RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL25 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055652

Ensembl transcript IDs: ENSMUST00000092073.11, ENSMUST00000171155.4, ENSMUST00000205612.2, ENSMUST00000205887.2, ENSMUST00000206019.2

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTaGTGGGCCAAGGGACCCCTGCTCTTCCCTGGTAGCCATTGCCAG +
Preference number: 1 (lower is better)
Translates to: NIPTSHRQPYSQRLC*WAKGPLLFPGSHCQ
Trigger: CTGGCAATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCCAGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 90 bp AGAAACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTaGTGCTGGGCCAAGGGACCCCTGCTCTTCCCTGGTAGCCATTGC +
Preference number: 1 (lower is better)
Translates to: RNIPTSHRQPYSQRL*CWAKGPLLFPGSHC
Trigger: GCAATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCCAGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 90 bp CTGGAGAACTTCATTTCTCTGCCTAGAGTTAAGGACAGCTTGAGCTaGTGCCGCCTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: LENFISLPRVKDSLS*CRLGLELSASGPGR
Trigger: CCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAGGCGGCAGCAGCTCAAGCTGTCCTTAACTCTAGGCAGAGAAATGAAGTTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 90 bp TGGGCCAAGGGACCCCTGCTCTTCCCTGGTAGCCATTGCCAGGCCTaGGTGACAATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTG +
Preference number: 1 (lower is better)
Translates to: WAKGPLLFPGSHCQA*VTISLKALHKCRWL
Trigger: CAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGCCTGGCAATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 90 bp ACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCCGTCTaGGGATCAGAACAGCCACGTCACTTCATTAGACCTCACTTCGTC +
Preference number: 1 (lower is better)
Translates to: TAAGLTDTCPVVGPV*GSEQPRHFIRPHFV
Trigger: GACGAAGTGAGGTCTAATGAAGTGACGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR CCA 90 bp CTCTTAGCAGTGTCTGGCTGGTCACAGGCATCTGCCCTATGTCCATaGAAGCTTCCCAGAAGTCGCCTCTTAGGAGGGGGAGCTAGTGCT +
Preference number: 1 (lower is better)
Translates to: LLAVSGWSQASALCP*KLPRSRLLGGGASA
Trigger: AGCACTAGCTCCCCCTCCTAAGAGGCGACTTCTGGGAAGCTTCCATGGACATAGGGCAGATGCCTGTGACCAGCCAGACACTGCTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 90 bp TTCGTCAGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTaGACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATA +
Preference number: 1 (lower is better)
Translates to: FVRMAAGLHGPSSLH*TQKTDTTSPTDKPI
Trigger: TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCTGACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR CCA 90 bp GATCAGAACAGCCACGTCACTTCATTAGACCTCACTTCGTCAGAATaGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGA +
Preference number: 1 (lower is better)
Translates to: DQNSHVTSLDLTSSE*LLVYMGLHPSTAHR
Trigger: TCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCTGACGAAGTGAGGTCTAATGAAGTGACGTGGCTGTTCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR GCA 90 bp TACCATCTGTTGATGAAGCCTTGTGGGTACCATCTGAGGCCGGGTTaGCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCAGTTAGAC +
Preference number: 1 (lower is better)
Translates to: YHLLMKPCGYHLRPG*PGGSVPYKICLQLD
Trigger: GTCTAACTGAAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTACCCACAAGGCTTCATCAACAGATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR TCA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACGGGTTCCAGCCCTCCTaGGGGCTCACCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDGFQPS*GLTWLG
Trigger: GCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCC...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR-3UTR CCA 90 bp GGCCTGGGTGACAATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCTGCCGCCTGGGGCTaGAGCTGTCAGCTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: GLGDNQPQGSAQMSLVAGAAAWG*SCQLLA
Trigger: GGCCAGAAGCTGACAGCTCCAGCCCCAGGCGGCAGC...ACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CAA 90 bp GCCTGGGTGACAATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTaGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGAG +
Preference number: 2 (lower is better)
Translates to: AWVTISLKALHKCRW*LVPARASGRFSPHE
Trigger: CTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR TCA 90 bp CCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAAGGGTTCCAGCCCTCCTaGGGGCTCACCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PSSLHCTQKTDTTSPTDKGFQPS*GLTWLG
Trigger: GCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCC...TTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR-3UTR CCA 90 bp CTAGTGCTTGACAGAGGGCACACAGGCCATCTCCCCTTGACCTTAGGGGTCTGGGGAGCTGTCAGCTTCTaGCCCAGGCAGGAGGAACCA +
Preference number: 2 (lower is better)
Translates to: LVLDRGHTGHLPLTLGVWGAVSF*PRQEEP
Trigger: TGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCC...CCAGACCCCTAAGGTCAAGGGGAGATGGCCTGTGTGCCCTCTGTCAAGCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp CCTGATGTCCAGGAGACTATGGAGAAACATTCCCACCTCCCACAGGCAGCCCTAAAGGACAGCTTGAGCTaGTGCCGCCTGGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PDVQETMEKHSHLPQAALKDSLS*CRLGLE
Trigger: CTCCAGCCCCAGGCGGCAGCAGCTCAAGCTGTCCTT...TAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp GGAGAAACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTGCTAGGAACCACGCAGTCTaGCTGGGCTCCAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: GETFPPPTGSPTVKGCAARNHAV*LGSKGA
Trigger: GGCACCTTTGGAGCCCAGCCAGACTGCGTGGTTCCT...AGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp GATGGCATAGTCCACAGGCCAGGAGCCAGTAATTCTCCAGCAAGACTGTCCCTGGCCAGCCCGTGCCTCTaGACGCTTCTCTCCACACGA +
Preference number: 2 (lower is better)
Translates to: DGIVHRPGASNSPARLSLASPCL*TLLSTR
Trigger: TCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGC...CAGGGACAGTCTTGCTGGAGAATTACTGGCTCCTGGCCTGTGGACTATGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CAA 90 bp GTGACGCTGGAGAACTTCATTTCTCTGCCTAGAGTTAAGGACAGCTaGAGCTGCTGCCGCCTGGGGCTGGAGCTGTCAGCTTCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: VTLENFISLPRVKDS*SCCRLGLELSASGP
Trigger: TGGGCCAGAAGCTGACAGCTCCAGCCCCAGGCGGCAGCAGCTCAAGCTGTCCTTAACTCTAGGCAGAGAAATGAAGTTCTCCAGCGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp TACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTGACAGCTTGAGCTGCTaGCGCCTGGGGCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: YHLRPGCPGGSVPYKICLDSLSC*RLGLEL
Trigger: CAGCTCCAGCCCCAGGCGGCAGCAGCTCAAGCTGTC...AAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp GATCAGAACCCACTCTGGATGCTCCGTCCTGATGCAGTAATGGGAAGCCACCAAGGGCCAAGGGACCCCTaGTCTTCCCTGGTAGCCATT +
Preference number: 2 (lower is better)
Translates to: DQNPLWMLRPDAVMGSHQGPRDP*SSLVAI
Trigger: AATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCC...TTGGTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGGGTTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATAACCTCTGTGCAAACTaGAGTGACCGTGGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDNLCAN*SDRGSP
Trigger: GGGACTCCCACGGTCACTGCAGTTTGCACAGAGGTT...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR TCA 90 bp GGGAGCCTTGGTCCTAGATCCACAATGACAGCAATACAACCTCTGTGCAAACTGGGGGGAGCTAGTGCTTaGCAGAGGGCACACAGGCCA +
Preference number: 2 (lower is better)
Translates to: GSLGPRSTMTAIQPLCKLGGASA*QRAHRP
Trigger: TGGCCTGTGTGCCCTCTGTCAAGCACTAGCTCCCCC...CAGTTTGCACAGAGGTTGTATTGCTGTCATTGTGGATCTAGGACCAAGGCTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp GATGGCATAGTCCACAGGCCAGGAGCCAGTAATTCTCCAGCAAGACTGTCCCTGTCTGCCCTATGTCCATaGAAGCTTCCCAGAAGTCGC +
Preference number: 2 (lower is better)
Translates to: DGIVHRPGASNSPARLSLSALCP*KLPRSR
Trigger: GCGACTTCTGGGAAGCTTCCATGGACATAGGGCAGA...CAGGGACAGTCTTGCTGGAGAATTACTGGCTCCTGGCCTGTGGACTATGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp AGACACCTGTCCTGTGGTAGGCCCCGTCTGAGGATCAGAACAGCCACGTCACTTCGTCAGAATGGCTGCTaGTTTACATGGGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: RHLSCGRPRLRIRTATSLRQNGC*FTWAFI
Trigger: GATGAAGGCCCATGTAAACCAGCAGCCATTCTGACG...AAGTGACGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR-3UTR GCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGTCAGCCTCAAGGCTCTaGACAAATGTCGTTGGTTGC +
Preference number: 2 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQSASRL*TNVVGC
Trigger: GCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGTTCCCTGGTAGCCATTaGCAGGCCTGGGTGACAATC +
Preference number: 2 (lower is better)
Translates to: NKSNTHAQASTMARSSVLFPGSH*QAWVTI
Trigger: GATTGTCACCCAGGCCTGGCAATGGCTACCAGGGAA...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp GATCAGAACCCACTCTGGATGCTCCGTCCTGATGCAGTAATGGGAAGCCACCAAACTCTTAGCAGTGTCTaGCTGGTCACAGGCATCTGC +
Preference number: 2 (lower is better)
Translates to: DQNPLWMLRPDAVMGSHQTLSSV*LVTGIC
Trigger: GCAGATGCCTGTGACCAGCCAGACACTGCTAAGAGT...TTGGTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGGGTTCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGACTCTTAGCAGTGTCTaGCTGGTCACAGGCATCTGC +
Preference number: 2 (lower is better)
Translates to: NKSNTHAQASTMARSSVLTLSSV*LVTGIC
Trigger: GCAGATGCCTGTGACCAGCCAGACACTGCTAAGAGT...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATTCTGCCCTATGTCCATaGAAGCTTCCCAGAAGTCGC +
Preference number: 2 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHSALCP*KLPRSR
Trigger: GCGACTTCTGGGAAGCTTCCATGGACATAGGGCAGA...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATTCAGCCTCAAGGCTCTaGACAAATGTCGTTGGTTGC +
Preference number: 2 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHSASRL*TNVVGC
Trigger: GCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCGCTGCCGCCTGGGGCTaGAGCTGTCAGCTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TFIKLETNKSNTHAQASTAAAWG*SCQLLA
Trigger: GGCCAGAAGCTGACAGCTCCAGCCCCAGGCGGCAGC...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR TCA 90 bp AGTTTCTTCGGATCCTTCTTTCTGAGCTCAAGGAAGAAAATCAGACAGGATTCACTGTGCAAACTGCAGTaGCCGTGGGAGTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: SFFGSFFLSSRKKIRQDSLCKLQ*PWESLC
Trigger: GCAGAGGGACTCCCACGGTCACTGCAGTTTGCACAG...TGAATCCTGTCTGATTTTCTTCCTTGAGCTCAGAAAGAAGGATCCGAAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATATGTCCAGGAGACTATaGAGAAACATTCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHMSRRL*RNIPTS
Trigger: GGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACAT...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR TCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCCTGTGCAAACTGCAGTaGCCGTGGGAGTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TFIKLETNKSNTHAQASTLCKLQ*PWESLC
Trigger: GCAGAGGGACTCCCACGGTCACTGCAGTTTGCACAG...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR GCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCGGGCCAAGGGACCCCTaGTCTTCCCTGGTAGCCATT +
Preference number: 2 (lower is better)
