGCAGCGTGAGGACATCCTCTaGGCGGCTCTTCAGGAGCTCCGAGAGATGCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LKQAVGQREDIL*AALQELREMLH Trigger: GTGAAGCATCTCTCGGAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACGCTGCCCTACTGCCTGCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR TCA 72 bp | GGTGAGGCACTTGCAGAGTCTGCAGGTTGGGGCATGTaGAATACGGAGCCGGAAGGAAGCACGCCGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: GEALAESAGWGM*NTEPEGSTPLC Trigger: GCATAGCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAACCTGCAGACTCTGCAAGTGCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR TCA 72 bp | TGGATGCTGGCTTATCAGACAGTGCCGATCCTGTGGTaGGGCACTTGCAGAGTCTGCAGGTTGGGGCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: WMLAYQTVPILW*GTCRVCRLGHV Trigger: CACATGCCCCAACCTGCAGACTCTGCAAGTGCCTCACCACAGGATCGGCACTGTCTGATAAGCCAGCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | GGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTaGACACAGAGCTATACAGAACACATCCATCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLMQGQASPLPC*TQSYTEHIHLC Trigger: GCACAGATGGATGTGTTCTGTATAGCTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | GCACGCCGCTATGCCGTTGGAAGCAAAGGGCAGTGTAGGTCCGTAGAACACTTCCACATAAAGCTTCCTTaGGACAGCAGCCATGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARRYAVGSKGQCRSVEHFHIKLP*DSSHGV Trigger: CACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTG...GAAGTGTTCTACGGACCTACACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR GCA 72 bp | CATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTaGTGGACACAGAGCTATACAGAACACATCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGLMQGQASPLP*WTQSYTEHIHL Trigger: CAGATGGATGTGTTCTGTATAGCTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR GCA 72 bp | ACATCCTCTGGGCGGCTCTTCAGGAGCTCCGAGAGATaGTTCACTAGGAAGTCAATCACTGCCTTCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TSSGRLFRSSER*FTRKSITAFSN Trigger: GTTGGAGAAGGCAGTGATTGACTTCCTAGTGAAGCATCTCTCGGAGCTCCTGAAGAGCCGCCCAGAGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | CAGATGTCAAGGTCTCATTCGGTCTCCTGTGGATGCTaGCTTATCAGACAGTGCCGATCCTGTGGTGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QMSRSHSVSCGC*LIRQCRSCGEA Trigger: TGCCTCACCACAGGATCGGCACTGTCTGATAAGCCAGCATCCACAGGAGACCGAATGAGACCTTGACATCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | CTGTGTCCAGATGTCAAGGTCTCATTCGGTCTCCTGTaGATGCTGGCTTATCAGACAGTGCCGATCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LCPDVKVSFGLL*MLAYQTVPILW Trigger: CCACAGGATCGGCACTGTCTGATAAGCCAGCATCCACAGGAGACCGAATGAGACCTTGACATCTGGACACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTCTGCAGGTTGGGGCATGTGAAATACGGAGCCGGAAGGAAGCACGCCGCAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QSLQVGACEIRSRKEARRKPEAH*SKLNIH Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...GCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAACCTGCAGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | CTCCAAGCACATAAAGCTTCCTTTGGACAGCAGCCATaGAGTGGTAGACTCTTCTCTGTAGCATGGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQAHKASFGQQP*SGRLFSVAWGC Trigger: GCAGCCCCATGCTACAGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTGCTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACTTCAGGTTGGCTTCTTaGAACTCTCTTGGTAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QAGLELRNLQRPQVLTDDFRLAS*NSLGSQ Trigger: TTGGCTACCAAGAGAGTTCAAAGAAGCCAACCTGAA...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGACTCCCACAGGACCGTCTCAACACTCCTCGAAATTTATAAACTTGGAACCTGTGGTGAGGCACTaGCAGAGTCTGCAGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQTPTGPSQHSSKFINLEPVVRH*QSLQVG Trigger: CCCAACCTGCAGACTCTGCAAGTGCCTCACCACAGG...TTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCCTGTGGGAGTCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR GCA 72 bp | ATAAAATCTTCCTGCCTCAGCCTCCCTCCCTCCAAGTaGTGGAATGATGGAGTGTCAGGCATGTACCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: IKSSCLSLPPSK*WNDGVSGMYHH Trigger: GTGATGGTACATGCCTGACACTCCATCATTCCAGCACTTGGAGGGAGGGAGGCTGAGGCAGGAAGATTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CCA 72 bp | GCCATTGTAACATCACAGTATAGGATAGGCAACACATaGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AIVTSQYRIGNT*ANARTGKPTAL Trigger: CAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTTGCCTATCCTATACTGTGATGTTACAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGTGCAGGCTATCAGGCTaGGTGATAAGCACCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HSSGQTPTQISLRHSNGRCRLSG*VISTFL Trigger: GAGAAAGGTGCTTATCACCAAGCCTGATAGCCTGCA...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 72 bp | GCCTGCTGTGTAAGGTTCCTTACTGACAGTGTCACATaGTCCCAGACAGCACTAACTAGGACAGGGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: ACCVRFLTDSVT*SQTALTRTGVQ Trigger: TTGTACCCCTGTCCTAGTTAGTGCTGTCTGGGATCATGTGACACTGTCAGTAAGGAACCTTACACAGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR TCA 72 bp | AGATCAGGAAGGCAGGAAGGCACTGTCCTGACGGATTaGTTATGTTCATCTCTGAAGGCTCATGGGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSGRQEGTVLTD*LCSSLKAHGLL Trigger: AAGCAGCCCATGAGCCTTCAGAGATGAACATAATCAATCCGTCAGGACAGTGCCTTCCTGCCTTCCTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR GCA 72 bp | ACTCTCTTCTTGTACCACATGGATCCCGGGATCGAATaGAGGCTATCAGGCTTGGTGATAAGCACCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLFLYHMDPGIE*RLSGLVISTFL Trigger: GAGAAAGGTGCTTATCACCAAGCCTGATAGCCTGCATTCGATCCCGGGATCCATGTGGTACAAGAAGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | CACACCAAATACGATTCCACAGACTTTTTCACTGCAGATGAGTTTGAGAAAGCGGGGGAGGGTCATAAGTaGGAGGCCAGTTTAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: HTKYDSTDFFTADEFEKAGEGHK*EASLAT Trigger: TGTAGCTAAACTGGCCTCCAACTTATGACCCTCCCC...CGCTTTCTCAAACTCATCTGCAGTGAAAAAGTCTGTGGAATCGTATTTGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 72 bp | GCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTaGCTGACGACTACCTATTGTGTAAGGACAGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: ASNSEICRGHKS*LTTTYCVRTVI Trigger: AATCACTGTCCTTACACAATAGGTAGTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 72 bp | CAGCGACTCCAGATTCATTCTGGCCAGTCAACAAGTTaGAATTACAGCGCGTCCACTGATCAGTGTCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: QRLQIHSGQSTS*NYSASTDQCQC Trigger: ACATTGACACTGATCAGTGGACGCGCTGTAATTTCAACTTGTTGACTGGCCAGAATGAATCTGGAGTCGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR GCA 72 bp | GCACGAGAATCCGGTCATTATTGTAATCCAGGTCATTaGCTCCAAGCACATAAAGCTTCCTTTGGACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARESGHYCNPGH*LQAHKASFGQQ Trigger: CTGCTGTCCAAAGGAAGCTTTATGTGCTTGGAGGCAATGACCTGGATTACAATAATGACCGGATTCTCGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | CCTGACGGATTGATTATGTTCATCTCTGAAGGCTCATaGGCTGCTTTTAAACCGTTCTCGCCACTTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PDGLIMFISEGS*AAFKPFSPLTY Trigger: GTAGGTAAGTGGCGAGAACGGTTTAAAAGCAGCCCATGAGCCTTCAGAGATGAACATAATCAATCCGTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | AACACTTCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACAAGCCAGATGCAGAATGGTAAGCTaGAAAAGACACGCTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NTSSLPSLLTSNTWIQARCRMVS*KRHADA Trigger: AGCATCAGCGTGTCTTTTCAAGCTTACCATTCTGCA...TCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACATAGCCAACTGAAGACCACCCTAAACAAGAAGAAAACTAGTTTTTCGTTGGATACTGTGCGGTGTTaGTCACCCCACCTGCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LHSQLKTTLNKKKTSFSLDTVRC*SPHLPD Trigger: ATCTGGCAGGTGGGGTGACAAACACCGCACAGTATC...CAACGAAAAACTAGTTTTCTTCTTGTTTAGGGTGGTCTTCAGTTGGCTATGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR TCA 72 bp | TTTAAGAGATGGGACACACATACCCAGGTAAGATCATaGGATGATGGCAGAGCTCTGAGGTTCCTAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: FKRWDTHTQVRS*DDGRALRFLTP Trigger: AGGTGTTAGGAACCTCAGAGCTCTGCCATCATCTCATGATCTTACCTGGGTATGTGTGTCCCATCTCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 72 bp | TCACTAGGAAGTCAATCACTGCCTTCTCCAACAAAGTaGGGTGAAAGAGGTCAGCAAGTCTGTACAGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLGSQSLPSPTK*GERGQQVCTDP Trigger: TGGATCTGTACAGACTTGCTGACCTCTTTCACCTCACTTTGTTGGAGAAGGCAGTGATTGACTTCCTAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR TCA 72 bp | TTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCTaGTACTGTGCGGTGTTTGTCACCCCACCTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFWLGSYTISLF*YCAVFVTPPAR Trigger: TCTGGCAGGTGGGGTGACAAACACCGCACAGTATCAGAACAGACTGATGGTATATGAACCTAACCAGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| 3UTR GCA 72 bp | TTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTaGAGGCTCTCGGTTCAGACTTATGTCAACGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSTWKTSIRTAG*RLSVQTYVNAF Trigger: GAAGGCGTTGACATAAGTCTGAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR TCA 72 bp | GAACACATCCATCTGTGCACAGTACGTGGTCCTTCATaGGTGATGACTTGCTGCTTTGTGTATTTATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EHIHLCTVRGPS*VMTCCFVYLFP Trigger: GGGAAATAAATACACAAAGCAGCAAGTCATCACTCATGAAGGACCACGTACTGTGCACAGATGGATGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATCACTGTCCTGACGGATaGATTATGTTCATCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDHCPDG*IMFISE Trigger: TTCAGAGATGAACATAATCAATCCGTCAGGACAGTG...