Pregenerated sensors for KLHL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014164Ensembl transcript IDs: ENSMUST00000160860.9
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGTTGTCGAACCACGGCAGAGCCTCCCAGCTCCTCTCCTCACTTaGTGTGGTCCTGTTGCCACGGGCAGTGGCCTGCAGCTTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: VVVEPRQSLPAPLLT*CGPVATGSGLQLLP Trigger: GGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCTGGGAGGCTCTGCCGTGGTTCGACAACCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | CCCAGCTCCTCTCCTCACTTGCTGTGGTCCTGTTGCCACGGGCAGTaGCCTGCAGCTTCTTCCCCTACCTCCTGGCTGAGGGAGTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: PSSSPHLLWSCCHGQ*PAASSPTSWLREFG Trigger: CCCAAACTCCCTCAGCCAGGAGGTAGGGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | TGTCGAACCACGGCAGAGCCTCCCAGCTCCTCTCCTCACTTGCTGTaGTCCTGTTGCCACGGGCAGTGGCCTGCAGCTTCTTCCCCTACC | + |
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Preference number: 1 (lower is better) Translates to: CRTTAEPPSSSPHLL*SCCHGQWPAASSPT Trigger: GGTAGGGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCTGGGAGGCTCTGCCGTGGTTCGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | CCTAGAGTCCAGTCAAGGAGGAGGCAGCGGCCCAGGGAGAGGCCGTaGAGCAGCTTTGAGGAAGCCCCTGCTCTTCCACACAACCGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PRVQSRRRQRPRERP*SSFEEAPALPHNRS Trigger: ACTGCGGTTGTGTGGAAGAGCAGGGGCTTCCTCAAAGCTGCTCCACGGCCTCTCCCTGGGCCGCTGCCTCCTCCTTGACTGGACTCTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | GCTCTGCCTGCAGAGCCAGCGCTTCACAGGGAGGGAGGCACAAAGTaGAACCCACAGCAAAAACTCCAGCAGAAACCGGGGCTGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: ALPAEPALHREGGTK*NPQQKLQQKPGLAS Trigger: GCTGGCCAGCCCCGGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGAAGCGCTGGCTCTGCAGGCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR GCA 90 bp | TATTCCTGCAGATGCCGCAGCCCCGTGCGTTCCTGCTTCGGCTGCTaGTACAGCCCGGAGTCTCTGAGTCCCACAGTAAAGGCTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: YSCRCRSPVRSCFGC*YSPESLSPTVKAAQ Trigger: CTGTGCAGCCTTTACTGTGGGACTCAGAGACTCCGGGCTGTAGCAGCAGCCGAAGCAGGAACGCACGGGGCTGCGGCATCTGCAGGAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | CCTTACCTTCACAGCTCACACCTCAAACAAGTCCCCAGACTTGCCTaGAAAGGGAGGGAGGGCGTGGGGAACGCACTCAGTGGTAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: PYLHSSHLKQVPRLA*KGREGVGNALSGRA Trigger: AGCTCTACCACTGAGTGCGTTCCCCACGCCCTCCCTCCCTTTCCAGGCAAGTCTGGGGACTTGTTTGAGGTGTGAGCTGTGAAGGTAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR GCA 90 bp | AGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGCTaGTGGGACTTGAACTCAGGACCTCTGCAAGAGCAGTCGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDPITDGCEPPCG*WDLNSGPLQEQSVL Trigger: GAGCACCGACTGCTCTTGCAGAGGTCCTGAGTTCAAGTCCCAGCAGCCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR TCA 90 bp | ATCAGTGTCCACATGAAGAAGAAGGAGGTTGGTCTGCTGAGACAATaGGGGTGGTTGTCGAACCACGGCAGAGCCTCCCAGCTCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ISVHMKKKEVGLLRQ*GWLSNHGRASQLLS Trigger: GGAGAGGAGCTGGGAGGCTCTGCCGTGGTTCGACAACCACCCTCATTGTCTCAGCAGACCAACCTCCTTCTTCTTCATGTGGACACTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | GCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGCTGCTaGGACTTGAACTCAGGACCTCTGCAAGAGCAGTCGGTGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPPCGC*DLNSGPLQEQSVLF Trigger: GAAGAGCACCGACTGCTCTTGCAGAGGTCCTGAGTTCAAGTCCCAGCAGCCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR GCA 90 bp | CACACAACCGCAGTAGTCAAGTCATGGTCCCAGACGTGGTCGGAGTaGTGCTTTTGGCTAGTTCTCTCTGGACCTCCAGAAGACAGCATC | + |
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Preference number: 1 (lower is better) Translates to: HTTAVVKSWSQTWSE*CFWLVLSGPPEDSI Trigger: GATGCTGTCTTCTGGAGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTTGACTACTGCGGTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR GCA 90 bp | CCTAACTCCTGCGTAACATTAGAGAGGTTCACCCTCATGGAGGGGTaGTCAGTAAATACTCAGTGGCTGCCTAGCTGGGGAGACGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PNSCVTLERFTLMEG*SVNTQWLPSWGDAS Trigger: GGAAGCGTCTCCCCAGCTAGGCAGCCACTGAGTATTTACTGAGCACCCCTCCATGAGGGTGAACCTCTCTAATGTTACGCAGGAGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | TTGAGGAAGCCCCTGCTCTTCCACACAACCGCAGTAGTCAAGTCATaGTCCCAGACGTGGTCGGAGTGCTGCTTTTGGCTAGTTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LRKPLLFHTTAVVKS*SQTWSECCFWLVLS Trigger: AGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTTGACTACTGCGGTTGTGTGGAAGAGCAGGGGCTTCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | GCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTGGAGAATaGGCAAGGTCTGCAGGATCCAGGCCACCTAGGGAGTGTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: ALNTKNLQKQGDTGE*ARSAGSRPPRECGP Trigger: AGGCCCACACTCCCTAGGTGGCCTGGATCCTGCAGACCTTGCCCATTCTCCAGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR TCA 90 bp | ACTCCTGACCTATGGGCAAACCTATCTCTGGGTCGAGTGGCAGGGTaGCCTTTCACTTATCCTCTGACACCGTGGATAAGTAGGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: TPDLWANLSLGRVAG*PFTYPLTPWISRPA Trigger: TGCAGGCCTACTTATCCACGGTGTCAGAGGATAAGTGAAAGGTCACCCTGCCACTCGACCCAGAGATAGGTTTGCCCATAGGTCAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR GCA 90 bp | ACAACCGCAGTAGTCAAGTCATGGTCCCAGACGTGGTCGGAGTGCTaGTTTTGGCTAGTTCTCTCTGGACCTCCAGAAGACAGCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: TTAVVKSWSQTWSEC*FWLVLSGPPEDSIC Trigger: ACAGATGCTGTCTTCTGGAGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTTGACTACTGCGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR GCA 90 bp | CACACACACACACACACACACACACAAAGTGTTCCCAAATGTGCATaGCCTAGGGTGCTGCTGGGGCTGTCAGGAACTCAACTGTTTAGG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTQSVPKCA*PRVLLGLSGTQLFR Trigger: CCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CCA 90 bp | CACACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGGTGCTGCTaGGGCTGTCAGGAACTCAACTGTTTAGGACAGAATCCAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: HTHKVFPNVHALGCC*GCQELNCLGQNPKH Trigger: GTGCTTTGGATTCTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR TCA 90 bp | CTTGAACTCAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTaGGTCATCTCTCTAGCCCCATCACTTTCTTCTTTTGCTTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LELRTSARAVGALHH*VISLAPSLSSFACL Trigger: CAAGCAAGCAAAAGAAGAAAGTGATGGGGCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTGAGTTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR TCA 90 bp | GGAACGCAAGCTTCCCAAAGAAACAGGACCCAGTCAAGGAGGCCCTaGATACTAAAAACCTCCAAAAGCAAGGAGACACTGGAGAATGGG | + |
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Preference number: 1 (lower is better) Translates to: GTQASQRNRTQSRRP*ILKTSKSKETLENG Trigger: CCCATTCTCCAGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTCCTGTTTCTTTGGGAAGCTTGCGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR TCA 90 bp | CAGAAAATACCAGATCAAGGACTTTACCCGTGCCTGTGTCCAGTCTaGCGGCCCATATCCAGCAGAGAGCCAGAATATTCACAGAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: QKIPDQGLYPCLCPV*RPISSREPEYSQRD Trigger: ATCTCTCTGTGAATATTCTGGCTCTCTGCTGGATATGGGCCGTCAGACTGGACACAGGCACGGGTAAAGTCCTTGATCTGGTATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR TCA 90 bp | GATGCTGTTGGGTACTTAGAAGAAATGACTTTGGAGTTCAGAAGCTaGCTTCCGCTGTCCGAATCAGCATCCGAGTGGTGTCTAATCTGC | + |
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Preference number: 1 (lower is better) Translates to: DAVGYLEEMTLEFRS*LPLSESASEWCLIC Trigger: GCAGATTAGACACCACTCGGATGCTGATTCGGACAGCGGAAGTCAGCTTCTGAACTCCAAAGTCATTTCTTCTAAGTACCCAACAGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCGCAGCCCCGTGCGTTCCTGCTTCGGCTGCTGCTACAGCCCGGAGTCTCTGAGAACCATTGCCGCGTaGGCCAACCCAGCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CRSPVRSCFGCCYSPESLRTIAA*ANPALQ Trigger: CTGCAGGGCTGGGTTGGCCCACGCGGCAATGGTTCT...CAGAGACTCCGGGCTGTAGCAGCAGCCGAAGCAGGAACGCACGGGGCTGCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CAA 90 bp | GGTGGTTGTCGAACCACGGCAGAGCCTCCCAGCTCCTCTCCTCACTaGCTGTGGTCCTGTTGCCACGGGCAGTGGCCTGCAGCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GGCRTTAEPPSSSPH*LWSCCHGQWPAASS Trigger: GGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCTGGGAGGCTCTGCCGTGGTTCGACAACCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CAA 90 bp | AGTCAAGGAGGAGGCAGCGGCCCAGGGAGAGGCCGTGGAGCAGCTTaGAGGAAGCCCCTGCTCTTCCACACAACCGCAGTAGTCAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SQGGGSGPGRGRGAA*RKPLLFHTTAVVKS Trigger: TGACTTGACTACTGCGGTTGTGTGGAAGAGCAGGGGCTTCCTCAAAGCTGCTCCACGGCCTCTCCCTGGGCCGCTGCCTCCTCCTTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CAA 90 bp | CGTAAGTCCCTGGGAACTAAGAAAGGAAGCCCCGCGACGGGCGTCTaGGAAGTCAGTCACCTTCCTAGACCACTGAGGGCCCGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RKSLGTKKGSPATGV*EVSHLPRPLRARSS Trigger: TGAGCTCCGGGCCCTCAGTGGTCTAGGAAGGTGACTGACTTCCAAGACGCCCGTCGCGGGGCTTCCTTTCTTAGTTCCCAGGGACTTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACAGCCGTGGAGCAGCTTTaGGGAAGCCCCTGCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GKQDRGKTWIQASLTVLTAVEQL*GSPCSS Trigger: GGAAGAGCAGGGGCTTCCTCAAAGCTGCTCCACGGC...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCCACACGAGTGTGAAATaGGTGAAGCCCTCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QGERQRQDSSRRTLLGVSHTSVK*VKPSAA Trigger: AGCTGCTGAGGGCTTCACTCATTTCACACTCGTGTG...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCCATGCCCTAGGGTGCTaGTGGGGCTGTCAGGAACTC | + |
