Pregenerated sensors for KLHL23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042155Ensembl transcript IDs: ENSMUST00000053087.4
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTTGGGGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTaGCTCATAGGCCACCCAGACCTCATCTGGCTTAAAGGGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: IWGLTLQAHRGKGYI*LIGHPDLIWLKGSS Trigger: GCTGGACCCTTTAAGCCAGATGAGGTCTGGGTGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCCCCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR GCA 90 bp | TTTTTCTCTTTGATGTGTGTTCCACTGCCTAGCAGCTGTTCTACATaGTTTCTGGCCCTGGCATTCCATTGTCTACGCAGACATCTAACT | + |
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Preference number: 1 (lower is better) Translates to: FFSLMCVPLPSSCST*FLALAFHCLRRHLT Trigger: AGTTAGATGTCTGCGTAGACAATGGAATGCCAGGGCCAGAAAGCATGTAGAACAGCTGCTAGGCAGTGGAACACACATCAAAGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 90 bp | ATGTCTCCGGTGTACATGGATGAAGAAGCAGATGTACTCAGAGACTaGAGTCACAAAATCTGGTTAGTGGCAGAGCTGGCAAATAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: MSPVYMDEEADVLRD*SHKIWLVAELANKS Trigger: GCTTTTATTTGCCAGCTCTGCCACTAACCAGATTTTGTGACTTCAGTCTCTGAGTACATCTGCTTCTTCATCCATGTACACCGGAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 90 bp | TTTTTCGGTACAAACAATGACACTACTGTACACACCACACACATATaGAGTGACCGGATACTGAGAGTACTGAAGTCAAGACGAGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: FFGTNNDTTVHTTHI*SDRILRVLKSRRGP Trigger: AGGCCCTCGTCTTGACTTCAGTACTCTCAGTATCCGGTCACTTCATATGTGTGTGGTGTGTACAGTAGTGTCATTGTTTGTACCGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR GCA 90 bp | GAATGGTGCAGGGTTAGAATTAAAAATTTCCAGTGCCCTAGCATGTaGCAAAACACAATACCAAGGCACCATAGACTCTGCACTCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: EWCRVRIKNFQCPSM*QNTIPRHHRLCTLD Trigger: GTCAAGAGTGCAGAGTCTATGGTGCCTTGGTATTGTGTTTTGGCACATGCTAGGGCACTGGAAATTTTTAATTCTAACCCTGCACCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 90 bp | CATGGCGGCACACCTCACTATTCCATTAGCACACTTTCTTTAACATaGAGATCTTCTCTGTACTGTGACTATTGTTTACAATGCAGACAT | + |
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Preference number: 1 (lower is better) Translates to: HGGTPHYSISTLSLT*RSSLYCDYCLQCRH Trigger: ATGTCTGCATTGTAAACAATAGTCACAGTACAGAGAAGATCTTCATGTTAAAGAAAGTGTGCTAATGGAATAGTGAGGTGTGCCGCCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGAGGTCATGGCACATTTaGGGACTGACCCTGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWRSWHI*GLTLQA Trigger: TGCTTGCAGGGTCAGTCCCCAAATGTGCCATGACCT...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGATTCAGAGATCTGCCTaGCTCTGCCTCCCAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWIQRSA*LCLPSS Trigger: AGAACTTGGGAGGCAGAGGCAGGCAGATCTCTGAAT...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCACATGCTTTCTGGCCCTaGCATTCCATTGTCTACGCA | + |
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Preference number: 2 (lower is better) Translates to: GTDPASTQRKRVYLAHRPHAFWP*HSIVYA Trigger: TGCGTAGACAATGGAATGCCAGGGCCAGAAAGCATG...TGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR GCA 90 bp | GGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCACCAGTGCCCTAGCATGTaGCAAAACACAATACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GLTLQAHRGKGYIWLIGHQCPSM*QNTIPR Trigger: CCTTGGTATTGTGTTTTGGCACATGCTAGGGCACTG...GTGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR CCA 90 bp | GGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCACGTTCTACATGCTTTCTaGCCCTGGCATTCCATTGTC | + |