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTAACCTTTCCTTCCCTTaGGTAAAGGAGTGTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: RKTRGRYRKCHSCNLLGINLSFP*VKECDT Trigger: AGTGTCACACTCCTTTACCAAAGGGAAGGAAAGGTT...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGCATTTGCCAAATCCTCATGGCATTCTTTTTAGTAAATGTGGAAATGAGCACATAAAGCTTCCTTaGGACAGCAGCCATGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SEHLPNPHGILFSKCGNEHIKLP*DSSHGV Trigger: CACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTG...CTCATTTCCACATTTACTAAAAAGAATGCCATGAGGATTTGGCAAATGCTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR GCA 72 bp | AGACTTCTCAAGCATATTGGGATTGCAAACATGAGCTaGTATAGCCAGTTTAATGCACTGCTTGTGATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLLKHIGIANMS*YSQFNALLVME Trigger: TTCCATCACAAGCAGTGCATTAAACTGGCTATAGCAGCTCATGTTTGCAATCCCAATATGCTTGAGAAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | CGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTTTTTGCAGAATGGTAAGCTaGAAAAGACACGCTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: RRMALRCTTIKITHIVCFCRMVS*KRHADA Trigger: AGCATCAGCGTGTCTTTTCAAGCTTACCATTCTGCA...AAAACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGACCATCAAGGAGAAATTGGTAACTGACGCTGACTTTAGTGAATGGTTACACTGTCCTGACGGATaGATTATGTTCATCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: MKTIKEKLVTDADFSEWLHCPDG*IMFISE Trigger: TTCAGAGATGAACATAATCAATCCGTCAGGACAGTG...TAACCATTCACTAAAGTCAGCGTCAGTTACCAATTTCTCCTTGATGGTCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR GCA 72 bp | ACAAAGAATGTTTTAAAGAGCCACAAAACTATCACGTaGCGTAGGATGGCACTAAGGTGCACCACAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKNVLKSHKTIT*RRMALRCTTIK Trigger: TTTTATTGTGGTGCACCTTAGTGCCATCCTACGGCACGTGATAGTTTTGTGGCTCTTTAAAACATTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CCA 72 bp | ATTGAATATCCACCAACTAAATATATTCTCCCATTATaGACAGCGACTCCAGATTCATTCTGGCCAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: IEYPPTKYILPL*TATPDSFWPVN Trigger: GTTGACTGGCCAGAATGAATCTGGAGTCGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTATGTCTCAGATTACTCAATTTTTATTATCCTGTAGCTTCTACCAGACCTTTTGCAGAATGGTAAGCTaGAAAAGACACGCTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GMSQITQFLLSCSFYQTFCRMVS*KRHADA Trigger: AGCATCAGCGTGTCTTTTCAAGCTTACCATTCTGCA...AAAGGTCTGGTAGAAGCTACAGGATAATAAAAATTGAGTAATCTGAGACATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTAAGGAACTCATCTCTCTCTAAGTTCTATATCTTTTCTGCACTAAGGAAATGCAGAATGGTAAGCTaGAAAAGACACGCTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLRNSSLSKFYIFSALRKCRMVS*KRHADA Trigger: AGCATCAGCGTGTCTTTTCAAGCTTACCATTCTGCA...TTTCCTTAGTGCAGAAAAGATATAGAACTTAGAGAGAGATGAGTTCCTTAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTATGTCTCAGATTACTCAATTTTTATTATCCTGTAGCTTCTACCAGACCTTTAAGCTGTCTGTGTCTTaGCTAGCTTTTCCTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GMSQITQFLLSCSFYQTFKLSVS*LAFPLT Trigger: TGTGAGAGGAAAAGCTAGCAAAGACACAGACAGCTT...AAAGGTCTGGTAGAAGCTACAGGATAATAAAAATTGAGTAATCTGAGACATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTAAGGAACTCATCTCTCTCTAAGTTCTATATCTTTTCTGCACTAAGGAAAACCATCAAGGAGAAATaGGTAACTGACGCTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLRNSSLSKFYIFSALRKTIKEK*VTDADF Trigger: AAAGTCAGCGTCAGTTACCAATTTCTCCTTGATGGT...TTTCCTTAGTGCAGAAAAGATATAGAACTTAGAGAGAGATGAGTTCCTTAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR GCA 72 bp | CCAATTAACCAGAGAGCATTTATATGTGTAGAACAGTaGTTTCGGTATCATACAGCAATGCGTAAACTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PINQRAFICVEQ*FRYHTAMRKLS Trigger: ACTAAGTTTACGCATTGCTGTATGATACCGAAAGCACTGTTCTACACATATAAATGCTCTCTGGTTAATTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR TCA 72 bp | ATTTCTCAGACTACATCCCAGCCATTAAGTGAGAGATaGCTGCATTTGACTTGTTTTCTAAGCATTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ISQTTSQPLSER*LHLTCFLSILE Trigger: TTCTAAAATGCTTAGAAAACAAGTCAAATGCAGTCATCTCTCACTTAATGGCTGGGATGTAGTCTGAGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGGTGCCGATCCTGTGGTaGGGCACTTGCAGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTWANARTGKPTALLDTEVPILW*GTCRVC Trigger: GCAGACTCTGCAAGTGCCTCACCACAGGATCGGCAC...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | GTTGGGGCATGTGAAATACGGAGCCGGAAGGAAGCACGCCGCTATGCCGTTGGAGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGACEIRSRKEARRYAVGANSRA*FKPRLV Trigger: GACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGC...TCCAACGGCATAGCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS-3UTR CCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGCGTGAGGACATCCTCTaGGCGGCTCTTCAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTWANARTGKPTALLDTEREDIL*AALQEL Trigger: GAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACG...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGGCTAGGACCGCCTTGTaGGCGTGGAATTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTWANARTGKPTALLDTEARTAL*AWNFCS Trigger: GGAACAGAAATTCCACGCTCACAAGGCGGTCCTAGC...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGGCAGTAGGGCAGCGTaGGGACATCCTCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPGSRAA*GHPLGG Trigger: GCCGCCCAGAGGATGTCCTCACGCTGCCCTACTGCC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACACAGGAAGTCCCCCATaGCTGCCACACAGTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELRNLQRPQVLTDDTGSPP*LPHSDG Trigger: GCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGT...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGGCCACATATCCAGCGTaGCACGAGAGGGATCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTWANARTGKPTALLDTEATYPA*HERDLS Trigger: TGACAGATCCCTCTCGTGTCACGCTGGATATGTGGC...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACGCTAGGACCGCCTTGTaGGCGTGGAATTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELRNLQRPQVLTDDARTAL*AWNFCS Trigger: GGAACAGAAATTCCACGCTCACAAGGCGGTCCTAGC...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCTGCAGGTTGGGGCATGTGAAATACGGAGCCGGAAGGAAGCACGCCGCAAGAGTGAACAGACTTaGAGAAGAGGCATGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLQVGACEIRSRKEARRKSEQT*RRGMAC Trigger: ACAGGCCATGCCTCTTCTGCAAGTCTGTTCACTCTT...GCGGCGTGCTTCCTTCCGGCTCCGTATTTCACATGCCCCAACCTGCAGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| CDS-3UTR CCA 90 bp | TACGGAGCCGGAAGGAAGCACGCCGCTATGCCGTTGGAAGCAAAGGGCAGTGTACTTGCAGAAGAGGCATaGCCTGTCCTGTATATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YGAGRKHAAMPLEAKGSVLAEEA*PVLYMR Trigger: TCGCATATACAGGACAGGCCATGCCTCTTCTGCAAG...TACACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCCTTCCGGCTCCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCAGTTGCCGTCTCACTTaGCTGCACCAGGGGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVSCRLT*LHQGVG Trigger: TCCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACT...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGTGCCGATCCTGTGGTaGGGCACTTGCAGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPVPILW*GTCRVC Trigger: GCAGACTCTGCAAGTGCCTCACCACAGGATCGGCAC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGGAGGAGCAAGAAGAGTaGACAGACTTGCAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPAQDRCSAFPMLSDSHREEQEE*TDLQKR Trigger: CCTCTTCTGCAAGTCTGTTCACTCTTCTTGCTCCTC...CCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGCAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCCCCGGAAGTAGTCACTaGAGGCTGCTAGGACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPPGSSH*RLLGPP Trigger: AGGCGGTCCTAGCAGCCTGCAGTGACTACTTCCGGG...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVANSRA*FKPRLV Trigger: GACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGC...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCAGTTGACAAGGGCAGTTaGCGTCTCACTTGCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSVDKGS*RLTCLH Trigger: GTGCAGGCAAGTGAGACGGCAACTGCCCTTGTCAAC...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCGGAAGCACGCCGCTATaGCGTTGGAAGCAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVGSTPL*RWKQRA Trigger: TGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCC...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTCCTTCCCACCGGCATaGGAGCCAGCTCACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPSFPPA*EPAHSS Trigger: ACTGGAGTGAGCTGGCTCCCATGCCGGTGGGAAGGA...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGACCGTCACTGTAGGTAGAACTTaGCACAGTTCATTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQDRCSAFPMLSDSHRTVTVGRT*HSSFLP Trigger: GGGCAGAAATGAACTGTGCCAAGTTCTACCTACAGT...GACGGTCCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGCTCACATCCAATACCTaGATACAAGCCAGAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTWANARTGKPTALLDTELTSNT*IQARGS Trigger: TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAG...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGATCCTGGATCACTCCTaGCTCCAACAAAATCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTWANARTGKPTALLDTEILDHS*LQQNLS Trigger: GGACAGATTTTGTTGGAGCCAGGAGTGATCCAGGAT...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGGCAATGGCGGCTATaGGGGCATTCTCCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPWQWRL*GHSPGP Trigger: TGGACCAGGAGAATGCCCTCATAGCCGCCATTGCCA...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTATGACTGCCACACAGTaGTGGCTCCTTCCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCMTATQ*WLLPTG Trigger: GCCGGTGGGAAGGAGCCATCACTGTGTGGCAGTCAT...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCACAGGAAGTCCCCCATaGCTGCCACACAGTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPTGSPP*LPHSDG Trigger: GCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGT...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | GTCCGTAGAACACTTCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRRTLPLCLLCSHPIPGYANSRA*FKPRLV Trigger: GACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGC...GTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCTACGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCGTTGACAAGGGCAGTTaGCGTCTCACTTGCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVVDKGS*RLTCLH Trigger: GTGCAGGCAAGTGAGACGGCAACTGCCCTTGTCAAC...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | GAATTTGTCCAAGTTTCGGGATCTCTGGCATTCCTGCTCAGGATAGGTGTAGCGGAAGTCCCCCATGACTaGCACACAGTGATGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EFVQVSGSLAFLLRIGVAEVPHD*HTVMAP Trigger: AGGAGCCATCACTGTGTGGCAGTCATGGGGGACTTC...CGCTACACCTATCCTGAGCAGGAATGCCAGAGATCCCGAAACTTGGACAAATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCATGGGTGCTATCTCTaGCCAGGAATTACTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVHGCYL*PGITAG Trigger: CCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AAACGTCTATTAGAACTGCTGGCTGCAGGCTCTCGGTTCAGACTTATGTCAACGGGAAGCACGCCGCTATaGCGTTGGAAGCAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRLLELLAAGSRFRLMSTGSTPL*RWKQRA Trigger: TGCCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCC...CGTTGACATAAGTCTGAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCAGGCACTTGCAGAGTCTaGAGGTTGGGGCATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSGTCRV*RLGHVK Trigger: TTTCACATGCCCCAACCTGCAGACTCTGCAAGTGCC...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | GCACGCCGCTATGCCGTTGGAAGCAAAGGGCAGTGTAGGTCCGTAGAACACTTCAATCTGTCCTGTATATaGGAACTCCAGAGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARRYAVGSKGQCRSVEHFNLSCI*ELQSLL Trigger: AAGCAGGCTCTGGAGTTCGCATATACAGGACAGATT...GAAGTGTTCTACGGACCTACACTGCCCTTTGCTTCCAACGGCATAGCGGCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140652.8 |
||
| CDS-3UTR CCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTCGTGAGGACATCCTCTaGGCGGCTCTTCAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCREDIL*AALQEL Trigger: GAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACG...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCCCGGCAGTTTTTCATaGGTGCTATCTCTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVPGSFS*VLSLPR Trigger: CCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGCTAGGACCGCCTTGTaGGCGTGGAATTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPARTAL*AWNFCS Trigger: GGAACAGAAATTCCACGCTCACAAGGCGGTCCTAGC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR TCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTATTCCAGGGCCTCGTTaGCAAGGGCAGTTGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCIPGPR*QGQLPS Trigger: AGACGGCAACTGCCCTTGTCAACGAGGCCCTGGAAT...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | ACATTGCCTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCGTGCCGATCCTGTGGTaGGGCACTTGCAGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLSTWKTSIRTAGCRLVPILW*GTCRVC Trigger: GCAGACTCTGCAAGTGCCTCACCACAGGATCGGCAC...GAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAGGCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIANSRA*FKPRLV Trigger: GACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGC...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGCTAGCTGCCAGATCTaGTCCTCACTCAGGGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCASCQI*SSLRDV Trigger: GACGTCCCTGAGTGAGGAGCAGATCTGGCAGCTAGC...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGAAGTCCCCCATGACTaGCACACAGTGATGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPEVPHD*HTVMAP Trigger: AGGAGCCATCACTGTGTGGCAGTCATGGGGGACTTC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCCATGGGTGCTATCTCTaGCCAGGAATTACTGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPHGCYL*PGITAG Trigger: CCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATG...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACTCTGTAGCATGGGGCTaGGACTTATCCACTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELRNLQRPQVLTDDSVAWG*DLSTYS Trigger: AGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGA...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGAATCTGTCCTGTATATaGGAACTCCAGAGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPAQDRCSAFPMLSDSHRNLSCI*ELQSLL Trigger: AAGCAGGCTCTGGAGTTCGCATATACAGGACAGATT...CCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| 3UTR CAA 72 bp | CAGATCAGGAAGGCAGGAAGGCACTGTCCTGACGGATaGATTATGTTCATCTCTGAAGGCTCATGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIRKAGRHCPDG*IMFISEGSWAA Trigger: AGCAGCCCATGAGCCTTCAGAGATGAACATAATCAATCCGTCAGGACAGTGCCTTCCTGCCTTCCTGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCTTATCCTTTCTATCACTTCCTGTTCTTTAACCCAATTAACCAGAGAGGGCAGTAGGGCAGCGTaGGGACATCCTCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLILSITSCSLTQLTREGSRAA*GHPLGG Trigger: GCCGCCCAGAGGATGTCCTCACGCTGCCCTACTGCC...CTCTCTGGTTAATTGGGTTAAAGAACAGGAAGTGATAGAAAGGATAAGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCATGACTGCCACACAGTaGTGGCTCCTTCCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KESLEESILTLFLYHMDPMTATQ*WLLPTG Trigger: GCCGGTGGGAAGGAGCCATCACTGTGTGGCAGTCAT...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGCCACATATCCAGCGTaGCACGAGAGGGATCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCATYPA*HERDLS Trigger: TGACAGATCCCTCTCGTGTCACGCTGGATATGTGGC...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTCCAAAGCGGATGTACTaGAGGAGCTCGTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCPKRMY*RSSSRC Trigger: GCATCTGGACGAGCTCCTGCAGTACATCCGCTTTGG...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCCCAAAGCGGATGTACTaGAGGAGCTCGTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIPKRMY*RSSSRC Trigger: GCATCTGGACGAGCTCCTGCAGTACATCCGCTTTGG...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCAGGCTGTGCATAGATaGTTTGGTGGTATTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVQAVHR*FGGIPG Trigger: CCCTGGAATACCACCAAAGCATCTATGCACAGCCTG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | GAATTTGTCCAAGTTTCGGGATCTCTGGCATTCCTGCTCAGGATAGGTGTAGCGTTCCACTTCTCCTCCTaGTACAAACAGGAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EFVQVSGSLAFLLRIGVAFHFSS*YKQEVP Trigger: GGGGACTTCCTGTTTGTAGCAGGAGGAGAAGTGGAA...CGCTACACCTATCCTGAGCAGGAATGCCAGAGATCCCGAAACTTGGACAAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGGCACTTGCAGAGTCTaGAGGTTGGGGCATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPGTCRV*RLGHVK Trigger: TTTCACATGCCCCAACCTGCAGACTCTGCAAGTGCC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTGCCTTCTCTGCTCACATCCAATACCTGGATACAAGCCAGAGGCTCAACAGCTGTAGGTGACTaGCAGCTGCTAACACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSLLTSNTWIQARGSTAVGD*QLLTHP Trigger: AGGATGTGTTAGCAGCTGGCAGTCACCTACAGCTGT...TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140652.8 |
