Pregenerated sensors for KLHL28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020948Ensembl transcript IDs: ENSMUST00000021331.9, ENSMUST00000222508.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCAGGGAGGCTGGAAGGGCATCAGAACCCTGGAGTTGGAGCTGTaGGGCAGTTATACTCCTCTGGGTGCTGGACACCAAATGAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: SQGGWKGIRTLELEL*GSYTPLGAGHQMRV Trigger: GACCCTCATTTGGTGTCCAGCACCCAGAGGAGTATAACTGCCCCACAGCTCCAACTCCAGGGTTCTGATGCCCTTCCAGCCTCCCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CCA 90 bp | TGGGGAGTTCCCAGGGAGGCTGGAAGGGCATCAGAACCCTGGAGTTaGAGCTGTGGGGCAGTTATACTCCTCTGGGTGCTGGACACCAAA | + |
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Preference number: 1 (lower is better) Translates to: WGVPREAGRASEPWS*SCGAVILLWVLDTK Trigger: TTTGGTGTCCAGCACCCAGAGGAGTATAACTGCCCCACAGCTCCAACTCCAGGGTTCTGATGCCCTTCCAGCCTCCCTGGGAACTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CCA 90 bp | TATGTGTGGGGAGTTCCCAGGGAGGCTGGAAGGGCATCAGAACCCTaGAGTTGGAGCTGTGGGGCAGTTATACTCCTCTGGGTGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: YVWGVPREAGRASEP*SWSCGAVILLWVLD Trigger: GTCCAGCACCCAGAGGAGTATAACTGCCCCACAGCTCCAACTCCAGGGTTCTGATGCCCTTCCAGCCTCCCTGGGAACTCCCCACACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CCA 90 bp | CCTCACCGACAACCAAGCACACTATTTGCAACAGAGGACACTCACTaGTACTCTACATTGACAATGCTTCTGAGGCCTGTTAAAATCACA | + |
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Preference number: 1 (lower is better) Translates to: PHRQPSTLFATEDTH*YSTLTMLLRPVKIT Trigger: TGTGATTTTAACAGGCCTCAGAAGCATTGTCAATGTAGAGTACCAGTGAGTGTCCTCTGTTGCAAATAGTGTGCTTGGTTGTCGGTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR TCA 90 bp | ACAATGCTTCTGAGGCCTGTTAAAATCACAGCCATCTCTGGTTCATaGCACGGCACAATTCATAAGGCAAAGATACAAGCATTATCATCC | + |
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Preference number: 1 (lower is better) Translates to: TMLLRPVKITAISGS*HGTIHKAKIQALSS Trigger: GGATGATAATGCTTGTATCTTTGCCTTATGAATTGTGCCGTGTCATGAACCAGAGATGGCTGTGATTTTAACAGGCCTCAGAAGCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CAA 90 bp | GTGGGGAGTTCCCAGGGAGGCTGGAAGGGCATCAGAACCCTGGAGTaGGAGCTGTGGGGCAGTTATACTCCTCTGGGTGCTGGACACCAA | + |
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Preference number: 2 (lower is better) Translates to: VGSSQGGWKGIRTLE*ELWGSYTPLGAGHQ Trigger: TTGGTGTCCAGCACCCAGAGGAGTATAACTGCCCCACAGCTCCAACTCCAGGGTTCTGATGCCCTTCCAGCCTCCCTGGGAACTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTGCCATGATGTTCTAGAACACAGGTTCTGGGTGTGTTCTTTCCTAGTTTTGTTGTGTGTCTATGTGTaGGGAGTTCCCAGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RCHDVLEHRFWVCSFLVLLCVYV*GVPREA Trigger: AGCCTCCCTGGGAACTCCCCACACATAGACACACAA...CAAAACTAGGAAAGAACACACCCAGAACCTGTGTTCTAGAACATCATGGCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CAA 90 bp | CCAAGCACACTATTTGCAACAGAGGACACTCACTGGTACTCTACATaGACAATGCTTCTGAGGCCTGTTAAAATCACAGCCATCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PSTLFATEDTHWYST*TMLLRPVKITAISG Trigger: ACCAGAGATGGCTGTGATTTTAACAGGCCTCAGAAGCATTGTCAATGTAGAGTACCAGTGAGTGTCCTCTGTTGCAAATAGTGTGCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CAA 90 bp | CATAATAACTACTGGAGGAAATGCACTCTGTTACACTTTACTCTTTaGAGAGGGTTGTATCCTATCTACATTTCAGTAGATGCCGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HNNYWRKCTLLHFTL*RGLYPIYISVDAAS Trigger: TGAGGCGGCATCTACTGAAATGTAGATAGGATACAACCCTCTCAAAAGAGTAAAGTGTAACAGAGTGCATTTCCTCCAGTAGTTATTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACACTTTACTCTTTTGAGAGGGTTGTATCCTATCTACATTTCAGTAGATGCTTGTTCACAGGAACATaGTTCTTCTGTTGCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VTLYSFERVVSYLHFSRCLFTGT*FFCCPK Trigger: TTTTGGGCAACAGAAGAATCATGTTCCTGTGAACAA...GCATCTACTGAAATGTAGATAGGATACAACCCTCTCAAAAGAGTAAAGTGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CCA 72 bp | GGCTGGAAGGGCATCAGAACCCTGGAGTTGGAGCTGTaGGGCAGTTATACTCCTCTGGGTGCTGGACACCAA | + |
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Preference number: 3 (lower is better) Translates to: GWKGIRTLELEL*GSYTPLGAGHQ Trigger: TTGGTGTCCAGCACCCAGAGGAGTATAACTGCCCCACAGCTCCAACTCCAGGGTTCTGATGCCCTTCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CCA 72 bp | TTTGTGTGTCTATGTGTGGGGAGTTCCCAGGGAGGCTaGAAGGGCATCAGAACCCTGGAGTTGGAGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FVCLCVGSSQGG*KGIRTLELELW Trigger: CCACAGCTCCAACTCCAGGGTTCTGATGCCCTTCCAGCCTCCCTGGGAACTCCCCACACATAGACACACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR CCA 72 bp | CAACCAAGCACACTATTTGCAACAGAGGACACTCACTaGTACTCTACATTGACAATGCTTCTGAGGCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: QPSTLFATEDTH*YSTLTMLLRPV Trigger: AACAGGCCTCAGAAGCATTGTCAATGTAGAGTACCAGTGAGTGTCCTCTGTTGCAAATAGTGTGCTTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR TCA 72 bp | CTGAGGCCTGTTAAAATCACAGCCATCTCTGGTTCATaGCACGGCACAATTCATAAGGCAAAGATACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LRPVKITAISGS*HGTIHKAKIQA Trigger: TGCTTGTATCTTTGCCTTATGAATTGTGCCGTGTCATGAACCAGAGATGGCTGTGATTTTAACAGGCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR GCA 72 bp | TTTGAGAGGGTTGTATCCTATCTACATTTCAGTAGATaGCGCCTCAGCATCTCACATGGTGTCTTACATGTA | + |
