Pregenerated sensors for KLHL30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026308Ensembl transcript IDs: ENSMUST00000027533.9
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCGCATCCCCTGCCTTCCTAGCCTCTCTTCAGGGGCCGCTTTCCTaGTGTCAGAGGTACCCATGGTGGAGCAGAGCCACCTTCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TASPAFLASLQGPLS*CQRYPWWSRATFLP Trigger: TGGGAGGAAGGTGGCTCTGCTCCACCATGGGTACCTCTGACACCAGGAAAGCGGCCCCTGAAGAGAGGCTAGGAAGGCAGGGGATGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 90 bp | AAGCTGTGGACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTaGGCCTCCAAGCTTGAGGCCCTGGCTCAATGTTGGGGTATTCCA | + |
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Preference number: 1 (lower is better) Translates to: KLWTWSKSMAWPALG*ASKLEALAQCWGIP Trigger: TGGAATACCCCAACATTGAGCCAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGTCCACAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR TCA 90 bp | TGGGGTCTTCAGGGACAGCAGAGCCCTCTCCTCCACTGTGTGAGCTaGGTGTCAGGGTCTCGCTTGCTCTTACAACTGGTGACAAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: WGLQGQQSPLLHCVS*VSGSRLLLQLVTKL Trigger: CAACTTTGTCACCAGTTGTAAGAGCAAGCGAGACCCTGACACTCAGCTCACACAGTGGAGGAGAGGGCTCTGCTGTCCCTGAAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 90 bp | GATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTaGAGGAGAGCAAGAGGGCAAAGGGACAGAGATGTGGAGACTGAA | + |
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Preference number: 1 (lower is better) Translates to: DSSLLFVWLQIWCLV*RRARGQRDRDVETE Trigger: TTCAGTCTCCACATCTCTGTCCCTTTGCCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR TCA 90 bp | GGGCAAAGGGACAGAGATGTGGAGACTGAAAAATGCATGACCTCATaGGACCACGGTCTGAGTCATGTTAAATCATATCATGATTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GQRDRDVETEKCMTS*DHGLSHVKSYHDWQ Trigger: CTGCCAATCATGATATGATTTAACATGACTCAGACCGTGGTCTCATGAGGTCATGCATTTTTCAGTCTCCACATCTCTGTCCCTTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCGCCCAGCCCATGCCTTaGAGGGGGCAGCAACTCACA | + |
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Preference number: 2 (lower is better) Translates to: RVHQMLAPPHLSISPEASAQPMP*RGQQLT Trigger: TGTGAGTTGCTGCCCCCTCCAAGGCATGGGCTGGGC...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGGTGTCAGAGGTACCCATGGTGGAGCAGAGCCACCTTCCTCCCAGAAGCATTGTGCAGGACAATaGGGAGCAGAGCCAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: FPGVRGTHGGAEPPSSQKHCAGQ*GAEPGT Trigger: AGTTCCTGGCTCTGCTCCTCATTGTCCTGCACAATG...CTTCTGGGAGGAAGGTGGCTCTGCTCCACCATGGGTACCTCTGACACCAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGGTGTCAGAGGTACCCATGGTGGAGCAGAGCCACCTTCCTCCCAGAAGCATGTGGGGCGAATGTaGAATCTGAGGAAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: FPGVRGTHGGAEPPSSQKHVGRM*NLRKEG Trigger: CCCCTCTTTCCTCAGATTCCACATTCGCCCCACATG...CTTCTGGGAGGAAGGTGGCTCTGCTCCACCATGGGTACCTCTGACACCAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGCAAAGGGGGCGAATGTGGAATCTaGGGAAAGAGGGGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSGYKSGASSGGEQEGKGGECGI*GKRGER Trigger: CCTCTCTCCCCTCTTTCCTCAGATTCCACATTCGCC...CCCTTTGCCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCAGAAGCAGCTATGTAAACACAGTGCCAACACACAGAGGCTAGAGATGCTCTCCTCCACTGTGTaGGCTGAGTGTCAGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSQKQLCKHSANTQRLEMLSSTV*AECQGL Trigger: GAGACCCTGACACTCAGCTCACACAGTGGAGGAGAG...CATCTCTAGCCTCTGTGTGTTGGCACTGTGTTTACATAGCTGCTTCTGGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGCAAAGGGAGGAAGCTGTGGACATaGTCAAAGAGCATGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LSGYKSGASSGGEQEGKGRKLWT*SKSMAW Trigger: CCATGCCATGCTCTTTGACCATGTCCACAGCTTCCT...CCCTTTGCCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGTGGCCTGCTCTAGGCTaGGCCTCCAAGCTTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HSDSSLLFVWLQIWCLVWWPALG*ASKLEA Trigger: GGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCA...CCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGGGAGAGAGGAAGCTGTaGACATGGTCAAAGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: LLFVWLQIWCLVWRRARGGERKL*TWSKSM Trigger: CATGCTCTTTGACCATGTCCACAGCTTCCTCTCTCC...CCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGGGATCAGGTGTGAGATACCCCGAATATCAAACATTAACTCATTTATCACAGGGGCCGCTTTCCTaGTGTCAGAGGTACCCATGG | + |
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Preference number: 2 (lower is better) Translates to: GEGSGVRYPEYQTLTHLSQGPLS*CQRYPW Trigger: CCATGGGTACCTCTGACACCAGGAAAGCGGCCCCTG...TGATAAATGAGTTAATGTTTGATATTCGGGGTATCTCACACCTGATCCCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGTGTTATGGTCGAAAGTaGCTACAACATGAGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: HSDSSLLFVWLQIWCLVWCYGRK*LQHEEL Trigger: CAGTTCCTCATGTTGTAGTCACTTTCGACCATAACA...CCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCACTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAAATCATATCATGATTaGCAGGAGAGTCCATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: HSDSSLLFVWLQIWCLVWKSYHD*QESPSD Trigger: ATCTGATGGACTCTCCTGCCAATCATGATATGATTT...CCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCACTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR GCA 72 bp | CTACCGTCTCACTCTCCTGCCCTGAACCGCATCCCCTaGCTTCCTAGCCTCTCTTCAGGGGCCGCTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LPSHSPALNRIP*LPSLSSGAAFL Trigger: CAGGAAAGCGGCCCCTGAAGAGAGGCTAGGAAGGCAGGGGATGCGGTTCAGGGCAGGAGAGTGAGACGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 72 bp | CCTGCCTTCCTAGCCTCTCTTCAGGGGCCGCTTTCCTaGTGTCAGAGGTACCCATGGTGGAGCAGAGCCACC | + |