||
| CDS-3UTR CCA 90 bp | CACACCAAATACGATTCCACAGACTTTTTCACTGCAGATGAGTTTGAGAAAGCGCGTGAGGACATCCTCTaGGCGGCTCTTCAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKYDSTDFFTADEFEKAREDIL*AALQEL Trigger: GAGCTCCTGAAGAGCCGCCCAGAGGATGTCCTCACG...CGCTTTCTCAAACTCATCTGCAGTGAAAAAGTCTGTGGAATCGTATTTGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTCACATGTCCGGCCACTaGCATGTTCCACTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCHMSGH*HVPLLL Trigger: GAGGAGAAGTGGAACATGCCAGTGGCCGGACATGTG...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTCCCGGCAGTTTTTCATaGGTGCTATCTCTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCPGSFS*VLSLPR Trigger: CCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGG...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTTGACTGACGACTCCATTTGTTCTTCTTaGGGCAGTATCGTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELRNLQRPQVLTDDSICSS*GSIVQL Trigger: CAGTTGAACGATACTGCCCCAAGAAGAACAAATGGA...GTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | ATCCAGGTCATTGCCTCCAAGCACATAAAGCTTCCTTaGGACAGCAGCCATGGAGTGGTAGACTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQVIASKHIKLP*DSSHGVVDSSL Trigger: CAGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTGCTTGGAGGCAATGACCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCCACCATACAAAGACTaGACATTGCCCGGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVPPYKD*TLPGSS Trigger: ACTACTTCCGGGCAATGTTCAGTCTTTGTATGGTGG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCCTTCTCCAACAAAGTaGGGTGAAAGAGGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVPSPTK*GERGQQ Trigger: TTGCTGACCTCTTTCACCTCACTTTGTTGGAGAAGG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACACCAAATACGATTCCACAGACTTTTTCACTGCAGATGAGTTTGAGAAAGCGATTCCAGGGCCTCGTTaGCAAGGGCAGTTGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTKYDSTDFFTADEFEKAIPGPR*QGQLPS Trigger: AGACGGCAACTGCCCTTGTCAACGAGGCCCTGGAAT...CGCTTTCTCAAACTCATCTGCAGTGAAAAAGTCTGTGGAATCGTATTTGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCAGTAACGAAGTTCCTTaGCTTTGCAGACCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVSNEVP*LCRPHA Trigger: AGCGTGAGGTCTGCAAAGTCAAGGAACTTCGTTACT...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | ACTTATGTCAACGCCTTCCGTGGTGCCATGGTTAGTACAGGTAATGTTTTTAATCCCGGAAGTAGTCACTaGAGGCTGCTAGGACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYVNAFRGAMVSTGNVFNPGSSH*RLLGPP Trigger: AGGCGGTCCTAGCAGCCTGCAGTGACTACTTCCGGG...ATTAAAAACATTACCTGTACTAACCATGGCACCACGGAAGGCGTTGACATAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTTCCACTTCTCCTCCTaGTACAAACAGGAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPFHFSS*YKQEVP Trigger: GGGGACTTCCTGTTTGTAGCAGGAGGAGAAGTGGAA...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGGCACAGTTCATTTCTaGCCCCTACTGCATAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPGTVHF*PLLHRG Trigger: ACCTCTATGCAGTAGGGGGCAGAAATGAACTGTGCC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTCTGTTCTGATACTGTaGGGTGTTTGTCACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPSVLIL*GVCHPT Trigger: GGTGGGGTGACAAACACCGCACAGTATCAGAACAGA...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCCTCTTTGCCTTCTCTaGTCACATCCAATACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVPLCLL*SHPIPG Trigger: TCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGCCTCTTTGCCTTCTCTaGTCACATCCAATACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSGQTPTQISLRHSNGRPLCLL*SHPIPG Trigger: TCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGG...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTTCCTTCCCACCGGCATaGGAGCCAGCTCACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGISFPPA*EPAHSS Trigger: ACTGGAGTGAGCTGGCTCCCATGCCGGTGGGAAGGA...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGTATATTCTCCCATTATaGACAGCGACTCCAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPAQDRCSAFPMLSDSHRYILPL*TATPDS Trigger: TGAATCTGGAGTCGCTGTCCATAATGGGAGAATATA...CCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGCAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCTCACATCCAATACCTaGATACAAGCCAGAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVLTSNT*IQARGS Trigger: TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | GGCCTCGAACTCAGAAATCTGCAGAGGCCACAAGTCTaGACTGACGACTACCTATTGTGTAAGGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLELRNLQRPQV*TDDYLLCKDSD Trigger: ATCACTGTCCTTACACAATAGGTAGTCGTCAGTCAAGACTTGTGGCCTCTGCAGATTTCTGAGTTCGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGTTTGTCACCCCACCTaGTATCCAAAGAAGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPVCHPT*YPKKTI Trigger: GATGGTCTTCTTTGGATATCAGGTGGGGTGACAAAC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATTCCAACAGCTGTAGGTaGCTGCCAGCTGCTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDSNSCR*LPAANT Trigger: TGTGTTAGCAGCTGGCAGTCACCTACAGCTGTTGGA...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CCACTGATCAGTGTCAATGTTGTAAGAATCTATATGACGCACGAGAATCCGGTCTCCAACAGCTGTAGGTaGCTGCCAGCTGCTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: PLISVNVVRIYMTHENPVSNSCR*LPAANT Trigger: TGTGTTAGCAGCTGGCAGTCACCTACAGCTGTTGGA...GACCGGATTCTCGTGCGTCATATAGATTCTTACAACATTGACACTGATCAGTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140652.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCATATTTAGTTCCTGGATaGGATAGTGGGAGCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSYLVPG*DSGSTD Trigger: ATCTGTGCTCCCACTATCTCATCCAGGAACTAAATA...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTGCTAGCTGCCAGATCTaGTCCTCACTCAGGGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGIASCQI*SSLRDV Trigger: GACGTCCCTGAGTGAGGAGCAGATCTGGCAGCTAGC...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CTACATAGCCAACTGAAGACCACCCTAAACAAGAAGAAAACTAGTTTTTCGTTGAGTTGCCGTCTCACTTaGCTGCACCAGGGGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSQLKTTLNKKKTSFSLSCRLT*LHQGVG Trigger: TCCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACT...CAACGAAAAACTAGTTTTCTTCTTGTTTAGGGTGGTCTTCAGTTGGCTATGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCAATTTCTGCCCCCTACTaGATAGAGGTATTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSISAPY*IEVFIH Trigger: ATGGATGAATACCTCTATGCAGTAGGGGGCAGAAAT...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGTCTGTAGCATGGGGCTaGGACTTATCCACTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSGQTPTQISLRHSNGRSVAWG*DLSTYS Trigger: AGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGA...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAGACTCCCACAGGACCGTCTCAACACTCCTCGAAATTTATAAACTTGGAAGGCACTTGCAGAGTCTaGAGGTTGGGGCATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQTPTGPSQHSSKFINLEGTCRV*RLGHVK Trigger: TTTCACATGCCCCAACCTGCAGACTCTGCAAGTGCC...TTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCCTGTGGGAGTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGATAGGGCAACCGTGTaGAGTGTATCCACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPDRATV*SVSTSI Trigger: AATGGATGTGGATACACTCCACACGGTTGCCCTATC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCAAGAGGTATTCATCCATaGCACCCAGCACAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSRGIHP*HPAQNV Trigger: AACATTTTGTGCTGGGTGCCATGGATGAATACCTCT...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCATCCTGGATCACTCCTaGCTCCAACAAAATCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPILDHS*LQQNLS Trigger: GGACAGATTTTGTTGGAGCCAGGAGTGATCCAGGAT...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGACCATCAAGGAGAAATTGGTAACTGACGCTGACTTTAGTGAATGGTTAGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MKTIKEKLVTDADFSEWLANSRA*FKPRLV Trigger: GACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGC...TAACCATTCACTAAAGTCAGCGTCAGTTACCAATTTCTCCTTGATGGTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTTTCCTGTCCTGTATATaGGAACTCCAGAGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCFLSCI*ELQSLL Trigger: AAGCAGGCTCTGGAGTTCGCATATACAGGACAGGAA...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084781.6 |