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Preference number: 2 (lower is better) Translates to: GLTLQAHRGKGYIWLIGHVLHAF*PWHSIV Trigger: GACAATGGAATGCCAGGGCCAGAAAGCATGTAGAAC...GTGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGTGTCTCCGGTGTACATaGATGAAGAAGCAGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWCLRCT*MKKQMY Trigger: GTACATCTGCTTCTTCATCCATGTACACCGGAGACA...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCAGCAAATTTTTCTCTTTaGTGTGTGTTCCACTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: GTDPASTQRKRVYLAHRPANFSL*CVFHCL Trigger: TAGGCAGTGGAACACACATCAAAGAGAAAAATTTGC...TGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR TCA 90 bp | TTAAAAATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCACATTTGGGGACTaGCCCTGCAAGCACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKIEFPSIVCVCVCVCVCGTFGD*PCKHTE Trigger: CTCTGTGTGCTTGCAGGGTCAGTCCCCAAATGTGCC...ACACACACACACACACACACACACACACACGATGGAAGGAAATTCGATTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR TCA 90 bp | ATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTGCATCAGCAAATATTTaGCTGTTGACTCAGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: IEFPSIVCVCVCVCVCTCASANI*LLTQSF Trigger: AAAGGACTGAGTCAACAGTCAAATATTTGCTGATGC...ACATGTACACACACACACACACACACACACACACACGATGGAAGGAAATTCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR TCA 90 bp | ATGAAAACAGCCCTTAGCATCAGCAAATATTTGACTGTTGACTCAGTCCTTTTTACCTATACCCAGTGCTaGTGCTACCAGGAAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: MKTALSISKYLTVDSVLFTYTQC*CYQEEK Trigger: CTTTTCTTCCTGGTAGCATCAGCACTGGGTATAGGT...AAAAAGGACTGAGTCAACAGTCAAATATTTGCTGATGCTAAGGGCTGTTTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTACTGTGACTATTGTTTACAATGCAGACATAAACATTCCCATGCATTTATTCAATTCAGAGATCTaGCTGCCTCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LCTVTIVYNADINIPMHLFNSEI*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGATCTCTGAATTGAA...TAAATGCATGGGAATGTTTATGTCTGCATTGTAAACAATAGTCACAGTACAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTACTGTGACTATTGTTTACAATGCAGACATAAACATTCCCATGCATTTAGATGTACTCAGAGACTaGAGTCACAAAATCTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LCTVTIVYNADINIPMHLDVLRD*SHKIWL Trigger: TAACCAGATTTTGTGACTTCAGTCTCTGAGTACATC...TAAATGCATGGGAATGTTTATGTCTGCATTGTAAACAATAGTCACAGTACAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTACTGTGACTATTGTTTACAATGCAGACATAAACATTCCCATGCATTTAGTTAACTCTCCTAACTaGACTGTTAAACACACATCA | + |
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Preference number: 2 (lower is better) Translates to: LCTVTIVYNADINIPMHLVNSPN*TVKHTS Trigger: TGATGTGTGTTTAACAGTTCAGTTAGGAGAGTTAAC...TAAATGCATGGGAATGTTTATGTCTGCATTGTAAACAATAGTCACAGTACAGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR GCA 72 bp | GCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATaGAGCTCTTGGGCCTGCGAGGTAAGCAATCTCACC | + |