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Preference number: 3 (lower is better) Translates to: PAFLASLQGPLS*CQRYPWWSRAT Trigger: GGTGGCTCTGCTCCACCATGGGTACCTCTGACACCAGGAAAGCGGCCCCTGAAGAGAGGCTAGGAAGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR TCA 72 bp | CAGGGACAGCAGAGCCCTCTCCTCCACTGTGTGAGCTaGGTGTCAGGGTCTCGCTTGCTCTTACAACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: QGQQSPLLHCVS*VSGSRLLLQLV Trigger: CACCAGTTGTAAGAGCAAGCGAGACCCTGACACTCAGCTCACACAGTGGAGGAGAGGGCTCTGCTGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 72 bp | ACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTaGGCCTCCAAGCTTGAGGCCCTGGCTCAATGTTGG | + |
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Preference number: 3 (lower is better) Translates to: TWSKSMAWPALG*ASKLEALAQCW Trigger: CCAACATTGAGCCAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CAA 90 bp | GCCTTCATCCAGCCACCCCATGTGGGGCGAATGTGGAATCTGAGGAAAGAGGGGGTGTCAGGGTCTCGCTaGCTCTTACAACTGGTGACA | + |
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Preference number: 3 (lower is better) Translates to: AFIQPPHVGRMWNLRKEGVSGSR*LLQLVT Trigger: TGTCACCAGTTGTAAGAGCAAGCGAGACCCTGACAC...CCCCTCTTTCCTCAGATTCCACATTCGCCCCACATGGGGTGGCTGGATGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CAA 90 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGAGCCCAGCCCATGCCTaGGAGGGGGCAGCAACTCAC | + |
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Preference number: 3 (lower is better) Translates to: LLFVWLQIWCLVWRRARGSPAHA*EGAATH Trigger: GTGAGTTGCTGCCCCCTCCAAGGCATGGGCTGGGCT...CCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR-3UTR CAA 90 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGGCTGGGCCTCCAAGCTaGAGGCCCTGGCTCAATGTT | + |
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Preference number: 3 (lower is better) Translates to: LLFVWLQIWCLVWRRARGAGPPS*RPWLNV Trigger: AACATTGAGCCAGGGCCTCAAGCTTGGAGGCCCAGC...CCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 72 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTaGAGGAGAGCAAGAGGGCAAAGGGACAGAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: LLFVWLQIWCLV*RRARGQRDRDV Trigger: CACATCTCTGTCCCTTTGCCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR TCA 72 bp | ATGAAGACAGTGTTATGGTCGAAAGTGACTACAACATaGGGAACTGTCTTAGCACTGGGCAGCTTGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: MKTVLWSKVTTT*GTVLALGSLGT Trigger: GGTTCCCAAGCTGCCCAGTGCTAAGACAGTTCCTCATGTTGTAGTCACTTTCGACCATAACACTGTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 72 bp | GACCACGGTCTGAGTCATGTTAAATCATATCATGATTaGCAGGAGAGTCCATCAGATGTTAGCTCCACCCCA | + |
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Preference number: 3 (lower is better) Translates to: DHGLSHVKSYHD*QESPSDVSSTP Trigger: TGGGGTGGAGCTAACATCTGATGGACTCTCCTGCCAATCATGATATGATTTAACATGACTCAGACCGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CCA 72 bp | AGTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTaGTGCCTCGTCTGGAGGAGAGCAAGAGGGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SDSSLLFVWLQI*CLVWRRARGQR Trigger: CCTTTGCCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR TCA 72 bp | GACAGAGATGTGGAGACTGAAAAATGCATGACCTCATaGGACCACGGTCTGAGTCATGTTAAATCATATCAT | + |
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Preference number: 3 (lower is better) Translates to: DRDVETEKCMTS*DHGLSHVKSYH Trigger: ATGATATGATTTAACATGACTCAGACCGTGGTCTCATGAGGTCATGCATTTTTCAGTCTCCACATCTCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | TCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGCCCTGTGGGACAGGGCCTCCTaGCACGCCTCTGACTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKSMAWPALGWASKLEALWDRAS*HASDSW Trigger: CCAGGAGTCAGAGGCGTGTCAGGAGGCCCTGTCCCA...CAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR GCA 90 bp | CCCAGCCTTCATCCAGCCACCCCATGTGGGGCGAATGTGGAATCTGAGGAAAGAGCGCTCTACCTCCACTaGGTCCAGGGCGGTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PSLHPATPCGANVESEERALYLH*VQGGAT Trigger: GGTGGCACCGCCCTGGACGCAGTGGAGGTAGAGCGC...TCTTTCCTCAGATTCCACATTCGCCCCACATGGGGTGGCTGGATGAAGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | TCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGCCCTGAGGGAGCGCAGACGCTaGAGGCCTTCCAGCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: SKSMAWPALGWASKLEALRERRR*RPSSMS Trigger: AGACATGCTGGAAGGCCTTCAGCGTCTGCGCTCCCT...CAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | ACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGCCCCGACCAGCAGTGTaGCATCGGCCAGCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TWSKSMAWPALGWASKLEPRPAV*HRPAWA Trigger: TGCCCAAGCTGGCCGATGTCACACTGCTGGTCGGGG...CTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | TCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGCCCTGCTTGGGCAGGAAAGGTaGAGCGATGACACTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: SKSMAWPALGWASKLEALLGQER*SDDTPR Trigger: GCGTGGAGTGTCATCGCTTCACCTTTCCTGCCCAAG...CAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR GCA 90 bp | TCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGCCCTGACCCCTAGCAGGCCTTaGTGTTCCCCAAACTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKSMAWPALGWASKLEALTPSRP*CSPNSQ Trigger: CTGCGAGTTTGGGGAACAGCAAGGCCTGCTAGGGGT...CAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTTCATCCAGCCACCCCATGTGGGGCGAATGTGGAATCTGAGGAAAGACACGCCTCTGACTCCTaGATCAGTGGCTCCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PSLHPATPCGANVESEERHASDS*ISGSVA Trigger: CGCCACGGAGCCACTGATCCAGGAGTCAGAGGCGTG...TCTTTCCTCAGATTCCACATTCGCCCCACATGGGGTGGCTGGATGAAGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR GCA 90 bp | CTGTGGACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGGGCCTTCAGCATGGGTaGCACAGGCTTCCAGATAGC | + |