Translates to: TFIKLETNKSNTHAQASTGPRDP*SSLVAI
Trigger: AATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCC...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CCA 90 bp AGTTTCTTCGGATCCTTCTTTCTGAGCTCAAGGAAGAAAATCAGACAGGATTCAAGCCATTGCCAGGCCTaGGTGACAATCAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: SFFGSFFLSSRKKIRQDSSHCQA*VTISLK
Trigger: CTTGAGGCTGATTGTCACCCAGGCCTGGCAATGGCT...TGAATCCTGTCTGATTTTCTTCCTTGAGCTCAGAAAGAAGGATCCGAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp CCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTaGTGCTGGGCCAAGGGACCCCTGCTCTTCCCTGGT +
Preference number: 3 (lower is better)
Translates to: PTSHRQPYSQRL*CWAKGPLLFPG
Trigger: ACCAGGGAAGAGCAGGGGTCCCTTGGCCCAGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp ACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTaGTGGGCCAAGGGACCCCTGCTCTTCCCTGGTAGC +
Preference number: 3 (lower is better)
Translates to: TSHRQPYSQRLC*WAKGPLLFPGS
Trigger: GCTACCAGGGAAGAGCAGGGGTCCCTTGGCCCAGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp TGGGCCAAGGGACCCCTGCTCTTCCCTGGTAGCCATTaGCAGGCCTGGGTGACAATCAGCCTCAAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: WAKGPLLFPGSH*QAWVTISLKAL
Trigger: CAGAGCCTTGAGGCTGATTGTCACCCAGGCCTGGCAATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp TCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTGCTaGGCCAAGGGACCCCTGCTCTTCCCTGGTAGCCAT +
Preference number: 3 (lower is better)
Translates to: SHRQPYSQRLCC*AKGPLLFPGSH
Trigger: ATGGCTACCAGGGAAGAGCAGGGGTCCCTTGGCCCAGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp GCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTaGCAGCCCGTGCCTCTGGACGCTTCTCTCCACACG +
Preference number: 3 (lower is better)
Translates to: ASRLCTNVVGCW*QPVPLDASLHT
Trigger: CGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp CAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCTaGACGCTTCTCTCCACACGAGCCGCTGCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: QMSLVAGASPCL*TLLSTRAAASF
Trigger: AAAGCTGGCAGCGGCTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CAA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGAGAGTTAAGGACAGCTaGAGCTGCTGCCGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQRVKDS*SCCRLG
Trigger: CCCCAGGCGGCAGCAGCTCAAGCTGTCCTTAACTCT...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp ATTTCTCTGCCTAGAGTTAAGGACAGCTTGAGCTGCTaGCGCCTGGGGCTGGAGCTGTCAGCTTCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: ISLPRVKDSLSC*RLGLELSASGP
Trigger: TGGGCCAGAAGCTGACAGCTCCAGCCCCAGGCGGCAGCAGCTCAAGCTGTCCTTAACTCTAGGCAGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp CAATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTaGTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: QSASRLCTNVVG*WCQPVPLDASL
Trigger: GAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp GTGACAATCAGCCTCAAGGCTCTGCACAAATGTCGTTaGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTC +
Preference number: 3 (lower is better)
Translates to: VTISLKALHKCR*LLVPARASGRF
Trigger: GAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp GGACCCCTGCTCTTCCCTGGTAGCCATTGCCAGGCCTaGGTGACAATCAGCCTCAAGGCTCTGCACAAATGT +
Preference number: 3 (lower is better)
Translates to: GPLLFPGSHCQA*VTISLKALHKC
Trigger: ACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGCCTGGCAATGGCTACCAGGGAAGAGCAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 72 bp CCCTGCTCTTCCCTGGTAGCCATTGCCAGGCCTGGGTaGCAATCAGCCTCAAGGCTCTGCACAAATGTCGTT +
Preference number: 3 (lower is better)
Translates to: PCSSLVAIARPG*QSASRLCTNVV
Trigger: AACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGCCTGGCAATGGCTACCAGGGAAGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp TTCATTTCTCTGCCTAGAGTTAAGGACAGCTTGAGCTaGTGCCGCCTGGGGCTGGAGCTGTCAGCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: FISLPRVKDSLS*CRLGLELSASG
Trigger: GCCAGAAGCTGACAGCTCCAGCCCCAGGCGGCAGCAGCTCAAGCTGTCCTTAACTCTAGGCAGAGAAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp GACCTAGAGTCCTGCTGGGGGACTCTTAGCAGTGTCTaGCTGGTCACAGGCATCTGCCCTATGTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: DLESCWGTLSSV*LVTGICPMSME
Trigger: TTCCATGGACATAGGGCAGATGCCTGTGACCAGCCAGACACTGCTAAGAGTCCCCCAGCAGGACTCTAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp CTCCGTCCTGATGCAGTAATGGGAAGCCACCAACGATaGAACACTCCCCATCCTGTGCCGGAAACCAAGAGC +
Preference number: 3 (lower is better)
Translates to: LRPDAVMGSHQR*NTPHPVPETKS
Trigger: GCTCTTGGTTTCCGGCACAGGATGGGGAGTGTTCCATCGTTGGTGGCTTCCCATTACTGCATCAGGACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CAA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGAGAGTTAAGGACAGCTaGAGCTGCTGCCGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: NKSNTHAQASTMARSSVLRVKDS*SCCRLG
Trigger: CCCCAGGCGGCAGCAGCTCAAGCTGTCCTTAACTCT...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp CTGCAACTCCACTTCCGTCCAGATCAGAACCCACTCTaGATGCTCCGTCCTGATGCAGTAATGGGAAGCCAC +
Preference number: 3 (lower is better)
Translates to: LQLHFRPDQNPL*MLRPDAVMGSH
Trigger: GTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGGGTTCTGATCTGGACGGAAGTGGAGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp AGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTaGACCTCAGATGAGGGCCAGTGTGTGACTAAGTCA +
Preference number: 3 (lower is better)
Translates to: SKTVPEVEWEAS*TSDEGQCVTKS
Trigger: TGACTTAGTCACACACTGGCCCTCATCTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 72 bp ACGAGCCGCTGCCAGCTTTGGACACCAGAGCACAGGTaGCGCTGGAGAACTTCATTTCTCTGCCTAGAGTTA +
Preference number: 3 (lower is better)
Translates to: TSRCQLWTPEHR*RWRTSFLCLEL
Trigger: TAACTCTAGGCAGAGAAATGAAGTTCTCCAGCGTCACCTGTGCTCTGGTGTCCAAAGCTGGCAGCGGCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR GCA 72 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTaGACACAGAAGACAGACACTACCTCTCCCACTGAC +
Preference number: 3 (lower is better)
Translates to: MAAGLHGPSSLH*TQKTDTTSPTD
Trigger: GTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR TCA 72 bp AGCAGTAGTAGGCTGAGCTGTGAGGACCTTGAAGGCTaGCCAAACTGGTCTGTACTGCAACTCCACTTCCGT +
Preference number: 3 (lower is better)
Translates to: SSSRLSCEDLEG*PNWSVLQLHFR
Trigger: ACGGAAGTGGAGTTGCAGTACAGACCAGTTTGGTCAGCCTTCAAGGTCCTCACAGCTCAGCCTACTACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 72 bp TGTGTGACTAAGTCACCTACGCCAGCAGTAGTAGGCTaGGCTGTGAGGACCTTGAAGGCTGACCAAACTGGT +
Preference number: 3 (lower is better)
Translates to: CVTKSPTPAVVG*AVRTLKADQTG
Trigger: ACCAGTTTGGTCAGCCTTCAAGGTCCTCACAGCTCAGCCTACTACTGCTGGCGTAGGTGACTTAGTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp TCAGTTAGACTATGCTCCCTGATGTCCAGGAGACTATaGAGAAACATTCCCACCTCCCACAGGCAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: SVRLCSLMSRRL*RNIPTSHRQPY
Trigger: GTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGGGAGCATAGTCTAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CAA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATTCTGTTGATGAAGCCTaGTGGGTACCATCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHSVDEA*WVPSEA
Trigger: GGCCTCAGATGGTACCCACAAGGCTTCATCAACAGA...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 72 bp ACAATGACAGCAATACAACCTCTGTGCAAACTGCAGTaGCCGTGGGAGTCCCTCTGCCATTCGACTCATGAC +
Preference number: 3 (lower is better)
Translates to: TMTAIQPLCKLQ*PWESLCHSTHD
Trigger: GTCATGAGTCGAATGGCAGAGGGACTCCCACGGTCACTGCAGTTTGCACAGAGGTTGTATTGCTGTCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp CTAATAAAAGCAACACCCATGCTCAGGCAAGCACCATaGCTAGGTCCTCTGTGCTGTGCAGACCGATTAGTG +
Preference number: 3 (lower is better)
Translates to: LIKATPMLRQAP*LGPLCCADRLV
Trigger: CACTAATCGGTCTGCACAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR-3UTR CAA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCCCATCTGAGGCCGGGTaGCCCTGGGGGTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: TFIKLETNKSNTHAQASTPSEAG*PWGFCP
Trigger: GGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGG...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 72 bp AAACCTAATGCCGGGGAGACACTGGGGAGGAATCCTTaGGAAACACATTTGGGAAGTTTCTTCGGATCCTTC +
Preference number: 3 (lower is better)
Translates to: KPNAGETLGRNP*ETHLGSFFGSF
Trigger: GAAGGATCCGAAGAAACTTCCCAAATGTGTTTCTCAAGGATTCCTCCCCAGTGTCTCCCCGGCATTAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CCA 72 bp GAAAGTGTCTCCGAAAACCTAATGCCGGGGAGACACTaGGGAGGAATCCTTGAGAAACACATTTGGGAAGTT +
Preference number: 3 (lower is better)
Translates to: ESVSENLMPGRH*GGILEKHIWEV
Trigger: AACTTCCCAAATGTGTTTCTCAAGGATTCCTCCCCAGTGTCTCCCCGGCATTAGGTTTTCGGAGACACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR TCA 72 bp ACCTCTCCCACTGACAAACCCATAACTGGTAAGATATaGACAGACCGTCTGTCCCTAAATCCCATTACCCTG +
Preference number: 3 (lower is better)
Translates to: TSPTDKPITGKI*TDRLSLNPITL
Trigger: CAGGGTAATGGGATTTAGGGACAGACGGTCTGTTCATATCTTACCAGTTATGGGTTTGTCAGTGGGAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp CGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGAGCCGTGCACTCGTCCGCCATaGGGAGGGCCTCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: RWLLVPARASGRFSPHEPCTRPP*GGPLQI
Trigger: TATCTGGAGAGGCCCTCCTCATGGCGGACGAGTGCA...CGGCTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp CTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGTCATGGAGCCCGTGCTaGTCCTCGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGLELSASGPGRRNHAVWSWSPC*SSTCGS
Trigger: AGACCCGCAAGTCGAGGAGCAGCACGGGCTCCATGA...CCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTCCTTCCGGGGGCTTaGCAGATCTGCCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LGLELSASGPGRRNHAVWLLPGA*QICLGD
Trigger: ATCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAG...CCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp TCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTCCAAAGGTGCCTTGCACTCGTCCGCCATaGGGAGGGCCTCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: SEGSSPPEGSPGWAPKVPCTRPP*GGPLQI
Trigger: TATCTGGAGAGGCCCTCCTCATGGCGGACGAGTGCA...AGGCACCTTTGGAGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp TGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCTTGTTCATGGAGCCCGTaGTGCTCCTCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: WSCQLLAQAGGTTQSGWACSWSP*CSSTCG
Trigger: CCCGCAAGTCGAGGAGCAGCACGGGCTCCATGAACA...AGCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp CTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCAGACAGCACCATCATaGCAAGGCAGTTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGLELSASGPGRRNHAVWQTAPS*QGSWRG
Trigger: CCCCCTCCAACTGCCTTGGCATGATGGTGCTGTCTG...CCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp TGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCTAGCTCGGCTGAGCCATaGCCAAAGCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: WSCQLLAQAGGTTQSGWASSAEP*PKRAIS