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Preference number: 3 (lower is better) Translates to: FERVVSYLHFSR*RLSISHGVLHV Trigger: TACATGTAAGACACCATGTGAGATGCTGAGGCGGCATCTACTGAAATGTAGATAGGATACAACCCTCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGGGTTGTATCCTATCTACATTTCAGTAGATGCCGCCTCAGCATCTCACATGACGAAAACCACTGTTTaGCAACCTTACCATACTATT | + |
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Preference number: 3 (lower is better) Translates to: RGLYPIYISVDAASASHMTKTTV*QPYHTI Trigger: AATAGTATGGTAAGGTTGCAAAACAGTGGTTTTCGT...CATGTGAGATGCTGAGGCGGCATCTACTGAAATGTAGATAGGATACAACCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| 3UTR TCA 72 bp | AACAAGAAAAACTACAAATTGCCCGGCTATAGTTTTTaGGTCATAACATGTATGCTAACAGGTAAAGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: NKKNYKLPGYSF*VITCMLTGKAR Trigger: CCTAGCTTTACCTGTTAGCATACATGTTATGACTCAAAAACTATAGCCGGGCAATTTGTAGTTTTTCTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTCCTCTTATCAGCCATaGGCGCAACCATCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HWALFPVVPPCAISTSSHSSYQP*AQPSPR Trigger: CCTGGGAGATGGTTGCGCCCATGGCTGATAAGAGGA...GTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | AGGTTCAGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACCCTGGGCTCTTTCATTaGTCTACACACAGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RFRTLGTLSCSTSLCDFHPGLFH*STHSPL Trigger: CAGTGGACTGTGTGTAGACCAATGAAAGAGCCCAGG...GTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCTGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTTACTCCACAATGGCCTaGAGCGCAGCTTCATCGATG | + |
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Preference number: 4 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLYSTMA*SAASSM Trigger: CATCGATGAAGCTGCGCTGCAGGCCATTGTGGAGTA...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | AGGTTCAGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAGCGACAGTATATCATaGCTGCTGAATCCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: RFRTLGTLSCSTSLCDFHSDSIS*LLNPAM Trigger: CATGGCTGGATTCAGCAGGCATGATATACTGTCGCT...GTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCTGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | AGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCGCTTCATCGATGCACTaGAACTCAACCTCACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RTLGTLSCSTSLCDFHKFASSMH*NSTSLF Trigger: GAACAGTGAGGTTGAGTTTCAGTGCATCGATGAAGC...GAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | AGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCCTGTGTCCTGAGAAATaGAAACTGTGCCCGTATAGG | + |
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Preference number: 4 (lower is better) Translates to: RTLGTLSCSTSLCDFHKFLCPEK*KLCPYR Trigger: CCTATACGGGCACAGTTTTCATTTCTCAGGACACAG...GAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTCACCAACTCCTGTCCTaGGCTCTTTCATTGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLHQLLS*ALSLVY Trigger: GTAGACCAATGAAAGAGCCCAGGACAGGAGTTGGTG...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | AGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCTCCATCCAGGACAGCTaGAGCAAAACAACTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RTLGTLSCSTSLCDFHKFSIQDS*SKTTSC Trigger: ACAAGAAGTTGTTTTGCTGCAGCTGTCCTGGATGGA...GAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CGCTGCCATGATGTTCTAGAACACAGGTTCTGGGTGTGTTCTTTCCTAGTTTTGCCTGGGCTCTTTCATTaGTCTACACACAGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RCHDVLEHRFWVCSFLVLPGLFH*STHSPL Trigger: CAGTGGACTGTGTGTAGACCAATGAAAGAGCCCAGG...CAAAACTAGGAAAGAACACACCCAGAACCTGTGTTCTAGAACATCATGGCAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTGTCTATGTTCAGGCATaGAGTGGTACTTTAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLVYVQA*SGTLGL Trigger: AAGCCCTAAAGTACCACTTCATGCCTGAACATAGAC...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTTGGGCTAAGTACTTCTaGCGTTCTTGTACATCGTAC | + |