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Preference number: 4 (lower is better) Translates to: LWTWSKSMAWPALGWASKGLQHG*HRLPDS Trigger: GCTATCTGGAAGCCTGTGGCACCCATGCTGAAGGCC...CTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGTCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR GCA 90 bp | CTGTGGACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGGGCTCCATTGAGAGCTaGACAGCGTGGAGAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: LWTWSKSMAWPALGWASKGSIES*TAWRGQ Trigger: CTGTCCTCTCCACGCTGTGCAGCTCTCAATGGAGCC...CTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGTCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR CCA 90 bp | TCCTCCCAGAAGCAGCTATGTAAACACAGTGCCAACACACAGAGGCTAGAGATGCGGTCCTGGGGGTCATaGCGCACCCAGCGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSQKQLCKHSANTQRLEMRSWGS*RTQRSR Trigger: CCTGCTGCGCTGGGTGCGCCATGACCCCCAGGACCG...CATCTCTAGCCTCTGTGTGTTGGCACTGTGTTTACATAGCTGCTTCTGGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCATCCAGCCACCCCATGTGGGGCGAATGTGGAATCTGAGGAAAGAGGGGGAGAGCTGCACAGCGTaGAGAGGACAGGTACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: AFIQPPHVGRMWNLRKEGESCTA*RGQVLG Trigger: CCCAAGTACCTGTCCTCTCCACGCTGTGCAGCTCTC...CCCCTCTTTCCTCAGATTCCACATTCGCCCCACATGGGGTGGCTGGATGAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | TCCTCCCAGAAGCAGCTATGTAAACACAGTGCCAACACACAGAGGCTAGAGATGCCAGGTGCACTAGGCTaGGGAGCTCGGGCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSQKQLCKHSANTQRLEMPGALG*GARAGG Trigger: CCCACCTGCCCGAGCTCCTCAGCCTAGTGCACCTGG...CATCTCTAGCCTCTGTGTGTTGGCACTGTGTTTACATAGCTGCTTCTGGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR GCA 90 bp | GCCTTCATCCAGCCACCCCATGTGGGGCGAATGTGGAATCTGAGGAAAGAGGGGCCAGCATGTTGTACTTaGAGGCACTGGAGCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: AFIQPPHVGRMWNLRKEGPACCT*RHWSPP Trigger: TGGTGGGCTCCAGTGCCTGCAAGTACAACATGCTGG...CCCCTCTTTCCTCAGATTCCACATTCGCCCCACATGGGGTGGCTGGATGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCGGTAGTCTCCATCCATaGCTTGCCAGCGGCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: RVHQMLAPPHLSISPEASGSLHP*LASGHP Trigger: CGGGTGGCCGCTGGCAAGGCATGGATGGAGACTACC...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR CCA 90 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGTGGGCAGCCCGGTCCTaGGGGTCATGGCGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLFVWLQIWCLVWRRARGWAARS*GSWRTQ Trigger: CTGGGTGCGCCATGACCCCCAGGACCGGGCTGCCCA...CCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | TCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGCCCTGTTGGCAGCCAGCAGCTaGGAAGTTGCTGACATACTT | + |
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Preference number: 4 (lower is better) Translates to: SKSMAWPALGWASKLEALLAASS*EVADIL Trigger: AAGTATGTCAGCAACTTCTCAGCTGCTGGCTGCCAA...CAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR CCA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCGGGAAGCACCAGGCCTaGGTGGTCGACCAGGTATCT | + |
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Preference number: 4 (lower is better) Translates to: RVHQMLAPPHLSISPEASGKHQA*VVDQVS Trigger: AGATACCTGGTCGACCACCCAGGCCTGGTGCTTCCC...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| 3UTR CAA 72 bp | GAGCTGTGTCATCTGATACTGAGCCCAGCCCATGCCTaGGAGGGGGCAGCAACTCACAGTAGACAGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: ELCHLILSPAHA*EGAATHSRQRT Trigger: TGTCCTCTGTCTACTGTGAGTTGCTGCCCCCTCCAAGGCATGGGCTGGGCTCAGTATCAGATGACACAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR TCA 90 bp | TCCTCCCAGAAGCAGCTATGTAAACACAGTGCCAACACACAGAGGCTAGAGATGGCCTCCACGTTAGCCTaGGTGATGGTCAACCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSQKQLCKHSANTQRLEMASTLA*VMVNRP Trigger: GGGCCGGTTGACCATCACTCAGGCTAACGTGGAGGC...CATCTCTAGCCTCTGTGTGTTGGCACTGTGTTTACATAGCTGCTTCTGGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS-3UTR CCA 90 bp | CATGTTAAATCATATCATGATTGGCAGGAGAGTCCATCAGATGTTAGCTCCACCAGGAGCTCGGGCAGGTaGGCAGCCCGGTCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVKSYHDWQESPSDVSSTRSSGR*AARSWG Trigger: CCCCCAGGACCGGGCTGCCCACCTGCCCGAGCTCCT...GGTGGAGCTAACATCTGATGGACTCTCCTGCCAATCATGATATGATTTAACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCTGTACTTGCAGGCACTaGAGCCCACCAGGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVHQMLAPPHLSISPEASCTCRH*SPPGRG Trigger: GCCTCTACCTGGTGGGCTCCAGTGCCTGCAAGTACA...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR TCA 90 bp | ACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGCCAAGAAGCTCTCAGTaGAGTCTCCAGCAAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: TWSKSMAWPALGWASKLEPRSSQ*SLQQTW Trigger: CCATGTTTGCTGGAGACTTCACTGAGAGCTTCTTGG...CTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCAGAAGCAGCTATGTAAACACAGTGCCAACACACAGAGGCTAGAGATGCTCCTGACACGCCTCTaGCTCCTGGATCAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQKQLCKHSANTQRLEMLLTRL*LLDQWL Trigger: GAGCCACTGATCCAGGAGTCAGAGGCGTGTCAGGAG...CATCTCTAGCCTCTGTGTGTTGGCACTGTGTTTACATAGCTGCTTCTGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR GCA 90 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGGCCTCGAGCCGACTCTaGTCCGGTTGTACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFVWLQIWCLVWRRARGASSRL*SGCTCS Trigger: GCTGCAGGTACAACCGGAGCAGAGTCGGCTCGAGGC...CCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCGGAAAGGTGAAGCGATaGCACTCCACGCATCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVHQMLAPPHLSISPEASGKVKR*HSTHLS Trigger: TGACAGATGCGTGGAGTGTCATCGCTTCACCTTTCC...