Trigger: GCTGATTGCCCGCTTTGGCCATGGCTCAGCCGAGCT...AGCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGAGCCGAGACTGAGATGTTCATaGAGCCCGTGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RWLLVPARASGRFSPHEPRLRCS*SPCCSS
Trigger: CGAGGAGCAGCACGGGCTCCATGAACATCTCAGTCT...CGGCTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCCCCATGATGAAGATCTaGCTGCCCAGGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: HSTDNSSGAHRHLSCGRPPMMKI*LPRTAA
Trigger: CGCCGCTGTCCTGGGCAGCCAGATCTTCATCATGGG...GGGCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp CTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCCAATCCGCGTCCACTaGTTGGTCTCACAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LGLELSASGPGRRNHAVWPIRVH*LVSQSK
Trigger: CTTCGACTGTGAGACCAACCAGTGGACGCGGATTGG...CCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CTCACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCCGCAGGCCGTGGCTaGACATGGCCTCAAAGTATC +
Preference number: 4 (lower is better)
Translates to: LTALTTAAGLTDTCPVVGPAGRG*TWPQSI
Trigger: GATACTTTGAGGCCATGTTCAGCCACGGCCTGCGGG...GCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp CCTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGCCACATACAGCTTGTTaGCTGAAGCCACGGCATGAC +
Preference number: 4 (lower is better)
Translates to: PGAGAVSFWPRQEEPRSLPHTAC*LKPRHD
Trigger: GTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGG...CAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CTCACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCAGCTCGGCTGAGCCATaGCCAAAGCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: LTALTTAAGLTDTCPVVGSSAEP*PKRAIS
Trigger: GCTGATTGCCCGCTTTGGCCATGGCTCAGCCGAGCT...GCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp AATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGCCCATGATGAAGATCTaGCTGCCCAGGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: NVVGCWCQPVPLDASLHTPMMKI*LPRTAA
Trigger: CGCCGCTGTCCTGGGCAGCCAGATCTTCATCATGGG...CGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCTTCCGTGAACATGCAGTaGTTGCGCAGAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WSCQLLAQAGGTTQSGWASVNMQ*LRRVLR
Trigger: CCTCAACACTCTGCGCAAGCACTGCATGTTCACGGA...AGCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATGTGTGTGACCTGCCTTaGGAGGCCGGGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDVCDLP*EAGQRD
Trigger: GTCCCTTTGCCCGGCCTCGCAAGGCAGGTCACACAC...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCCATTCAGCAAGATCTTaGTCTTGCAGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LELSASGPGRRNHAVWLGHSARS*SCSGRP
Trigger: AGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATG...GCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CAA 72 bp TCTGGACGCTTCTCTCCACACGAGCCGCTGCCAGCTTaGGACACCAGAGCACAGGTGACGCTGGAGAACTTC +
Preference number: 4 (lower is better)
Translates to: SGRFSPHEPLPA*DTRAQVTLENF
Trigger: GAAGTTCTCCAGCGTCACCTGTGCTCTGGTGTCCAAAGCTGGCAGCGGCTCGTGTGGAGAGAAGCGTCCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
3UTR CAA 72 bp GACCTTAGGGGTCTGGTACCATCTGTTGATGAAGCCTaGTGGGTACCATCTGAGGCCGGGTTGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DLRGLVPSVDEA*WVPSEAGLPWG
Trigger: CCCCCAGGGCAACCCGGCCTCAGATGGTACCCACAAGGCTTCATCAACAGATGGTACCAGACCCCTAAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CTAGTGCTTGACAGAGGGCACACAGGCCATCTCCCCTTGACCTTAGGGGTCTGGCAATCGCTGAAGCACTaGACTCCTTCCGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLDRGHTGHLPLTLGVWQSLKH*TPSGGL
Trigger: CAAGCCCCCGGAAGGAGTTCAGTGCTTCAGCGATTG...CCAGACCCCTAAGGTCAAGGGGAGATGGCCTGTGTGCCCTCTGTCAAGCACTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCCTTGCAACCAATCGCTaGAGCACTGAACTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HSTDNSSGAHRHLSCGRPLATNR*STELLP
Trigger: CGGAAGGAGTTCAGTGCTTCAGCGATTGGTTGCAAG...GGGCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp CACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCATACAGCTTGTTGCCTaGAGCCACGGCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: HSTDNSSGAHRHLSCGRPIQLVA*SHGMTG
Trigger: TCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTAT...GGGCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATTGTTCATGGAGCCCGTaGTGCTCCTCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDCSWSP*CSSTCG
Trigger: CCCGCAAGTCGAGGAGCAGCACGGGCTCCATGAACA...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCAGACAGCACCATCATaGCAAGGCAGTTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SASRLCTNVVGCWCQPVPQTAPS*QGSWRG
Trigger: CCCCCTCCAACTGCCTTGGCATGATGGTGCTGTCTG...AGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp CGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGAGCCGCAGTCACATAGACCTTaGAACCAATCGCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RWLLVPARASGRFSPHEPQSHRP*NQSLKH
Trigger: GTGCTTCAGCGATTGGTTGCAAGGTCTATGTGACTG...CGGCTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCGGGTGCAGGTTGTCCTaGAAGTTGACCGTATCATCC +
Preference number: 4 (lower is better)
Translates to: HSTDNSSGAHRHLSCGRPGCRLS*KLTVSS
Trigger: GGATGATACGGTCAACTTCCAGGACAACCTGCACCC...GGGCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATAGCTCGGCTGAGCCATaGCCAAAGCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDSSAEP*PKRAIS
Trigger: GCTGATTGCCCGCTTTGGCCATGGCTCAGCCGAGCT...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGAGCCGCAAAGAGTTTCAGCTTaGCACTCACCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RWLLVPARASGRFSPHEPQRVSA*HSPLQH
Trigger: ATGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTG...CGGCTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCAAAGAGTTTCAGCTTaGCACTCACCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LGLELSASGPGRRNHAVWQRVSA*HSPLQH
Trigger: ATGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTG...CCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp GGAGAAACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTGCTCCCATGATGAAGATCTaGCTGCCCAGGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GETFPPPTGSPTVKGCAAPMMKI*LPRTAA
Trigger: CGCCGCTGTCCTGGGCAGCCAGATCTTCATCATGGG...AGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGGCTTGCGCAGAGTGTTaGGGTGGGCCAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQACAEC*GGPAHS
Trigger: ACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGC...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CCACTCTGGATGCTCCGTCCTGATGCAGTAATGGGAAGCCACCAACGATGGAACGCTTGCGCAGAGTGTTaGGGTGGGCCAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: PLWMLRPDAVMGSHQRWNACAEC*GGPAHS
Trigger: ACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGC...GTTCCATCGTTGGTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp GGCCTGGGTGACAATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTCCCGCAGGCCGTGGCTaGACATGGCCTCAAAGTATC +
Preference number: 4 (lower is better)
Translates to: GLGDNQPQGSAQMSLVAGPAGRG*TWPQSI
Trigger: GATACTTTGAGGCCATGTTCAGCCACGGCCTGCGGG...ACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp GGCCTGGGTGACAATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTAGGAGCAGGGGCAGGTaGGCCTTCCTCTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: GLGDNQPQGSAQMSLVAGRSRGR*AFLCSK
Trigger: CTTAGAGCAGAGGAAGGCTCACCTGCCCCTGCTCCT...ACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATTGTCACCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AGACACCTGTCCTGTGGTAGGCCCCGTCTGAGGATCAGAACAGCCACGTCACTTCAATCGCTGAAGCACTaGACTCCTTCCGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RHLSCGRPRLRIRTATSLQSLKH*TPSGGL
Trigger: CAAGCCCCCGGAAGGAGTTCAGTGCTTCAGCGATTG...AAGTGACGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp AATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGCTTGCAACCAATCGCTaGAGCACTGAACTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: NVVGCWCQPVPLDASLHTLATNR*STELLP
Trigger: CGGAAGGAGTTCAGTGCTTCAGCGATTGGTTGCAAG...CGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AGCAGAGATAAGTCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTATACAGCTTGTTGCCTaGAGCCACGGCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: SRDKSEGSSPPEGSPGWAIQLVA*SHGMTG
Trigger: TCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTAT...AGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGACTTATCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp CCTGATGTCCAGGAGACTATGGAGAAACATTCCCACCTCCCACAGGCAGCCCTATCATGGAGCCCGTGCTaGTCCTCGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PDVQETMEKHSHLPQAALSWSPC*SSTCGS
Trigger: AGACCCGCAAGTCGAGGAGCAGCACGGGCTCCATGA...TAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp GCTCACAGACACCTGTCCTGTGGTAGGCCCCGTCTGAGGATCAGAACAGCCACGCGGACATCATGGAACTaGAGCATGTCACCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AHRHLSCGRPRLRIRTATRTSWN*SMSPAS
Trigger: AGAGGCTGGTGACATGCTGCAGTTCCATGATGTCCG...CGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp GCTCACAGACACCTGTCCTGTGGTAGGCCCCGTCTGAGGATCAGAACAGCCACGCCACATACAGCTTGTTaGCTGAAGCCACGGCATGAC +
Preference number: 4 (lower is better)
Translates to: AHRHLSCGRPRLRIRTATPHTAC*LKPRHD
Trigger: GTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGG...CGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp TCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTCCAAAGGTGCCTTATCTCGGTGGATGCTaGTCCCTCCAAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: SEGSSPPEGSPGWAPKVPYLGGC*SLQTQR
Trigger: TCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATA...AGGCACCTTTGGAGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp AGCAGAGATAAGTCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTGACAGGACATGCGTTTaGCTGTCATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SRDKSEGSSPPEGSPGWADRTCV*LSCPQS
Trigger: GGATTGGGGACATGACAGCCAAACGCATGTCCTGTC...AGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGACTTATCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp GATGGCATAGTCCACAGGCCAGGAGCCAGTAATTCTCCAGCAAGACTGTCCCTGCAATCGCTGAAGCACTaGACTCCTTCCGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DGIVHRPGASNSPARLSLQSLKH*TPSGGL
Trigger: CAAGCCCCCGGAAGGAGTTCAGTGCTTCAGCGATTG...CAGGGACAGTCTTGCTGGAGAATTACTGGCTCCTGGCCTGTGGACTATGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CCACTCTGGATGCTCCGTCCTGATGCAGTAATGGGAAGCCACCAACGATGGAACCCTGAAGCCACGGCATaGCAGGACATGCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLWMLRPDAVMGSHQRWNPEATA*QDMRLA
Trigger: AGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGG...GTTCCATCGTTGGTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp GATGGCATAGTCCACAGGCCAGGAGCCAGTAATTCTCCAGCAAGACTGTCCCTGCCTGAAGCCACGGCATaGCAGGACATGCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DGIVHRPGASNSPARLSLPEATA*QDMRLA