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Preference number: 2 (lower is better) Translates to: QDLCKSSRCSSPLSHLSSHALGC*WGCQEL Trigger: GAGTTCCTGACAGCCCCAGCAGCACCCTAGGGCATG...GCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACATGTTGCCACGGGCAGTaGCCTGCAGCTTCTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GKQDRGKTWIQASLTVLTCCHGQ*PAASSP Trigger: AGGGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACA...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCTGCTGGGGCTGTCAGGAACTCAACTGTTTAGGACAGAATCCAAAGCACTCTCCTCACTTGCTGTaGTCCTGTTGCCACGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GCCWGCQELNCLGQNPKHSPHLL*SCCHGQ Trigger: CTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGA...GTGCTTTGGATTCTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCGCTTCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCATATATGGCCACTCCTaGCCTATGGGCAAACCTATC | + |
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Preference number: 2 (lower is better) Translates to: SQRFTGREAQSGTHSKNSIYGHS*PMGKPI Trigger: GATAGGTTTGCCCATAGGTCAGGAGTGGCCATATAT...GGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGAAGCGCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCGCCCTAGGGTGCTGCTaGGGCTGTCAGGAACTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LNSILSLSLGFRCAPWQGALGCC*GCQELN Trigger: GTTGAGTTCCTGACAGCCCCAGCAGCACCCTAGGGC...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR GCA 90 bp | TCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCAGCCAAGAAAATGTTTaGATCCCTCCCTTGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SQGGRHKVEPTAKTPAETSQENV*IPPLGD Trigger: GTCTCCCAAGGGAGGGATGCAAACATTTTCTTGGCT...GGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTCCACCATGTGGCTGCTaGGACTTGAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: DPVKEALNTKNLQKQGDTPPCGC*DLNSGP Trigger: AGGTCCTGAGTTCAAGTCCCAGCAGCCACATGGTGG...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCACAGAGAGATTCTCGTTCCATGCCTTGGGTTTTCTTTCAAAGAAGATATTGTCTGCTCTGCCAGGTaGGGGGTGGGAAGGCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: IHREILVPCLGFSFKEDIVCSAR*GVGRLR Trigger: GCGGAGCCTTCCCACCCCTCACCTGGCAGAGCAGAC...AATATCTTCTTTGAAAGAAAACCCAAGGCATGGAACGAGAATCTCTCTGTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACAGAATCCATGTTGCTTTaGTGTCTTCTGTCTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GKQDRGKTWIQASLTVLTESMLL*CLLSVC Trigger: ACAGACAGACAGAAGACACCAAAGCAACATGGATTC...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | TCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCAATAGTCTTGATCTGTaGCTGAGCAGAGCTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SQGGRHKVEPTAKTPAETNSLDL*LSRAFL Trigger: CAGGAAAGCTCTGCTCAGCCACAGATCAAGACTATT...GGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCAAAAGTCTGGGTTCTTaGTGGGAGTGGGAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LNSILSLSLGFRCAPWQGKSLGS*WEWERV Trigger: CACCCTCTCCCACTCCCACCAAGAACCCAGACTTTT...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTAGGTCTGCTGAGACAATaGGGGTGGTTGTCGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLGLLRQ*GWLSNH Trigger: GTGGTTCGACAACCACCCTCATTGTCTCAGCAGACC...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCCATCAGGTCAAACTATaGAGGCAAAACAGTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QDLCKSSRCSSPLSHLSSHQVKL*RQNSSH Trigger: ATGAGAACTGTTTTGCCTTCATAGTTTGACCTGATG...GCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCGCTGTGGGTAGATGCTaGATCCATGTTGCTTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LNSILSLSLGFRCAPWQGAVGRC*IHVALV Trigger: CACCAAAGCAACATGGATTCAGCATCTACCCACAGC...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR GCA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTGTATCTCCCAGTGTCTaGCTTCCCAGCTTTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: DPVKEALNTKNLQKQGDTVSPSV*LPSFKM Trigger: CATCTTAAAGCTGGGAAGGCAGACACTGGGAGATAC...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGTGGAGCAATAAGAAGTaGGTCATCAGTGTCCACATG | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTQSVPKCACPRWSNKK*VISVHM Trigger: CATGTGGACACTGATGACCCACTTCTTATTGCTCCA...CCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGGAATCCAAAGCACCTTaGAGCAATAAGAAGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTQSVPKCACPRESKAP*SNKKWV Trigger: GACCCACTTCTTATTGCTCCAAGGTGCTTTGGATTC...CCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR CCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATGTCCCCAGACTTGCCTaGAAAGGGAGGGAGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNVPRLA*KGREGV Trigger: CACGCCCTCCCTCCCTTTCCAGGCAAGTCTGGGGAC...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCACAGAGAGATTCTCGTTCCATGCCTTGGGTTTTCTTTCAAAGAAGATATTTTGCTGTGGTCCTGTTaGCACGGGCAGTGGCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IHREILVPCLGFSFKEDILLWSC*HGQWPA Trigger: TGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAA...AATATCTTCTTTGAAAGAAAACCCAAGGCATGGAACGAGAATCTCTCTGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACACTTCTTTTGCTTGCTTaGTTCCTTTTCTTATCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GKQDRGKTWIQASLTVLTLLLLA*FLFLSV Trigger: AACAGATAAGAAAAGGAAGCAAGCAAGCAAAAGAAG...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTATCGGAGTGCTGCTTTTaGCTAGTTCTCTCTGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLSECCF*LVLSGP Trigger: AGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGA...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTCAGCAACACAGGTCTTaGGGGAGGGTGGCATCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPQQHRS*GRVASV Trigger: CACAGATGCCACCCTCCCCCAAGACCTGTGTTGCTG...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAACAGCATTTCATTGTCATGGACGATAGAAAGCGATTCGAATGTCCTGGATCAGTAAATACTCAGTaGCTGCCTAGCTGGGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TEQHFIVMDDRKRFECPGSVNTQ*LPSWGD Trigger: GTCTCCCCAGCTAGGCAGCCACTGAGTATTTACTGA...TCCAGGACATTCGAATCGCTTTCTATCGTCCATGACAATGAAATGCTGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAACAGCATTTCATTGTCATGGACGATAGAAAGCGATTCGAATGTCCTGGACCACACAGTTTGTTTTaGAAGTCTCTCCCTGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TEQHFIVMDDRKRFECPGPHSLF*KSLPEA Trigger: AGCCTCAGGGAGAGACTTGCAAAACAAACTGTGTGG...TCCAGGACATTCGAATCGCTTTCTATCGTCCATGACAATGAAATGCTGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATAAGCAGGAAGAGGCATaGAGGCGGTTTAAATGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNKQEEA*RRFKWH Trigger: GTGCCATTTAAACCGCCTCCATGCCTCTTCCTGCTT...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATTCTCTTTTGGGATGGTaGTGCTGTTGGGTACTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNSLLGW*CCWVLR Trigger: TCTAAGTACCCAACAGCATCACCATCCCAAAAGAGA...