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR GCA 90 bp | GTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAACGAAGTCCACCAGCTaGCCCACCATAGCCGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLYCLSGYKSGASSGGEQTKSTS*PTIAGS Trigger: GGAGCCGGCTATGGTGGGGCAGCTGGTGGACTTCGT...TTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR GCA 90 bp | GTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGGCACGGCATCCAGGTaGACTAGGCTGAGGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VLYCLSGYKSGASSGGEQGTASR*TRLRSS Trigger: CGAGCTCCTCAGCCTAGTGCACCTGGATGCCGTGCC...TTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGCATCCAGCTGCTGCTaGAGGTATCGGCCGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLYCLSGYKSGASSGGEQASSCC*RYRPQT Trigger: GGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGC...TTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCAGAAGCAGCTATGTAAACACAGTGCCAACACACAGAGGCTAGAGATGATCACTGTTGAGTGCTaGCAGGGAGAAGCCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSQKQLCKHSANTQRLEMITVEC*QGEAPL Trigger: AAGTGGGGCTTCTCCCTGGCAGCACTCAACAGTGAT...CATCTCTAGCCTCTGTGTGTTGGCACTGTGTTTACATAGCTGCTTCTGGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCTCCACTGCCTGGCCTTaGTGTTGTAGAAAGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVHQMLAPPHLSISPEASSTAWP*CCRKQS Trigger: ACTTTGCTTTCTACAACACCAAGGCCAGGCAGTGGA...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR TCA 90 bp | GTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGGGGCAGTGGGGATaGAGGGCTGTGTCCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIVLYCLSGYKSGASSGGEGQWG*RAVSIW Trigger: CCAAATGGACACAGCCCTTCATCCCCACTGCCCCTC...TCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGGATCAGGTGTGAGATACCCCGAATATCAAACATTAACTCATTTATCAGGAAGTAGGGGCTATTaGGCGCCAGAAGGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGSGVRYPEYQTLTHLSGSRGY*APEGCG Trigger: ACCGCAGCCTTCTGGCGCTCAATAGCCCCTACTTCC...TGATAAATGAGTTAATGTTTGATATTCGGGGTATCTCACACCTGATCCCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | GTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGACTCCTGCATCTTCTGTaGGAGGCCAGGAAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIVLYCLSGYKSGASSGGLLHLL*EARKLL Trigger: GAGGAGCTTCCTGGCCTCCCACAGAAGATGCAGGAG...TCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | CACAGTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGTACGGGCCTTCAGCATaGGTGCCACAGGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSDSSLLFVWLQIWCLVWYGPSA*VPQASR Trigger: TCTGGAAGCCTGTGGCACCCATGCTGAAGGCCCGTA...CCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | CATGTTAAATCATATCATGATTGGCAGGAGAGTCCATCAGATGTTAGCTCCACCCCTTCCAGCATGTCTTaGGCATGTGAAGGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HVKSYHDWQESPSDVSSTPSSMS*ACEGRW Trigger: CCATCTGCCTTCACATGCCCAAGACATGCTGGAAGG...GGTGGAGCTAACATCTGATGGACTCTCCTGCCAATCATGATATGATTTAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | GTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAAGACCTTCTGTACAGTaGGGAAGTTCAGGCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIVLYCLSGYKSGASSGGRPSVQ*GSSGVR Trigger: CCTCACGCCTGAACTTCCCCACTGTACAGAAGGTCT...TCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR GCA 90 bp | GGTGAGGGATCAGGTGTGAGATACCCCGAATATCAAACATTAACTCATTTATCAAACATCACTGTTGAGTaGTGCCAGGGAGAAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGSGVRYPEYQTLTHLSNITVE*CQGEAP Trigger: TGGGGCTTCTCCCTGGCAGCACTCAACAGTGATGTT...TGATAAATGAGTTAATGTTTGATATTCGGGGTATCTCACACCTGATCCCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | CATGTTAAATCATATCATGATTGGCAGGAGAGTCCATCAGATGTTAGCTCCACCAGTCTCCAGCAAACATaGCATGGAAGTAGGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HVKSYHDWQESPSDVSSTSLQQT*HGSRGY Trigger: ATAGCCCCTACTTCCATGCCATGTTTGCTGGAGACT...GGTGGAGCTAACATCTGATGGACTCTCCTGCCAATCATGATATGATTTAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGATCAGGTGTGAGATACCCCGAATATCAAACATTAACTCATTTATCAGCATGTGAAGGCAGATaGAAGTCCAGGTCGTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEGSGVRYPEYQTLTHLSACEGR*KSRSSK Trigger: TTTAGACGACCTGGACTTCCATCTGCCTTCACATGC...TGATAAATGAGTTAATGTTTGATATTCGGGGTATCTCACACCTGATCCCTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGATCAGGTGTGAGATACCCCGAATATCAAACATTAACTCATTTATCAAGGGCTGTGTCCATTTaGAGACATCCAGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGSGVRYPEYQTLTHLSRAVSI*RHPERW Trigger: CCATCTTTCTGGATGTCTCCAAATGGACACAGCCCT...TGATAAATGAGTTAATGTTTGATATTCGGGGTATCTCACACCTGATCCCTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | AGGCTGAGGAGCTCGGGCAGGTGGGCAGCCCGGTCCTGGGGGTCATaGCGCACCCAGCGCAGCAGGGCCTCGAGCCGACTCTGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLRSSGRWAARSWGS*RTQRSRASSRLCSG Trigger: ACCGGAGCAGAGTCGGCTCGAGGCCCTGCTGCGCTGGGTGCGCCATGACCCCCAGGACCGGGCTGCCCACCTGCCCGAGCTCCTCAGCCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | CTAGGCACGGCATCCAGGTGCACTAGGCTGAGGAGCTCGGGCAGGTaGGCAGCCCGGTCCTGGGGGTCATGGCGCACCCAGCGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTASRCTRLRSSGR*AARSWGSWRTQRSR Trigger: CCTGCTGCGCTGGGTGCGCCATGACCCCCAGGACCGGGCTGCCCACCTGCCCGAGCTCCTCAGCCTAGTGCACCTGGATGCCGTGCCTAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | GTGGCGAGCAACTGTTGCACGCAGGGCCTAGGCACGGCATCCAGGTaGACTAGGCTGAGGAGCTCGGGCAGGTGGGCAGCCCGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VASNCCTQGLGTASR*TRLRSSGRWAARSW Trigger: CCAGGACCGGGCTGCCCACCTGCCCGAGCTCCTCAGCCTAGTGCACCTGGATGCCGTGCCTAGGCCCTGCGTGCAACAGTTGCTCGCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | GGCACTGGAGCCCACCAGGTAGAGGCGGCCTTGGCAGCCAGCAGCTaGGAAGTTGCTGACATACTTGGGCGCCGGGCCGACGGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGAHQVEAALAASS*EVADILGRRADGSP Trigger: TGGGCTCCCGTCGGCCCGGCGCCCAAGTATGTCAGCAACTTCTCAGCTGCTGGCTGCCAAGGCCGCCTCTACCTGGTGGGCTCCAGTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | ACCCAGCGCAGCAGGGCCTCGAGCCGACTCTGCTCCGGTTGTACCTaGAGCAGGTCGCTGGCCAGACAGGTAGCCAGCCGGTCTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRSRASSRLCSGCT*SRSLARQVASRSLA Trigger: GGCAAGAGACCGGCTGGCTACCTGTCTGGCCAGCGACCTGCTGCAGGTACAACCGGAGCAGAGTCGGCTCGAGGCCCTGCTGCGCTGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | GAAGGCTGCGGTGACAGGGCAGCTCCTGGTCCCCGACCAGCAGTGTaGCATCGGCCAGCTTGGGCAGGGAGCGCAGACGCTGAAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGCGDRAAPGPRPAV*HRPAWAGSADAEGL Trigger: AAGGCCTTCAGCGTCTGCGCTCCCTGCCCAAGCTGGCCGATGTCACACTGCTGGTCGGGGACCAGGAGCTGCCCTGTCACCGCAGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | GGGAGGCCAGGAAGCTCCTCACTGTGGCCCTGGGACAGGGCCTCCTaGCACGCCTCTGACTCCTGGATCAGTGGCTCCGTGGCGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRPGSSSLWPWDRAS*HASDSWISGSVASN Trigger: GTTGCTCGCCACGGAGCCACTGATCCAGGAGTCAGAGGCGTGTCAGGAGGCCCTGTCCCAGGGCCACAGTGAGGAGCTTCCTGGCCTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | CAGCGCCCGTCCTCCAACGACCACCAGCACCTCCTGCATCTTCTGTaGGAGGCCAGGAAGCTCCTCACTGTGGCCCTGGGACAGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPSSNDHQHLLHLL*EARKLLTVALGQGL Trigger: GAGGCCCTGTCCCAGGGCCACAGTGAGGAGCTTCCTGGCCTCCCACAGAAGATGCAGGAGGTGCTGGTGGTCGTTGGAGGACGGGCGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | TCGTCCTCCTCCAGCGCCCGTCCTCCAACGACCACCAGCACCTCCTaGATCTTCTGTGGGAGGCCAGGAAGCTCCTCACTGTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSARPPTTTSTS*IFCGRPGSSSLWPW Trigger: CCAGGGCCACAGTGAGGAGCTTCCTGGCCTCCCACAGAAGATGCAGGAGGTGCTGGTGGTCGTTGGAGGACGGGCGCTGGAGGAGGACGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | CACGCCTCTGACTCCTGGATCAGTGGCTCCGTGGCGAGCAACTGTTaGACGCAGGGCCTAGGCACGGCATCCAGGTGCACTAGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HASDSWISGSVASNC*TQGLGTASRCTRLR Trigger: CCTCAGCCTAGTGCACCTGGATGCCGTGCCTAGGCCCTGCGTGCAACAGTTGCTCGCCACGGAGCCACTGATCCAGGAGTCAGAGGCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | CATCCAGCTGCTGCTGGAGGTATCGGCCGCAGACCTTCTGTACAGTaGGGAAGTTCAGGCGTGAGGCGGAGCGGGTCAGCGCCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: HPAAAGGIGRRPSVQ*GSSGVRRSGSAPPR Trigger: ACGTGGAGGCGCTGACCCGCTCCGCCTCACGCCTGAACTTCCCCACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | AAGTTCAGGCGTGAGGCGGAGCGGGTCAGCGCCTCCACGTTAGCCTaGGTGATGGTCAACCGGCCCGTGTACACGAAGTCCACCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KFRREAERVSASTLA*VMVNRPVYTKSTSC Trigger: GCAGCTGGTGGACTTCGTGTACACGGGCCGGTTGACCATCACTCAGGCTAACGTGGAGGCGCTGACCCGCTCCGCCTCACGCCTGAACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | AAGCTCCTCACTGTGGCCCTGGGACAGGGCCTCCTGACACGCCTCTaGCTCCTGGATCAGTGGCTCCGTGGCGAGCAACTGTTGCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLTVALGQGLLTRL*LLDQWLRGEQLLHA Trigger: TGCGTGCAACAGTTGCTCGCCACGGAGCCACTGATCCAGGAGTCAGAGGCGTGTCAGGAGGCCCTGTCCCAGGGCCACAGTGAGGAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | GAGGTATCGGCCGCAGACCTTCTGTACAGTGGGGAAGTTCAGGCGTaGGGCGGAGCGGGTCAGCGCCTCCACGTTAGCCTGAGTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVSAADLLYSGEVQA*GGAGQRLHVSLSDG Trigger: ACCATCACTCAGGCTAACGTGGAGGCGCTGACCCGCTCCGCCTCACGCCTGAACTTCCCCACTGTACAGAAGGTCTGCGGCCGATACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | GCCTGGCCTTGGTGTTGTAGAAAGCAAAGTTCCCAGTGTGGTGGCTaGGTTCCTCACCACCGTCCTCGTCCTCCTCCAGCGCCCGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AWPWCCRKQSSQCGG*VPHHRPRPPPAPVL Trigger: GAGGACGGGCGCTGGAGGAGGACGAGGACGGTGGTGAGGAACCCAGCCACCACACTGGGAACTTTGCTTTCTACAACACCAAGGCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGTGACATCGGCCAGCTaGGGCAGGGAGCGCAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: TWSKSMAWPALGWASKLEVTSAS*GRERRR Trigger: GCGTCTGCGCTCCCTGCCCAAGCTGGCCGATGTCAC...CTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | AGCAGGTCGCTGGCCAGACAGGTAGCCAGCCGGTCTCTTGCCAGCTaGAAGAATTCATCCTCTTGGGCCACCGCCTCAAAGTTCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSLARQVASRSLAS*KNSSSWATASKFSR Trigger: GCGGGAGAACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCTGGCTACCTGTCTGGCCAGCGACCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | CATCTGTCACAGGGCTGTAGCACTGGAGAGCCAGCATGTTGTACTTaGAGGCACTGGAGCCCACCAGGTAGAGGCGGCCTTGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLSQGCSTGEPACCT*RHWSPPGRGGLGSQ Trigger: CTGGCTGCCAAGGCCGCCTCTACCTGGTGGGCTCCAGTGCCTGCAAGTACAACATGCTGGCTCTCCAGTGCTACAGCCCTGTGACAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | GGGCGGTGCCACCGATGGCATAGATCTCTCCATTCAGCGCTGTACTaGCATGGTTCGTACGGGCCTTCAGCATGGGTGCCACAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRCHRWHRSLHSALY*HGSYGPSAWVPQAS Trigger: GGAAGCCTGTGGCACCCATGCTGAAGGCCCGTACGAACCATGCCAGTACAGCGCTGAATGGAGAGATCTATGCCATCGGTGGCACCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | ACCAGCAGTGTGACATCGGCCAGCTTGGGCAGGGAGCGCAGACGCTaGAGGCCTTCCAGCATGTCTTGGGCATGTGAAGGCAGATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSVTSASLGRERRR*RPSSMSWACEGRWK Trigger: CTTCCATCTGCCTTCACATGCCCAAGACATGCTGGAAGGCCTTCAGCGTCTGCGCTCCCTGCCCAAGCTGGCCGATGTCACACTGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | GGGAGCCCAACTGTCCGTGTAGGGATCATAGCGCTCTACCTCCACTaGGTCCAGGGCGGTGCCACCGATGGCATAGATCTCTCCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPTVRVGIIALYLH*VQGGATDGIDLSIQ Trigger: CTGAATGGAGAGATCTATGCCATCGGTGGCACCGCCCTGGACGCAGTGGAGGTAGAGCGCTATGATCCCTACACGGACAGTTGGGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | GGCTGTGTCCATTTGGAGACATCCAGAAAGATGGTAGAGGCCCCATaGTACAGCCAGAGACGGGGTAGAGAGCCATGGCGGGCCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCVHLETSRKMVEAP*YSQRRGREPWRAQA