Trigger: AGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGG...CAGGGACAGTCTTGCTGGAGAATTACTGGCTCCTGGCCTGTGGACTATGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp GAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGTCATGGAGCCCGTGCTaGTCCTCGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: EWLLVYMGLHPSTAHRRQSWSPC*SSTCGS
Trigger: AGACCCGCAAGTCGAGGAGCAGCACGGGCTCCATGA...CTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp TCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTTCCGTGAACATGCAGTaGTTGCGCAGAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SASRLCTNVVGCWCQPVPSVNMQ*LRRVLR
Trigger: CCTCAACACTCTGCGCAAGCACTGCATGTTCACGGA...AGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACAGCTCGGCTGAGCCATaGCCAAAGCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDSSAEP*PKRAIS
Trigger: GCTGATTGCCCGCTTTGGCCATGGCTCAGCCGAGCT...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp GATGAAGCCTTGTGGGTACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTATCTCGGTGGATGCTaGTCCCTCCAAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: DEALWVPSEAGLPWGFCPYLGGC*SLQTQR
Trigger: TCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATA...GGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTACCCACAAGGCTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATAGCCTTGTGGAAGACTaGGATGTTCATGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDSLVED*DVHGAR
Trigger: ACGGGCTCCATGAACATCTCAGTCTTCCACAAGGCT...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGTGCACTCGTCCGCCATaGGGAGGGCCTCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: NKSNTHAQASTMARSSVLCTRPP*GGPLQI
Trigger: TATCTGGAGAGGCCCTCCTCATGGCGGACGAGTGCA...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATCTTGCAACCAATCGCTaGAGCACTGAACTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDLATNR*STELLP
Trigger: CGGAAGGAGTTCAGTGCTTCAGCGATTGGTTGCAAG...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp CCTGATGTCCAGGAGACTATGGAGAAACATTCCCACCTCCCACAGGCAGCCCTATCCAACACCTCGGGGTaGAGGTTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PDVQETMEKHSHLPQAALSNTSG*RLSWKL
Trigger: CAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGA...TAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATCGCACCGTCTCAAAATaGACCAGGGACATTCGGCAT +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDRTVSK*TRDIRH
Trigger: ATGCCGAATGTCCCTGGTGCATTTTGAGACGGTGCG...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp AATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCGCACCGTCTCAAAATaGACCAGGGACATTCGGCAT +
Preference number: 4 (lower is better)
Translates to: NQPQGSAQMSLVAGASPCRTVSK*TRDIRH
Trigger: ATGCCGAATGTCCCTGGTGCATTTTGAGACGGTGCG...GCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATTTGAAGTCCTCGCTCTaGCGCACCGTCTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDLKSSL*RTVSKC
Trigger: GCATTTTGAGACGGTGCGGCAGAGCGAGGACTTCAA...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp AGCAGAGATAAGTCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTCAGTCACATAGACCTTaGAACCAATCGCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SRDKSEGSSPPEGSPGWAQSHRP*NQSLKH
Trigger: GTGCTTCAGCGATTGGTTGCAAGGTCTATGTGACTG...AGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGACTTATCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp GGAGAAACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTGCTCATTCTCAGAGCCCCTaGCTCCAGTCACATAGACCT +
Preference number: 4 (lower is better)
Translates to: GETFPPPTGSPTVKGCAAHSQSP*LQSHRP
Trigger: AGGTCTATGTGACTGGAGGCAGGGGCTCTGAGAATG...AGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGCTTGGCACTCACCACTaGAGCATTGCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQLGTHH*SIADTV
Trigger: GACGGTGTCAGCAATGCTGCAGTGGTGAGTGCCAAG...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp TGCCAGCTGGTGCCAAGGAGGATAGCAGGCATGATGGGAGCCTTGGTCCTAGATGGGTGCAGGTTGTCCTaGAAGTTGACCGTATCATCC +
Preference number: 4 (lower is better)
Translates to: CQLVPRRIAGMMGALVLDGCRLS*KLTVSS
Trigger: GGATGATACGGTCAACTTCCAGGACAACCTGCACCC...ATCTAGGACCAAGGCTCCCATCATGCCTGCTATCCTCCTTGGCACCAGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGCTCCTTCCGGGGGCTTaGCAGATCTGCCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NKSNTHAQASTMARSSVLLLPGA*QICLGD
Trigger: ATCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAG...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp AATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACTCCTTCCGGGGGCTTaGCAGATCTGCCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NGCWFTWAFIPPLHTEDRLLPGA*QICLGD
Trigger: ATCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAG...TCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATACTCCTTCCGGGGGCTTaGCAGATCTGCCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPILLPGA*QICLGD
Trigger: ATCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAG...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATACCCATGATGAAGATCTaGCTGCCCAGGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPIPMMKI*LPRTAA
Trigger: CGCCGCTGTCCTGGGCAGCCAGATCTTCATCATGGG...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp AATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCGACAGGACATGCGTTTaGCTGTCATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: NQPQGSAQMSLVAGASPCDRTCV*LSCPQS
Trigger: GGATTGGGGACATGACAGCCAAACGCATGTCCTGTC...GCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCAGTTACCCGCAGGCCGTGGCTaGACATGGCCTCAAAGTATC +
Preference number: 4 (lower is better)
Translates to: LRPGCPGGSVPYKICLQLPAGRG*TWPQSI
Trigger: GATACTTTGAGGCCATGTTCAGCCACGGCCTGCGGG...TAACTGAAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CCTGATGTCCAGGAGACTATGGAGAAACATTCCCACCTCCCACAGGCAGCCCTAGGTTGTCCTGGAAGTTaGCCGTATCATCCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PDVQETMEKHSHLPQAALGCPGS*PYHPGF
Trigger: AAAGCCGGGATGATACGGTCAACTTCCAGGACAACC...TAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGGGTTGTCCTGGAAGTTaGCCGTATCATCCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQGCPGS*PYHPGF
Trigger: AAAGCCGGGATGATACGGTCAACTTCCAGGACAACC...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACAATCGCTGAAGCACTaGACTCCTTCCGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NGCWFTWAFIPPLHTEDRQSLKH*TPSGGL
Trigger: CAAGCCCCCGGAAGGAGTTCAGTGCTTCAGCGATTG...TCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATACCTGAAGCCACGGCATaGCAGGACATGCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPIPEATA*QDMRLA
Trigger: AGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGG...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp CCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCTGAAGCCACGGCATaGCAGGACATGCGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSSLHCTQKTDTTSPTDKPEATA*QDMRLA
Trigger: AGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGG...TTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp GATGGCATAGTCCACAGGCCAGGAGCCAGTAATTCTCCAGCAAGACTGTCCCTGATACAGCTTGTTGCCTaGAGCCACGGCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: DGIVHRPGASNSPARLSLIQLVA*SHGMTG
Trigger: TCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTAT...CAGGGACAGTCTTGCTGGAGAATTACTGGCTCCTGGCCTGTGGACTATGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp CCACTCTGGATGCTCCGTCCTGATGCAGTAATGGGAAGCCACCAACGATGGAACATACAGCTTGTTGCCTaGAGCCACGGCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: PLWMLRPDAVMGSHQRWNIQLVA*SHGMTG
Trigger: TCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTAT...GTTCCATCGTTGGTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp AGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACACAGACAGCACCATCATaGCAAGGCAGTTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RMAAGLHGPSSLHCTQKTQTAPS*QGSWRG
Trigger: CCCCCTCCAACTGCCTTGGCATGATGGTGCTGTCTG...TGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp CCTGATGTCCAGGAGACTATGGAGAAACATTCCCACCTCCCACAGGCAGCCCTATTGAAGTCCTCGCTCTaGCGCACCGTCTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: PDVQETMEKHSHLPQAALLKSSL*RTVSKC
Trigger: GCATTTTGAGACGGTGCGGCAGAGCGAGGACTTCAA...TAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATAACTGGTAAGGTGTGTGACCTGCCTTaGGAGGCCGGGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: CTQKTDTTSPTDKPITGKVCDLP*EAGQRD
Trigger: GTCCCTTTGCCCGGCCTCGCAAGGCAGGTCACACAC...CTTACCAGTTATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACCTTGGCACTCACCACTaGAGCATTGCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDLGTHH*SIADTV
Trigger: GACGGTGTCAGCAATGCTGCAGTGGTGAGTGCCAAG...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGCCACATACAGCTTGTTaGCTGAAGCCACGGCATGAC +
Preference number: 4 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQPHTAC*LKPRHD
Trigger: GTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGG...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp CTAGTGCTTGACAGAGGGCACACAGGCCATCTCCCCTTGACCTTAGGGGTCTGGTATCTCGGTGGATGCTaGTCCCTCCAAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLDRGHTGHLPLTLGVWYLGGC*SLQTQR
Trigger: TCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATA...CCAGACCCCTAAGGTCAAGGGGAGATGGCCTGTGTGCCCTCTGTCAAGCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp TACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACCAATCCGCGTCCACTaGTTGGTCTCACAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: YMGLHPSTAHRRQTLPLPPIRVH*LVSQSK
Trigger: CTTCGACTGTGAGACCAACCAGTGGACGCGGATTGG...TGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
3UTR CAA 72 bp CTAGTGCTTGACAGAGGGCACACAGGCCATCTCCCCTaGACCTTAGGGGTCTGGTACCATCTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LVLDRGHTGHLP*TLGVWYHLLMK
Trigger: CTTCATCAACAGATGGTACCAGACCCCTAAGGTCAAGGGGAGATGGCCTGTGTGCCCTCTGTCAAGCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACAGCCTTGTGGAAGACTaGGATGTTCATGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDSLVED*DVHGAR
Trigger: ACGGGCTCCATGAACATCTCAGTCTTCCACAAGGCT...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp GAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGGGTTGTCCTGGAAGTTaGCCGTATCATCCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: EWLLVYMGLHPSTAHRRQGCPGS*PYHPGF
Trigger: AAAGCCGGGATGATACGGTCAACTTCCAGGACAACC...CTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp TGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATAACTGGTAAGAGGAGCAGGGGCAGGTaGGCCTTCCTCTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: CTQKTDTTSPTDKPITGKRSRGR*AFLCSK
Trigger: CTTAGAGCAGAGGAAGGCTCACCTGCCCCTGCTCCT...CTTACCAGTTATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp GCCCCGTCTGAGGATCAGAACAGCCACGTCACTTCATTAGACCTCACTTCGTCACTTGCAACCAATCGCTaGAGCACTGAACTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: APSEDQNSHVTSLDLTSSLATNR*STELLP
Trigger: CGGAAGGAGTTCAGTGCTTCAGCGATTGGTTGCAAG...TGACGAAGTGAGGTCTAATGAAGTGACGTGGCTGTTCTGATCCTCAGACGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGGCAGTTCCATGTGTCTaGAGTAGGGTCATAGCAGTC +