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Preference number: 4 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLWAKYF*RSCTSY Trigger: GTACGATGTACAAGAACGGCAGAAGTACTTAGCCCA...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGTTGTATCCTATCTACATTTCAGTAGATGCCGCCTCAGCATCTCACATGCACCTACTCGAAGAATaGTGTCACAGAGTTCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RGLYPIYISVDAASASHMHLLEE*CHRVRD Trigger: ATCACGAACTCTGTGACATCATTCTTCGAGTAGGTG...CATGTGAGATGCTGAGGCGGCATCTACTGAAATGTAGATAGGATACAACCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAGGCGTACTCCACAATaGCCTGCAGCGCAGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QFKVPNKTESSCHFTLQRRRTPQ*PAAQLH Trigger: ATGAAGCTGCGCTGCAGGCCATTGTGGAGTACGCCT...TCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTCTGCACACAGTACTTTaGGAGCACAGCGAGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: QAISQFKVPNKTESSCHFLHTVL*EHSEVV Trigger: CACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAG...AAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | ATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATCTGCACACAGTACTTTaGGAGCACAGCGAGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: IKSKLLVSSKYPTKLSLHLHTVL*EHSEVV Trigger: CACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAG...ATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTTCTTGTGGTTGTCATTaGGGCCACAGGTTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: QEQAISQFKVPNKTESSCSCGCH*GHRLPL Trigger: CAGTGGCAACCTGTGGCCCCAATGACAACCACAAGA...ACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | GCATCATCTCTAAGTCACCATTCAAAAGCCATGGGAAGTATAACTCAAGCCATTGGCCATAGCCTCCAATaGCGTATAGCATTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: ASSLSHHSKAMGSITQAIGHSLQ*RIAFHP Trigger: TGGATGGAATGCTATACGCCATTGGAGGCTATGGCC...AATGGCTTGAGTTATACTTCCCATGGCTTTTGAATGGTGACTTAGAGATGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | GTTACACTTTACTCTTTTGAGAGGGTTGTATCCTATCTACATTTCAGTAGATGCTCCTCTTATCAGCCATaGGCGCAACCATCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VTLYSFERVVSYLHFSRCSSYQP*AQPSPR Trigger: CCTGGGAGATGGTTGCGCCCATGGCTGATAAGAGGA...GCATCTACTGAAATGTAGATAGGATACAACCCTCTCAAAAGAGTAAAGTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGTTGTATCCTATCTACATTTCAGTAGATGCCGCCTCAGCATCTCACATGCTTGTACATCGTACTTaGTCCAAGATTCTAATGCAT | + |
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Preference number: 4 (lower is better) Translates to: RGLYPIYISVDAASASHMLVHRT*SKILMH Trigger: ATGCATTAGAATCTTGGATCAAGTACGATGTACAAG...CATGTGAGATGCTGAGGCGGCATCTACTGAAATGTAGATAGGATACAACCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | GCATCATCTCTAAGTCACCATTCAAAAGCCATGGGAAGTATAACTCAAGCCATTGTCTATGTTCAGGCATaGAGTGGTACTTTAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASSLSHHSKAMGSITQAIVYVQA*SGTLGL Trigger: AAGCCCTAAAGTACCACTTCATGCCTGAACATAGAC...AATGGCTTGAGTTATACTTCCCATGGCTTTTGAATGGTGACTTAGAGATGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | TCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCCAGATAGGAAGACCCTaGGTGACCACCGACTACATA | + |
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Preference number: 4 (lower is better) Translates to: SKYPTKLSLHVTLRYKESQIGRP*VTTDYI Trigger: TATGTAGTCGGTGGTCACTCAGGGTCTTCCTATCTG...GCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | AAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCAGTGCGCAGCTTCATCGATaGACTGAAACTCAACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KYPTKLSLHVTLRYKESSAQLHR*TETQPH Trigger: GTGAGGTTGAGTTTCAGTGCATCGATGAAGCTGCGC...ACTGCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | GCATCATCTCTAAGTCACCATTCAAAAGCCATGGGAAGTATAACTCAAGCCATTTGGGCTAAGTACTTCTaGCGTTCTTGTACATCGTAC | + |
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Preference number: 4 (lower is better) Translates to: ASSLSHHSKAMGSITQAIWAKYF*RSCTSY Trigger: GTACGATGTACAAGAACGGCAGAAGTACTTAGCCCA...AATGGCTTGAGTTATACTTCCCATGGCTTTTGAATGGTGACTTAGAGATGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTGGCCATAGCCTCCAATaGCGTATAGCATTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QAISQFKVPNKTESSCHFGHSLQ*RIAFHP Trigger: TGGATGGAATGCTATACGCCATTGGAGGCTATGGCC...AAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAACACCAACTCCTGTCCTaGGCTCTTTCATTGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKHQLLS*ALSLVY Trigger: GTAGACCAATGAAAGAGCCCAGGACAGGAGTTGGTG...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | AAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCAGTATGTCACAGAGTTCGTaGTGCTGGCGAAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: KYPTKLSLHVTLRYKESSMSQSS*CWRRRF Trigger: GAATCTTCTTCGCCAGCATCACGAACTCTGTGACAT...ACTGCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | ATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATATGTCACAGAGTTCGTaGTGCTGGCGAAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: IKSKLLVSSKYPTKLSLHMSQSS*CWRRRF Trigger: GAATCTTCTTCGCCAGCATCACGAACTCTGTGACAT...ATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACCTACTCGAAGAATaGTGTCACAGAGTTCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QEQAISQFKVPNKTESSCHLLEE*CHRVRD Trigger: ATCACGAACTCTGTGACATCATTCTTCGAGTAGGTG...ACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGACTGTGTCCTGAGAAATaGAAACTGTGCCCGTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFKVPNKTESSCHFTLQRLCPEK*KLCPYR Trigger: CCTATACGGGCACAGTTTTCATTTCTCAGGACACAG...TCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR TCA 90 bp | GTGATGATTGACTTGTTATTTACAATCCTTAAAAGTACCCGAAGTAAAAGCAGCCAGATAGGAAGACCCTaGGTGACCACCGACTACATA | + |