||
| CDS-3UTR GCA 90 bp | AAACGTCTATTAGAACTGCTGGCTGCAGGCTCTCGGTTCAGACTTATGTCAACGAGAACACTTCCTCTTTaGCTTCTCTGCTCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRLLELLAAGSRFRLMSTRTLPL*LLCSHP Trigger: TGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCT...CGTTGACATAAGTCTGAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATTTATTCTGCCAGATCTaGTCCTCACTCAGGGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDLFCQI*SSLRDV Trigger: GACGTCCCTGAGTGAGGAGCAGATCTGGCAGAATAA...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108214.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCACATCCAATACCTGGATACAAGCCAGAGGCTCATTTGTCCAAATTGAATGGCCTGTCCTGTATATaGGAACTCCAGAGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSHPIPGYKPEAHLSKLNGLSCI*ELQSLL Trigger: AAGCAGGCTCTGGAGTTCGCATATACAGGACAGGCC...ATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCAGAGGTATTCATCCATaGCACCCAGCACAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVRGIHP*HPAQNV Trigger: AACATTTTGTGCTGGGTGCCATGGATGAATACCTCT...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTTTTGGACAGCAGCCATaGAGTGGTAGACTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCFGQQP*SGRLFS Trigger: AGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAA...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCATCCTGGATCACTCCTaGCTCCAACAAAATCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIILDHS*LQQNLS Trigger: GGACAGATTTTGTTGGAGCCAGGAGTGATCCAGGAT...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| 3UTR CAA 72 bp | GAGAAAGCGATCCAATCGTACAACCTTTCCTTCCCTTaGGTAAAGGAGTGTGACACTTCTGAGGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKAIQSYNLSFP*VKECDTSEAAL Trigger: AAGAGCAGCCTCAGAAGTGTCACACTCCTTTACCAAAGGGAAGGAAAGGTTGTACGATTGGATCGCTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | TATCCACTTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCTGATACTGTGCGCTAGGACCGCCTTGTaGGCGTGGAATTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPLILVRFIYHQSVLILCARTAL*AWNFCS Trigger: GGAACAGAAATTCCACGCTCACAAGGCGGTCCTAGC...GCACAGTATCAGAACAGACTGATGGTATATGAACCTAACCAGAATAAGTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140652.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGACTCCCACAGGACCGTCTCAACACTCCTCGAAATTTATAAACTTGGAACCTTCTCCAACAAAGTaGGGTGAAAGAGGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQTPTGPSQHSSKFINLEPSPTK*GERGQQ Trigger: TTGCTGACCTCTTTCACCTCACTTTGTTGGAGAAGG...TTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCCTGTGGGAGTCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | TCTCAGACTCCCACAGGACCGTCTCAACACTCCTCGAAATTTATAAACTTGGAAAGTGGGAGCACAGATTaGGAAGTTCCAACAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQTPTGPSQHSSKFINLESGSTD*EVPTAV Trigger: TACAGCTGTTGGAACTTCTCAATCTGTGCTCCCACT...TTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCCTGTGGGAGTCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTTCACGTCGCAGAGAATaGCATCACTTCTTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCSRRRE*HHFFAD Trigger: ATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGA...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | CTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCTCGGTTCTCACGTCGCAGAGAATaGCATCACTTCTTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYQLGKRLLELLAAGSRFSRRRE*HHFFAD Trigger: ATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGA...GAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGCAGTTTTTCATGGGTaGTATCTCTGCCCAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCAVFHG*YLCPGI Trigger: AATTCCTGGGCAGAGATAGCACCCATGAAAAACTGC...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCATTTCTGCCCCCTACTaGATAGAGGTATTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPISAPY*IEVFIH Trigger: ATGGATGAATACCTCTATGCAGTAGGGGGCAGAAAT...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTTCTGTAGCATGGGGCTaGGACTTATCCACTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCSVAWG*DLSTYS Trigger: AGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGA...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTAGAACACTTCCTCTTTaGCTTCTCTGCTCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCRTLPL*LLCSHP Trigger: TGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCT...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCAATCTGTCCTGTATATaGGAACTCCAGAGCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YWQWWRTLQVGKIDIAFINLSCI*ELQSLL Trigger: AAGCAGGCTCTGGAGTTCGCATATACAGGACAGATT...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCACAGCTGTAGGTGACTaGCAGCTGCTAACACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KESLEESILTLFLYHMDPTAVGD*QLLTHP Trigger: AGGATGTGTTAGCAGCTGGCAGTCACCTACAGCTGT...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTACTGTAGGTAGAACTTaGCACAGTTCATTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCTVGRT*HSSFLP Trigger: GGGCAGAAATGAACTGTGCCAAGTTCTACCTACAGT...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCACTCCAGATTCATTCTaGCCAGTCAACAAGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRPVRHDREALRMSMPCVTPDSF*PVNKLK Trigger: TTTCAACTTGTTGACTGGCCAGAATGAATCTGGAGT...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGACTCCAGATTCATTCTaGCCAGTCAACAAGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSGQTPTQISLRHSNGRTPDSF*PVNKLK Trigger: TTTCAACTTGTTGACTGGCCAGAATGAATCTGGAGT...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | ACATTGCCTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCCTCACATCCAATACCTaGATACAAGCCAGAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLPLSTWKTSIRTAGCRLLTSNT*IQARGS Trigger: TGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGAG...GAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAGGCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CTCTTAAGGAACTCATCTCTCTCTAAGTTCTATATCTTTTCTGCACTAAGGAAATGGCAATGGCGGCTATaGGGGCATTCTCCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRNSSLSKFYIFSALRKWQWRL*GHSPGP Trigger: TGGACCAGGAGAATGCCCTCATAGCCGCCATTGCCA...TTTCCTTAGTGCAGAAAAGATATAGAACTTAGAGAGAGATGAGTTCCTTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGTTTGTCACCCCACCTaGTATCCAAAGAAGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: KESLEESILTLFLYHMDPVCHPT*YPKKTI Trigger: GATGGTCTTCTTTGGATATCAGGTGGGGTGACAAAC...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAGACTCCCACAGGACCGTCTCAACACTCCTCGAAATTTATAAACTTGGAAGCAGTTTTTCATGGGTaGTATCTCTGCCCAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQTPTGPSQHSSKFINLEAVFHG*YLCPGI Trigger: AATTCCTGGGCAGAGATAGCACCCATGAAAAACTGC...TTCCAAGTTTATAAATTTCGAGGAGTGTTGAGACGGTCCTGTGGGAGTCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGATCTGTCAAAGGACTaGACAAAAGTCCATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPDLSKD*TKVHLF Trigger: GAACAAATGGACTTTTGTGCAGTCCTTTGACAGATC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTTCTGTTCTGATACTGTaGGGTGTTTGTCACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGISVLIL*GVCHPT Trigger: GGTGGGGTGACAAACACCGCACAGTATCAGAACAGA...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTTCCATTTGTTCTTCTTaGGGCAGTATCGTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NFRPVRHDREALRMSMPCSICSS*GSIVQL Trigger: CAGTTGAACGATACTGCCCCAAGAAGAACAAATGGA...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCTTTGGACAGCAGCCATaGAGTGGTAGACTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KESLEESILTLFLYHMDPFGQQP*SGRLFS Trigger: AGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAA...GGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTATATTCTCCCATTATaGACAGCGACTCCAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNFRPVRHDREALRMSMPYILPL*TATPDS Trigger: TGAATCTGGAGTCGCTGTCCATAATGGGAGAATATA...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | ACTTATGTCAACGCCTTCCGTGGTGCCATGGTTAGTACAGGTAATGTTTTTAATAGTGGGAGCACAGATTaGGAAGTTCCAACAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TYVNAFRGAMVSTGNVFNSGSTD*EVPTAV Trigger: TACAGCTGTTGGAACTTCTCAATCTGTGCTCCCACT...ATTAAAAACATTACCTGTACTAACCATGGCACCACGGAAGGCGTTGACATAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTAGTGGGAGCACAGATTaGGAAGTTCCAACAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGISGSTD*EVPTAV Trigger: TACAGCTGTTGGAACTTCTCAATCTGTGCTCCCACT...