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Preference number: 3 (lower is better) Translates to: APRSPCSPLRVK*SSWACEVSNLT Trigger: GGTGAGATTGCTTACCTCGCAGGCCCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR CAA 90 bp | GGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCACTGGCTGGCCTGGAAGTaGCTATGTAGACCAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GLTLQAHRGKGYIWLIGHWLAWK*LCRPGW Trigger: CCAGCCTGGTCTACATAGCAACTTCCAGGCCAGCCA...GTGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR-3UTR CAA 90 bp | GGACACATCCCTGTGAGGGTGCAGTTAGGCATCCACAGGATGCGGATGAGCTGGATAGACTCTGCACTCTaGACTACATTCCTAGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GHIPVRVQLGIHRMRMSWIDSAL*TTFLVR Trigger: CCTCACTAGGAATGTAGTCAAGAGTGCAGAGTCTAT...CCAGCTCATCCGCATCCTGTGGATGCCTAACTGCACCCTCACAGGGATGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 72 bp | CTGGCCTGGAAGTTGCTATGTAGACCAGGCTGGTCTTaGTGTCCTTCAATTCAGAGATCTGCCTGCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LAWKLLCRPGWS*CPSIQRSACLC Trigger: GCAGAGGCAGGCAGATCTCTGAATTGAAGGACATCAAGACCAGCCTGGTCTACATAGCAACTTCCAGGCCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR CCA 72 bp | CTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTaGCTCATAGGCCACCCAGACCTCATCTGGCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: LTLQAHRGKGYI*LIGHPDLIWLK Trigger: TTTAAGCCAGATGAGGTCTGGGTGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR GCA 72 bp | GCAGGTTCTCAATGTAGCTTTGGCTGGCCTGGAAGTTaGTATGTAGACCAGGCTGGTCTTGATGTCCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: AGSQCSFGWPGS*YVDQAGLDVLQ Trigger: TTGAAGGACATCAAGACCAGCCTGGTCTACATAGCAACTTCCAGGCCAGCCAAAGCTACATTGAGAACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR GCA 72 bp | TTGATGTGTGTTCCACTGCCTAGCAGCTGTTCTACATaGTTTCTGGCCCTGGCATTCCATTGTCTACGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LMCVPLPSSCST*FLALAFHCLRR Trigger: TCTGCGTAGACAATGGAATGCCAGGGCCAGAAAGCATGTAGAACAGCTGCTAGGCAGTGGAACACACATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR CCA 72 bp | AGACTTTTAAAGGCAGGTTCTCAATGTAGCTTTGGCTaGCCTGGAAGTTGCTATGTAGACCAGGCTGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: RLLKAGSQCSFG*PGSCYVDQAGL Trigger: AAGACCAGCCTGGTCTACATAGCAACTTCCAGGCCAGCCAAAGCTACATTGAGAACCTGCCTTTAAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR CCA 72 bp | CTCTGGATACAGAAAAATCCATGTCTCCGGTGTACATaGATGAAGAAGCAGATGTACTCAGAGACTGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LWIQKNPCLRCT*MKKQMYSETEV Trigger: GACTTCAGTCTCTGAGTACATCTGCTTCTTCATCCATGTACACCGGAGACATGGATTTTTCTGTATCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 72 bp | GGATACAGAAAAATCCATGTCTCCGGTGTACATGGATaGAGAAGCAGATGTACTCAGAGACTGAAGTCACAA | + |
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Preference number: 3 (lower is better) Translates to: GYRKIHVSGVHG*RSRCTQRLKSQ Trigger: TTGTGACTTCAGTCTCTGAGTACATCTGCTTCTTCATCCATGTACACCGGAGACATGGATTTTTCTGTATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 72 bp | ACAAACAATGACACTACTGTACACACCACACACATATaGAGTGACCGGATACTGAGAGTACTGAAGTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: TNNDTTVHTTHI*SDRILRVLKSR Trigger: TCTTGACTTCAGTACTCTCAGTATCCGGTCACTTCATATGTGTGTGGTGTGTACAGTAGTGTCATTGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR TCA 72 bp | ACACCTCACTATTCCATTAGCACACTTTCTTTAACATaGAGATCTTCTCTGTACTGTGACTATTGTTTACAA | + |