|
Preference number: 4 (lower is better) Translates to: VMIDLLFTILKSTRSKSSQIGRP*VTTDYI Trigger: TATGTAGTCGGTGGTCACTCAGGGTCTTCCTATCTG...GCTGCTTTTACTTCGGGTACTTTTAAGGATTGTAAATAACAAGTCAATCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | GTGATGATTGACTTGTTATTTACAATCCTTAAAAGTACCCGAAGTAAAAGCAGCGCGCAGCTTCATCGATaGACTGAAACTCAACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VMIDLLFTILKSTRSKSSAQLHR*TETQPH Trigger: GTGAGGTTGAGTTTCAGTGCATCGATGAAGCTGCGC...GCTGCTTTTACTTCGGGTACTTTTAAGGATTGTAAATAACAAGTCAATCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGCCACAGGTTGCCACTaGCTTATTTTGGGGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKATGCH*LILGMY Trigger: ATACATCCCCAAAATAAGGCAGTGGCAACCTGTGGC...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCAGCGACAGTATATCATaGCTGCTGAATCCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SKYPTKLSLHVTLRYKESSDSIS*LLNPAM Trigger: CATGGCTGGATTCAGCAGGCATGATATACTGTCGCT...GCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGACATAGCTTTGAAGTATaGGCTGATGCTGGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFKVPNKTESSCHFTLQRHSFEV*ADAGKD Trigger: GTCCTTGCCAGCATCAGCCCATACTTCAAAGCTATG...TCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | ATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTGCCACAGGTTGCCACTaGCTTATTTTGGGGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IIKSKLLVSSKYPTKLSLATGCH*LILGMY Trigger: ATACATCCCCAAAATAAGGCAGTGGCAACCTGTGGC...AAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | TTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACTCCATCCAGGACAGCTaGAGCAAAACAACTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSSKYPTKLSLHVTLRYSIQDS*SKTTSC Trigger: ACAAGAAGTTGTTTTGCTGCAGCTGTCCTGGATGGA...GTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGTAGTTATCGATTACTaGAGCACCAACTCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKVVIDY*STNSCP Trigger: AGGACAGGAGTTGGTGCTGCAGTAATCGATAACTAC...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCGTAGTTATCGATTACTaGAGCACCAACTCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKYPTKLSLHVTLRYKESVVIDY*STNSCP Trigger: AGGACAGGAGTTGGTGCTGCAGTAATCGATAACTAC...GCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CCA 90 bp | TGCATATATTTCTGTGCTGAAGGACATGTAATCTCTAAAACAAGAAGGGGAAAACATAGCTTTGAAGTATaGGCTGATGCTGGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CIYFCAEGHVISKTRRGKHSFEV*ADAGKD Trigger: GTCCTTGCCAGCATCAGCCCATACTTCAAAGCTATG...TTTTCCCCTTCTTGTTTTAGAGATTACATGTCCTTCAGCACAGAAATATATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTAGAACGAGTTTTATCTaGAGTAAGTTTGCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QEQAISQFKVPNKTESSCRTSFI*SKFAAG Trigger: GCCAGCAGCAAACTTACTCCAGATAAAACTCGTTCT...ACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACGCCACTGCCTTATTTTaGGGATGTATTTTTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: EQAISQFKVPNKTESSCHATALF*GCIFLQ Trigger: CTGTAGAAAAATACATCCCCAAAATAAGGCAGTGGC...GTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACCAAAACAACTTCTTGTaGTTGTCATTGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSSKYPTKLSLHVTLRYQNNFL*LSLGPQ Trigger: CTGTGGCCCCAATGACAACCACAAGAAGTTGTTTTG...GTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | CACTATATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGATTTTCCTCCTACTaGACACAGTACTTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYIIKSKLLVSSKYPTKLRFSSY*TQYFGS Trigger: GCTCCCAAAGTACTGTGTGCAGTAGGAGGAAAATCT...CAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTATATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | GTGATGATTGACTTGTTATTTACAATCCTTAAAAGTACCCGAAGTAAAAGCAGCAGATTTTCCTCCTACTaGACACAGTACTTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VMIDLLFTILKSTRSKSSRFSSY*TQYFGS Trigger: GCTCCCAAAGTACTGTGTGCAGTAGGAGGAAAATCT...GCTGCTTTTACTTCGGGTACTTTTAAGGATTGTAAATAACAAGTCAATCATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACCAGTTAATCCAAAATTaGAGCGACAGTATATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EQAISQFKVPNKTESSCHQLIQN*SDSISC Trigger: GCATGATATACTGTCGCTGCAATTTTGGATTAACTG...GTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | AAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCAGTTTACCAGGGTCAAGTTaGCTTTCAAGAAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KYPTKLSLHVTLRYKESSLPGSS*LSRNAQ Trigger: CTGTGCATTTCTTGAAAGCCAACTTGACCCTGGTAA...ACTGCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | GTTACACTTTACTCTTTTGAGAGGGTTGTATCCTATCTACATTTCAGTAGATGCTTACCAGGGTCAAGTTaGCTTTCAAGAAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTLYSFERVVSYLHFSRCLPGSS*LSRNAQ Trigger: CTGTGCATTTCTTGAAAGCCAACTTGACCCTGGTAA...GCATCTACTGAAATGTAGATAGGATACAACCCTCTCAAAAGAGTAAAGTGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