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTCACAGAGAGATTCTCGTTCCATGCCTTGGGTTTTCTTTCAAAGAAGATATTAAACAGAACCTGGAATaGAGACAGCTCAAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: IHREILVPCLGFSFKEDIKQNLE*RQLKKE Trigger: TTCTTTCTTGAGCTGTCTTCATTCCAGGTTCTGTTT...AATATCTTCTTTGAAAGAAAACCCAAGGCATGGAACGAGAATCTCTCTGTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGCAGCCCCGTGCGTTCCTGCTTCGGCTGCTGCTACAGCCCGGAGTCTCTGAACAAGTCCCCAGACTaGCCTGGAAAGGGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CRSPVRSCFGCCYSPESLNKSPD*PGKGGR Trigger: CCTCCCTCCCTTTCCAGGCAAGTCTGGGGACTTGTT...CAGAGACTCCGGGCTGTAGCAGCAGCCGAAGCAGGAACGCACGGGGCTGCGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | TGTTCACTAGTGGTGGCTAGTGTCTGCTCTGCCAGGTaGGGGGTGGGAAGGCTCCGCCTAGGGCGCGCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CSLVVASVCSAR*GVGRLRLGRAL Trigger: TAGCGCGCGCCCTAGGCGGAGCCTTCCCACCCCTCACCTGGCAGAGCAGACACTAGCCACCACTAGTGAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | CCTCCCAGCTCCTCTCCTCACTTGCTGTGGTCCTGTTaGCACGGGCAGTGGCCTGCAGCTTCTTCCCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: PPSSSPHLLWSC*HGQWPAASSPT Trigger: GGTAGGGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCTGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | TCTCCTCACTTGCTGTGGTCCTGTTGCCACGGGCAGTaGCCTGCAGCTTCTTCCCCTACCTCCTGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPHLLWSCCHGQ*PAASSPTSWLR Trigger: CCTCAGCCAGGAGGTAGGGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | TCACTTGCTGTGGTCCTGTTGCCACGGGCAGTGGCCTaGAGCTTCTTCCCCTACCTCCTGGCTGAGGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLAVVLLPRAVA*SFFPYLLAEGV Trigger: AACTCCCTCAGCCAGGAGGTAGGGGAAGAAGCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | CACAGCTCACACCTCAAACAAGTCCCCAGACTTGCCTaGAAAGGGAGGGAGGGCGTGGGGAACGCACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HSSHLKQVPRLA*KGREGVGNALS Trigger: ACTGAGTGCGTTCCCCACGCCCTCCCTCCCTTTCCAGGCAAGTCTGGGGACTTGTTTGAGGTGTGAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | GCAGAGCCAGCGCTTCACAGGGAGGGAGGCACAAAGTaGAACCCACAGCAAAAACTCCAGCAGAAACCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AEPALHREGGTK*NPQQKLQQKPG Trigger: CCCCGGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGAAGCGCTGGCTCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | GGGGTGTTTCGGAGGCTGGGGAGAAGATACAGACCCTaGACTAGGAGGGAAGCAGGACAGAGGGAAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: GVFRRLGRRYRP*TRREAGQREDM Trigger: CATGTCTTCCCTCTGTCCTGCTTCCCTCCTAGTCCAGGGTCTGTATCTTCTCCCCAGCCTCCGAAACACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCCAGCCAAGAAAATGTTaGCATCCCTCCCTTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QGERQRQDSSRRTLLGVSQPRKC*HPSLGR Trigger: TCTCCCAAGGGAGGGATGCAAACATTTTCTTGGCTG...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | GAGGGGTGCTCAGTAAATACTCAGTGGCTGCCTAGCTaGGGAGACGCTTCCAAAGGCAGAGATGTCGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: EGCSVNTQWLPS*GDASKGRDVGQ Trigger: CTGTCCGACATCTCTGCCTTTGGAAGCGTCTCCCCAGCTAGGCAGCCACTGAGTATTTACTGAGCACCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGCAGCCCCGTGCGTTCCTGCTTCGGCTGCTGCTACAGCCCGGAGTCTCTGTCTTCTTTTGCTTGCTaGCTTCCTTTTCTTATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRSPVRSCFGCCYSPESLSSFAC*LPFLIC Trigger: ACAGATAAGAAAAGGAAGCAAGCAAGCAAAAGAAGA...CAGAGACTCCGGGCTGTAGCAGCAGCCGAAGCAGGAACGCACGGGGCTGCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | CACATGAAGAAGAAGGAGGTTGGTCTGCTGAGACAATaGGGGTGGTTGTCGAACCACGGCAGAGCCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HMKKKEVGLLRQ*GWLSNHGRASQ Trigger: CTGGGAGGCTCTGCCGTGGTTCGACAACCACCCTCATTGTCTCAGCAGACCAACCTCCTTCTTCTTCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | GCAGGGTCCCACTCTGAGGCCGCTGTGGGTAGATGCTaGATCCATGTTGCTTTGGTGTCTTCTGTCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGSHSEAAVGRC*IHVALVSSVCL Trigger: CAGACAGACAGAAGACACCAAAGCAACATGGATTCAGCATCTACCCACAGCGGCCTCAGAGTGGGACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | AGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTaGCCGTCCTCACAAAGTGCCAACGGCCAGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRTEGRHGYKHP*PSSQSANGQNS Trigger: GCTGTTCTGGCCGTTGGCACTTTGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | GACCAACCACCCTCCCAAAGAACGGCTCATCCGAAGTaGTGGGAACGCAAGCTTCCCAAAGAAACAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: DQPPSQRTAHPK*WERKLPKETGP Trigger: GGGTCCTGTTTCTTTGGGAAGCTTGCGTTCCCATCACTTCGGATGAGCCGTTCTTTGGGAGGGTGGTTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCTGTGGCTGCTGGGACTaGAACTCAGGACCTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQGGRHKVEPTAKTPAETCGCWD*NSGPLQ Trigger: TTGCAGAGGTCCTGAGTTCAAGTCCCAGCAGCCACA...GGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | CTAGTCCCCACACAAAAAGGACACACGAGTGTGAAATaGGTGAAGCCCTCAGCAGCTCTGCCTGCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVPTQKGHTSVK*VKPSAALPAEP Trigger: TGGCTCTGCAGGCAGAGCTGCTGAGGGCTTCACTCATTTCACACTCGTGTGTCCTTTTTGTGTGGGGACTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | GTAGTCAAGTCATGGTCCCAGACGTGGTCGGAGTGCTaGTTTTGGCTAGTTCTCTCTGGACCTCCAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVKSWSQTWSEC*FWLVLSGPPED Trigger: GTCTTCTGGAGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTTGACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | GCAGTAGTCAAGTCATGGTCCCAGACGTGGTCGGAGTaGTGCTTTTGGCTAGTTCTCTCTGGACCTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AVVKSWSQTWSE*CFWLVLSGPPE Trigger: TTCTGGAGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTTGACTACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGCTaGTGGGACTTGAACTCAGGACCTCTGCAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DPITDGCEPPCG*WDLNSGPLQEQ Trigger: CTGCTCTTGCAGAGGTCCTGAGTTCAAGTCCCAGCAGCCACATGGTGGCTCACAACCATCTGTAATGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | ACAGCTGGGAACCAGAGCAGCAGCCAAGAAAATGTTTaGATCCCTCCCTTGGGAGACCTTTCTTCTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TAGNQSSSQENV*IPPLGDLSSGS Trigger: GGACCCAGAAGAAAGGTCTCCCAAGGGAGGGATGCAAACATTTTCTTGGCTGCTGCTCTGGTTCCCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | AAGTCATGGTCCCAGACGTGGTCGGAGTGCTGCTTTTaGCTAGTTCTCTCTGGACCTCCAGAAGACAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: KSWSQTWSECCF*LVLSGPPEDSI Trigger: GATGCTGTCTTCTGGAGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | CCAGATCAAGGACTTTACCCGTGCCTGTGTCCAGTCTaGCGGCCCATATCCAGCAGAGAGCCAGAATATTCA | + |
|
Preference number: 3 (lower is better) Translates to: PDQGLYPCLCPV*RPISSREPEYS Trigger: TGAATATTCTGGCTCTCTGCTGGATATGGGCCGTCAGACTGGACACAGGCACGGGTAAAGTCCTTGATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | CACAAAGTGTTCCCAAATGTGCATGCCCTAGGGTGCTaGTGGGGCTGTCAGGAACTCAACTGTTTAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: HKVFPNVHALGC*WGCQELNCLGQ Trigger: CTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCCTAGGGCATGCACATTTGGGAACACTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | TGCGTAACATTAGAGAGGTTCACCCTCATGGAGGGGTaGTCAGTAAATACTCAGTGGCTGCCTAGCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CVTLERFTLMEG*SVNTQWLPSWG Trigger: TCCCCAGCTAGGCAGCCACTGAGTATTTACTGAGCACCCCTCCATGAGGGTGAACCTCTCTAATGTTACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCAGCTCCTCTCCTCACTaGCTGTGGTCCTGTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LNSILSLSLGFRCAPWQGSSSPH*LWSCCH Trigger: GTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCT...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACAGCTTATCTGAAGAGTTaGTTTTCCCTGCTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKQDRGKTWIQASLTVLTAYLKS*FSLLRR Trigger: CCTTCTCAGCAGGGAAAACAAACTCTTCAGATAAGC...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCGTTTGCATCCCTCCCTaGGGAGACCTTTCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LNSILSLSLGFRCAPWQGVCIPP*GDLSSG Trigger: CCCAGAAGAAAGGTCTCCCAAGGGAGGGATGCAAAC...