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TGCCGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTCCTCTTTGCCTTCTCTaGTCACATCCAATACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRRMALRCTTIKITHIVCPLCLL*SHPIPG Trigger: TCCAGGTATTGGATGTGAGCAGAGAAGGCAAAGAGG...ACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCTCGGTTCACTCCAGATTCATTCTaGCCAGTCAACAAGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYQLGKRLLELLAAGSRFTPDSF*PVNKLK Trigger: TTTCAACTTGTTGACTGGCCAGAATGAATCTGGAGT...GAACCGAGAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTAGGTCAAAGGAAAGCTaGGAAGAGTCAATTCTAACTCTCTTCTTGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCRSKES*EESILTLFLYH Trigger: GTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTTTCCTTTGACCTACACACACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | TCTGTGCACAGTACGTGGTCCTTCATGAGTGATGACTaGCTGCTTTGTGTATTTATTTCCCCTCACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVHSTWSFMSDD*LLCVFISPHSF Trigger: AAAACTGTGAGGGGAAATAAATACACAAAGCAGCAAGTCATCACTCATGAAGGACCACGTACTGTGCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | CTCTTAAGGAACTCATCTCTCTCTAAGTTCTATATCTTTTCTGCACTAAGGAAATCCAACAGCTGTAGGTaGCTGCCAGCTGCTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LLRNSSLSKFYIFSALRKSNSCR*LPAANT Trigger: TGTGTTAGCAGCTGGCAGTCACCTACAGCTGTTGGA...TTTCCTTAGTGCAGAAAAGATATAGAACTTAGAGAGAGATGAGTTCCTTAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTAGAACACTTCCTCTTTaGCTTCTCTGCTCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGIRTLPL*LLCSHP Trigger: TGGATGTGAGCAGAGAAGGCAAAGAGGAAGTGTTCT...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TGCCGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTCTTATCCACTTATTCTaGCAGATCTGCTCCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CRRMALRCTTIKITHIVCLIHLF*QICSSL Trigger: GAGTGAGGAGCAGATCTGGCAGAATAAGTGGATAAG...ACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108214.9 |
||
| CDS-3UTR CCA 90 bp | CTACATAGCCAACTGAAGACCACCCTAAACAAGAAGAAAACTAGTTTTTCGTTGGATAGGGCAACCGTGTaGAGTGTATCCACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LHSQLKTTLNKKKTSFSLDRATV*SVSTSI Trigger: AATGGATGTGGATACACTCCACACGGTTGCCCTATC...CAACGAAAAACTAGTTTTCTTCTTGTTTAGGGTGGTCTTCAGTTGGCTATGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | AATACGATTCCACAGACTTTTTCACTGCAGATGAGTTaGAGAAAGCGATCCAATCGTACAACCTTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTIPQTFSLQMS*RKRSNRTTFPS Trigger: GGAAGGAAAGGTTGTACGATTGGATCGCTTTCTCAAACTCATCTGCAGTGAAAAAGTCTGTGGAATCGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCATTTGCCAAATCCTCATGGCATTCTTTTTAGTAAATGTGGAAATGAGCCTTCTCCAACAAAGTaGGGTGAAAGAGGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SEHLPNPHGILFSKCGNEPSPTK*GERGQQ Trigger: TTGCTGACCTCTTTCACCTCACTTTGTTGGAGAAGG...CTCATTTCCACATTTACTAAAAAGAATGCCATGAGGATTTGGCAAATGCTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAGGAACTCATCTCTCTCTAAGTTCTATATCTTTTCTGCACTAAGGAAACAGGCTGTGCATAGATaGTTTGGTGGTATTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNSSLSKFYIFSALRKQAVHR*FGGIPG Trigger: CCCTGGAATACCACCAAAGCATCTATGCACAGCCTG...TTTCCTTAGTGCAGAAAAGATATAGAACTTAGAGAGAGATGAGTTCCTTAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | CGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTTTTTTTGGACAGCAGCCATaGAGTGGTAGACTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRMALRCTTIKITHIVCFFGQQP*SGRLFS Trigger: AGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAA...AAAACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACG 41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | GGTATGTCTCAGATTACTCAATTTTTATTATCCTGTAGCTTCTACCAGACCTTTAGTAACGAAGTTCCTTaGCTTTGCAGACCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMSQITQFLLSCSFYQTFSNEVP*LCRPHA Trigger: AGCGTGAGGTCTGCAAAGTCAAGGAACTTCGTTACT...AAAGGTCTGGTAGAAGCTACAGGATAATAAAAATTGAGTAATCTGAGACATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGACCATCAAGGAGAAATTGGTAACTGACGCTGACTTTAGTGAATGGTTATATTTAGTTCCTGGATaGGATAGTGGGAGCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MKTIKEKLVTDADFSEWLYLVPG*DSGSTD Trigger: ATCTGTGCTCCCACTATCTCATCCAGGAACTAAATA...TAACCATTCACTAAAGTCAGCGTCAGTTACCAATTTCTCCTTGATGGTCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCATTTGCCAAATCCTCATGGCATTCTTTTTAGTAAATGTGGAAATGAGTCACGTCGCAGAGAATaGCATCACTTCTTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SEHLPNPHGILFSKCGNESRRRE*HHFFAD Trigger: ATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGA...CTCATTTCCACATTTACTAAAAAGAATGCCATGAGGATTTGGCAAATGCTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTGATCTGTCAAAGGACTaGACAAAAGTCCATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGIDLSKD*TKVHLF Trigger: GAACAAATGGACTTTTGTGCAGTCCTTTGACAGATC...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACAAGAGGAAGGTACAGGAAGTGCCACAGTTGTAATTTACTTGGCATTTATATTCTCCCATTATaGACAGCGACTCCAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKTRGRYRKCHSCNLLGIYILPL*TATPDS Trigger: TGAATCTGGAGTCGCTGTCCATAATGGGAGAATATA...AATGCCAAGTAAATTACAACTGTGGCACTTCCTGTACCTTCCTCTTGTTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | TGCAAAAAGTACCCCATGAAGACCATCAAGGAGAAATaGGTAACTGACGCTGACTTTAGTGAATGGTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKKYPMKTIKEK*VTDADFSEWLE Trigger: TTCTAACCATTCACTAAAGTCAGCGTCAGTTACCAATTTCTCCTTGATGGTCTTCATGGGGTACTTTTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| 3UTR CAA 72 bp | TCACATCCAATACCTGGATACAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCACCAACTAAATATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SHPIPGYKPEAH*SKLNIHQLNIF Trigger: GAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTATTGGATGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| 3UTR CAA 72 bp | ATACCTGGATACAAGCCAGAGGCTCATTTGTCCAAATaGAATATCCACCAACTAAATATATTCTCCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: IPGYKPEAHLSK*NIHQLNIFSHY Trigger: ATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS CCA 90 bp | GGGGGTCATAGCGACAGGCTGTCCTCACGGCACATGTCCGGCCACTaGCATGTTCCACTTCTCCTCCTGCTACAAACAGGAAGTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGHSDRLSSRHMSGH*HVPLLLLLQTGSPP Trigger: TGGGGGACTTCCTGTTTGTAGCAGGAGGAGAAGTGGAACATGCCAGTGGCCGGACATGTGCCGTGAGGACAGCCTGTCGCTATGACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS TCA 90 bp | ACACAGGCTGTGCATAGATGCTTTGGTGGTATTCCAGGGCCTCGTTaGCAAGGGCAGTTGCCGTCTCACTTGCCTGCACCAGGGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQAVHRCFGGIPGPR*QGQLPSHLPAPGGG Trigger: CCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACTGCCCTTGTCAACGAGGCCCTGGAATACCACCAAAGCATCTATGCACAGCCTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS TCA 90 bp | TCTCCTCCTGCTACAAACAGGAAGTCCCCCATGACTGCCACACAGTaGTGGCTCCTTCCCACCGGCATGGGAGCCAGCTCACTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPATNRKSPMTATQ*WLLPTGMGASSLQL Trigger: CAACTGGAGTGAGCTGGCTCCCATGCCGGTGGGAAGGAGCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTAGCAGGAGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 90 bp | GGACTGGAATCGCGGTTTTGTCCGGCGGGTCTGCCACACAGGCTGTaGATAGATGCTTTGGTGGTATTCCAGGGCCTCGTTGACAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLESRFCPAGLPHRL*IDALVVFQGLVDKG Trigger: GCCCTTGTCAACGAGGCCCTGGAATACCACCAAAGCATCTATGCACAGCCTGTGTGGCAGACCCGCCGGACAAAACCGCGATTCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CCA 90 bp | GCCGTCTCACTTGCCTGCACCAGGGGGTGGGATAGGGCAACCGTGTaGAGTGTATCCACATCCATTAGGCCAAAGCGGATGTACTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVSLACTRGWDRATV*SVSTSIRPKRMYCR Trigger: CCTGCAGTACATCCGCTTTGGCCTAATGGATGTGGATACACTCCACACGGTTGCCCTATCCCACCCCCTGGTGCAGGCAAGTGAGACGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 90 bp | ATGTTCCACTTCTCCTCCTGCTACAAACAGGAAGTCCCCCATGACTaGCACACAGTGATGGCTCCTTCCCACCGGCATGGGAGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MFHFSSCYKQEVPHD*HTVMAPSHRHGSQL Trigger: GAGCTGGCTCCCATGCCGGTGGGAAGGAGCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTAGCAGGAGGAGAAGTGGAACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 90 bp | CCTCACGGCACATGTCCGGCCACTGGCATGTTCCACTTCTCCTCCTaGTACAAACAGGAAGTCCCCCATGACTGCCACACAGTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHGTCPATGMFHFSS*YKQEVPHDCHTVMA Trigger: AGCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTAGCAGGAGGAGAAGTGGAACATGCCAGTGGCCGGACATGTGCCGTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CCA 90 bp | TCGTTGACAAGGGCAGTTGCCGTCTCACTTGCCTGCACCAGGGGGTaGGATAGGGCAACCGTGTGGAGTGTATCCACATCCATTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLTRAVAVSLACTRG*DRATVWSVSTSIRP