Trigger: TGCCTGGGCCCGCCATGGCTCTCTACCCCGTCTCTGGCTGTACCATGGGGCCTCTACCATCTTTCTGGATGTCTCCAAATGGACACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | CTGTGGACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGAGGAAAGCCCAGGCTTaGGCAGCTACCCCTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LWTWSKSMAWPALGWASKRKAQA*AATPSR Trigger: CCTGCTAGGGGTAGCTGCCAAAGCCTGGGCTTTCCT...CTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGTCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | CGCATCCCCTGCCTTCCTAGCCTCTCTTCAGGGGCCGCTTTCCTGGTGTCAGAGAGATACAGGGCTCCATaGAGAGCTGCACAGCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RIPCLPSLSSGAAFLVSERYRAP*RAAQRG Trigger: TCCACGCTGTGCAGCTCTCAATGGAGCCCTGTATCT...CTCTGACACCAGGAAAGCGGCCCCTGAAGAGAGGCTAGGAAGGCAGGGGATGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | TCCCGCAGGAAAGCCCAGGCTTTGGCAGCTACCCCTAGCAGGCCTTaGTGTTCCCCAAACTCGCAGATGCCCAGACAGTTAGTAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRKAQALAATPSRP*CSPNSQMPRQLVAS Trigger: GGATGCTACTAACTGTCTGGGCATCTGCGAGTTTGGGGAACAGCAAGGCCTGCTAGGGGTAGCTGCCAAAGCCTGGGCTTTCCTGCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | TACCTGCAGCAGGTCGCTGGCCAGACAGGTAGCCAGCCGGTCTCTTaGCAGCTGCAAGAATTCATCCTCTTGGGCCACCGCCTCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YLQQVAGQTGSQPVS*QLQEFILLGHRLKV Trigger: AACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCTGGCTACCTGTCTGGCCAGCGACCTGCTGCAGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | CAGGTAGCCAGCCGGTCTCTTGCCAGCTGCAAGAATTCATCCTCTTaGGCCACCGCCTCAAAGTTCTCCCGCAGGAAAGCCCAGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVASRSLASCKNSSS*ATASKFSRRKAQAL Trigger: CAAAGCCTGGGCTTTCCTGCGGGAGAACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCTGGCTACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGTGTCAGAGGTACCCATGGTGGAGCAGAGCCACCTTCCTCCCAGAAGGCCAGCATGTTGTACTaGCAGGCACTGGAGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FPGVRGTHGGAEPPSSQKASMLY*QALEPT Trigger: GGTGGGCTCCAGTGCCTGCAAGTACAACATGCTGGC...CTTCTGGGAGGAAGGTGGCTCTGCTCCACCATGGGTACCTCTGACACCAGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | TCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGGCCCTGTGGAGAGCCAGCATGTaGTACTTGCAGGCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKSMAWPALGWASKLEALWRASM*YLQALE Trigger: CTCCAGTGCCTGCAAGTACAACATGCTGGCTCTCCA...CAGGGCCTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 90 bp | GAGAGCTGCACAGCGTGGAGAGGACAGGTACTTGGGCAGGAAAGGTaGAGCGATGACACTCCACGCATCTGTCACAGGGCTGTAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ESCTAWRGQVLGQER*SDDTPRICHRAVAL Trigger: CAGTGCTACAGCCCTGTGACAGATGCGTGGAGTGTCATCGCTTCACCTTTCCTGCCCAAGTACCTGTCCTCTCCACGCTGTGCAGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | CAGCTGCCCCACCATAGCCGGCTCCACGTCTCGCAGTTCCACACGTaGCAAGAAGCTCTCAGTGAAGTCTCCAGCAAACATGGCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLPHHSRLHVSQFHT*QEALSEVSSKHGME Trigger: TTCCATGCCATGTTTGCTGGAGACTTCACTGAGAGCTTCTTGGCACGTGTGGAACTGCGAGACGTGGAGCCGGCTATGGTGGGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | TTACAGTGTCGTAGGCCTCCATCTCCACATGGTAGTCTCCATCCATaGCTTGCCAGCGGCCACCCGTCACATACAGCAGGTCACCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQCRRPPSPHGSLHP*LASGHPSHTAGHPE Trigger: CTCTGGGTGACCTGCTGTATGTGACGGGTGGCCGCTGGCAAGGCATGGATGGAGACTACCATGTGGAGATGGAGGCCTACGACACTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTCCATCAGATGTTAGCTCCACCCCATCTCAGCATATCCCCGGAAGCAAGCAAGTTGCTGACATACTaGGGCGCCGGGCCGACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVHQMLAPPHLSISPEASKLLTY*GAGPTG Trigger: TCCCGTCGGCCCGGCGCCCAAGTATGTCAGCAACTT...GCTTGCTTCCGGGGATATGCTGAGATGGGGTGGAGCTAACATCTGATGGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | TCCCCAAACTCGCAGATGCCCAGACAGTTAGTAGCATCCAGCTGCTaGTGGAGGTATCGGCCGCAGACCTTCTGTACAGTGGGGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPNSQMPRQLVASSC*WRYRPQTFCTVGKF Trigger: GAACTTCCCCACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGCTACTAACTGTCTGGGCATCTGCGAGTTTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 90 bp | TGTTCCCCAAACTCGCAGATGCCCAGACAGTTAGTAGCATCCAGCTaGTGCTGGAGGTATCGGCCGCAGACCTTCTGTACAGTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSPNSQMPRQLVASS*CWRYRPQTFCTVGK Trigger: CTTCCCCACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGCTACTAACTGTCTGGGCATCTGCGAGTTTGGGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 90 bp | CCAAACTCGCAGATGCCCAGACAGTTAGTAGCATCCAGCTGCTGCTaGAGGTATCGGCCGCAGACCTTCTGTACAGTGGGGAAGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNSQMPRQLVASSCC*RYRPQTFCTVGKFR Trigger: CCTGAACTTCCCCACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGCTACTAACTGTCTGGGCATCTGCGAGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAAGAGCATGGCATGGCCTGCTCTAGGCTGGGCCTCCAAGCTTGAGACCTTCTGCCACAGGTaGGCCCCAGGATCATACACA | + |
|