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Preference number: 3 (lower is better) Translates to: TPHYSISTLSLT*RSSLYCDYCLQ Trigger: TTGTAAACAATAGTCACAGTACAGAGAAGATCTTCATGTTAAAGAAAGTGTGCTAATGGAATAGTGAGGTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | GGACACATCCCTGTGAGGGTGCAGTTAGGCATCCACAGGATGCGGATGAGCTGGACACAAACGCATCCATaGGACCGCATGGCACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GHIPVRVQLGIHRMRMSWTQTHP*DRMALG Trigger: CCCGAGTGCCATGCGGTCTCATGGATGCGTTTGTGT...CCAGCTCATCCGCATCCTGTGGATGCCTAACTGCACCCTCACAGGGATGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGCAATGTCCAGGTGCCTaGCCAGAAACTGCTCACACG | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWQCPGA*PETAHT Trigger: CGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTG...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | CAGTTAGGCATCCACAGGATGCGGATGAGCTGGTGCAGGATGGGAAAGCGGCTGGCACAGTCCATATTCTaGGTGTGGGCTCGCAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: QLGIHRMRMSWCRMGKRLAQSIF*VWARSN Trigger: ATTACTGCGAGCCCACACCCAGAATATGGACTGTGC...CAGCCGCTTTCCCATCCTGCACCAGCTCATCCGCATCCTGTGGATGCCTAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGATCCATGAGACCGCATaGCACTCGGGAGATTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWIHETA*HSGDCP Trigger: TGGGCAATCTCCCGAGTGCCATGCGGTCTCATGGAT...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | ACATGTGAAAGGCAGAGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTGCACCTTGTCATAGGTaGAGCTTCCTCTGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TCERQRTAPRSPCSPLRVAPCHR*SFLCSH Trigger: GTGGCTACAGAGGAAGCTGCACCTATGACAAGGTGC...AACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCTCTGCCTTTCACATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | CAGTTAGGCATCCACAGGATGCGGATGAGCTGGTGCAGGATGGGAAAGCGGCTGCCATTCGTTGATGTCTaGATTGTAGCTCTGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: QLGIHRMRMSWCRMGKRLPFVDV*IVALHL Trigger: AAGGTGCAGAGCTACAATTCAGACATCAACGAATGG...CAGCCGCTTTCCCATCCTGCACCAGCTCATCCGCATCCTGTGGATGCCTAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGCGATTCTCTACATCGTaGGCAGTCCACTTAATGACC | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWRFSTS*AVHLMT Trigger: GGTCATTAAGTGGACTGCTCACGATGTAGAGAATCG...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGAGTAGTAGCCTCCAATaGTATACATGGTGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWSSSLQ*YTWWLW Trigger: CCACAGCCACCATGTATATCATTGGAGGCTACTACT...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | TGGCCTGGAAGTTGCTATGTAGACCAGGCTGGTCTTGATGTCCTTCAATTCAGAGGTAATACCTGGCATTaGGCATGGGCAGGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: WPGSCYVDQAGLDVLQFRGNTWH*AWAGLL Trigger: CAGAAGGCCTGCCCATGCTCAATGCCAGGTATTACC...TCTGAATTGAAGGACATCAAGACCAGCCTGGTCTACATAGCAACTTCCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGGACAATGGAAGATTATaGCTGAAGGACACTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWDNGRL*LKDTEG Trigger: CCCTTCAGTGTCCTTCAGGCATAATCTTCCATTGTC...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | TGTGGCCGAAACACACAGGGACACATCCCTGTGAGGGTGCAGTTAGGCATCCACCACCGTAACTCTCCCTaGTATAATCTGGTATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CGRNTQGHIPVRVQLGIHHRNSP*YNLVFL Trigger: CAGAAATACCAGATTATACCAGGGAGAGTTACGGTG...GTGGATGCCTAACTGCACCCTCACAGGGATGTGTCCCTGTGTGTTTCGGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | TGTGGCCGAAACACACAGGGACACATCCCTGTGAGGGTGCAGTTAGGCATCCACCCATGTAAAACGTTCTaGATGCATCCAGAAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: CGRNTQGHIPVRVQLGIHPCKTF*MHPENP Trigger: TGGATTTTCTGGATGCATTCAGAACGTTTTACATGG...GTGGATGCCTAACTGCACCCTCACAGGGATGTGTCCCTGTGTGTTTCGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGATGGAAGATTATGCCTaGAGGACACTGAAGGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWMEDYA*RTLKGN Trigger: ATTACCCTTCAGTGTCCTTCAGGCATAATCTTCCAT...