||
| CDS-3UTR CCA 90 bp | CACTATATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGCAAAACAACTTCTTGTaGTTGTCATTGGGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HYIIKSKLLVSSKYPTKLQNNFL*LSLGPQ Trigger: CTGTGGCCCCAATGACAACCACAAGAAGTTGTTTTG...CAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTATATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | TGCATATATTTCTGTGCTGAAGGACATGTAATCTCTAAAACAAGAAGGGGAAAAAGAACGAGTTTTATCTaGAGTAAGTTTGCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CIYFCAEGHVISKTRRGKRTSFI*SKFAAG Trigger: GCCAGCAGCAAACTTACTCCAGATAAAACTCGTTCT...TTTTCCCCTTCTTGTTTTAGAGATTACATGTCCTTCAGCACAGAAATATATGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | AAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCAGTGCCACTGCCTTATTTTaGGGATGTATTTTTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KYPTKLSLHVTLRYKESSATALF*GCIFLQ Trigger: CTGTAGAAAAATACATCCCCAAAATAAGGCAGTGGC...ACTGCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| 3UTR CAA 72 bp | TACTGGAGGAAATGCACTCTGTTACACTTTACTCTTTaGAGAGGGTTGTATCCTATCTACATTTCAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YWRKCTLLHFTL*RGLYPIYISVD Trigger: ATCTACTGAAATGTAGATAGGATACAACCCTCTCAAAAGAGTAAAGTGTAACAGAGTGCATTTCCTCCAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGACTTGTACATCGTACTTaGTCCAAGATTCTAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QFKVPNKTESSCHFTLQRLVHRT*SKILMH Trigger: ATGCATTAGAATCTTGGATCAAGTACGATGTACAAG...TCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | GTTTGGTGCATATATTTCTGTGCTGAAGGACATGTAATCTCTAAAACAAGAAGGAGAAGATTCAATCCCTaGAGAAGTTGTTCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VWCIYFCAEGHVISKTRRRRFNP*RSCSEC Trigger: ACATTCTGAACAACTTCTGCAGGGATTGAATCTTCT...CCTTCTTGTTTTAGAGATTACATGTCCTTCAGCACAGAAATATATGCACCAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAACAGTTAATCCAAAATTaGAGCGACAGTATATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKQLIQN*SDSISC Trigger: GCATGATATACTGTCGCTGCAATTTTGGATTAACTG...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTTGTTCAGAATGTAAGTaGGTTAAGTTAGCAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QAISQFKVPNKTESSCHFCSECK*VKLASM Trigger: CATGCTTGCTAACTTAACCCACTTACATTCTGAACA...AAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAATGTTCAGAATGTAAGTaGGTTAAGTTAGCAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKCSECK*VKLASM Trigger: CATGCTTGCTAACTTAACCCACTTACATTCTGAACA...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR GCA 90 bp | CACTATATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGAAGATTCAATCCCTaGAGAAGTTGTTCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HYIIKSKLLVSSKYPTKLRRFNP*RSCSEC Trigger: ACATTCTGAACAACTTCTGCAGGGATTGAATCTTCT...CAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTATATAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CCA 90 bp | CACTATATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGCATTCAAGCAGTCATTaGAGACAATTTCGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HYIIKSKLLVSSKYPTKLHSSSH*RQFRPN Trigger: ATTTGGACGAAATTGTCTCCAATGACTGCTTGAATG...CAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTATATAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CCA 90 bp | CGTAACGCTCCACACTGTTCATGTGAGCGGGGCCATAGCCTCCAATaGCGTATAGCATTCCATCCAGGACAGCTGCAGCAAAACAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNAPHCSCERGHSLQ*RIAFHPGQLQQNNF Trigger: GAAGTTGTTTTGCTGCAGCTGTCCTGGATGGAATGCTATACGCCATTGGAGGCTATGGCCCCGCTCACATGAACAGTGTGGAGCGTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS TCA 90 bp | CCACCTACCACGAAAATAAAACCTAGCATGACTCCGACGCCAAAGTaGATCCTCTTATCAGCCATGGGCGCAACCATCTCCCAGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPTTKIKPSMTPTPK*ILLSAMGATISQES Trigger: GGACTCCTGGGAGATGGTTGCGCCCATGGCTGATAAGAGGATTCACTTTGGCGTCGGAGTCATGCTAGGTTTTATTTTCGTGGTAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CAA 90 bp | CACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACACTGCACACAGTACTTaGGGAGCACAGCGAGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HWALFPVVPPCAISTSSHTAHST*GAQRGR Trigger: ACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAGT...GTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS GCA 90 bp | CCGTATAGGCGTACTCCACAATGGCCTGCAGCGCAGCTTCATCGATaGACTGAAACTCAACCTCACTGTTCTCTTTCTCAGAAAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PYRRTPQWPAAQLHR*TETQPHCSLSQKGC Trigger: GCAACCTTTCTGAGAAAGAGAACAGTGAGGTTGAGTTTCAGTGCATCGATGAAGCTGCGCTGCAGGCCATTGTGGAGTACGCCTATACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS GCA 90 bp | CTCCACACTATCCAAACAGGCAAAGAGTCCAGATTTTCCTCCTACTaGACACAGTACTTTGGGAGCACAGCGAGGTCGTGTCATCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHTIQTGKESRFSSY*TQYFGSTARSCHQD Trigger: GTCTTGATGACACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAGTAGGAGGAAAATCTGGACTCTTTGCCTGTTTGGATAGTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CCA 90 bp | AACAGGCAAAGAGTCCAGATTTTCCTCCTACTGCACACAGTACTTTaGGAGCACAGCGAGGTCGTGTCATCAAGACTGTCTGATGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRQRVQIFLLLHTVL*EHSEVVSSRLSDER Trigger: TCTCTCATCAGACAGTCTTGATGACACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAGTAGGAGGAAAATCTGGACTCTTTGCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACGTACTTCTGCCGTTCTaGTACATCGTACTTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RFRTLGTLSCSTSLCDFHVLLPF*YIVLDP Trigger: TGGATCAAGTACGATGTACAAGAACGGCAGAAGTAC...GTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCTGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTTCCTGGGCTCTTTCATaGGTCTACACACAGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLSWALS*VYTQST Trigger: AGTGGACTGTGTGTAGACCAATGAAAGAGCCCAGGA...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS CCA 90 bp | AGGAACTTAACGCTCAGCAATGGTAACCGTACACTGTTCAGCAGCTaGGCTAAGTACTTCTGCCGTTCTTGTACATCGTACTTGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RNLTLSNGNRTLFSS*AKYFCRSCTSYLIQ Trigger: TTGGATCAAGTACGATGTACAAGAACGGCAGAAGTACTTAGCCCAGCTGCTGAACAGTGTACGGTTACCATTGCTGAGCGTTAAGTTCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAGGACACTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACTGCCACTGCCTTATTTaGGGGATGTATTTTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: RFRTLGTLSCSTSLCDFHCHCLI*GMYFST Trigger: TGTAGAAAAATACATCCCCAAAATAAGGCAGTGGCA...GTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAGTGTCCTGAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTGAGAAGTCCAGGTGTTaGTATCAGGATTCCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLEKSRC*YQDSNI Trigger: AATGTTGGAATCCTGATACAAACACCTGGACTTCTC...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS TCA 90 bp | GTCGTGTCATCAAGACTGTCTGATGAGAGAGTCTATGTTCAGGCATaGAGTGGTACTTTAGGGCTTCATTCAAGAGATGTTTACAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVSSRLSDERVYVQA*SGTLGLHSRDVYRC Trigger: GCACCTGTAAACATCTCTTGAATGAAGCCCTAAAGTACCACTTCATGCCTGAACATAGACTCTCTCATCAGACAGTCTTGATGACACGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCACTCTTTCCTGTAGTACCTCCTTGTGCGATTTCCACAAGTTCACACTTTGCCACTGCCTTATTTaGGGGATGTATTTTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSCSTSLCDFHKFTLCHCLI*GMYFST Trigger: TGTAGAAAAATACATCCCCAAAATAAGGCAGTGGCA...AAGTGTGAACTTGTGGAAATCGCACAAGGAGGTACTACAGGAAAGAGTGCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | ATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTACTGCACACAGTACTTaGGGAGCACAGCGAGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: IIKSKLLVSSKYPTKLSLTAHST*GAQRGR Trigger: ACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAGT...AAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | AAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGAAAGCAGTTTCTTGTGGTTGTCATaGGGGCCACAGGTTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: KYPTKLSLHVTLRYKESSFLWLS*GPQVAT Trigger: AGTGGCAACCTGTGGCCCCAATGACAACCACAAGAA...ACTGCTTTCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | CAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAGATTCTTGTGGTTGTCATaGGGGCCACAGGTTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: QFKVPNKTESSCHFTLQRFLWLS*GPQVAT Trigger: AGTGGCAACCTGTGGCCCCAATGACAACCACAAGAA...TCTTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GCATCATCTCTAAGTCACCATTCAAAAGCCATGGGAAGTATAACTCAAGCCATTAACAACTTCTTGTGGTaGTCATTGGGGCCACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: ASSLSHHSKAMGSITQAINNFLW*SLGPQV Trigger: AACCTGTGGCCCCAATGACAACCACAAGAAGTTGTT...AATGGCTTGAGTTATACTTCCCATGGCTTTTGAATGGTGACTTAGAGATGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS CCA 90 bp | GTTCTCTTTCTCAGAAAGGTTGCCAGTGAACATAGCTTTGAAGTATaGGCTGATGCTGGCAAGGACCACTTTATGAGCATGAATTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: VLFLRKVASEHSFEV*ADAGKDHFMSMNFN Trigger: GTTAAAATTCATGCTCATAAAGTGGTCCTTGCCAGCATCAGCCCATACTTCAAAGCTATGTTCACTGGCAACCTTTCTGAGAAAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GTTTGGTGCATATATTTCTGTGCTGAAGGACATGTAATCTCTAAAACAAGAAGGTCCTGGGCTCTTTCATaGGTCTACACACAGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: VWCIYFCAEGHVISKTRRSWALS*VYTQST Trigger: AGTGGACTGTGTGTAGACCAATGAAAGAGCCCAGGA...CCTTCTTGTTTTAGAGATTACATGTCCTTCAGCACAGAAATATATGCACCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACATTACCAGGGTCAAGTaGGCTTTCAAGAAATGCACA | + |