Preference number: 4 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQAVPCV*SRVIAV
Trigger: GACTGCTATGACCCTACTTCAGACACATGGAACTGC...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp AGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACATCCAACACCTCGGGGTaGAGGTTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RMAAGLHGPSSLHCTQKTSNTSG*RLSWKL
Trigger: CAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGA...TGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp CAGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACTTGAAGTCCTCGCTCTaGCGCACCGTCTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: QNGCWFTWAFIPPLHTEDLKSSL*RTVSKC
Trigger: GCATTTTGAGACGGTGCGGCAGAGCGAGGACTTCAA...GTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp CAGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACCATTCTCAGAGCCCCTaGCTCCAGTCACATAGACCT +
Preference number: 4 (lower is better)
Translates to: QNGCWFTWAFIPPLHTEDHSQSP*LQSHRP
Trigger: AGGTCTATGTGACTGGAGGCAGGGGCTCTGAGAATG...GTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp AATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGAAGACTGAGATGTTCATaGAGCCCGTGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: NGCWFTWAFIPPLHTEDRRLRCS*SPCCSS
Trigger: CGAGGAGCAGCACGGGCTCCATGAACATCTCAGTCT...TCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGCATTCAGCAAGATCTTaGTCTTGCAGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQHSARS*SCSGRP
Trigger: AGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATG...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp GATCAGAACCCACTCTGGATGCTCCGTCCTGATGCAGTAATGGGAAGCCACCAAGACAGGACATGCGTTTaGCTGTCATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: DQNPLWMLRPDAVMGSHQDRTCV*LSCPQS
Trigger: GGATTGGGGACATGACAGCCAAACGCATGTCCTGTC...TTGGTGGCTTCCCATTACTGCATCAGGACGGAGCATCCAGAGTGGGTTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATATCCGTGAACATGCAGTaGTTGCGCAGAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPISVNMQ*LRRVLR
Trigger: CCTCAACACTCTGCGCAAGCACTGCATGTTCACGGA...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATTCCAACACCTCGGGGTaGAGGTTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHSNTSG*RLSWKL
Trigger: CAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGA...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATACCACATACAGCTTGTTaGCTGAAGCCACGGCATGAC +
Preference number: 4 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPIPHTAC*LKPRHD
Trigger: GTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGG...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACTCACACATGAAGGTCTaGCCTCCCAAGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDSHMKV*PPKMSS
Trigger: ACTGCTCATCTTGGGAGGCCAGACCTTCATGTGTGA...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp TACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCCAATCCGCGTCCACTaGTTGGTCTCACAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: YHLRPGCPGGSVPYKICLPIRVH*LVSQSK
Trigger: CTTCGACTGTGAGACCAACCAGTGGACGCGGATTGG...AAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATAGACAGGACATGCGTTTaGCTGTCATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPIDRTCV*LSCPQS
Trigger: GGATTGGGGACATGACAGCCAAACGCATGTCCTGTC...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp AGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGCAGTTCCATGTGTCTaGAGTAGGGTCATAGCAGTC +
Preference number: 4 (lower is better)
Translates to: RMAAGLHGPSSLHCTQKTAVPCV*SRVIAV
Trigger: GACTGCTATGACCCTACTTCAGACACATGGAACTGC...TGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp TACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCGGACATCATGGAACTaGAGCATGTCACCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: YHLRPGCPGGSVPYKICLRTSWN*SMSPAS
Trigger: AGAGGCTGGTGACATGCTGCAGTTCCATGATGTCCG...AAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp GGGAGCCTTGGTCCTAGATCCACAATGACAGCAATACAACCTCTGTGCAAACTGCGGACATCATGGAACTaGAGCATGTCACCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSLGPRSTMTAIQPLCKLRTSWN*SMSPAS
Trigger: AGAGGCTGGTGACATGCTGCAGTTCCATGATGTCCG...CAGTTTGCACAGAGGTTGTATTGCTGTCATTGTGGATCTAGGACCAAGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp GCCCCGTCTGAGGATCAGAACAGCCACGTCACTTCATTAGACCTCACTTCGTCACAGTCACATAGACCTTaGAACCAATCGCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: APSEDQNSHVTSLDLTSSQSHRP*NQSLKH
Trigger: GTGCTTCAGCGATTGGTTGCAAGGTCTATGTGACTG...TGACGAAGTGAGGTCTAATGAAGTGACGTGGCTGTTCTGATCCTCAGACGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATCATTCTCAGAGCCCCTaGCTCCAGTCACATAGACCT +
Preference number: 4 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHHSQSP*LQSHRP
Trigger: AGGTCTATGTGACTGGAGGCAGGGGCTCTGAGAATG...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp ATGCTCATCAGACCCTCCCTGGGAGATGTGATAATCATTGCCAAGAGCAGAGATCTTGGCACTCACCACTaGAGCATTGCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: MLIRPSLGDVIIIAKSRDLGTHH*SIADTV
Trigger: GACGGTGTCAGCAATGCTGCAGTGGTGAGTGCCAAG...ATCTCTGCTCTTGGCAATGATTATCACATCTCCCAGGGAGGGTCTGATGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp CAGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACGGGTGTGAAGCCTTGTaGAAGACTGAGATGTTCATG +
Preference number: 4 (lower is better)
Translates to: QNGCWFTWAFIPPLHTEDGCEAL*KTEMFM
Trigger: CATGAACATCTCAGTCTTCCACAAGGCTTCACACCC...GTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp CCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACATTCAGCAAGATCTTaGTCTTGCAGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PSSLHCTQKTDTTSPTDKHSARS*SCSGRP
Trigger: AGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATG...TTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp CAGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACCAAAGAGTTTCAGCTTaGCACTCACCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QNGCWFTWAFIPPLHTEDQRVSA*HSPLQH
Trigger: ATGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTG...GTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp ATGACTTTATTTACTCACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGGCAGTTCCATGTGTCTaGAGTAGGGTCATAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MTLFTHSTDNSSGAHRHLAVPCV*SRVIAV
Trigger: GACTGCTATGACCCTACTTCAGACACATGGAACTGC...CAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTGAGTAAATAAAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp ATGCTCATCAGACCCTCCCTGGGAGATGTGATAATCATTGCCAAGAGCAGAGATCGCACCGTCTCAAAATaGACCAGGGACATTCGGCAT +
Preference number: 4 (lower is better)
Translates to: MLIRPSLGDVIIIAKSRDRTVSK*TRDIRH
Trigger: ATGCCGAATGTCCCTGGTGCATTTTGAGACGGTGCG...ATCTCTGCTCTTGGCAATGATTATCACATCTCCCAGGGAGGGTCTGATGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR GCA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGCAGTCACATAGACCTTaGAACCAATCGCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: NKSNTHAQASTMARSSVLQSHRP*NQSLKH
Trigger: GTGCTTCAGCGATTGGTTGCAAGGTCTATGTGACTG...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATTCACACATGAAGGTCTaGCCTCCCAAGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHSHMKV*PPKMSS
Trigger: ACTGCTCATCTTGGGAGGCCAGACCTTCATGTGTGA...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp GGGAGCCTTGGTCCTAGATCCACAATGACAGCAATACAACCTCTGTGCAAACTGTCACACATGAAGGTCTaGCCTCCCAAGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSLGPRSTMTAIQPLCKLSHMKV*PPKMSS
Trigger: ACTGCTCATCTTGGGAGGCCAGACCTTCATGTGTGA...CAGTTTGCACAGAGGTTGTATTGCTGTCATTGTGGATCTAGGACCAAGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp AATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGATATCTCGGTGGATGCTaGTCCCTCCAAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: NGCWFTWAFIPPLHTEDRYLGGC*SLQTQR
Trigger: TCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATA...TCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACGAGGGGTCAAAACACTaGACTTTGGACACCATATCT +
Preference number: 4 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDEGSKH*TLDTIS
Trigger: AGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTC...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CCA 90 bp ACTACTGGCAGGTATATCATGCTGCTCTTCTGTGCCTCTAAGGAGGGCAAGCATGGGTGTGAAGCCTTGTaGAAGACTGAGATGTTCATG +
Preference number: 4 (lower is better)
Translates to: TTGRYIMLLFCASKEGKHGCEAL*KTEMFM
Trigger: CATGAACATCTCAGTCTTCCACAAGGCTTCACACCC...ATGCTTGCCCTCCTTAGAGGCACAGAAGAGCAGCATGATATACCTGCCAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGGAGGGGTCAAAACACTaGACTTTGGACACCATATCT +
Preference number: 4 (lower is better)
Translates to: NKSNTHAQASTMARSSVLEGSKH*TLDTIS
Trigger: AGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTC...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCGTGTGTGACCTGCCTTaGGAGGCCGGGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TFIKLETNKSNTHAQASTVCDLP*EAGQRD
Trigger: GTCCCTTTGCCCGGCCTCGCAAGGCAGGTCACACAC...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp ATGCTCATCAGACCCTCCCTGGGAGATGTGATAATCATTGCCAAGAGCAGAGATCAAAGAGTTTCAGCTTaGCACTCACCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MLIRPSLGDVIIIAKSRDQRVSA*HSPLQH
Trigger: ATGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTG...ATCTCTGCTCTTGGCAATGATTATCACATCTCCCAGGGAGGGTCTGATGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCAGGAGCAGGGGCAGGTaGGCCTTCCTCTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TFIKLETNKSNTHAQASTRSRGR*AFLCSK
Trigger: CTTAGAGCAGAGGAAGGCTCACCTGCCCCTGCTCCT...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR GCA 90 bp AGTTTCTTCGGATCCTTCTTTCTGAGCTCAAGGAAGAAAATCAGACAGGATTCACTTGGCACTCACCACTaGAGCATTGCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: SFFGSFFLSSRKKIRQDSLGTHH*SIADTV
Trigger: GACGGTGTCAGCAATGCTGCAGTGGTGAGTGCCAAG...TGAATCCTGTCTGATTTTCTTCCTTGAGCTCAGAAAGAAGGATCCGAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp TGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATAACTGGTAAGGAGGGGTCAAAACACTaGACTTTGGACACCATATCT +
Preference number: 4 (lower is better)
Translates to: CTQKTDTTSPTDKPITGKEGSKH*TLDTIS
Trigger: AGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTC...CTTACCAGTTATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR TCA 90 bp AGTTTCTTCGGATCCTTCTTTCTGAGCTCAAGGAAGAAAATCAGACAGGATTCAAGCCTTGTGGAAGACTaGGATGTTCATGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: SFFGSFFLSSRKKIRQDSSLVED*DVHGAR
Trigger: ACGGGCTCCATGAACATCTCAGTCTTCCACAAGGCT...TGAATCCTGTCTGATTTTCTTCCTTGAGCTCAGAAAGAAGGATCCGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp AGTTTCTTCGGATCCTTCTTTCTGAGCTCAAGGAAGAAAATCAGACAGGATTCAGGGTGCAGGTTGTCCTaGAAGTTGACCGTATCATCC +
Preference number: 4 (lower is better)
Translates to: SFFGSFFLSSRKKIRQDSGCRLS*KLTVSS