Preference number: 5 (lower is better) Translates to: TWSKSMAWPALGWASKLETFCHR*APGSYT Trigger: TGTGTATGATCCTGGGGCCAACCTGTGGCAGAAGGT...CTCAAGCTTGGAGGCCCAGCCTAGAGCAGGCCATGCCATGCTCTTTGACCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | CACAGTGATAGTTCTTTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGCCGACTCTGCTCCGGTaGTACCTGCAGCAGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSDSSLLFVWLQIWCLVWPTLLR*YLQQVA Trigger: AGCGACCTGCTGCAGGTACAACCGGAGCAGAGTCGG...CCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAAAGAACTATCACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS-3UTR CAA 90 bp | TTATTGTTTGTCTGGTTACAAATCTGGTGCCTCGTCTGGAGGAGAGCAAGAGGGCAAGAATTCATCCTCTaGGGCCACCGCCTCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLFVWLQIWCLVWRRARGQEFIL*GHRLKV Trigger: AACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTG...CCCTCTTGCTCTCCTCCAGACGAGGCACCAGATTTGTAACCAGACAAACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 90 bp | ATGGCGCACCCAGCGCAGCAGGGCCTCGAGCCGACTCTGCTCCGGTaGTACCTGCAGCAGGTCGCTGGCCAGACAGGTAGCCAGCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MAHPAQQGLEPTLLR*YLQQVAGQTGSQPV Trigger: GACCGGCTGGCTACCTGTCTGGCCAGCGACCTGCTGCAGGTACAACCGGAGCAGAGTCGGCTCGAGGCCCTGCTGCGCTGGGTGCGCCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | TGGCGCACCCAGCGCAGCAGGGCCTCGAGCCGACTCTaGTCCGGTTGTACCTGCAGCAGGTCGCTGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WRTQRSRASSRL*SGCTCSRSLAR Trigger: TCTGGCCAGCGACCTGCTGCAGGTACAACCGGAGCAGAGTCGGCTCGAGGCCCTGCTGCGCTGGGTGCGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | GGTGACAGGGCAGCTCCTGGTCCCCGACCAGCAGTGTaGCATCGGCCAGCTTGGGCAGGGAGCGCAGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDRAAPGPRPAV*HRPAWAGSADA Trigger: AGCGTCTGCGCTCCCTGCCCAAGCTGGCCGATGTCACACTGCTGGTCGGGGACCAGGAGCTGCCCTGTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | GCCCACCAGGTAGAGGCGGCCTTGGCAGCCAGCAGCTaGGAAGTTGCTGACATACTTGGGCGCCGGGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: AHQVEAALAASS*EVADILGRRAD Trigger: GTCGGCCCGGCGCCCAAGTATGTCAGCAACTTCTCAGCTGCTGGCTGCCAAGGCCGCCTCTACCTGGTGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | AACTGTTGCACGCAGGGCCTAGGCACGGCATCCAGGTaGACTAGGCTGAGGAGCTCGGGCAGGTGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NCCTQGLGTASR*TRLRSSGRWAA Trigger: GGCTGCCCACCTGCCCGAGCTCCTCAGCCTAGTGCACCTGGATGCCGTGCCTAGGCCCTGCGTGCAACAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | CGTGAGGCGGAGCGGGTCAGCGCCTCCACGTTAGCCTaGGTGATGGTCAACCGGCCCGTGTACACGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: REAERVSASTLA*VMVNRPVYTKS Trigger: GGACTTCGTGTACACGGGCCGGTTGACCATCACTCAGGCTAACGTGGAGGCGCTGACCCGCTCCGCCTCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | GCCGCAGACCTTCTGTACAGTGGGGAAGTTCAGGCGTaGGGCGGAGCGGGTCAGCGCCTCCACGTTAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AADLLYSGEVQA*GGAGQRLHVSL Trigger: CAGGCTAACGTGGAGGCGCTGACCCGCTCCGCCTCACGCCTGAACTTCCCCACTGTACAGAAGGTCTGCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | GGAAGCTCCTCACTGTGGCCCTGGGACAGGGCCTCCTaGCACGCCTCTGACTCCTGGATCAGTGGCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSLWPWDRAS*HASDSWISGSV Trigger: CACGGAGCCACTGATCCAGGAGTCAGAGGCGTGTCAGGAGGCCCTGTCCCAGGGCCACAGTGAGGAGCTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | GCTGCTGGAGGTATCGGCCGCAGACCTTCTGTACAGTaGGGAAGTTCAGGCGTGAGGCGGAGCGGGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: AAGGIGRRPSVQ*GSSGVRRSGSA Trigger: CGCTGACCCGCTCCGCCTCACGCCTGAACTTCCCCACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 72 bp | CCTTGGCAGCCAGCAGCTGAGAAGTTGCTGACATACTaGGGCGCCGGGCCGACGGGAGCCCAACTGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWQPAAEKLLTY*GAGPTGAQLSV Trigger: CACGGACAGTTGGGCTCCCGTCGGCCCGGCGCCCAAGTATGTCAGCAACTTCTCAGCTGCTGGCTGCCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | ATGGTCAACCGGCCCGTGTACACGAAGTCCACCAGCTaGCCCACCATAGCCGGCTCCACGTCTCGCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MVNRPVYTKSTS*PTIAGSTSRSS Trigger: GGAACTGCGAGACGTGGAGCCGGCTATGGTGGGGCAGCTGGTGGACTTCGTGTACACGGGCCGGTTGACCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | GACTCCTGGATCAGTGGCTCCGTGGCGAGCAACTGTTaGACGCAGGGCCTAGGCACGGCATCCAGGTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: DSWISGSVASNC*TQGLGTASRCT Trigger: AGTGCACCTGGATGCCGTGCCTAGGCCCTGCGTGCAACAGTTGCTCGCCACGGAGCCACTGATCCAGGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | TCCAGCGCCCGTCCTCCAACGACCACCAGCACCTCCTaGATCTTCTGTGGGAGGCCAGGAAGCTCCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SSARPPTTTSTS*IFCGRPGSSSL Trigger: CAGTGAGGAGCTTCCTGGCCTCCCACAGAAGATGCAGGAGGTGCTGGTGGTCGTTGGAGGACGGGCGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | GTGACATCGGCCAGCTTGGGCAGGGAGCGCAGACGCTaGAGGCCTTCCAGCATGTCTTGGGCATGTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VTSASLGRERRR*RPSSMSWACEG Trigger: GCCTTCACATGCCCAAGACATGCTGGAAGGCCTTCAGCGTCTGCGCTCCCTGCCCAAGCTGGCCGATGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | AGCACTGGAGAGCCAGCATGTTGTACTTGCAGGCACTaGAGCCCACCAGGTAGAGGCGGCCTTGGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: STGEPACCTCRH*SPPGRGGLGSQ Trigger: CTGGCTGCCAAGGCCGCCTCTACCTGGTGGGCTCCAGTGCCTGCAAGTACAACATGCTGGCTCTCCAGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 72 bp | GGCCTCCATCTCCACATGGTAGTCTCCATCCATGCCTaGCCAGCGGCCACCCGTCACATACAGCAGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLHLHMVVSIHA*PAATRHIQQVT Trigger: GGTGACCTGCTGTATGTGACGGGTGGCCGCTGGCAAGGCATGGATGGAGACTACCATGTGGAGATGGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 90 bp | AGTGTCGTAGGCCTCCATCTCCACATGGTAGTCTCCATCCATGCCTaGCCAGCGGCCACCCGTCACATACAGCAGGTCACCCAGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVVGLHLHMVVSIHA*PAATRHIQQVTQRH Trigger: GTGCCTCTGGGTGACCTGCTGTATGTGACGGGTGGCCGCTGGCAAGGCATGGATGGAGACTACCATGTGGAGATGGAGGCCTACGACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | CTGGCCAGACAGGTAGCCAGCCGGTCTCTTGCCAGCTaGAAGAATTCATCCTCTTGGGCCACCGCCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LARQVASRSLAS*KNSSSWATASK Trigger: CTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCTGGCTACCTGTCTGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | ACTGTCCGTGTAGGGATCATAGCGCTCTACCTCCACTaGGTCCAGGGCGGTGCCACCGATGGCATAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVRVGIIALYLH*VQGGATDGIDL