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | CTATGGGCAAACCTATCTCTGGGTCGAGTGGCAGGGTaGCCTTTCACTTATCCTCTGACACCGTGGATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LWANLSLGRVAG*PFTYPLTPWIS Trigger: ACTTATCCACGGTGTCAGAGGATAAGTGAAAGGTCACCCTGCCACTCGACCCAGAGATAGGTTTGCCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | ACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGGTaGTGCTGGGGCTGTCAGGAACTCAACTGTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: THKVFPNVHALG*CWGCQELNCLG Trigger: TCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCCTAGGGCATGCACATTTGGGAACACTTTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | TCCCCATATGTCGGAAGTGCTGCTGGATTTTCTGCTTaGTCCGTAGATAACAGTGCAGCTGAACACAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SPYVGSAAGFSA*SVDNSAAEHKG Trigger: CCCCTTGTGTTCAGCTGCACTGTTATCTACGGAGCAAGCAGAAAATCCAGCAGCACTTCCGACATATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | GTGGGTCATCAGTGTCCACATGAAGAAGAAGGAGGTTaGTCTGCTGAGACAATGAGGGTGGTTGTCGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VGHQCPHEEEGG*SAETMRVVVEP Trigger: TGGTTCGACAACCACCCTCATTGTCTCAGCAGACCAACCTCCTTCTTCTTCATGTGGACACTGATGACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | AACAATCGAAAGCAGGGTCCCACTCTGAGGCCGCTGTaGGTAGATGCTGAATCCATGTTGCTTTGGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NNRKQGPTLRPL*VDAESMLLWCL Trigger: AAGACACCAAAGCAACATGGATTCAGCATCTACCCACAGCGGCCTCAGAGTGGGACCCTGCTTTCGATTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | CCAGTAGACACTCACACAGGTCCAGCCCCCACTGAATaGAATGTTTCACACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: PVDTHTGPAPTE*NVSHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGAAACATTTCATTCAGTGGGGGCTGGACCTGTGTGAGTGTCTACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | AGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTaGGTCATCTCTCTAGCCCCATCACTTTCTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RTSARAVGALHH*VISLAPSLSSF Trigger: AAAAGAAGAAAGTGATGGGGCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | ACATGGATACAAGCATCCCTGACCGTCCTCACAAAGTaGCAACGGCCAGAACAGCCAGTGTGTTTCTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TWIQASLTVLTK*QRPEQPVCFLE Trigger: TTCTAAGAAACACACTGGCTGTTCTGGCCGTTGGCACTTTGTGAGGACGGTCAGGGATGCTTGTATCCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | AAAGTGTTCCCAAATGTGCATGCCCTAGGGTGCTGCTaGGGCTGTCAGGAACTCAACTGTTTAGGACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KVFPNVHALGCC*GCQELNCLGQN Trigger: ATTCTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCCTAGGGCATGCACATTTGGGAACACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | GGGTACTTAGAAGAAATGACTTTGGAGTTCAGAAGCTaGCTTCCGCTGTCCGAATCAGCATCCGAGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GYLEEMTLEFRS*LPLSESASEWC Trigger: ACACCACTCGGATGCTGATTCGGACAGCGGAAGTCAGCTTCTGAACTCCAAAGTCATTTCTTCTAAGTACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | ATAAAAGTCTGGGTTCTTGGTGGGAGTGGGAGAGGGTaGGTTTACCTTTCACCTGAAATAGGGTGCTTATGC | + |
|
Preference number: 3 (lower is better) Translates to: IKVWVLGGSGRG*VYLSPEIGCLC Trigger: GCATAAGCACCCTATTTCAGGTGAAAGGTAAACCCACCCTCTCCCACTCCCACCAAGAACCCAGACTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACATACGAGTCCAAAAAGTaGTTTGTAGGAGTTTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GKQDRGKTWIQASLTVLTYESKK*FVGVLA Trigger: TGCTAAAACTCCTACAAACAACTTTTTGGACTCGTA...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCACAGAGAGATTCTCGTTCCATGCCTTGGGTTTTCTTTCAAAGAAGATATTGGCCGTGGAGCAGCTTaGAGGAAGCCCCTGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IHREILVPCLGFSFKEDIGRGAA*RKPLLF Trigger: GAAGAGCAGGGGCTTCCTCAAAGCTGCTCCACGGCC...AATATCTTCTTTGAAAGAAAACCCAAGGCATGGAACGAGAATCTCTCTGTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTTCTGTCTGTCTTTGCTaGCTCTCATTCTTCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPVKEALNTKNLQKQGDTSVCLC*LSFFLA Trigger: AGCAAGGAAGAATGAGAGCAAGCAAAGACAGACAGA...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR-3UTR CAA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTTCTGTCTGTCTGTCTTaGCTTGCTCTCATTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DPVKEALNTKNLQKQGDTSVCLS*LALILP Trigger: AGGAAGAATGAGAGCAAGCAAAGACAGACAGACAGA...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR TCA 72 bp | AGTAGCACACACACACACAGCCTACAAAAAGCACTCTaGTCTCCTTGCTTCCATTCATCAGAGCCTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSTHTHSLQKAL*SPCFHSSEPWM Trigger: CATCCAAGGCTCTGATGAATGGAAGCAAGGAGATCAGAGTGCTTTTTGTAGGCTGTGTGTGTGTGTGCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | GGGGTGAGCGACACACAGAACAGCATTTCATTGTCATaGACGATAGAAAGCGATTCGAATGTCCTGGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GVSDTQNSISLS*TIESDSNVLEN Trigger: GTTTTCCAGGACATTCGAATCGCTTTCTATCGTCCATGACAATGAAATGCTGTTCTGTGTGTCGCTCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | TGTGTAGAGGCCAAAGGTCAACCTTTAATGTTGGTCTaGAGGATCCACACAGTTTGTTTTGCAAGTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CVEAKGQPLMLV*RIHTVCFASLS Trigger: GGAGAGACTTGCAAAACAAACTGTGTGGATCCTGCAGACCAACATTAAAGGTTGACCTTTGGCCTCTACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR GCA 72 bp | CAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTaGCCCTTGGCAGGGCTGTATTCGCTAGTGTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: QFHFVTFVRFQM*PLAGLYSLVFT Trigger: AGTGAACACTAGCGAATACAGCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | ATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATaGTCCCTAACATCCACGCAGAAAATACCAGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: IVHVASVLFHGV*SLTSTQKIPDQ Trigger: TTGATCTGGTATTTTCTGCGTGGATGTTAGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CCA 72 bp | TTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATaGTGTATGGTCCCTAACATCCACGCAGAAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: LLYCSCGKCSFP*CMVPNIHAENT Trigger: GGTATTTTCTGCGTGGATGTTAGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | GGAGGCAGCGGCCCAGGGAGAGGCCGTGGAGCAGCTTaGAGGAAGCCCCTGCTCTTCCACACAACCGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGSGPGRGRGAA*RKPLLFHTTAV Trigger: TACTGCGGTTGTGTGGAAGAGCAGGGGCTTCCTCAAAGCTGCTCCACGGCCTCTCCCTGGGCCGCTGCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCGCGGATCGCCTTGGGTaGCTGGCCACCAACCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGERQRQDSSRRTLLGVSADRLG*LATNHN Trigger: ATTGTGGTTGGTGGCCAGGCACCCAAGGCGATCCGC...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGCGGCCGCACCCAGGGTaGTCCGGCGCTCCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTQSVPKCACPRRPHPG*SGAPAC Trigger: GCATGCAGGAGCGCCGGAGCACCCTGGGTGCGGCCG...CCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTGTGTGTGTGTGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | TGCCGCAGCCCCGTGCGTTCCTGCTTCGGCTGCTGCTACAGCCCGGAGTCTCTGTTCATGTCTGCCACCTaGTTCCAAGTGTTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRSPVRSCFGCCYSPESLFMSAT*FQVFVP Trigger: TGGGACAAACACTTGGAAGCAGGTGGCAGACATGAA...CAGAGACTCCGGGCTGTAGCAGCAGCCGAAGCAGGAACGCACGGGGCTGCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCCCCACGGCATACACGTaGCCTGCCATGAACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGERQRQDSSRRTLLGVSPTAYT*PAMNTT Trigger: TGTGGTGTTCATGGCAGGCCACGTGTATGCCGTGGG...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | GCGAGACTTCTACCTGATGATGCAGCAACACAGGTCTaGGGGGAGGGTGGCATCTGTGGGCAGCTAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLLPDDAATQV*GEGGICGQLGQ Trigger: CTGCCCTAGCTGCCCACAGATGCCACCCTCCCCCAAGACCTGTGTTGCTGCATCATCAGGTAGAAGTCTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | CTGGGAACTAAGAAAGGAAGCCCCGCGACGGGCGTCTaGGAAGTCAGTCACCTTCCTAGACCACTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTKKGSPATGV*EVSHLPRPLRA Trigger: GGCCCTCAGTGGTCTAGGAAGGTGACTGACTTCCAAGACGCCCGTCGCGGGGCTTCCTTTCTTAGTTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCTCTCCTCACTTGCTGTGGTCCTGTTGCCACGGGCAGTGGCCTGCAGCCGATCTTCTTGGCCTTaGTCTCAGACATGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSSLAVVLLPRAVACSRSSWP*SQTCHL Trigger: CAGGTGACATGTCTGAGAGCAAGGCCAAGAAGATCG...GCTGCAGGCCACTGCCCGTGGCAACAGGACCACAGCAAGTGAGGAGAGGAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCCATAGCTCCTCCCAGTaGTCATGTTGGTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGERQRQDSSRRTLLGVSHSSSQ*SCWWAA Trigger: TGCTGCCCACCAACATGAGCACTGGGAGGAGCTATG...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCACACGTGGCCTGCCATaGACACCACACCTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDLCKSSRCSSPLSHLSSTRGLP*TPHLLC Trigger: GCAGAGCAGGTGTGGTGTTCATGGCAGGCCACGTGT...GCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCGCTTCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCCGCACATCCATGAGCTaGAGCAAGCTGGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQRFTGREAQSGTHSKNSRTSMS*SKLAAG Trigger: TCCAGCAGCCAGCTTGCTGCAGCTCATGGATGTGCG...GGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGAAGCGCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCCCGTCAGCTTGTCGCTaGATATCAAGCTGCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: QGERQRQDSSRRTLLGVSPSACR*ISSCTP Trigger: AGGTGTGCAGCTTGATATCCAGCGACAAGCTGACGG...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACATCTGTCGCACATCCATaGGCTGCAGCAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKQDRGKTWIQASLTVLTSVAHP*AAASWL Trigger: CAGCCAGCTTGCTGCAGCTCATGGATGTGCGACAGA...