Trigger: TGGCCTAATGGATGTGGATACACTCCACACGGTTGCCCTATCCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACTGCCCTTGTCAACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | ATTCCTGCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGGCCAGCTCACTCCAGTaGGCAATGGCGGCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPAQDRCSAFPMLSDSHRASSLQ*AMAAMR Trigger: CCTCATAGCCGCCATTGCCAACTGGAGTGAGCTGGC...CCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGCAGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCAGTTGCCGTCTCACTaGCCTGCACCAGGGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FRPVRHDREALRMSMPCVQLPSH*PAPGGG Trigger: CCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACTG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 90 bp | CGTGGAATTTCTGTTCCTCGGCGATCAGGGTCACGTCGCAGAGAATaGCATCACTTCTTTGCTGATTCAGCGCCGCCAGGACCGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGISVPRRSGSRRRE*HHFFADSAPPGPCH Trigger: ATGACACGGTCCTGGCGGCGCTGAATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGACCCTGATCGCCGAGGAACAGAAATTCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCACCTGTGGTGAGGCACTaGCAGAGTCTGCAGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSPVVRH*QSLQVG Trigger: CCCAACCTGCAGACTCTGCAAGTGCCTCACCACAGG...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | ATTCCTGCTCAGGATAGGTGTAGCGCCTTCCCAATGCTCTCAGACTCCCACAGGCTGTGCATAGATGCTTaGGTGGTATTCCAGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPAQDRCSAFPMLSDSHRLCIDA*VVFQGL Trigger: GAGGCCCTGGAATACCACCAAAGCATCTATGCACAG...CCTGTGGGAGTCTGAGAGCATTGGGAAGGCGCTACACCTATCCTGAGCAGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCCCTGTGGTGAGGCACTaGCAGAGTCTGCAGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FRPVRHDREALRMSMPCVPVVRH*QSLQVG Trigger: CCCAACCTGCAGACTCTGCAAGTGCCTCACCACAGG...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | CATAGCTCAGGCCAGACTCCAACTCAAATTTCTCTTAGGCACTCCAATGGCAGGCCTGTGGTGAGGCACTaGCAGAGTCTGCAGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSGQTPTQISLRHSNGRPVVRH*QSLQVG Trigger: CCCAACCTGCAGACTCTGCAAGTGCCTCACCACAGG...CCTGCCATTGGAGTGCCTAAGAGAAATTTGAGTTGGAGTCTGGCCTGAGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGCCAGCTCACTCCAGTaGGCAATGGCGGCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HNFRPVRHDREALRMSMPASSLQ*AMAAMR Trigger: CCTCATAGCCGCCATTGCCAACTGGAGTGAGCTGGC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CCA 90 bp | TCCTTTGGACAGCAGCCATGGAGTGGTAGACTCTTCTCTGTAGCATaGGGCTGCGACTTATCCACTTATTCTGCCAGATCTGCTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFGQQPWSGRLFSVA*GCDLSTYSARSAPH Trigger: GTGAGGAGCAGATCTGGCAGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGAGAAGAGTCTACCACTCCATGGCTGCTGTCCAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108214.9 |
||
| CDS GCA 90 bp | TGCAGAAGAGGCATGGCCTGTCCTGTATATGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTCACACCACGTAAATTTACTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: CRRGMACPVYANSRA*FKPRLVTPRKFTSS Trigger: CGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGGCCATGCCTCTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| CDS CCA 90 bp | CCTGTCCTGTATATGCGAACTCCAGAGCCTGCTTTAAGCCCAGGCTaGTCACACCACGTAAATTTACTTCATCGGCTCCACTTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PVLYMRTPEPALSPG*SHHVNLLHRLHFPP Trigger: TGGTGGAAAGTGGAGCCGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000150920.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCAATGCCATCACTTCTTaGCTGATTCAGCGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FRPVRHDREALRMSMPCVNAITS*LIQRRQ Trigger: CTGGCGGCGCTGAATCAGCAAAGAAGTGATGGCATT...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | TGCCGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTCAGTTGCCGTCTCACTaGCCTGCACCAGGGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRRMALRCTTIKITHIVCQLPSH*PAPGGG Trigger: CCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACTG...ACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTTTGTCCACACAGGGGCTGGCTGTTGGTTTGTGGCTCACCATAGCTCACACATAAAGCTTCCTTaGGACAGCAGCCATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCFVHTGAGCWFVAHHSSHIKLP*DSSHGV Trigger: CACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTG...TGAGCTATGGTGAGCCACAAACCAACAGCCAGCCCCTGTGTGGACAAAACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | AACACATGGGCTAATGCAAGGACAGGCAAGCCCACTGCCCTGCTGGACACAGAGAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NTWANARTGKPTALLDTEKPEAH*SKLNIH Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...CTCTGTGTCCAGCAGGGCAGTGGGCTTGCCTGTCCTTGCATTAGCCCATGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS CCA 90 bp | TCTGTCCTGTATATGCGAACTCCAGAGCCTGCTTTAAGCCCAGGCTaGTCACACCACGTAAATTTACTTCATCGGCTCCACTTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLYMRTPEPALSPG*SHHVNLLHRLHFPP Trigger: TGGTGGAAAGTGGAGCCGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCGCCCGTCAGCATTTCTaGAATACTGAGGCAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRPVRHDREALRMSMPCVARQHF*NTEAVF Trigger: GAACACTGCCTCAGTATTCAAGAAATGCTGACGGGC...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCCTGTGCATAGATGCTTaGGTGGTATTCCAGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HNFRPVRHDREALRMSMPLCIDA*VVFQGL Trigger: GAGGCCCTGGAATACCACCAAAGCATCTATGCACAG...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS TCA 90 bp | ACCCCACCTGATATCCAAAGAAGACCATCAGCCACATATCCAGCGTaGCACGAGAGGGATCTGTCAAAGGACTGCACAAAAGTCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPPDIQRRPSATYPA*HERDLSKDCTKVHL Trigger: CAAATGGACTTTTGTGCAGTCCTTTGACAGATCCCTCTCGTGTCACGCTGGATATGTGGCTGATGGTCTTCTTTGGATATCAGGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 90 bp | CCTGGCTCCAACAAAATCTGTCCTGTATATGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTCACACCACGTAAATTTACTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: PGSNKICPVYANSRA*FKPRLVTPRKFTSS Trigger: CGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGATTTTGTTGGAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCCGAAGTTCCTTGACTTaGCAGACCTCACGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HNFRPVRHDREALRMSMPRSSLT*QTSRFF Trigger: GAAGAAGCGTGAGGTCTGCAAAGTCAAGGAACTTCG...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCGCCCGTCAGCATTTCTaGAATACTGAGGCAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIARQHF*NTEAVF Trigger: GAACACTGCCTCAGTATTCAAGAAATGCTGACGGGC...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | TATTGGCAGTGGTGGAGAACCCTCCAAGTAGGCAAGATTGACATTGCCTTTATCCGAAGTTCCTTGACTTaGCAGACCTCACGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YWQWWRTLQVGKIDIAFIRSSLT*QTSRFF Trigger: GAAGAAGCGTGAGGTCTGCAAAGTCAAGGAACTTCG...GATAAAGGCAATGTCAATCTTGCCTACTTGGAGGGTTCTCCACCACTGCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | AATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTCACATAAAGCTTCCTTaGGACAGCAGCCATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NFRPVRHDREALRMSMPCHIKLP*DSSHGV Trigger: CACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTG...ACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | ACATTGCCTTTATCAACTTGGAAAACGTCTATTAGAACTGCTGGCTGCAGGCTCGCCCGTCAGCATTTCTaGAATACTGAGGCAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLPLSTWKTSIRTAGCRLARQHF*NTEAVF Trigger: GAACACTGCCTCAGTATTCAAGAAATGCTGACGGGC...GAGCCTGCAGCCAGCAGTTCTAATAGACGTTTTCCAAGTTGATAAAGGCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCGTCCATTTGTTCTTCTaGGGGCAGTATCGTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: HNFRPVRHDREALRMSMPVHLFF*GQYRST Trigger: AGTTGAACGATACTGCCCCAAGAAGAACAAATGGAC...GGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAAATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCTGCACAAAAGTCCATTaGTTCTTCTTGGGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FRPVRHDREALRMSMPCVCTKVH*FFLGQY Trigger: ATACTGCCCCAAGAAGAACAAATGGACTTTTGTGCA...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | AAGCTTGGAAGAGTCAATTCTAACTCTCTTCTTGTACCACATGGATCCCGGGATCACATAAAGCTTCCTTaGGACAGCAGCCATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLGRVNSNSLLVPHGSRDHIKLP*DSSHGV Trigger: CACTCCATGGCTGCTGTCCAAAGGAAGCTTTATGTG...ATCCCGGGATCCATGTGGTACAAGAAGAGAGTTAGAATTGACTCTTCCAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTGTAAGACACGATAGGGAAGCACTGAGGATGTCCATGCCCTGTGTCAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FRPVRHDREALRMSMPCVKPEAH*SKLNIH Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...GACACAGGGCATGGACATCCTCAGTGCTTCCCTATCGTGTCTTACAGGTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS GCA 90 bp | TTAAAGCTATTTAGTTCCTGTCCTGTATATGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTCACACCACGTAAATTTACTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LKLFSSCPVYANSRA*FKPRLVTPRKFTSS Trigger: CGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGGAACTAAATAGCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084781.6 |