Trigger: GAGATCTATGCCATCGGTGGCACCGCCCTGGACGCAGTGGAGGTAGAGCGCTATGATCCCTACACGGACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | CGTAGGCCTCCATCTCCACATGGTAGTCTCCATCCATaGCTTGCCAGCGGCCACCCGTCACATACAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRPPSPHGSLHP*LASGHPSHTAG Trigger: ACCTGCTGTATGTGACGGGTGGCCGCTGGCAAGGCATGGATGGAGACTACCATGTGGAGATGGAGGCCTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 90 bp | ACAGGTAGCCAGCCGGTCTCTTGCCAGCTGCAAGAATTCATCCTCTaGGGCCACCGCCTCAAAGTTCTCCCGCAGGAAAGCCCAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TGSQPVSCQLQEFIL*GHRLKVLPQESPGF Trigger: AAAGCCTGGGCTTTCCTGCGGGAGAACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCTGGCTACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | CAGATGCCCAGACAGTTAGTAGCATCCAGCTGCTGCTaGAGGTATCGGCCGCAGACCTTCTGTACAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QMPRQLVASSCC*RYRPQTFCTVG Trigger: CCCCACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGCTACTAACTGTCTGGGCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | AGCCGGTCTCTTGCCAGCTGCAAGAATTCATCCTCTTaGGCCACCGCCTCAAAGTTCTCCCGCAGGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSLASCKNSSS*ATASKFSRRKA Trigger: GGCTTTCCTGCGGGAGAACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | TGGTGTTGTAGAAAGCAAAGTTCCCAGTGTGGTGGCTaGGTTCCTCACCACCGTCCTCGTCCTCCTCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: WCCRKQSSQCGG*VPHHRPRPPPA Trigger: CGCTGGAGGAGGACGAGGACGGTGGTGAGGAACCCAGCCACCACACTGGGAACTTTGCTTTCTACAACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | CAGGGAAGTCCGGGAGTGCCATCCACTGCCTGGCCTTaGTGTTGTAGAAAGCAAAGTTCCCAGTGTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSPGVPSTAWP*CCRKQSSQCGG Trigger: GCCACCACACTGGGAACTTTGCTTTCTACAACACCAAGGCCAGGCAGTGGATGGCACTCCCGGACTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 72 bp | CAGCCGGTCTCTTGCCAGCTGCAAGAATTCATCCTCTaGGGCCACCGCCTCAAAGTTCTCCCGCAGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPVSCQLQEFIL*GHRLKVLPQES Trigger: GCTTTCCTGCGGGAGAACTTTGAGGCGGTGGCCCAAGAGGATGAATTCTTGCAGCTGGCAAGAGACCGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | ACAGCGTGGAGAGGACAGGTACTTGGGCAGGAAAGGTaGAGCGATGACACTCCACGCATCTGTCACAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TAWRGQVLGQER*SDDTPRICHRA Trigger: AGCCCTGTGACAGATGCGTGGAGTGTCATCGCTTCACCTTTCCTGCCCAAGTACCTGTCCTCTCCACGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | TCGCAGATGCCCAGACAGTTAGTAGCATCCAGCTGCTaGTGGAGGTATCGGCCGCAGACCTTCTGTACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SQMPRQLVASSC*WRYRPQTFCTV Trigger: CACTGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGCTACTAACTGTCTGGGCATCTGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | AAAGCCCAGGCTTTGGCAGCTACCCCTAGCAGGCCTTaGTGTTCCCCAAACTCGCAGATGCCCAGACAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: KAQALAATPSRP*CSPNSQMPRQL Trigger: TAACTGTCTGGGCATCTGCGAGTTTGGGGAACAGCAAGGCCTGCTAGGGGTAGCTGCCAAAGCCTGGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | GAAGCCCCACTTGTGGTAATCAGGGAAGTCCGGGAGTaGCATCCACTGCCTGGCCTTGGTGTTGTAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EAPLVVIREVRE*HPLPGLGVVES Trigger: GCTTTCTACAACACCAAGGCCAGGCAGTGGATGGCACTCCCGGACTTCCCTGATTACCACAAGTGGGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | CACCGATGGCATAGATCTCTCCATTCAGCGCTGTACTaGCATGGTTCGTACGGGCCTTCAGCATGGGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRWHRSLHSALY*HGSYGPSAWVP Trigger: TGGCACCCATGCTGAAGGCCCGTACGAACCATGCCAGTACAGCGCTGAATGGAGAGATCTATGCCATCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CCA 72 bp | CATTTGGAGACATCCAGAAAGATGGTAGAGGCCCCATaGTACAGCCAGAGACGGGGTAGAGAGCCATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HLETSRKMVEAP*YSQRRGREPWR Trigger: CCGCCATGGCTCTCTACCCCGTCTCTGGCTGTACCATGGGGCCTCTACCATCTTTCTGGATGTCTCCAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS CAA 90 bp | TACAGGGCTCCATTGAGAGCTGCACAGCGTGGAGAGGACAGGTACTaGGGCAGGAAAGGTGAAGCGATGACACTCCACGCATCTGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: YRAPLRAAQRGEDRY*GRKGEAMTLHASVT Trigger: TGTGACAGATGCGTGGAGTGTCATCGCTTCACCTTTCCTGCCCAAGTACCTGTCCTCTCCACGCTGTGCAGCTCTCAATGGAGCCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | CGTCTCGCAGTTCCACACGTGCCAAGAAGCTCTCAGTaGAGTCTCCAGCAAACATGGCATGGAAGTAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLAVPHVPRSSQ*SLQQTWHGSRG Trigger: GCCCCTACTTCCATGCCATGTTTGCTGGAGACTTCACTGAGAGCTTCTTGGCACGTGTGGAACTGCGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS TCA 72 bp | CTGGGTGGTCGACCAGGTATCTGTTTTGGTGCCCCGTaGGCCACCTGTGACGTAAACATCACTGTTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGGRPGICFGAP*ATCDVNITVEC Trigger: GCACTCAACAGTGATGTTTACGTCACAGGTGGCTCACGGGGCACCAAAACAGATACCTGGTCGACCACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
||
| CDS GCA 72 bp | CACCATAGCCGGCTCCACGTCTCGCAGTTCCACACGTaGCAAGAAGCTCTCAGTGAAGTCTCCAGCAAACAT | + |
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Preference number: 6 (lower is better) Translates to: HHSRLHVSQFHT*QEALSEVSSKH Trigger: ATGTTTGCTGGAGACTTCACTGAGAGCTTCTTGGCACGTGTGGAACTGCGAGACGTGGAGCCGGCTATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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| CDS GCA 72 bp | AACTCGCAGATGCCCAGACAGTTAGTAGCATCCAGCTaGTGCTGGAGGTATCGGCCGCAGACCTTCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: NSQMPRQLVASS*CWRYRPQTFCT Trigger: TGTACAGAAGGTCTGCGGCCGATACCTCCAGCAGCAGCTGGATGCTACTAACTGTCTGGGCATCTGCGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027533.9 |
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