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCGGGCTGCAGGAGGTCGGTaGACGTGTGCACATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGREAQSGTHSKNSSRNRAAGGR*TCAHLQ Trigger: TTGCAGATGTGCACACGTGCACCGACCTCCTGCAGC...CCGGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCGGCATACACGTGGCCTaGCATGAACACCACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDLCKSSRCSSPLSHLSSGIHVA*HEHHTC Trigger: GCAGGTGTGGTGTTCATGGCAGGCCACGTGTATGCC...GCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCCCCATCCACAGACCCCTGCGTTaGGCCGGCACATGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LCKSSRCSSPLSHLSSPIHRPLR*AGTCSC Trigger: ACATGAACATGTGCCGGCGCAACGCAGGGGTCTGTG...GATGGGGCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCGGCAGCAAGCTGGCTGCTaGAAGCAGCACCTGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGREAQSGTHSKNSSRNRQQAGC*KQHLHV Trigger: AACGTGCAGGTGCTGCTTCCAGCAGCCAGCTTGCTG...CCGGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGAAAGACAAAGGCAGGACAGCTCCAGGCGCACACTGCTAGGGGTGAGCTCAAGAGGCAGGAGGTaGTACTTCATGGCTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: QGERQRQDSSRRTLLGVSSRGRR*YFMASM Trigger: CATCGAAGCCATGAAGTACCACCTCCTGCCTCTTGA...GCTCACCCCTAGCAGTGTGCGCCTGGAGCTGTCCTGCCTTTGTCTTTCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCGGGCACGTGTGCACATCTaGAAAAGCTCGGATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGREAQSGTHSKNSSRNRARVHI*KSSDAQ Trigger: CTGGGCATCCGAGCTTTTGCAGATGTGCACACGTGC...CCGGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CCGCTGTGGGTAGATGCTGAATCCATGTTGCTTTGGTGTCTTCTGTCTGTCTGTCAACCCCAGCGCCACTaGGTCGGGTGCTCATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLWVDAESMLLWCLLSVCQPQRH*VGCSCL Trigger: CAGACATGAGCACCCGACGCAGTGGCGCTGGGGTTG...ACAGACAGACAGAAGACACCAAAGCAACATGGATTCAGCATCTACCCACAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGCAGGACAGAGGGAAGACATGGATACAAGCATCCCTGACCGTCCTCACAATCGCCTTGGGTGCCTaGCCACCAACCACAATCATG | + |
|
Preference number: 4 (lower is better) Translates to: GKQDRGKTWIQASLTVLTIALGA*PPTTIM Trigger: CATGATTGTGGTTGGTGGCCAGGCACCCAAGGCGAT...TGTGAGGACGGTCAGGGATGCTTGTATCCATGTCTTCCCTCTGTCCTGCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCCGCTGCGGATCGCCTTaGGTGCCTGGCCACCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LNSILSLSLGFRCAPWQGRCGSP*VPGHQP Trigger: TGGTTGGTGGCCAGGCACCCAAGGCGATCCGCAGCG...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGCTGCAGCAAGCTGGCTaGTGGAAGCAGCACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTQSVPKCACPRLQQAG*WKQHLH Trigger: GTGCAGGTGCTGCTTCCAGCAGCCAGCTTGCTGCAG...CCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCGCAATGGACGTCCACTaGTCCTTCACTCCATCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QDLCKSSRCSSPLSHLSSAMDVH*SFTPSY Trigger: GTACGATGGAGTGAAGGACCAGTGGACGTCCATTGC...GCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTGCTGGGGCTGTCAGGAACTCAACTGTTTAGGACAGAATCCAAAGCACTCCCAGTGCTCATGTTaGTGGGCAGCAGTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GCCWGCQELNCLGQNPKHSQCSC*WAAVST Trigger: AGTGGACACTGCTGCCCACCAACATGAGCACTGGGA...GTGCTTTGGATTCTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | CAAGTCATGGTCCCAGACGTGGTCGGAGTGCTGCTTTaGGCTAGTTCTCTCTGGACCTCCAGAAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVMVPDVVGVLL*ASSLWTSRRQH Trigger: ATGCTGTCTTCTGGAGGTCCAGAGAGAACTAGCCAAAAGCAGCACTCCGACCACGTCTGGGACCATGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGCTGGGGCTGTCAGGAACTCAACTGTTTAGGACAGAATCCAAAGCACGTCCGTCCACGTCCTTaGTTTCGATCTTCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCCWGCQELNCLGQNPKHVRPRP*FRSSWP Trigger: AGGCCAAGAAGATCGAAATCAAGGACGTGGACGGAC...GTGCTTTGGATTCTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGCTGGGGCTGTCAGGAACTCAACTGTTTAGGACAGAATCCAAAGCACTGGTCCTGGGGTTCTTaGTCAAGAGCCTCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GCCWGCQELNCLGQNPKHWSWGS*SRASGQ Trigger: TTGACCAGAGGCTCTTGATCAAGAACCCCAGGACCA...GTGCTTTGGATTCTGTCCTAAACAGTTGAGTTCCTGACAGCCCCAGCAGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCGCTTCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCGTGTCCACTTGTCTGTaGCTGGGTTGTAGTACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SQRFTGREAQSGTHSKNSVSTCL*LGCSTL Trigger: TAGAGTACTACAACCCAGTCACAGACAAGTGGACAC...GGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGAAGCGCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CAGGACCTCTGCAAGAGCAGTCGGTGCTCTTCACCACTGAGTCATCTCTCTAGCATATCCACTCGTTGGTaGCTGGGTTGTACTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDLCKSSRCSSPLSHLSSISTRW*LGCTAP Trigger: TGGAGCAGTACAACCCAGCCACCAACGAGTGGATAT...GCTAGAGAGATGACTCAGTGGTGAAGAGCACCGACTGCTCTTGCAGAGGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGACAGCATCTGTAGTCATCTAGGGCCCATTGTACGAGTCCAAAAAGTTGTGGCTGGGTTGTACTaGTCCACGGTGCTCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PEDSICSHLGPIVRVQKVVAGLY*STVLRH Trigger: GTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCAC...AACTTTTTGGACTCGTACAATGGGCCCTAGATGACTACAGATGCTGTCTTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTACTTGGGCAGGCTGACTaGAGTCCGGGGCTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLLGQAD*SPGLGP Trigger: AGGACCAAGCCCCGGACTCCAGTCAGCCTGCCCAAG...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGACAGCATCTGTAGTCATCTAGGGCCCATTGTACGAGTCCAAAAAGTTAGAGGGAGCCGGACGTaGTCCATCAGCTTTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PEDSICSHLGPIVRVQKVRGSRT*SISFAM Trigger: CATGGCAAAGCTGATGGAGCACGTCCGGCTCCCTCT...AACTTTTTGGACTCGTACAATGGGCCCTAGATGACTACAGATGCTGTCTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTACATAGCACTCCACGCTaGGGATCGCCTTGGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLHSTPR*GSPWVP Trigger: AGGCACCCAAGGCGATCCGCAGCGTGGAGTGCTATG...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTAGCCAGGACCACACGGTaGGCTTCTACTTCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLARTTR*ASTSTS Trigger: AGACGTGGAAGTAGAAGCTCACCGTGTGGTCCTGGC...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCGAACACCTTCTCTTCTaGGGAGACCGTCAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSILSLSLGFRCAPWQGEHLLF*GDRQLV Trigger: GACAAGCTGACGGTCTCCTCAGAAGAGAAGGTGTTC...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCCAGTGCTCATGTTGGTaGGCAGCAGTGTCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSILSLSLGFRCAPWQGQCSCW*AAVSTC Trigger: ACAAGTGGACACTGCTGCCCACCAACATGAGCACTG...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | ACTCTGAGGCCGCTGTGGGTAGATGCTGAATCCATGTaGCTTTGGTGTCTTCTGTCTGTCTGTCTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPLWVDAESM*LWCLLSVCLCL Trigger: CAAGCAAAGACAGACAGACAGAAGACACCAAAGCAACATGGATTCAGCATCTACCCACAGCGGCCTCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAGACAGCATCTGTAGTCATCTAGGGCCCATTGTACGAGTCCAAAAAGTTTTGGTGGGATGCAGCTaGGACTGCAGGAAATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEDSICSHLGPIVRVQKVLVGCS*DCRKSQ Trigger: CTGTGATTTCCTGCAGTCTCAGCTGCATCCCACCAA...AACTTTTTGGACTCGTACAATGGGCCCTAGATGACTACAGATGCTGTCTTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTGTAAGGGCTGCAGGCTaGCAGGACCACACGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPVRAAG*QDHTVS Trigger: GCTCACCGTGTGGTCCTGGCAGCCTGCAGCCCTTAC...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPVLRRS*MLAMDV Trigger: GACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCAC...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTTCGGGTGCTCATGTCTaGCACGTATATCCACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DPVKEALNTKNLQKQGDTSGAHV*HVYPLV Trigger: AACGAGTGGATATACGTGGCAGACATGAGCACCCGA...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGACAGCATCTGTAGTCATCTAGGGCCCATTGTACGAGTCCAAAAAGTTCTGCTCTGCATCTTCTaGAGGGAAGCTCGGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PEDSICSHLGPIVRVQKVLLCIF*REARLS Trigger: AGATAGCCGAGCTTCCCTCCAGAAGATGCAGAGCAG...AACTTTTTGGACTCGTACAATGGGCCCTAGATGACTACAGATGCTGTCTTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTACCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLPACWQ*TSTGPS Trigger: TGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGG...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | ACACACACACAGCCTACAAAAAGCACTCTGATCTCCTaGCTTCCATTCATCAGAGCCTTGGATGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: THTQPTKSTLIS*LPFIRALDALV Trigger: GACCAGAGCATCCAAGGCTCTGATGAATGGAAGCAAGGAGATCAGAGTGCTTTTTGTAGGCTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTACTTCATGGCTTCGATaGGGAAGTCCTTACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPVKEALNTKNLQKQGDTTSWLR*GSPYRC Trigger: ACACCTGTAAGGACTTCCTCATCGAAGCCATGAAGT...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTAACACCACACCTGCTCTaGATCTTCTGGAGGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLTPHLL*IFWREA Trigger: AGCTTCCCTCCAGAAGATGCAGAGCAGGTGTGGTGT...