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | ACATGTGAAAGGCAGAGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTATCCAGAAAATCCACTaGATGCGACGAATCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TCERQRTAPRSPCSPLRVIQKIH*MRRILE Trigger: TTCAAGGATTCGTCGCATCCAGTGGATTTTCTGGAT...AACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCTCTGCCTTTCACATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGGGTCTATGTCTATGTTaGTATAGCTTAGCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWGLCLC*YSLAGC Trigger: ACAACCTGCTAAGCTATATCAACATAGACATAGACC...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | GGGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCAACCTTTAATCATGTTTaGGATAGGAAGCCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GTDPASTQRKRVYLAHRPTFNHV*DRKPLL Trigger: GAGAAGTGGCTTCCTATCGCAAACATGATTAAAGGT...TGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | AGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTAAATGCAGCTCTTGGAAATATCATGGTGGATaGCCGACAGTTTTATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTAPRSPCSPLRVKCSSWKYHGG*PTVLFY Trigger: GTAAAATAAAACTGTCGGGCATCCACCATGATATTT...CCAAGAGCTGCATTTAACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | ACATGTGAAAGGCAGAGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTATAATCTGGTATTTCTaGTCCCTGAATCCAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: TCERQRTAPRSPCSPLRVIIWYF*SLNPNI Trigger: AATGTTTGGATTCAGGGAGCAGAAATACCAGATTAT...AACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCTCTGCCTTTCACATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | AACACAATACCAAGGCACCATAGACTCTGCACTCTTGACTACATTCCTAGTGAGTGCCTGACCAGAAACTaGTCACACGCCTTCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NTIPRHHRLCTLDYIPSECLTRN*SHAFFT Trigger: TGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCA...CTCACTAGGAATGTAGTCAAGAGTGCAGAGTCTATGGTGCCTTGGTATTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | ACAGCACATCATAGACTTTTAAAGGCAGGTTCTCAATGTAGCTTTGGCTGGCCTTGGCACTCGGGAGATTaGCCACTATTTCCCACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TAHHRLLKAGSQCSFGWPWHSGD*PLFPTY Trigger: ATAAGTGGGAAATAGTGGGCAATCTCCCGAGTGCCA...AGGCCAGCCAAAGCTACATTGAGAACCTGCCTTTAAAAGTCTATGATGTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | ATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTGTGGCTGTGGACCTCTaGGAAATCTCTTTATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IEFPSIVCVCVCVCVCTCVAVDL*EISLCM Trigger: CATGCATAAAGAGATTTCCCAGAGGTCCACAGCCAC...ACATGTACACACACACACACACACACACACACACACGATGGAAGGAAATTCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR CCA 90 bp | GGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCACCCACTTATTAAGATCTaGATCGTATTTCTCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: GLTLQAHRGKGYIWLIGHPLIKI*IVFLDT Trigger: AGTATCGAGAAATACGATCCAGATCTTAATAAGTGG...GTGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| 3UTR CAA 72 bp | AAAACACAATACCAAGGCACCATAGACTCTGCACTCTaGACTACATTCCTAGTGAGGACCTGGTTAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTQYQGTIDSAL*TTFLVRTWLVL Trigger: CAGGACTAACCAGGTCCTCACTAGGAATGTAGTCAAGAGTGCAGAGTCTATGGTGCCTTGGTATTGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR GCA 90 bp | ATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTTTATCAATGTCCAGGTaGCTGACCAGAAACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IEFPSIVCVCVCVCVCTCLSMSR*LTRNCS