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Preference number: 5 (lower is better) Translates to: EQAISQFKVPNKTESSCHITRVK*AFKKCT Trigger: TGTGCATTTCTTGAAAGCCAACTTGACCCTGGTAAT...GTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACGTATTTTTCTACAGATaGCAAGTAAGACTGCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: EQAISQFKVPNKTESSCHVFFYR*QVRLPV Trigger: GACGGGCAGTCTTACTTGCAATCTGTAGAAAAATAC...GTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAAAACAACTTCTTGTGGTaGTCATTGGGGCCACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKNNFLW*SLGPQV Trigger: AACCTGTGGCCCCAATGACAACCACAAGAAGTTGTT...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | ATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCCAGTGAACATAGCTTaGAAGTATGGGCTGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: IIKSKLLVSSKYPTKLSLPVNIA*KYGLML Trigger: CAGCATCAGCCCATACTTCAAAGCTATGTTCACTGG...AAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | AGCATACAAATTTACATCCAACAATCACAATCCACATTTTGTCCAGTCATACGACCAGTGAACATAGCTTaGAAGTATGGGCTGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: SIQIYIQQSQSTFCPVIRPVNIA*KYGLML Trigger: CAGCATCAGCCCATACTTCAAAGCTATGTTCACTGG...TCGTATGACTGGACAAAATGTGGATTGTGATTGTTGGATGTAAATTTGTATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS CCA 90 bp | GTCTCCGCAAAACGAGAAATTCCAATACAATTACCAGGGTCAAGTTaGCTTTCAAGAAATGCACAGCATTCTTTAAGAACGAGTTTTATC | + |
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Preference number: 5 (lower is better) Translates to: VSAKREIPIQLPGSS*LSRNAQHSLRTSFI Trigger: GATAAAACTCGTTCTTAAAGAATGCTGTGCATTTCTTGAAAGCCAACTTGACCCTGGTAATTGTATTGGAATTTCTCGTTTTGCGGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTATTACCAGGGTCAAGTaGGCTTTCAAGAAATGCACA | + |
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Preference number: 5 (lower is better) Translates to: QAISQFKVPNKTESSCHFITRVK*AFKKCT Trigger: TGTGCATTTCTTGAAAGCCAACTTGACCCTGGTAAT...AAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | CACTATATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGGTACTTCTGCCGTTCTaGTACATCGTACTTGATCCA | + |
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Preference number: 5 (lower is better) Translates to: HYIIKSKLLVSSKYPTKLVLLPF*YIVLDP Trigger: TGGATCAAGTACGATGTACAAGAACGGCAGAAGTAC...CAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTATATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTGTATTTTTCTACAGATaGCAAGTAAGACTGCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: QAISQFKVPNKTESSCHFVFFYR*QVRLPV Trigger: GACGGGCAGTCTTACTTGCAATCTGTAGAAAAATAC...AAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | CAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACAGTCCACTGATTTaGATGAGGATCATATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: QEQAISQFKVPNKTESSCHSPLI*MRIISF Trigger: GAAAGATATGATCCTCATCAAAATCAGTGGACTGTG...ACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | ATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATACATTCAAGCAGTCATaGGAGACAATTTCGTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: IKSKLLVSSKYPTKLSLHTFKQS*ETISSK Trigger: TTTGGACGAAATTGTCTCCAATGACTGCTTGAATGT...ATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GTGATGATTGACTTGTTATTTACAATCCTTAAAAGTACCCGAAGTAAAAGCAGCGAGAAGTCCAGGTGTTaGTATCAGGATTCCAACATT | + |
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Preference number: 5 (lower is better) Translates to: VMIDLLFTILKSTRSKSSEKSRC*YQDSNI Trigger: AATGTTGGAATCCTGATACAAACACCTGGACTTCTC...GCTGCTTTTACTTCGGGTACTTTTAAGGATTGTAAATAACAAGTCAATCATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTTCAAAGTACCCAACAAAACTGAGTCTTCATGTCACTTTACGTTACAAACACAGTCCACTGATTTaGATGAGGATCATATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VSSKYPTKLSLHVTLRYKHSPLI*MRIISF Trigger: GAAAGATATGATCCTCATCAAAATCAGTGGACTGTG...TTTGTAACGTAAAGTGACATGAAGACTCAGTTTTGTTGGGTACTTTGAACTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | ATAATCAAGAGCAAGCTATTAGTCAGTTCAAAGTACCCAACAAAACTGAGTCTTTCTTGTACATCGTACTaGATCCAAGATTCTAATGCA | + |
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Preference number: 5 (lower is better) Translates to: IIKSKLLVSSKYPTKLSLSCTSY*IQDSNA Trigger: TGCATTAGAATCTTGGATCAAGTACGATGTACAAGA...AAGACTCAGTTTTGTTGGGTACTTTGAACTGACTAATAGCTTGCTCTTGATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS-3UTR CAA 90 bp | GTGATGATTGACTTGTTATTTACAATCCTTAAAAGTACCCGAAGTAAAAGCAGCTCTTGTACATCGTACTaGATCCAAGATTCTAATGCA | + |
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Preference number: 5 (lower is better) Translates to: VMIDLLFTILKSTRSKSSSCTSY*IQDSNA Trigger: TGCATTAGAATCTTGGATCAAGTACGATGTACAAGA...GCTGCTTTTACTTCGGGTACTTTTAAGGATTGTAAATAACAAGTCAATCATCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222508.2 |