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | TATGAGGCTGTTCTCCCCTCCCAGGGCAGAGATTCCAATACAAACAATTTGTTATTGATCAAGAGCCTCTaGTCAAGAGGCAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YEAVLPSQGRDSNTNNLLLIKSL*SRGRRW Trigger: CCACCTCCTGCCTCTTGACCAGAGGCTCTTGATCAA...TAACAAATTGTTTGTATTGGAATCTCTGCCCTGGGAGGGGAGAACAGCCTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR TCA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTCAGACATGTCACCTGTaGACATTGCACAGAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPVKEALNTKNLQKQGDTQTCHL*TLHRSK Trigger: CTTACTTCTGTGCAATGTTCACAGGTGACATGTCTG...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATTCCGGCGCTCCTGCATaGTGGCAATGGACGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNSGAPA*WQWTST Trigger: AGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGA...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTTGCCCAGGCAGTTGGTaGGATGCAGCTGAGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPCPGSW*DAAETA Trigger: TGCAGTCTCAGCTGCATCCCACCAACTGCCTGGGCA...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGACAGCATCTGTAGTCATCTAGGGCCCATTGTACGAGTCCAAAAAGTTATCAAGCTGCACACCTaGTCCAGACTTAAGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEDSICSHLGPIVRVQKVIKLHT*SRLKLR Trigger: TCTGAGCTTAAGTCTGGACCAGGTGTGCAGCTTGAT...AACTTTTTGGACTCGTACAATGGGCCCTAGATGACTACAGATGCTGTCTTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATGGCGCTCCTGCATGCTaGCAATGGACGTCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNGAPAC*QWTSTG Trigger: ACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCC...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | AATCTGGAATTCATGACATCAGGTCAAACTATGAAGGCAAAACAGTTCTCATCCTGCTCAGGCACTGCCTaGAAGCACCATCGTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLEFMTSGQTMKAKQFSSCSGTA*KHHRNP Trigger: GGGGTTACGATGGTGCTTCCAGGCAGTGCCTGAGCA...GGATGAGAACTGTTTTGCCTTCATAGTTTGACCTGATGTCATGAATTCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | CATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTaGGCAGGGCTGTATTCGCTAGTGTTCACTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFVTFVRFQMCP*AGLYSLVFTSG Trigger: ACCACTAGTGAACACTAGCGAATACAGCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| 3UTR CAA 72 bp | AGCACTCTGATCTCCTTGCTTCCATTCATCAGAGCCTaGGATGCTCTGGTCCAACTTAATGGGTTTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STLISLLPFIRA*DALVQLNGFTQ Trigger: CTGAGTAAACCCATTAAGTTGGACCAGAGCATCCAAGGCTCTGATGAATGGAAGCAAGGAGATCAGAGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTAGGTCGGTGCACGTGTaGACATCTGCAAAAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPRSVHV*TSAKAR Trigger: CCGAGCTTTTGCAGATGTGCACACGTGCACCGACCT...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CCA 90 bp | ATTCACAGAGAGATTCTCGTTCCATGCCTTGGGTTTTCTTTCAAAGAAGATATTCCACTCGTTGGTGGCTaGGTTGTACTGCTCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHREILVPCLGFSFKEDIPLVGG*VVLLHG Trigger: ACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGG...AATATCTTCTTTGAAAGAAAACCCAAGGCATGGAACGAGAATCTCTCTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR GCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATCTGCAAAAGCTCGGATaGCCAGGCAGTTGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNLQKLG*PGSWWD Trigger: ATCCCACCAACTGCCTGGGCATCCGAGCTTTTGCAG...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTCGCTGGATATCAAGCTaGACACCTGGTCCAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPRWISS*TPGPDL Trigger: TAAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCG...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATGTCGAAGCCTCCGACTaGGTAGAGAAGGTCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNVEASD*VEKVIE Trigger: CTCAATGACCTTCTCTACGCAGTCGGAGGCTTCGAC...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| 3UTR CAA 72 bp | TCTAACCTTGGTTTAACCTTGGGTCTCAATTCCATTTaGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLGLTLGLNSI*SLSLGFRCAPW Trigger: CCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAGACCCAAGGTTAAACCAAGGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CCA 90 bp | ATTCACAGAGAGATTCTCGTTCCATGCCTTGGGTTTTCTTTCAAAGAAGATATTCGTATATCCACTCGTTaGTGGCTGGGTTGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHREILVPCLGFSFKEDIRISTR*WLGCTA Trigger: AGCAGTACAACCCAGCCACCAACGAGTGGATATACG...AATATCTTCTTTGAAAGAAAACCCAAGGCATGGAACGAGAATCTCTCTGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR GCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATGTCACCTGTGAACATTaGACAGAAGTAAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNVTCEH*TEVRAA Trigger: TGCAGCCCTTACTTCTGTGCAATGTTCACAGGTGAC...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATCGAAGAACCACTCATTaGTCTTGTAGCTGTAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNRRTTH*SCSCRL Trigger: AAGCCTACAGCTACAAGACCAATGAGTGGTTCTTCG...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR TCA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATCTCGTAATTGATCCATaGAATCACAGCTTCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNLVIDP*NHSFEH Trigger: GTGTTCGAAGCTGTGATTTCATGGATCAATTACGAG...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | TGCCGCAGCCCCGTGCGTTCCTGCTTCGGCTGCTGCTACAGCCCGGAGTCTCTGACGCTGCGGATCGCCTaGGGTGCCTGGCCACCAACC | + |
|
Preference number: 5 (lower is better) Translates to: CRSPVRSCFGCCYSPESLTLRIA*GAWPPT Trigger: GGTTGGTGGCCAGGCACCCAAGGCGATCCGCAGCGT...CAGAGACTCCGGGCTGTAGCAGCAGCCGAAGCAGGAACGCACGGGGCTGCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS TCA 90 bp | GGCCGGTACTGCCGTCGAAGCCTCCGACTGCGTAGAGAAGGTCATTaGGCACGGCCGCACCCAGGGTGCTCCGGCGCTCCTGCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRYCRRSLRLRREGH*ARPHPGCSGAPACW Trigger: CCAGCATGCAGGAGCGCCGGAGCACCCTGGGTGCGGCCGTGCTCAATGACCTTCTCTACGCAGTCGGAGGCTTCGACGGCAGTACCGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 90 bp | GGCTTCTACGGATGCCAGGCCGGTACTGCCGTCGAAGCCTCCGACTaGGTAGAGAAGGTCATTGAGCACGGCCGCACCCAGGGTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GFYGCQAGTAVEASD*VEKVIEHGRTQGAP Trigger: CGGAGCACCCTGGGTGCGGCCGTGCTCAATGACCTTCTCTACGCAGTCGGAGGCTTCGACGGCAGTACCGGCCTGGCATCCGTAGAAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 90 bp | GCACGGCCGCACCCAGGGTGCTCCGGCGCTCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCACTCCATCGTACACATCCACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPHPGCSGAPACWQ*TSTGPSLHRTHPLS Trigger: GGACAGTGGATGTGTACGATGGAGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACCCTGGGTGCGGCCGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 90 bp | CCCAGGGTGCTCCGGCGCTCCTGCATGCTGGCAATGGACGTCCACTaGTCCTTCACTCCATCGTACACATCCACTGTCCGGACCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRVLRRSCMLAMDVH*SFTPSYTSTVRTRR Trigger: TCTGCGGGTCCGGACAGTGGATGTGTACGATGGAGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACCCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS GCA 90 bp | AGAAGGTCATTGAGCACGGCCGCACCCAGGGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTCCACTGGTCCTTCACTCCATCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSLSTAAPRVLRRS*MLAMDVHWSFTPSY Trigger: GTACGATGGAGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACCCTGGGTGCGGCCGTGCTCAATGACCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS GCA 90 bp | GCTGAGCACCCCAACCCCAGCGCCACTGCGTCGGGTGCTCATGTCTaGCACGTATATCCACTCGTTGGTGGCTGGGTTGTACTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AEHPNPSATASGAHV*HVYPLVGGWVVLLH Trigger: GTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACGCAGTGGCGCTGGGGTTGGGGTGCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | CGTTGGTGGCTGGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCTaGAAGCACCATCGTAACCCCCGACGGCATACAGCTTCCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RWWLGCTAPRCSGTA*KHHRNPRRHTASPP Trigger: TGGAGGGGAAGCTGTATGCCGTCGGGGGTTACGATGGTGCTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 90 bp | CGCCACTGCGTCGGGTGCTCATGTCTGCCACGTATATCCACTCGTTaGTGGCTGGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHCVGCSCLPRISTR*WLGCTAPRCSGTAW Trigger: CCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACGCAGTGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | GCGTCGGGTGCTCATGTCTGCCACGTATATCCACTCGTTGGTGGCTaGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCTGGAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ASGAHVCHVYPLVGG*VVLLHGAQALPGST