||
| CDS TCA 90 bp | CTTATCCACTTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCTaGTACTGTGCGGTGTTTGTCACCCCACCTGATATCCAAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LIHLFWLGSYTISLF*YCAVFVTPPDIQRR Trigger: TCTTCTTTGGATATCAGGTGGGGTGACAAACACCGCACAGTATCAGAACAGACTGATGGTATATGAACCTAACCAGAATAAGTGGATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | TTGAATATCCACCAACTAAATATATTCTCCCATTATGGACAGCGACTCCAGATTGCCCGTCAGCATTTCTaGAATACTGAGGCAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNIHQLNIFSHYGQRLQIARQHF*NTEAVF Trigger: GAACACTGCCTCAGTATTCAAGAAATGCTGACGGGC...AATCTGGAGTCGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140652.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAAATACGATTCCACAGACTTTTTCACTGCAGATGAGTTTGAGAAAGCGAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HTKYDSTDFFTADEFEKAKPEAH*SKLNIH Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...CGCTTTCTCAAACTCATCTGCAGTGAAAAAGTCTGTGGAATCGTATTTGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | ACTTATGTCAACGCCTTCCGTGGTGCCATGGTTAGTACAGGTAATGTTTTTAATTGCACAAAAGTCCATTaGTTCTTCTTGGGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TYVNAFRGAMVSTGNVFNCTKVH*FFLGQY Trigger: ATACTGCCCCAAGAAGAACAAATGGACTTTTGTGCA...ATTAAAAACATTACCTGTACTAACCATGGCACCACGGAAGGCGTTGACATAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS-3UTR CAA 90 bp | CGTAGGATGGCACTAAGGTGCACCACAATAAAAATCACACATATTGTATGTTTTGTCCATTTGTTCTTCTaGGGGCAGTATCGTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RRMALRCTTIKITHIVCFVHLFF*GQYRST Trigger: AGTTGAACGATACTGCCCCAAGAAGAACAAATGGAC...AAAACATACAATATGTGTGATTTTTATTGTGGTGCACCTTAGTGCCATCCTACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108218.10 |
||
| CDS CAA 72 bp | CTCCTTCCCACCGGCATGGGAGCCAGCTCACTCCAGTaGGCAATGGCGGCTATGAGGGCATTCTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPTGMGASSLQ*AMAAMRAFSWS Trigger: GGACCAGGAGAATGCCCTCATAGCCGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCGGTGGGAAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CCA 72 bp | AGGGCAGTTGCCGTCTCACTTGCCTGCACCAGGGGGTaGGATAGGGCAACCGTGTGGAGTGTATCCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: RAVAVSLACTRG*DRATVWSVSTS Trigger: GGATGTGGATACACTCCACACGGTTGCCCTATCCCACCCCCTGGTGCAGGCAAGTGAGACGGCAACTGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS TCA 72 bp | GCTACAAACAGGAAGTCCCCCATGACTGCCACACAGTaGTGGCTCCTTCCCACCGGCATGGGAGCCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATNRKSPMTATQ*WLLPTGMGASS Trigger: TGAGCTGGCTCCCATGCCGGTGGGAAGGAGCCATCACTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CAA 90 bp | CGGTTTTGTCCGGCGGGTCTGCCACACAGGCTGTGCATAGATGCTTaGGTGGTATTCCAGGGCCTCGTTGACAAGGGCAGTTGCCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFCPAGLPHRLCIDA*VVFQGLVDKGSCRL Trigger: GAGACGGCAACTGCCCTTGTCAACGAGGCCCTGGAATACCACCAAAGCATCTATGCACAGCCTGTGTGGCAGACCCGCCGGACAAAACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 72 bp | TCGCGGTTTTGTCCGGCGGGTCTGCCACACAGGCTGTaGATAGATGCTTTGGTGGTATTCCAGGGCCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRFCPAGLPHRL*IDALVVFQGLV Trigger: AACGAGGCCCTGGAATACCACCAAAGCATCTATGCACAGCCTGTGTGGCAGACCCGCCGGACAAAACCGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CCA 72 bp | CTTGCCTGCACCAGGGGGTGGGATAGGGCAACCGTGTaGAGTGTATCCACATCCATTAGGCCAAAGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LACTRGWDRATV*SVSTSIRPKRM Trigger: CATCCGCTTTGGCCTAATGGATGTGGATACACTCCACACGGTTGCCCTATCCCACCCCCTGGTGCAGGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 72 bp | TCTGTTCCTCGGCGATCAGGGTCACGTCGCAGAGAATaGCATCACTTCTTTGCTGATTCAGCGCCGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVPRRSGSRRRE*HHFFADSAPPG Trigger: TCCTGGCGGCGCTGAATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGACCCTGATCGCCGAGGAACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS CAA 90 bp | TTCCTCGGCGATCAGGGTCACGTCGCAGAGAATGCCATCACTTCTTaGCTGATTCAGCGCCGCCAGGACCGTGTCATTGTGAGTTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: FLGDQGHVAENAITS*LIQRRQDRVIVSFR Trigger: TCGGAAACTCACAATGACACGGTCCTGGCGGCGCTGAATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGACCCTGATCGCCGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS TCA 72 bp | GTGCATAGATGCTTTGGTGGTATTCCAGGGCCTCGTTaGCAAGGGCAGTTGCCGTCTCACTTGCCTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VHRCFGGIPGPR*QGQLPSHLPAP Trigger: TGGTGCAGGCAAGTGAGACGGCAACTGCCCTTGTCAACGAGGCCCTGGAATACCACCAAAGCATCTATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS CAA 72 bp | GATCAGGGTCACGTCGCAGAGAATGCCATCACTTCTTaGCTGATTCAGCGCCGCCAGGACCGTGTCATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DQGHVAENAITS*LIQRRQDRVIV Trigger: CACAATGACACGGTCCTGGCGGCGCTGAATCAGCAAAGAAGTGATGGCATTCTCTGCGACGTGACCCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS GCA 72 bp | GGCATGGCCTGTCCTGTATATGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTCACACCACGTAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: GMACPVYANSRA*FKPRLVTPRKF Trigger: AAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGGCCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150920.8 |
||
| CDS GCA 72 bp | CCATGGAGTGGTAGACTCTTCTCTGTAGCATGGGGCTaGGACTTATCCACTTATTCTGCCAGATCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PWSGRLFSVAWG*DLSTYSARSAP Trigger: AGGAGCAGATCTGGCAGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGAGAAGAGTCTACCACTCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108214.9 |
||
| CDS CCA 72 bp | CAGCAGCCATGGAGTGGTAGACTCTTCTCTGTAGCATaGGGCTGCGACTTATCCACTTATTCTGCCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: QQPWSGRLFSVA*GCDLSTYSARS Trigger: AGATCTGGCAGAATAAGTGGATAAGTCGCAGCCCCATGCTACAGAGAAGAGTCTACCACTCCATGGCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108214.9 |
||
| CDS CCA 72 bp | TATATGCGAACTCCAGAGCCTGCTTTAAGCCCAGGCTaGTCACACCACGTAAATTTACTTCATCGGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: YMRTPEPALSPG*SHHVNLLHRLH Trigger: GTGGAGCCGATGAAGTAAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084781.6 ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 ENSMUST00000150920.8 |
||
| CDS GCA 72 bp | TTTAGTTCCTGTCCTGTATATGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTCACACCACGTAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: FSSCPVYANSRA*FKPRLVTPRKF Trigger: AAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGGAACTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084781.6 |
||
| CDS CAA 90 bp | GAGAGGGATCTGTCAAAGGACTGCACAAAAGTCCATTTGTTCTTCTaGGGGCAGTATCGTTCAACTGTAGGTAGAACTTGGCACAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ERDLSKDCTKVHLFF*GQYRSTVGRTWHSS Trigger: TGAACTGTGCCAAGTTCTACCTACAGTTGAACGATACTGCCCCAAGAAGAACAAATGGACTTTTGTGCAGTCCTTTGACAGATCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS GCA 72 bp | AACAAAATCTGTCCTGTATATGCGAACTCCAGAGCCTaGTTTAAGCCCAGGCTGGTCACACCACGTAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: NKICPVYANSRA*FKPRLVTPRKF Trigger: AAATTTACGTGGTGTGACCAGCCTGGGCTTAAAGCAGGCTCTGGAGTTCGCATATACAGGACAGATTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108214.9 ENSMUST00000108218.10 ENSMUST00000140652.8 |
||
| CDS CAA 72 bp | GAGAGGGATCTGTCAAAGGACTGCACAAAAGTCCATTaGTTCTTCTTGGGGCAGTATCGTTCAACTGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ERDLSKDCTKVH*FFLGQYRSTVG Trigger: ACCTACAGTTGAACGATACTGCCCCAAGAAGAACAAATGGACTTTTGTGCAGTCCTTTGACAGATCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||
| CDS TCA 72 bp | TTATTCTGGTTAGGTTCATATACCATCAGTCTGTTCTaGTACTGTGCGGTGTTTGTCACCCCACCTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: LFWLGSYTISLF*YCAVFVTPPDI Trigger: GATATCAGGTGGGGTGACAAACACCGCACAGTATCAGAACAGACTGATGGTATATGAACCTAACCAGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084781.6 ENSMUST00000108218.10 |
||