Trigger: GGATGATACGGTCAACTTCCAGGACAACCTGCACCC...TGAATCCTGTCTGATTTTCTTCCTTGAGCTCAGAAAGAAGGATCCGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR TCA 90 bp AGTTTCTTCGGATCCTTCTTTCTGAGCTCAAGGAAGAAAATCAGACAGGATTCAGCAGTTCCATGTGTCTaGAGTAGGGTCATAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SFFGSFFLSSRKKIRQDSAVPCV*SRVIAV
Trigger: GACTGCTATGACCCTACTTCAGACACATGGAACTGC...TGAATCCTGTCTGATTTTCTTCCTTGAGCTCAGAAAGAAGGATCCGAAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCAGACTGAGATGTTCATaGAGCCCGTGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TFIKLETNKSNTHAQASTRLRCS*SPCCSS
Trigger: CGAGGAGCAGCACGGGCTCCATGAACATCTCAGTCT...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CCA 90 bp ACTTTTATTAAGTTAGAAACTAATAAAAGCAACACCCATGCTCAGGCAAGCACCGAGGGGTCAAAACACTaGACTTTGGACACCATATCT +
Preference number: 4 (lower is better)
Translates to: TFIKLETNKSNTHAQASTEGSKH*TLDTIS
Trigger: AGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTC...GGTGCTTGCCTGAGCATGGGTGTTGCTTTTATTAGTTTCTAACTTAATAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp CGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGAGCCGACTCCTTCCGGGGGCTaGGCAGATCTGCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RWLLVPARASGRFSPHEPTPSGG*ADLPWG
Trigger: TCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAGT...CGGCTCGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp CTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCATCCGCGTCCACTGGTaGGTCTCACAGTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: LELSASGPGRRNHAVWLGIRVHW*VSQSKR
Trigger: CCGCTTCGACTGTGAGACCAACCAGTGGACGCGGAT...GCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTCCAAAGGTGCCTTGCTTGCGCAGAGTGTaGAGGTGGGCCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: SEGSSPPEGSPGWAPKVPCLRRV*RWASTQ
Trigger: CTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCA...AGGCACCTTTGGAGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCACCTCGGGGTGCAGGTaGTCCTGGAAGTTGACCGTA +
Preference number: 5 (lower is better)
Translates to: LELSASGPGRRNHAVWLGTSGCR*SWKLTV
Trigger: TACGGTCAACTTCCAGGACAACCTGCACCCCGAGGT...GCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp CTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCCCACCACATACAGCTaGTTGCCTGAAGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: LGLELSASGPGRRNHAVWPTTYS*LPEATA
Trigger: TGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGG...CCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS TCA 90 bp GAGGGCAGCAGGGCCAGTCGCACGTTACGCAGGAGCAGGGGCAGGTaGGCCTTCCTCTGCTCTAAGTCATGCTTCACCCACTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: EGSRASRTLRRSRGR*AFLCSKSCFTHCRM
Trigger: CATCCTGCAGTGGGTGAAGCATGACTTAGAGCAGAGGAAGGCTCACCTGCCCCTGCTCCTGCGTAACGTGCGACTGGCCCTGCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CCA 90 bp AAGATCTGGCTGCCCAGGACAGCGGCGGCTGTGTATCGCCAGGGCTaGGGACACTCTGCTTTGATTGTCCACCGGTTCTCCGAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: KIWLPRTAAAVYRQG*GHSALIVHRFSEGS
Trigger: TGACCCCTCGGAGAACCGGTGGACAATCAAAGCAGAGTGTCCCCAGCCCTGGCGATACACAGCCGCCGCTGTCCTGGGCAGCCAGATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp AGCAGAGATAAGTCAGAGGGTTCCAGCCCTCCTGAGGGCTCACCTGGCTGGGCTACTCCTTCCGGGGGCTaGGCAGATCTGCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SRDKSEGSSPPEGSPGWATPSGG*ADLPWG
Trigger: TCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAGT...AGCCCAGCCAGGTGAGCCCTCAGGAGGGCTGGAACCCTCTGACTTATCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CCTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGTCCGCGTTCTCCTCATaGATGACGATGCGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PGAGAVSFWPRQEEPRSLSAFSS*MTMREE
Trigger: CTCTTCTCGCATCGTCATCAATGAGGAGAACGCGGA...CAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp GATGAAGCCTTGTGGGTACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTCCCTAGAGAGACTGTaGAAGTCCTCGCTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: DEALWVPSEAGLPWGFCPSLERL*KSSLCR
Trigger: GCGGCAGAGCGAGGACTTCAACAGTCTCTCTAGGGA...GGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTACCCACAAGGCTTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp CCTGGGGCTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGTCATTCAGCAAGATCTaGGTCTTGCAGCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: PGAGAVSFWPRQEEPRSLSFSKI*VLQRKA
Trigger: GGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGA...CAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCTCTCACCACTGCAGCATaGCTGACACCGTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: WSCQLLAQAGGTTQSGWALTTAA*LTPSLM
Trigger: CATGAGAGACGGTGTCAGCAATGCTGCAGTGGTGAG...AGCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS TCA 90 bp CTCGCTCTGCCGCACCGTCTCAAAATGCACCAGGGACATTCGGCATaGGAACTCGTAGAGCCGTCGGCACTGGTGGGCATCAGACAGCAC +
Preference number: 5 (lower is better)
Translates to: LALPHRLKMHQGHSA*ELVEPSALVGIRQH
Trigger: GTGCTGTCTGATGCCCACCAGTGCCGACGGCTCTACGAGTTCTCATGCCGAATGTCCCTGGTGCATTTTGAGACGGTGCGGCAGAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CTCACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCTCCCTAGAGAGACTGTaGAAGTCCTCGCTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LTALTTAAGLTDTCPVVGSLERL*KSSLCR
Trigger: GCGGCAGAGCGAGGACTTCAACAGTCTCTCTAGGGA...GCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CTGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCTTGGGGATAATCTCCTaGGCTTTGTGGTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: LELSASGPGRRNHAVWLGLGIIS*ALWSTW
Trigger: CCAAGTGGACCACAAAGCCAAGGAGATTATCCCCAA...GCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTATCCGCGTCCACTGGTaGGTCTCACAGTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SASRLCTNVVGCWCQPVPIRVHW*VSQSKR
Trigger: CCGCTTCGACTGTGAGACCAACCAGTGGACGCGGAT...AGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS GCA 90 bp AAGGCTCGGTCACCAGCCCAGAGTGTGACATCCGTGAACATGCAGTaGTTGCGCAGAGTGTTGAGGTGGGCCAGCACACAGTCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: KARSPAQSVTSVNMQ*LRRVLRWASTQSGC
Trigger: ACACCCTGACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGATGTCACACTCTGGGCTGGTGACCGAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp GGAGAAACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTGCTTGCTTGCGCAGAGTGTaGAGGTGGGCCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: GETFPPPTGSPTVKGCAACLRRV*RWASTQ
Trigger: CTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCA...AGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp GATGAAGCCTTGTGGGTACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCAGGTTGTCCTGGAAGTaGACCGTATCATCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: DEALWVPSEAGLPWGFCPRLSWK*TVSSRL
Trigger: AAGCCGGGATGATACGGTCAACTTCCAGGACAACCT...GGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTACCCACAAGGCTTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTACCTCGGGGTGCAGGTaGTCCTGGAAGTTGACCGTA +
Preference number: 5 (lower is better)
Translates to: SASRLCTNVVGCWCQPVPTSGCR*SWKLTV
Trigger: TACGGTCAACTTCCAGGACAACCTGCACCCCGAGGT...AGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp GATGAAGCCTTGTGGGTACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCCTTGGCAGATCTGCCTaGGGGATAATCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: DEALWVPSEAGLPWGFCPLGRSA*GIISLA
Trigger: AGCCAAGGAGATTATCCCCAAGGCAGATCTGCCAAG...GGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTACCCACAAGGCTTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp CACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCTGTGGTAGGCCCCTTGGCAGATCTGCCTaGGGGATAATCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: HSTDNSSGAHRHLSCGRPLGRSA*GIISLA
Trigger: AGCCAAGGAGATTATCCCCAAGGCAGATCTGCCAAG...GGGCCTACCACAGGACAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp TGGAGCTGTCAGCTTCTGGCCCAGGCAGGAGGAACCACGCAGTCTGGCTGGGCTACAAAGAGTTTCAGCTaGGCACTCACCACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: WSCQLLAQAGGTTQSGWATKSFS*ALTTAA
Trigger: TGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTGT...AGCCCAGCCAGACTGCGTGGTTCCTCCTGCCTGGGCCAGAAGCTGACAGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS TCA 90 bp CCTCTGGGTCCCAAAGTAGCCTCCCACCACATACAGCTTGTTGCCTaGAGCCACGGCATGACAGGACATGCGTTTGGCTGTCATGTCCCC +
Preference number: 5 (lower is better)
Translates to: PLGPKVASHHIQLVA*SHGMTGHAFGCHVP
Trigger: GGGGACATGACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGGAGGCTACTTTGGGACCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp GGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACACCTCGGGGTGCAGGTaGTCCTGGAAGTTGACCGTA +
Preference number: 5 (lower is better)
Translates to: GPSSLHCTQKTDTTSPTDTSGCR*SWKLTV
Trigger: TACGGTCAACTTCCAGGACAACCTGCACCCCGAGGT...GTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp GAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACTCCTTCCGGGGGCTaGGCAGATCTGCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: EWLLVYMGLHPSTAHRRQTPSGG*ADLPWG
Trigger: TCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAGT...CTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS GCA 90 bp CCACCACATACAGCTTGTTGCCTGAAGCCACGGCATGACAGGACATaGGTTTGGCTGTCATGTCCCCAATCCGCGTCCACTGGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: PPHTACCLKPRHDRT*VWLSCPQSASTGWS
Trigger: AGACCAACCAGTGGACGCGGATTGGGGACATGACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 90 bp AGGACATGCGTTTGGCTGTCATGTCCCCAATCCGCGTCCACTGGTTaGTCTCACAGTCGAAGCGGTAGGCTGAAGCTGCTGTGTACTCTG +
Preference number: 5 (lower is better)
Translates to: RTCVWLSCPQSASTG*SHSRSGRLKLLCTL
Trigger: CAGAGTACACAGCAGCTTCAGCCTACCGCTTCGACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACAGCCAAACGCATGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp AATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCGTGAACATGCAGTGCTaGCGCAGAGTGTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: NQPQGSAQMSLVAGASPCVNMQC*RRVLRW
Trigger: CCACCTCAACACTCTGCGCAAGCACTGCATGTTCAC...GCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTTCCGCGTTCTCCTCATaGATGACGATGCGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SASRLCTNVVGCWCQPVPSAFSS*MTMREE
Trigger: CTCTTCTCGCATCGTCATCAATGAGGAGAACGCGGA...AGGCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp AATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGTTGGGGATAATCTCCTaGGCTTTGTGGTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: NVVGCWCQPVPLDASLHTLGIIS*ALWSTW
Trigger: CCAAGTGGACCACAAAGCCAAGGAGATTATCCCCAA...CGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp AATCAGCCTCAAGGCTCTGCACAAATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCACCACTGCAGCATaGCTGACACCGTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: NQPQGSAQMSLVAGASPCLTTAA*LTPSLM