Trigger: GGTGCTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS GCA 90 bp | CCACGTATATCCACTCGTTGGTGGCTGGGTTGTACTGCTCCACGGTaGTCAGGCACTGCCTGGAAGCACCATCGTAACCCCCGACGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRISTRWWLGCTAPR*SGTAWKHHRNPRRH Trigger: ATGCCGTCGGGGGTTACGATGGTGCTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | CACTGCGTCGGGTGCTCATGTCTGCCACGTATATCCACTCGTTGGTaGCTGGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HCVGCSCLPRISTRW*LGCTAPRCSGTAWK Trigger: CTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS TCA 90 bp | GCAGCTGAGACTGCAGGAAATCACAGCAGTTCTGTCGCACATCCATaGGCTGCAGCAAGCTGGCTGCTGGAAGCAGCACCTGCACGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAETAGNHSSSVAHP*AAASWLLEAAPARS Trigger: AGAACGTGCAGGTGCTGCTTCCAGCAGCCAGCTTGCTGCAGCTCATGGATGTGCGACAGAACTGCTGTGATTTCCTGCAGTCTCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | ACTGGAGTCCGGGGCTTGGTCCTGGGGTTCTTGATCAAGAGCCTCTaGTCAAGAGGCAGGAGGTGGTACTTCATGGCTTCGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGVRGLVLGFLIKSL*SRGRRWYFMASMRK Trigger: CTTCCTCATCGAAGCCATGAAGTACCACCTCCTGCCTCTTGACCAGAGGCTCTTGATCAAGAACCCCAGGACCAAGCCCCGGACTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | CGCTTACTTCGCAGCTCATTCATGACCTTGAAGGCCTTCCCCATGTaGGCAGCGTTGACGGTTACAGTCCTCCGGTTCTTCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLRSSFMTLKAFPM*AALTVTVLRFFSSS Trigger: GGATGAAGAGAAGAACCGGAGGACTGTAACCGTCAACGCTGCCCACATGGGGAAGGCCTTCAAGGTCATGAATGAGCTGCGAAGTAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS-3UTR CAA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTGCACAGACCCCTGCGTaGCGCCGGCACATGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: DPVKEALNTKNLQKQGDTAQTPA*RRHMFM Trigger: CATGAACATGTGCCGGCGCAACGCAGGGGTCTGTGC...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS TCA 90 bp | TCCTCCCAGTGCTCATGTTGGTGGGCAGCAGTGTCCACTTGTCTGTaGCTGGGTTGTAGTACTCTACTGAAGCCAGATTGCACGATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSQCSCWWAAVSTCL*LGCSTLLKPDCTIR Trigger: ACGGATCGTGCAATCTGGCTTCAGTAGAGTACTACAACCCAGTCACAGACAAGTGGACACTGCTGCCCACCAACATGAGCACTGGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | TCTGAGGAGACCGTCAGCTTGTCGCTGGATATCAAGCTGCACACCTaGTCCAGACTTAAGCTCAGAAACTCTTCCCCCAGCATCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEETVSLSLDIKLHT*SRLKLRNSSPSITS Trigger: AGAGGTGATGCTGGGGGAAGAGTTTCTGAGCTTAAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCGACAAGCTGACGGTCTCCTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
||
| CDS CCA 90 bp | GTCCTGGGGTTCTTGATCAAGAGCCTCTGGTCAAGAGGCAGGAGGTaGTACTTCATGGCTTCGATGAGGAAGTCCTTACAGGTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGFLIKSLWSRGRR*YFMASMRKSLQVLL Trigger: CAACAACACCTGTAAGGACTTCCTCATCGAAGCCATGAAGTACCACCTCCTGCCTCTTGACCAGAGGCTCTTGATCAAGAACCCCAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACAAAGTGTTCCCAAATGTGCATGCCCTAGGACCACAATCATGACCTaGGGCAGGCTGACTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: HTHTHTHTQSVPKCACPRTTIMT*GRLTGV Trigger: GACTCCAGTCAGCCTGCCCAAGGTCATGATTGTGGT...CCTAGGGCATGCACATTTGGGAACACTTTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | AGCCAGCGCTTCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCTCCTTACAGGTGTTGTaGTTCTTGATCAAAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SQRFTGREAQSGTHSKNSSLQVL*FLIKAS Trigger: GGAAGCTTTGATCAAGAACAACAACACCTGTAAGGA...GGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGAAGCGCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | CCGCTGTGGGTAGATGCTGAATCCATGTTGCTTTGGTGTCTTCTGTCTGTCTGTACGTATATCCACTCGTaGGTGGCTGGGTTGTACTGC | + |
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Preference number: 5 (lower is better) Translates to: PLWVDAESMLLWCLLSVCTYIHS*VAGLYC Trigger: GCAGTACAACCCAGCCACCAACGAGTGGATATACGT...ACAGACAGACAGAAGACACCAAAGCAACATGGATTCAGCATCTACCCACAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | TCACAGGGAGGGAGGCACAAAGTGGAACCCACAGCAAAAACTCCAGCAGAAACCCCTGCTTCCAAGTGTTaGTCCCAGGATCGTAAACTT | + |
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Preference number: 5 (lower is better) Translates to: SQGGRHKVEPTAKTPAETPASKC*SQDRKL Trigger: AAGTTTACGATCCTGGGACAAACACTTGGAAGCAGG...GGTTTCTGCTGGAGTTTTTGCTGTGGGTTCCACTTTGTGCCTCCCTCCCTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCATTTTGTCACTTTCGTTAGGTTTCAGATGTGCCCCTTGGCAGGGCTCGATCTTCTTGGCCTaGCTCTCAGACATGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: LNSILSLSLGFRCAPWQGSIFLA*LSDMSP Trigger: AGGTGACATGTCTGAGAGCAAGGCCAAGAAGATCGA...GCCCTGCCAAGGGGCACATCTGAAACCTAACGAAAGTGACAAAATGGAATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS TCA 90 bp | CCATCAGCTTTGCCATGTGGTCTAGGCGAGTCTCCTTCTCGTAATTaGTCCATGAAATCACAGCTTCGAACACCTTCTCTTCTGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PSALPCGLGESPSRN*SMKSQLRTPSLLRR Trigger: TCTCCTCAGAAGAGAAGGTGTTCGAAGCTGTGATTTCATGGATCAATTACGAGAAGGAGACTCGCCTAGACCACATGGCAAAGCTGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | CTTTTATTGTATTGTTCATGTGGCAAGTGTTCTTTTCCATGGTGTATGGTCCCTCGTGCTCCATCAGCTTaGCCATGTGGTCTAGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: LLLYCSCGKCSFPWCMVPRAPSA*PCGLGE Trigger: CTCGCCTAGACCACATGGCAAAGCTGATGGAGCACG...AGGGACCATACACCATGGAAAAGAACACTTGCCACATGAACAATACAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | GACCCAGTCAAGGAGGCCCTGAATACTAAAAACCTCCAAAAGCAAGGAGACACTCAGGTGTTGTTGTTCTaGATCAAAGCTTCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: DPVKEALNTKNLQKQGDTQVLLF*IKASSS Trigger: TGAGGAGGAAGCTTTGATCAAGAACAACAACACCTG...AGTGTCTCCTTGCTTTTGGAGGTTTTTAGTATTCAGGGCCTCCTTGACTGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS-3UTR CAA 90 bp | ATTAAAACGCCATGTACAGTGTGGAGAGCTGGAATGGACTGCTATAAAAATAATGAGGAGACCGTCAGCTaGTCGCTGGATATCAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: IKTPCTVWRAGMDCYKNNEETVS*SLDIKL Trigger: CAGCTTGATATCCAGCGACAAGCTGACGGTCTCCTC...ATTATTTTTATAGCAGTCCATTCCAGCTCTCCACACTGTACATGGCGTTTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS TCA 72 bp | TGCCGTCGAAGCCTCCGACTGCGTAGAGAAGGTCATTaGGCACGGCCGCACCCAGGGTGCTCCGGCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CRRSLRLRREGH*ARPHPGCSGAP Trigger: AGGAGCGCCGGAGCACCCTGGGTGCGGCCGTGCTCAATGACCTTCTCTACGCAGTCGGAGGCTTCGACGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | GCACGGCCGCACCCAGGGTGCTCCGGCGCTCCTGCATaGTGGCAATGGACGTCCACTGGTCCTTCACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ARPHPGCSGAPA*WQWTSTGPSLH Trigger: ATGGAGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACCCTGGGTGCGGCCGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | TTGAGCACGGCCGCACCCAGGGTGCTCCGGCGCTCCTaGATGCTGGCAATGGACGTCCACTGGTCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LSTAAPRVLRRS*MLAMDVHWSFT Trigger: AGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACCCTGGGTGCGGCCGTGCTCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | GGATGCCAGGCCGGTACTGCCGTCGAAGCCTCCGACTaGGTAGAGAAGGTCATTGAGCACGGCCGCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: GCQAGTAVEASD*VEKVIEHGRTQ Trigger: CTGGGTGCGGCCGTGCTCAATGACCTTCTCTACGCAGTCGGAGGCTTCGACGGCAGTACCGGCCTGGCATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 90 bp | GCGCCACTGCGTCGGGTGCTCATGTCTGCCACGTATATCCACTCGTaGGTGGCTGGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: APLRRVLMSATYIHS*VAGLYCSTVLRHCL Trigger: CAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACGCAGTGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | CCCAACCCCAGCGCCACTGCGTCGGGTGCTCATGTCTaGCACGTATATCCACTCGTTGGTGGCTGGGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PNPSATASGAHV*HVYPLVGGWVV Trigger: TACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACGCAGTGGCGCTGGGGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | CTCCGGCGCTCCTGCATGCTGGCAATGGACGTCCACTaGTCCTTCACTCCATCGTACACATCCACTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LRRSCMLAMDVH*SFTPSYTSTVR Trigger: CCGGACAGTGGATGTGTACGATGGAGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | CACCCAGGGTGCTCCGGCGCTCCTGCATGCTGGCAATaGACGTCCACTGGTCCTTCACTCCATCGTACACAT | + |