Trigger: TGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAA...ACATGTACACACACACACACACACACACACACACACGATGGAAGGAAATTCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | ACAGCACATCATAGACTTTTAAAGGCAGGTTCTCAATGTAGCTTTGGCTGGCCTTATACATGGTGGCTGTaGACCTCTGGGAAATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAHHRLLKAGSQCSFGWPYTWWL*TSGKSL Trigger: AAGAGATTTCCCAGAGGTCCACAGCCACCATGTATA...AGGCCAGCCAAAGCTACATTGAGAACCTGCCTTTAAAAGTCTATGATGTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR GCA 90 bp | ACAGCACATCATAGACTTTTAAAGGCAGGTTCTCAATGTAGCTTTGGCTGGCCTTTTACAGAAAGAAACTaGAGCAGATCCGCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAHHRLLKAGSQCSFGWPFTERN*SRSAAS Trigger: TGAAGCAGCGGATCTGCTGCAGTTTCTTTCTGTAAA...AGGCCAGCCAAAGCTACATTGAGAACCTGCCTTTAAAAGTCTATGATGTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGGAAGTTGCTATGTAGACCAGGCTGGTCTTGATGTCCTTCAATTCAGATCCAAAATATCATGGTaGATGCCCGACAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: WPGSCYVDQAGLDVLQFRSKISW*MPDSFI Trigger: AATAAAACTGTCGGGCATCCACCATGATATTTTGGA...TCTGAATTGAAGGACATCAAGACCAGCCTGGTCTACATAGCAACTTCCAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR CCA 90 bp | ACAGCACATCATAGACTTTTAAAGGCAGGTTCTCAATGTAGCTTTGGCTGGCCTAGTTCTGAGCACACATaGAATTCTGCAAAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAHHRLLKAGSQCSFGWPSSEHT*NSAKEC Trigger: GCACTCTTTTGCAGAATTCCATGTGTGCTCAGAACT...AGGCCAGCCAAAGCTACATTGAGAACCTGCCTTTAAAAGTCTATGATGTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CCA 90 bp | ACAGCACATCATAGACTTTTAAAGGCAGGTTCTCAATGTAGCTTTGGCTGGCCTCTCCCTGGTATAATCTaGTATTTCTGCTCCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAHHRLLKAGSQCSFGWPLPGII*YFCSLN Trigger: ATTCAGGGAGCAGAAATACCAGATTATACCAGGGAG...AGGCCAGCCAAAGCTACATTGAGAACCTGCCTTTAAAAGTCTATGATGTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR GCA 90 bp | ATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTTCCAGAAATTCTTCTTaGTGCCAAACTTCCTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IEFPSIVCVCVCVCVCTCSRNSS*CQTSLN Trigger: GTTTAAGGAAGTTTGGCAGCAAGAAGAATTTCTGGA...ACATGTACACACACACACACACACACACACACACACGATGGAAGGAAATTCGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR TCA 90 bp | TTAAAAATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCCTGAAGGACACTaGAGGGTAATATCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKIEFPSIVCVCVCVCVCMPEGH*RVISVN Trigger: ATTTACTGATATTACCCTTCAGTGTCCTTCAGGCAT...ACACACACACACACACACACACACACACACGATGGAAGGAAATTCGATTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS-3UTR TCA 90 bp | ACAGCCCTTAGCATCAGCAAATATTTGACTGTTGACTCAGTCCTTTTTAGAGTTGTTTTCAAATGGAACTaGGCACAGTCCATATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TALSISKYLTVDSVLFRVVFKWN*AQSIFW Trigger: CCAGAATATGGACTGTGCTCAGTTCCATTTGAAAAC...AACTCTAAAAAGGACTGAGTCAACAGTCAAATATTTGCTGATGCTAAGGGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | ATGAAAACAGCCCTTAGCATCAGCAAATATTTGACTGTTGACTCAGTCCTTTTTAATTCTGCAAAAGAGTaGATCCCGATACAGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: MKTALSISKYLTVDSVLFNSAKE*IPIQLS Trigger: TGATAACTGTATCGGGATGCACTCTTTTGCAGAATT...AAAAAGGACTGAGTCAACAGTCAAATATTTGCTGATGCTAAGGGCTGTTTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTACTGTGACTATTGTTTACAATGCAGACATAAACATTCCCATGCATTTATGGGAAATCTCTTTATaGATGGGATTCAAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LCTVTIVYNADINIPMHLWEISL*MGFKAL