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| CDS CCA 72 bp | CCACACTGTTCATGTGAGCGGGGCCATAGCCTCCAATaGCGTATAGCATTCCATCCAGGACAGCTGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PHCSCERGHSLQ*RIAFHPGQLQQ Trigger: TTGCTGCAGCTGTCCTGGATGGAATGCTATACGCCATTGGAGGCTATGGCCCCGCTCACATGAACAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS GCA 72 bp | CGTACTCCACAATGGCCTGCAGCGCAGCTTCATCGATaGACTGAAACTCAACCTCACTGTTCTCTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RTPQWPAAQLHR*TETQPHCSLSQ Trigger: CTGAGAAAGAGAACAGTGAGGTTGAGTTTCAGTGCATCGATGAAGCTGCGCTGCAGGCCATTGTGGAGTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CCA 72 bp | TTCCATCCAGGACAGCTGCAGCAAAACAACTTCTTGTaGTTGTCATTGGGGCCACAGGTTGCCACTGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: FHPGQLQQNNFL*LSLGPQVATAL Trigger: TAAGGCAGTGGCAACCTGTGGCCCCAATGACAACCACAAGAAGTTGTTTTGCTGCAGCTGTCCTGGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS TCA 72 bp | CTGCTGGCAGGAGAGATTCAACTGTGTCCTGAGAAATaGAAACTGTGCCCGTATAGGCGTACTCCACAATGG | + |
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Preference number: 6 (lower is better) Translates to: LLAGEIQLCPEK*KLCPYRRTPQW Trigger: CCATTGTGGAGTACGCCTATACGGGCACAGTTTTCATTTCTCAGGACACAGTTGAATCTCTCCTGCCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS GCA 72 bp | ATCCAAACAGGCAAAGAGTCCAGATTTTCCTCCTACTaGACACAGTACTTTGGGAGCACAGCGAGGTCGTGT | + |
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Preference number: 6 (lower is better) Translates to: IQTGKESRFSSY*TQYFGSTARSC Trigger: ACACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAGTAGGAGGAAAATCTGGACTCTTTGCCTGTTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CCA 72 bp | AGAGTCCAGATTTTCCTCCTACTGCACACAGTACTTTaGGAGCACAGCGAGGTCGTGTCATCAAGACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RVQIFLLLHTVL*EHSEVVSSRLS Trigger: AGACAGTCTTGATGACACGACCTCGCTGTGCTCCCAAAGTACTGTGTGCAGTAGGAGGAAAATCTGGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CAA 72 bp | CATCCAGGACAGCTGCAGCAAAACAACTTCTTGTGGTaGTCATTGGGGCCACAGGTTGCCACTGCCTTATTT | + |
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Preference number: 6 (lower is better) Translates to: HPGQLQQNNFLW*SLGPQVATALF Trigger: AAATAAGGCAGTGGCAACCTGTGGCCCCAATGACAACCACAAGAAGTTGTTTTGCTGCAGCTGTCCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS TCA 72 bp | ACGAAAATAAAACCTAGCATGACTCCGACGCCAAAGTaGATCCTCTTATCAGCCATGGGCGCAACCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: TKIKPSMTPTPK*ILLSAMGATIS Trigger: GGAGATGGTTGCGCCCATGGCTGATAAGAGGATTCACTTTGGCGTCGGAGTCATGCTAGGTTTTATTTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CCA 72 bp | TACTGCAGCACCAACTCCTGTCCTGGGCTCTTTCATTaGTCTACACACAGTCCACTGATTTTGATGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: YCSTNSCPGLFH*STHSPLILMRI Trigger: GATCCTCATCAAAATCAGTGGACTGTGTGTAGACCAATGAAAGAGCCCAGGACAGGAGTTGGTGCTGCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS TCA 72 bp | ACATCACCTACTCGAAGAATGATGTCACAGAGTTCGTaGTGCTGGCGAAGAAGATTCAATCCCTGCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPTRRMMSQSS*CWRRRFNPCRS Trigger: ACTTCTGCAGGGATTGAATCTTCTTCGCCAGCATCACGAACTCTGTGACATCATTCTTCGAGTAGGTGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS GCA 72 bp | AACCGTACACTGTTCAGCAGCTGGGCTAAGTACTTCTaGCGTTCTTGTACATCGTACTTGATCCAAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: NRTLFSSWAKYF*RSCTSYLIQDS Trigger: AGAATCTTGGATCAAGTACGATGTACAAGAACGGCAGAAGTACTTAGCCCAGCTGCTGAACAGTGTACGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CAA 72 bp | GGCTCTCGTTCATTCTCTCGAGAGAAGTCCAGGTGTTaGTATCAGGATTCCAACATTCCACTGAATTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSRSFSREKSRC*YQDSNIPLNFH Trigger: ATGAAAATTCAGTGGAATGTTGGAATCCTGATACAAACACCTGGACTTCTCTCGAGAGAATGAACGAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS TCA 72 bp | TCAAGACTGTCTGATGAGAGAGTCTATGTTCAGGCATaGAGTGGTACTTTAGGGCTTCATTCAAGAGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRLSDERVYVQA*SGTLGLHSRDV Trigger: AACATCTCTTGAATGAAGCCCTAAAGTACCACTTCATGCCTGAACATAGACTCTCTCATCAGACAGTCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CAA 72 bp | AAAACTGTCTCTTCAGTAGCCACATTCAAGCAGTCATaGGAGACAATTTCGTCCAAATCAGCATGTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: KTVSSVATFKQS*ETISSKSACVS Trigger: GCTTACACATGCTGATTTGGACGAAATTGTCTCCAATGACTGCTTGAATGTGGCTACTGAAGAGACAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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| CDS CAA 90 bp | AGTCTCCGCAAAACGAGAAATTCCAATACAATTACCAGGGTCAAGTaGGCTTTCAAGAAATGCACAGCATTCTTTAAGAACGAGTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SLRKTRNSNTITRVK*AFKKCTAFFKNEFY Trigger: ATAAAACTCGTTCTTAAAGAATGCTGTGCATTTCTTGAAAGCCAACTTGACCCTGGTAATTGTATTGGAATTTCTCGTTTTGCGGAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021331.9 ENSMUST00000222508.2 |
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