Trigger: CATGAGAGACGGTGTCAGCAATGCTGCAGTGGTGAG...GCACGGGCTGGCACCAGCAACCAACGACATTTGTGCAGAGCCTTGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp AATGTCGTTGGTTGCTGGTGCCAGCCCGTGCCTCTGGACGCTTCTCTCCACACGACAAAGAGTTTCAGCTaGGCACTCACCACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: NVVGCWCQPVPLDASLHTTKSFS*ALTTAA
Trigger: TGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTGT...CGTGTGGAGAGAAGCGTCCAGAGGCACGGGCTGGCACCAGCAACCAACGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACATCCGCGTCCACTGGTaGGTCTCACAGTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDIRVHW*VSQSKR
Trigger: CCGCTTCGACTGTGAGACCAACCAGTGGACGCGGAT...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS GCA 90 bp AGGTCCAACAGCGTGTCCCTAGAGAGACTGTTGAAGTCCTCGCTCTaGCGCACCGTCTCAAAATGCACCAGGGACATTCGGCATGAGAAC +
Preference number: 5 (lower is better)
Translates to: RSNSVSLERLLKSSL*RTVSKCTRDIRHEN
Trigger: GTTCTCATGCCGAATGTCCCTGGTGCATTTTGAGACGGTGCGGCAGAGCGAGGACTTCAACAGTCTCTCTAGGGACACGCTGTTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CCA 90 bp AGTGTGACATCCGTGAACATGCAGTGCTTGCGCAGAGTGTTGAGGTaGGCCAGCACACAGTCAGGGTGTGAAGCCTTGTGGAAGACTGAG +
Preference number: 5 (lower is better)
Translates to: SVTSVNMQCLRRVLR*ASTQSGCEALWKTE
Trigger: CTCAGTCTTCCACAAGGCTTCACACCCTGACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGATGTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CCA 90 bp CATACAGCTTGTTGCCTGAAGCCACGGCATGACAGGACATGCGTTTaGCTGTCATGTCCCCAATCCGCGTCCACTGGTTGGTCTCACAGT +
Preference number: 5 (lower is better)
Translates to: HTACCLKPRHDRTCV*LSCPQSASTGWSHS
Trigger: ACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp GGAGAAACATTCCCACCTCCCACAGGCAGCCCTACAGTCAAAGGCTGTGCTGCTAGGTTGTCCTGGAAGTaGACCGTATCATCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: GETFPPPTGSPTVKGCAARLSWK*TVSSRL
Trigger: AAGCCGGGATGATACGGTCAACTTCCAGGACAACCT...AGCAGCACAGCCTTTGACTGTAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp GGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAGGTTGTCCTGGAAGTaGACCGTATCATCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: GPSSLHCTQKTDTTSPTDRLSWK*TVSSRL
Trigger: AAGCCGGGATGATACGGTCAACTTCCAGGACAACCT...GTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp GCTCACAGACACCTGTCCTGTGGTAGGCCCCGTCTGAGGATCAGAACAGCCACGGGCTTTGTGGTCCACTaGGTAGATCTTGTCACACAT +
Preference number: 5 (lower is better)
Translates to: AHRHLSCGRPRLRIRTATGFVVH*VDLVTH
Trigger: ATGTGTGACAAGATCTACCAAGTGGACCACAAAGCC...CGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCAGTTAACTCCTTCCGGGGGCTaGGCAGATCTGCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LRPGCPGGSVPYKICLQLTPSGG*ADLPWG
Trigger: TCCCCAAGGCAGATCTGCCAAGCCCCCGGAAGGAGT...TAACTGAAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp GGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACTCAGGGTGTGAAGCCTaGTGGAAGACTGAGATGTTC +
Preference number: 5 (lower is better)
Translates to: GPSSLHCTQKTDTTSPTDSGCEA*WKTEMF
Trigger: GAACATCTCAGTCTTCCACAAGGCTTCACACCCTGA...GTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp AATTCTCCAGCAAGACTGTCCCTGAGGTGGAATGGGAAGCCAGCTGGACCTCAGTCATTCAGCAAGATCTaGGTCTTGCAGCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: NSPARLSLRWNGKPAGPQSFSKI*VLQRKA
Trigger: GGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGA...CTGAGGTCCAGCTGGCTTCCCATTCCACCTCAGGGACAGTCTTGCTGGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp GGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACTTGGGGATAATCTCCTaGGCTTTGTGGTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: GPSSLHCTQKTDTTSPTDLGIIS*ALWSTW
Trigger: CCAAGTGGACCACAAAGCCAAGGAGATTATCCCCAA...GTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp AGACACCTGTCCTGTGGTAGGCCCCGTCTGAGGATCAGAACAGCCACGTCACTTTTGGGGATAATCTCCTaGGCTTTGTGGTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: RHLSCGRPRLRIRTATSLLGIIS*ALWSTW
Trigger: CCAAGTGGACCACAAAGCCAAGGAGATTATCCCCAA...AAGTGACGTGGCTGTTCTGATCCTCAGACGGGGCCTACCACAGGACAGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACCTCACCACTGCAGCATaGCTGACACCGTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDLTTAA*LTPSLM
Trigger: CATGAGAGACGGTGTCAGCAATGCTGCAGTGGTGAG...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp ATGACTTTATTTACTCACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGATCCGCGTCCACTGGTaGGTCTCACAGTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: MTLFTHSTDNSSGAHRHLIRVHW*VSQSKR
Trigger: CCGCTTCGACTGTGAGACCAACCAGTGGACGCGGAT...CAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTGAGTAAATAAAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp TCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATACCCACCACATACAGCTaGTTGCCTGAAGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: SLHCTQKTDTTSPTDKPIPTTYS*LPEATA
Trigger: TGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGG...TATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp AGAATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACACCCACCACATACAGCTaGTTGCCTGAAGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: RMAAGLHGPSSLHCTQKTPTTYS*LPEATA
Trigger: TGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGG...TGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 90 bp CACTCTGCTTTGATTGTCCACCGGTTCTCCGAGGGGTCAAAACACTaGACTTTGGACACCATATCTCGGTGGATGCTGGTCCCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: HSALIVHRFSEGSKH*TLDTISRWMLVPPN
Trigger: GTTTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTCGGAGAACCGGTGGACAATCAAAGCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CCTGATGTCCAGGAGACTATGGAGAAACATTCCCACCTCCCACAGGCAGCCCTATCAGGGTGTGAAGCCTaGTGGAAGACTGAGATGTTC +
Preference number: 5 (lower is better)
Translates to: PDVQETMEKHSHLPQAALSGCEA*WKTEMF
Trigger: GAACATCTCAGTCTTCCACAAGGCTTCACACCCTGA...TAGGGCTGCCTGTGGGAGGTGGGAATGTTTCTCCATAGTCTCCTGGACATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTTCCCTAGAGAGACTGTaGAAGTCCTCGCTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: YHLRPGCPGGSVPYKICLSLERL*KSSLCR
Trigger: GCGGCAGAGCGAGGACTTCAACAGTCTCTCTAGGGA...AAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTTGGCAGATCTGCCTaGGGGATAATCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: YMGLHPSTAHRRQTLPLPLGRSA*GIISLA
Trigger: AGCCAAGGAGATTATCCCCAAGGCAGATCTGCCAAG...TGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp TACCATCTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCCCACCACATACAGCTaGTTGCCTGAAGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: YHLRPGCPGGSVPYKICLPTTYS*LPEATA
Trigger: TGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGG...AAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAGATGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp ATGGCTGCTGGTTTACATGGGCCTTCATCCCTCCACTGCACACAGAAGACAGACACAAAGAGTTTCAGCTaGGCACTCACCACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: MAAGLHGPSSLHCTQKTDTKSFS*ALTTAA
Trigger: TGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTGT...GTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGGCCCATGTAAACCAGCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 90 bp TTCTCCGAGGGGTCAAAACACTGGACTTTGGACACCATATCTCGGTaGATGCTGGTCCCTCCAAACACAAAGAGTTTCAGCTTGGCACTC +
Preference number: 5 (lower is better)
Translates to: FSEGSKHWTLDTISR*MLVPPNTKSFSLAL
Trigger: GAGTGCCAAGCTGAAACTCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTCGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp ATGACTTTATTTACTCACAGCACTGACAACAGCAGCGGGGCTCACAGACACCTGTCCGCGTTCTCCTCATaGATGACGATGCGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: MTLFTHSTDNSSGAHRHLSAFSS*MTMREE
Trigger: CTCTTCTCGCATCGTCATCAATGAGGAGAACGCGGA...CAGGTGTCTGTGAGCCCCGCTGCTGTTGTCAGTGCTGTGAGTAAATAAAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp GGGAGCCTTGGTCCTAGATCCACAATGACAGCAATACAACCTCTGTGCAAACTGCTTGGCAGATCTGCCTaGGGGATAATCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GSLGPRSTMTAIQPLCKLLGRSA*GIISLA
Trigger: AGCCAAGGAGATTATCCCCAAGGCAGATCTGCCAAG...CAGTTTGCACAGAGGTTGTATTGCTGTCATTGTGGATCTAGGACCAAGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp TGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATAACTGGTAAGCTCACCACTGCAGCATaGCTGACACCGTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: CTQKTDTTSPTDKPITGKLTTAA*LTPSLM
Trigger: CATGAGAGACGGTGTCAGCAATGCTGCAGTGGTGAG...CTTACCAGTTATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAAACAAAGAGTTTCAGCTaGGCACTCACCACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PSSLHCTQKTDTTSPTDKTKSFS*ALTTAA
Trigger: TGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTGT...TTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp TGCACACAGAAGACAGACACTACCTCTCCCACTGACAAACCCATAACTGGTAAGTCATTCAGCAAGATCTaGGTCTTGCAGCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: CTQKTDTTSPTDKPITGKSFSKI*VLQRKA
Trigger: GGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGA...CTTACCAGTTATGGGTTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp AATAAAAGCAACACCCATGCTCAGGCAAGCACCATGGCTAGGTCCTCTGTGCTGGGCTTTGTGGTCCACTaGGTAGATCTTGTCACACAT +
Preference number: 5 (lower is better)
Translates to: NKSNTHAQASTMARSSVLGFVVH*VDLVTH
Trigger: ATGTGTGACAAGATCTACCAAGTGGACCACAAAGCC...CAGCACAGAGGACCTAGCCATGGTGCTTGCCTGAGCATGGGTGTTGCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS-3UTR CAA 90 bp CCTTCATCCCTCCACTGCACACAGAAGACAGACACTACCTCTCCCACTGACAAAGGCTTTGTGGTCCACTaGGTAGATCTTGTCACACAT +
Preference number: 5 (lower is better)
Translates to: PSSLHCTQKTDTTSPTDKGFVVH*VDLVTH
Trigger: ATGTGTGACAAGATCTACCAAGTGGACCACAAAGCC...TTTGTCAGTGGGAGAGGTAGTGTCTGTCTTCTGTGTGCAGTGGAGGGATGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS-3UTR CAA 90 bp CTGAGGCCGGGTTGCCCTGGGGGTTCTGTCCCTTATAAAATATGTCTTCAGTTAGGCTTTGTGGTCCACTaGGTAGATCTTGTCACACAT +
Preference number: 5 (lower is better)
Translates to: LRPGCPGGSVPYKICLQLGFVVH*VDLVTH
Trigger: ATGTGTGACAAGATCTACCAAGTGGACCACAAAGCC...TAACTGAAGACATATTTTATAAGGGACAGAACCCCCAGGGCAACCCGGCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
CDS TCA 72 bp GCTCCAACACCTCGGGGTGCAGGTTGTCCTGGAAGTTaGCCGTATCATCCCGGCTTTCCCGCAGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: APTPRGAGCPGS*PYHPGFPAGRG
Trigger: GCCACGGCCTGCGGGAAAGCCGGGATGATACGGTCAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CCA 72 bp CTGCCCAGGACAGCGGCGGCTGTGTATCGCCAGGGCTaGGGACACTCTGCTTTGATTGTCCACCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LPRTAAAVYRQG*GHSALIVHRFS
Trigger: GGAGAACCGGTGGACAATCAAAGCAGAGTGTCCCCAGCCCTGGCGATACACAGCCGCCGCTGTCCTGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS GCA 72 bp GAAGGTCTGGCCTCCCAAGATGAGCAGTGTGTGACCTaGCTTGCGAGGCCGGGCAAAGGGACTGGTGACCAC +
Preference number: 6 (lower is better)
Translates to: EGLASQDEQCVT*LARPGKGTGDH