Trigger: CAATGCCTTGAATCCCATGCATAAAGAGATTTCCCA...TAAATGCATGGGAATGTTTATGTCTGCATTGTAAACAATAGTCACAGTACAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS TCA 90 bp | GCGCCGTCTCTCTCCACTCGTTCTGTTCCGGGTCATAGCACTCTGTaGTCGTGGTCTGTCCGCCGACTAGGTAGAGCTTGTTTTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: APSLSTRSVPGHSTL*SWSVRRLGRACFQM Trigger: CATTTGAAAACAAGCTCTACCTAGTCGGCGGACAGACCACGATCACAGAGTGCTATGACCCGGAACAGAACGAGTGGAGAGAGACGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CAA 90 bp | GGGACTGACCCTGCAAGCACACAGAGGAAAAGGGTATATCTGGCTCATAGGCCAATGGCACTCGGGAGATaGCCCACTATTTCCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: GTDPASTQRKRVYLAHRPMALGR*PTISHL Trigger: TAAGTGGGAAATAGTGGGCAATCTCCCGAGTGCCAT...TGGCCTATGAGCCAGATATACCCTTTTCCTCTGTGTGCTTGCAGGGTCAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CAA 90 bp | CAGTTAGGCATCCACAGGATGCGGATGAGCTGGTGCAGGATGGGAAAGCGGCTGATGGGATTCAAGGCATaGTATATTAGGGAACGTATC | + |
|
Preference number: 5 (lower is better) Translates to: QLGIHRMRMSWCRMGKRLMGFKA*YIRERI Trigger: GATACGTTCCCTAATATACAATGCCTTGAATCCCAT...CAGCCGCTTTCCCATCCTGCACCAGCTCATCCGCATCCTGTGGATGCCTAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CAA 90 bp | ATCGAATTTCCTTCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTGCAGATACGTCCCCTTaGAGTAGGAGTAGCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IEFPSIVCVCVCVCVCTCADTSP*SRSSPR Trigger: CCGGGGGCTACTCCTACTCAAAGGGGACGTATCTGC...ACATGTACACACACACACACACACACACACACACACGATGGAAGGAAATTCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 90 bp | TTCTGGGTGTGGGCTCGCAGTAATAAGGCTCCATTCGTTGATGTCTaGATTGTAGCTCTGCACCTTGTCATAGGTGCAGCTTCCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FWVWARSNKAPFVDV*IVALHLVIGAASSV Trigger: TACAGAGGAAGCTGCACCTATGACAAGGTGCAGAGCTACAATTCAGACATCAACGAATGGAGCCTTATTACTGCGAGCCCACACCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 90 bp | TGCATCCCGATACAGTTATCAATGTCCAGGTGCCTGACCAGAAACTaGTCACACGCCTTCTTTACAGAAAGAAACTGCAGCAGATCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CIPIQLSMSRCLTRN*SHAFFTERNCSRSA Trigger: AGCGGATCTGCTGCAGTTTCTTTCTGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAACTGTATCGGGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS CCA 90 bp | GAGCAGAGGATCCTGCGGGATTCCTTCTCTAGTTCTGAGCACACATaGAATTCTGCAAAAGAGTGCATCCCGATACAGTTATCAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EQRILRDSFSSSEHT*NSAKECIPIQLSMS Trigger: GGACATTGATAACTGTATCGGGATGCACTCTTTTGCAGAATTCCATGTGTGCTCAGAACTAGAGAAGGAATCCCGCAGGATCCTCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CAA 90 bp | ACATGTGAAAGGCAGAGGACAGCCCCCAGGAGTCCATGTTCTCCTCTCAGGGTTTTCCAGAAATTCTTCTaGCTGCCAAACTTCCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCERQRTAPRSPCSPLRVFQKFF*LPNFLK Trigger: TTTAAGGAAGTTTGGCAGCAAGAAGAATTTCTGGAA...AACCCTGAGAGGAGAACATGGACTCCTGGGGGCTGTCCTCTGCCTTTCACATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 90 bp | CTGCAAAAGAGTGCATCCCGATACAGTTATCAATGTCCAGGTGCCTaGCCAGAAACTGCTCACACGCCTTCTTTACAGAAAGAAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQKSASRYSYQCPGA*PETAHTPSLQKETA Trigger: TGCAGTTTCTTTCTGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAACTGTATCGGGATGCACTCTTTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 90 bp | CCCATATGTGGACCTCTGATAAAGGATGCCAGTAGTAGCCTCCAATaGTATACATGGTGGCTGTGGACCTCTGGGAAATCTCTTTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PICGPLIKDASSSLQ*YTWWLWTSGKSLYA