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Preference number: 6 (lower is better) Translates to: HPGCSGAPACWQ*TSTGPSLHRTH Trigger: ATGTGTACGATGGAGTGAAGGACCAGTGGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACCCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | CTGGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCTaGAAGCACCATCGTAACCCCCGACGGCATACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGCTAPRCSGTA*KHHRNPRRHTA Trigger: AGCTGTATGCCGTCGGGGGTTACGATGGTGCTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 90 bp | CGGGTGCTCATGTCTGCCACGTATATCCACTCGTTGGTGGCTGGGTaGTACTGCTCCACGGTGCTCAGGCACTGCCTGGAAGCACCATCG | + |
|
Preference number: 6 (lower is better) Translates to: RVLMSATYIHSLVAG*YCSTVLRHCLEAPS Trigger: CGATGGTGCTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | CCACTCATTGGTCTTGTAGCTGTAGGCTTCTACGGATaGCAGGCCGGTACTGCCGTCGAAGCCTCCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLIGLVAVGFYG*QAGTAVEASDC Trigger: GCAGTCGGAGGCTTCGACGGCAGTACCGGCCTGGCATCCGTAGAAGCCTACAGCTACAAGACCAATGAGTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | GCCACGTATATCCACTCGTTGGTGGCTGGGTTGTACTaGTCCACGGTGCTCAGGCACTGCCTGGAAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ATYIHSLVAGLY*STVLRHCLEAP Trigger: TGGTGCTTCCAGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | GTCGGGTGCTCATGTCTGCCACGTATATCCACTCGTTaGTGGCTGGGTTGTACTGCTCCACGGTGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGCSCLPRISTR*WLGCTAPRCSG Trigger: GCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | CGTCGGGTGCTCATGTCTGCCACGTATATCCACTCGTaGGTGGCTGGGTTGTACTGCTCCACGGTGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRVLMSATYIHS*VAGLYCSTVLR Trigger: CCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCCGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 90 bp | CCAACCACAATCATGACCTTGGGCAGGCTGACTGGAGTCCGGGGCTaGGTCCTGGGGTTCTTGATCAAGAGCCTCTGGTCAAGAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTTIMTLGRLTGVRG*VLGFLIKSLWSRGR Trigger: CCTGCCTCTTGACCAGAGGCTCTTGATCAAGAACCCCAGGACCAAGCCCCGGACTCCAGTCAGCCTGCCCAAGGTCATGATTGTGGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | CGGGGCTTGGTCCTGGGGTTCTTGATCAAGAGCCTCTaGTCAAGAGGCAGGAGGTGGTACTTCATGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RGLVLGFLIKSL*SRGRRWYFMAS Trigger: CGAAGCCATGAAGTACCACCTCCTGCCTCTTGACCAGAGGCTCTTGATCAAGAACCCCAGGACCAAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | GCCACCAACCACAATCATGACCTTGGGCAGGCTGACTaGAGTCCGGGGCTTGGTCCTGGGGTTCTTGATCAA | + |
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Preference number: 6 (lower is better) Translates to: ATNHNHDLGQAD*SPGLGPGVLDQ Trigger: TTGATCAAGAACCCCAGGACCAAGCCCCGGACTCCAGTCAGCCTGCCCAAGGTCATGATTGTGGTTGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | GCTCATGTCTGCCACGTATATCCACTCGTTGGTGGCTaGGTTGTACTGCTCCACGGTGCTCAGGCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AHVCHVYPLVGG*VVLLHGAQALP Trigger: AGGCAGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | GGGTGCTCATGTCTGCCACGTATATCCACTCGTTGGTaGCTGGGTTGTACTGCTCCACGGTGCTCAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: GCSCLPRISTRW*LGCTAPRCSGT Trigger: AGTGCCTGAGCACCGTGGAGCAGTACAACCCAGCCACCAACGAGTGGATATACGTGGCAGACATGAGCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 90 bp | CGCAGCTCATTCATGACCTTGAAGGCCTTCCCCATGTGGGCAGCGTaGACGGTTACAGTCCTCCGGTTCTTCTCTTCATCCTCAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSFMTLKAFPMWAA*TVTVLRFFSSSSAC Trigger: GCAGGCTGAGGATGAAGAGAAGAACCGGAGGACTGTAACCGTCAACGCTGCCCACATGGGGAAGGCCTTCAAGGTCATGAATGAGCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | GTTCTGTCGCACATCCATGAGCTGCAGCAAGCTGGCTaGTGGAAGCAGCACCTGCACGTTCTCTTCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLSHIHELQQAG*WKQHLHVLFCH Trigger: GTGACAGAAGAGAACGTGCAGGTGCTGCTTCCAGCAGCCAGCTTGCTGCAGCTCATGGATGTGCGACAGAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | AGAGCCGTTAAAGCCACCCACGGCATACACGTGGCCTaGCATGAACACCACACCTGCTCTGCATCTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAVKATHGIHVA*HEHHTCSASSG Trigger: TCCAGAAGATGCAGAGCAGGTGTGGTGTTCATGGCAGGCCACGTGTATGCCGTGGGTGGCTTTAACGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | CGCAGCTCATTCATGACCTTGAAGGCCTTCCCCATGTaGGCAGCGTTGACGGTTACAGTCCTCCGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSFMTLKAFPM*AALTVTVLRFF Trigger: GAAGAACCGGAGGACTGTAACCGTCAACGCTGCCCACATGGGGAAGGCCTTCAAGGTCATGAATGAGCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | CACAGCAGCCGCTTACTTCGCAGCTCATTCATGACCTaGAAGGCCTTCCCCATGTGGGCAGCGTTGACGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HSSRLLRSSFMT*KAFPMWAALTV Trigger: AACCGTCAACGCTGCCCACATGGGGAAGGCCTTCAAGGTCATGAATGAGCTGCGAAGTAAGCGGCTGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 90 bp | ATCACGTCACACAGCAGCCGCTTACTTCGCAGCTCATTCATGACCTaGAAGGCCTTCCCCATGTGGGCAGCGTTGACGGTTACAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ITSHSSRLLRSSFMT*KAFPMWAALTVTVL Trigger: GAGGACTGTAACCGTCAACGCTGCCCACATGGGGAAGGCCTTCAAGGTCATGAATGAGCTGCGAAGTAAGCGGCTGCTGTGTGACGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS TCA 72 bp | ACTGCAGGAAATCACAGCAGTTCTGTCGCACATCCATaGGCTGCAGCAAGCTGGCTGCTGGAAGCAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TAGNHSSSVAHP*AAASWLLEAAP Trigger: AGGTGCTGCTTCCAGCAGCCAGCTTGCTGCAGCTCATGGATGTGCGACAGAACTGCTGTGATTTCCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | ACCTGTGAACATTGCACAGAAGTAAGGGCTGCAGGCTaGCAGGACCACACGGTGAGCTTCTACTTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: TCEHCTEVRAAG*QDHTVSFYFHV Trigger: GACGTGGAAGTAGAAGCTCACCGTGTGGTCCTGGCAGCCTGCAGCCCTTACTTCTGTGCAATGTTCACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | TCGGTAACAGAGGGAGCCGGACGTGCTCCATCAGCTTaGCCATGTGGTCTAGGCGAGTCTCCTTCTCGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SVTEGAGRAPSA*PCGLGESPSRN Trigger: ATTACGAGAAGGAGACTCGCCTAGACCACATGGCAAAGCTGATGGAGCACGTCCGGCTCCCTCTGTTACCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | TTCATGACCTTGAAGGCCTTCCCCATGTGGGCAGCGTaGACGGTTACAGTCCTCCGGTTCTTCTCTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: FMTLKAFPMWAA*TVTVLRFFSSS Trigger: GGATGAAGAGAAGAACCGGAGGACTGTAACCGTCAACGCTGCCCACATGGGGAAGGCCTTCAAGGTCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS TCA 72 bp | TGCTCATGTTGGTGGGCAGCAGTGTCCACTTGTCTGTaGCTGGGTTGTAGTACTCTACTGAAGCCAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSCWWAAVSTCL*LGCSTLLKPDC Trigger: GCAATCTGGCTTCAGTAGAGTACTACAACCCAGTCACAGACAAGTGGACACTGCTGCCCACCAACATGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS GCA 72 bp | CTGAGGAGACCGTCAGCTTGTCGCTGGATATCAAGCTaGACACCTGGTCCAGACTTAAGCTCAGAAACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRRPSACRWISS*TPGPDLSSETL Trigger: AAGAGTTTCTGAGCTTAAGTCTGGACCAGGTGTGCAGCTTGATATCCAGCGACAAGCTGACGGTCTCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | TCGATGAGCTTGCTGAGAGTCTGTCCGTCCACGTCCTaGATTTCGATCTTCTTGGCCTTGCTCTCAGACATG | + |
|
Preference number: 6 (lower is better) Translates to: SMSLLRVCPSTS*ISIFLALLSDM Trigger: CATGTCTGAGAGCAAGGCCAAGAAGATCGAAATCAAGGACGTGGACGGACAGACTCTCAGCAAGCTCATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CCA 72 bp | TTCTTGATCAAGAGCCTCTGGTCAAGAGGCAGGAGGTaGTACTTCATGGCTTCGATGAGGAAGTCCTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: FLIKSLWSRGRR*YFMASMRKSLQ Trigger: CTGTAAGGACTTCCTCATCGAAGCCATGAAGTACCACCTCCTGCCTCTTGACCAGAGGCTCTTGATCAAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | GCTTCGATGAGGAAGTCCTTACAGGTGTTGTTGTTCTaGATCAAAGCTTCCTCCTCAACTGTCTGGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASMRKSLQVLLF*IKASSSTVWTR Trigger: CCTGGTCCAGACAGTTGAGGAGGAAGCTTTGATCAAGAACAACAACACCTGTAAGGACTTCCTCATCGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS TCA 72 bp | TTGCCATGTGGTCTAGGCGAGTCTCCTTCTCGTAATTaGTCCATGAAATCACAGCTTCGAACACCTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPCGLGESPSRN*SMKSQLRTPSL Trigger: AAGAGAAGGTGTTCGAAGCTGTGATTTCATGGATCAATTACGAGAAGGAGACTCGCCTAGACCACATGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | TTCATGGCTTCGATGAGGAAGTCCTTACAGGTGTTGTaGTTCTTGATCAAAGCTTCCTCCTCAACTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FMASMRKSLQVL*FLIKASSSTVW Trigger: CCAGACAGTTGAGGAGGAAGCTTTGATCAAGAACAACAACACCTGTAAGGACTTCCTCATCGAAGCCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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| CDS CAA 72 bp | TACTTCATGGCTTCGATGAGGAAGTCCTTACAGGTGTaGTTGTTCTTGATCAAAGCTTCCTCCTCAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YFMASMRKSLQV*LFLIKASSSTV Trigger: GACAGTTGAGGAGGAAGCTTTGATCAAGAACAACAACACCTGTAAGGACTTCCTCATCGAAGCCATGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160860.9 |
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