Trigger: GTGGTCACCAGTCCCTTTGCCCGGCCTCGCAAGGCAGGTCACACACTGCTCATCTTGGGAGGCCAGACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 72 bp AGCTCCAACACCTCGGGGTGCAGGTTGTCCTGGAAGTaGACCGTATCATCCCGGCTTTCCCGCAGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SSNTSGCRLSWK*TVSSRLSRRPW
Trigger: CCACGGCCTGCGGGAAAGCCGGGATGATACGGTCAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 90 bp TCCAACAGCAGCTCCAACACCTCGGGGTGCAGGTTGTCCTGGAAGTaGACCGTATCATCCCGGCTTTCCCGCAGGCCGTGGCTGAACATG +
Preference number: 6 (lower is better)
Translates to: SNSSSNTSGCRLSWK*TVSSRLSRRPWLNM
Trigger: CATGTTCAGCCACGGCCTGCGGGAAAGCCGGGATGATACGGTCAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGAGCTGCTGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS TCA 72 bp CCGCACCGTCTCAAAATGCACCAGGGACATTCGGCATaGGAACTCGTAGAGCCGTCGGCACTGGTGGGCATC +
Preference number: 6 (lower is better)
Translates to: PHRLKMHQGHSA*ELVEPSALVGI
Trigger: GATGCCCACCAGTGCCGACGGCTCTACGAGTTCTCATGCCGAATGTCCCTGGTGCATTTTGAGACGGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CCA 72 bp AACAGCAGCTCCAACACCTCGGGGTGCAGGTTGTCCTaGAAGTTGACCGTATCATCCCGGCTTTCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: NSSSNTSGCRLS*KLTVSSRLSRR
Trigger: CCTGCGGGAAAGCCGGGATGATACGGTCAACTTCCAGGACAACCTGCACCCCGAGGTGTTGGAGCTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 72 bp TTGGTCTTGCAGCGGAAGGCCTCGTCTAAGATGAGCTaGGTGCACTCGTCCGCCATGAGGAGGGCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LVLQRKASSKMS*VHSSAMRRASP
Trigger: TGGAGAGGCCCTCCTCATGGCGGACGAGTGCACCAAGCTCATCTTAGACGAGGCCTTCCGCTGCAAGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 90 bp CGCAGAGTGTTGAGGTGGGCCAGCACACAGTCAGGGTGTGAAGCCTaGTGGAAGACTGAGATGTTCATGGAGCCCGTGCTGCTCCTCGAC +
Preference number: 6 (lower is better)
Translates to: RRVLRWASTQSGCEA*WKTEMFMEPVLLLD
Trigger: GTCGAGGAGCAGCACGGGCTCCATGAACATCTCAGTCTTCCACAAGGCTTCACACCCTGACTGTGTGCTGGCCCACCTCAACACTCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CAA 90 bp GCTCGGTCACCAGCCCAGAGTGTGACATCCGTGAACATGCAGTGCTaGCGCAGAGTGTTGAGGTGGGCCAGCACACAGTCAGGGTGTGAA +
Preference number: 6 (lower is better)
Translates to: ARSPAQSVTSVNMQC*RRVLRWASTQSGCE
Trigger: TTCACACCCTGACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGATGTCACACTCTGGGCTGGTGACCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CAA 90 bp GCCCAGAGTGTGACATCCGTGAACATGCAGTGCTTGCGCAGAGTGTaGAGGTGGGCCAGCACACAGTCAGGGTGTGAAGCCTTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: AQSVTSVNMQCLRRV*RWASTQSGCEALWK
Trigger: CTTCCACAAGGCTTCACACCCTGACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGATGTCACACTCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CAA 90 bp AGCAAGATCTTGGTCTTGCAGCGGAAGGCCTCGTCTAAGATGAGCTaGGTGCACTCGTCCGCCATGAGGAGGGCCTCTCCAGATACGGCA +
Preference number: 6 (lower is better)
Translates to: SKILVLQRKASSKMS*VHSSAMRRASPDTA
Trigger: TGCCGTATCTGGAGAGGCCCTCCTCATGGCGGACGAGTGCACCAAGCTCATCTTAGACGAGGCCTTCCGCTGCAAGACCAAGATCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS GCA 72 bp TCACCAGCCCAGAGTGTGACATCCGTGAACATGCAGTaGTTGCGCAGAGTGTTGAGGTGGGCCAGCACACAG +
Preference number: 6 (lower is better)
Translates to: SPAQSVTSVNMQ*LRRVLRWASTQ
Trigger: CTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGATGTCACACTCTGGGCTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CCA 72 bp CAGGGTGTGAAGCCTTGTGGAAGACTGAGATGTTCATaGAGCCCGTGCTGCTCCTCGACTTGCGGGTCTCGT +
Preference number: 6 (lower is better)
Translates to: QGVKPCGRLRCS*SPCCSSTCGSR
Trigger: ACGAGACCCGCAAGTCGAGGAGCAGCACGGGCTCCATGAACATCTCAGTCTTCCACAAGGCTTCACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CCA 72 bp TCCGTGAACATGCAGTGCTTGCGCAGAGTGTTGAGGTaGGCCAGCACACAGTCAGGGTGTGAAGCCTTGTGG +
Preference number: 6 (lower is better)
Translates to: SVNMQCLRRVLR*ASTQSGCEALW
Trigger: CCACAAGGCTTCACACCCTGACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CCA 72 bp GTTTGGCTGTCATGTCCCCAATCCGCGTCCACTGGTTaGTCTCACAGTCGAAGCGGTAGGCTGAAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VWLSCPQSASTG*SHSRSGRLKLL
Trigger: CAGCAGCTTCAGCCTACCGCTTCGACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACAGCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 72 bp TGTTGCCTGAAGCCACGGCATGACAGGACATGCGTTTaGCTGTCATGTCCCCAATCCGCGTCCACTGGTTGG +
Preference number: 6 (lower is better)
Translates to: CCLKPRHDRTCV*LSCPQSASTGW
Trigger: CCAACCAGTGGACGCGGATTGGGGACATGACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CAA 72 bp CCAGCCCAGAGTGTGACATCCGTGAACATGCAGTGCTaGCGCAGAGTGTTGAGGTGGGCCAGCACACAGTCA +
Preference number: 6 (lower is better)
Translates to: PAQSVTSVNMQC*RRVLRWASTQS
Trigger: TGACTGTGTGCTGGCCCACCTCAACACTCTGCGCAAGCACTGCATGTTCACGGATGTCACACTCTGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205887.2
ENSMUST00000206019.2
CDS CAA 90 bp GGCCGGGCAAAGGGACTGGTGACCACACCATCATTCAGCAAGATCTaGGTCTTGCAGCGGAAGGCCTCGTCTAAGATGAGCTTGGTGCAC +
Preference number: 6 (lower is better)
Translates to: GRAKGLVTTPSFSKI*VLQRKASSKMSLVH
Trigger: GTGCACCAAGCTCATCTTAGACGAGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGATGGTGTGGTCACCAGTCCCTTTGCCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS GCA 72 bp AGGAACTCAGCAGCTGCATCCCGGACATCATGGAACTaGAGCATGTCACCAGCCTCTAGTAGTGACTCCGCG +
Preference number: 6 (lower is better)
Translates to: RNSAAASRTSWN*SMSPASSSDSA
Trigger: CGCGGAGTCACTACTAGAGGCTGGTGACATGCTGCAGTTCCATGATGTCCGGGATGCAGCTGCTGAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS GCA 72 bp AGCGTGTCCCTAGAGAGACTGTTGAAGTCCTCGCTCTaGCGCACCGTCTCAAAATGCACCAGGGACATTCGG +
Preference number: 6 (lower is better)
Translates to: SVSLERLLKSSL*RTVSKCTRDIR
Trigger: CCGAATGTCCCTGGTGCATTTTGAGACGGTGCGGCAGAGCGAGGACTTCAACAGTCTCTCTAGGGACACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS GCA 72 bp ACAGCTTGTTGCCTGAAGCCACGGCATGACAGGACATaGGTTTGGCTGTCATGTCCCCAATCCGCGTCCACT +
Preference number: 6 (lower is better)
Translates to: TACCLKPRHDRT*VWLSCPQSAST
Trigger: AGTGGACGCGGATTGGGGACATGACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CAA 72 bp GTCCACCGGTTCTCCGAGGGGTCAAAACACTGGACTTaGGACACCATATCTCGGTGGATGCTGGTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: VHRFSEGSKHWT*DTISRWMLVPP
Trigger: TGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTCGGAGAACCGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CAA 90 bp TCATCTCTGGAGATGAGGTCCAACAGCGTGTCCCTAGAGAGACTGTaGAAGTCCTCGCTCTGCCGCACCGTCTCAAAATGCACCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SSLEMRSNSVSLERL*KSSLCRTVSKCTRD
Trigger: GTCCCTGGTGCATTTTGAGACGGTGCGGCAGAGCGAGGACTTCAACAGTCTCTCTAGGGACACGCTGTTGGACCTCATCTCCAGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS TCA 72 bp CAGTCACATAGACCTTGCAACCAATCGCTGAAGCACTaGACTCCTTCCGGGGGCTTGGCAGATCTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: QSHRPCNQSLKH*TPSGGLADLPW
Trigger: CCAAGGCAGATCTGCCAAGCCCCCGGAAGGAGTTCAGTGCTTCAGCGATTGGTTGCAAGGTCTATGTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS TCA 72 bp CCCACCACATACAGCTTGTTGCCTGAAGCCACGGCATaGCAGGACATGCGTTTGGCTGTCATGTCCCCAATC +
Preference number: 6 (lower is better)
Translates to: PTTYSLLPEATA*QDMRLAVMSPI
Trigger: GATTGGGGACATGACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS TCA 72 bp CCCAAAGTAGCCTCCCACCACATACAGCTTGTTGCCTaGAGCCACGGCATGACAGGACATGCGTTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PKVASHHIQLVA*SHGMTGHAFGC
Trigger: ACAGCCAAACGCATGTCCTGTCATGCCGTGGCTTCAGGCAACAAGCTGTATGTGGTGGGAGGCTACTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 72 bp TCCACCGGTTCTCCGAGGGGTCAAAACACTGGACTTTaGACACCATATCTCGGTGGATGCTGGTCCCTCCAA +
Preference number: 6 (lower is better)
Translates to: STGSPRGQNTGL*TPYLGGCWSLQ
Trigger: TTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTCGGAGAACCGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CAA 90 bp GCAAAGGGACTGGTGACCACACCATCATTCAGCAAGATCTTGGTCTaGCAGCGGAAGGCCTCGTCTAAGATGAGCTTGGTGCACTCGTCC +
Preference number: 6 (lower is better)
Translates to: AKGLVTTPSFSKILV*QRKASSKMSLVHSS
Trigger: GGACGAGTGCACCAAGCTCATCTTAGACGAGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGATGGTGTGGTCACCAGTCCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 90 bp ATATCTCGGTGGATGCTGGTCCCTCCAAACACAAAGAGTTTCAGCTaGGCACTCACCACTGCAGCATTGCTGACACCGTCTCTCATGGGG +
Preference number: 6 (lower is better)
Translates to: ISRWMLVPPNTKSFS*ALTTAALLTPSLMG
Trigger: CCCCATGAGAGACGGTGTCAGCAATGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 72 bp TTGATTGTCCACCGGTTCTCCGAGGGGTCAAAACACTaGACTTTGGACACCATATCTCGGTGGATGCTGGTC +
Preference number: 6 (lower is better)
Translates to: LIVHRFSEGSKH*TLDTISRWMLV
Trigger: GACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTCGGAGAACCGGTGGACAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CAA 72 bp CTGGTGACCACACCATCATTCAGCAAGATCTTGGTCTaGCAGCGGAAGGCCTCGTCTAAGATGAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LVTTPSFSKILV*QRKASSKMSLV
Trigger: CACCAAGCTCATCTTAGACGAGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGATGGTGTGGTCACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 72 bp AAGGGACTGGTGACCACACCATCATTCAGCAAGATCTaGGTCTTGCAGCGGAAGGCCTCGTCTAAGATGAGC +
Preference number: 6 (lower is better)
Translates to: KGLVTTPSFSKI*VLQRKASSKMS
Trigger: GCTCATCTTAGACGAGGCCTTCCGCTGCAAGACCAAGATCTTGCTGAATGATGGTGTGGTCACCAGTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000206019.2
CDS CAA 72 bp TGGATGCTGGTCCCTCCAAACACAAAGAGTTTCAGCTaGGCACTCACCACTGCAGCATTGCTGACACCGTCT +
Preference number: 6 (lower is better)
Translates to: WMLVPPNTKSFS*ALTTAALLTPS
Trigger: AGACGGTGTCAGCAATGCTGCAGTGGTGAGTGCCAAGCTGAAACTCTTTGTGTTTGGAGGGACCAGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CAA 90 bp GCTTTGATTGTCCACCGGTTCTCCGAGGGGTCAAAACACTGGACTTaGGACACCATATCTCGGTGGATGCTGGTCCCTCCAAACACAAAG +
Preference number: 6 (lower is better)
Translates to: ALIVHRFSEGSKHWT*DTISRWMLVPPNTK
Trigger: CTTTGTGTTTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCCCTCGGAGAACCGGTGGACAATCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 72 bp AACACTGGACTTTGGACACCATATCTCGGTGGATGCTaGTCCCTCCAAACACAAAGAGTTTCAGCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: NTGLWTPYLGGC*SLQTQRVSAWH
Trigger: GTGCCAAGCTGAAACTCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS CCA 72 bp GGGTCAAAACACTGGACTTTGGACACCATATCTCGGTaGATGCTGGTCCCTCCAAACACAAAGAGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: GSKHWTLDTISR*MLVPPNTKSFS
Trigger: GCTGAAACTCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2
CDS GCA 72 bp CAAAACACTGGACTTTGGACACCATATCTCGGTGGATaGTGGTCCCTCCAAACACAAAGAGTTTCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: QNTGLWTPYLGG*WSLQTQRVSAW
Trigger: CCAAGCTGAAACTCTTTGTGTTTGGAGGGACCAGCATCCACCGAGATATGGTGTCCAAAGTCCAGTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092073.11
ENSMUST00000171155.4
ENSMUST00000205612.2
ENSMUST00000206019.2