Trigger: TGCATAAAGAGATTTCCCAGAGGTCCACAGCCACCATGTATATCATTGGAGGCTACTACTGGCATCCTTTATCAGAGGTCCACATATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 90 bp | AAGATCTGGATCGTATTTCTCGATACTCTGCAGATACGTCCCCTTTaGGTAGGAGTAGCCCCCGGTTACGTAGATGCATCCATTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: KIWIVFLDTLQIRPL*VGVAPGYVDASIHD Trigger: ATCATGAATGGATGCATCTACGTAACCGGGGGCTACTCCTACTCAAAGGGGACGTATCTGCAGAGTATCGAGAAATACGATCCAGATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 90 bp | TGCCTGACCAGAAACTGCTCACACGCCTTCTTTACAGAAAGAAACTaGAGCAGATCCGCTGCTTCAAGAAGGCTCTGTACATTTCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CLTRNCSHAFFTERN*SRSAASRRLCTFLL Trigger: TAAGAGAAATGTACAGAGCCTTCTTGAAGCAGCGGATCTGCTGCAGTTTCTTTCTGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 90 bp | GATTCCTTCTCTAGTTCTGAGCACACATGGAATTCTGCAAAAGAGTaGATCCCGATACAGTTATCAATGTCCAGGTGCCTGACCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSFSSSEHTWNSAKE*IPIQLSMSRCLTRN Trigger: GTTTCTGGTCAGGCACCTGGACATTGATAACTGTATCGGGATGCACTCTTTTGCAGAATTCCATGTGTGCTCAGAACTAGAGAAGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 90 bp | AATTCTGCAAAAGAGTGCATCCCGATACAGTTATCAATGTCCAGGTaGCTGACCAGAAACTGCTCACACGCCTTCTTTACAGAAAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSAKECIPIQLSMSR*LTRNCSHAFFTERN Trigger: GTTTCTTTCTGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAACTGTATCGGGATGCACTCTTTTGCAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 90 bp | GAAGGCCTAGAGCCGTCTTTAAGTACACTGGGTCTATGTCTATGTTaGTATAGCTTAGCAGGTTGTAGATGCATTCGATTCGATTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: EGLEPSLSTLGLCLC*YSLAGCRCIRFDSL Trigger: TAGAGAATCGAATCGAATGCATCTACAACCTGCTAAGCTATATCAACATAGACATAGACCCAGTGTACTTAAAGACGGCTCTAGGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 90 bp | CCAATGATATACATGGTGGCTGTGGACCTCTGGGAAATCTCTTTATaGATGGGATTCAAGGCATTGTATATTAGGGAACGTATCTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: PMIYMVAVDLWEISL*MGFKALYIRERILF Trigger: AAATAAGATACGTTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACCATGTATATCATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS-3UTR CAA 90 bp | ATGAAAACAGCCCTTAGCATCAGCAAATATTTGACTGTTGACTCAGTCCTTTTTCCTGAATCCAAACATTaGTCAAAGGGTCCCATATGT | + |
|
Preference number: 5 (lower is better) Translates to: MKTALSISKYLTVDSVLFPESKH*SKGPIC Trigger: ACATATGGGACCCTTTGACAAATGTTTGGATTCAGG...AAAAAGGACTGAGTCAACAGTCAAATATTTGCTGATGCTAAGGGCTGTTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 72 bp | CTCTCCACTCGTTCTGTTCCGGGTCATAGCACTCTGTaGTCGTGGTCTGTCCGCCGACTAGGTAGAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSTRSVPGHSTL*SWSVRRLGRAC Trigger: ACAAGCTCTACCTAGTCGGCGGACAGACCACGATCACAGAGTGCTATGACCCGGAACAGAACGAGTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS CAA 72 bp | GATCGTATTTCTCGATACTCTGCAGATACGTCCCCTTaGAGTAGGAGTAGCCCCCGGTTACGTAGATGCATC | + |
|
Preference number: 6 (lower is better) Translates to: DRISRYSADTSP*SRSSPRLRRCI Trigger: GATGCATCTACGTAACCGGGGGCTACTCCTACTCAAAGGGGACGTATCTGCAGAGTATCGAGAAATACGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS TCA 72 bp | GGACCTCTGATAAAGGATGCCAGTAGTAGCCTCCAATaGTATACATGGTGGCTGTGGACCTCTGGGAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLIKDASSSLQ*YTWWLWTSGKS Trigger: AGATTTCCCAGAGGTCCACAGCCACCATGTATATCATTGGAGGCTACTACTGGCATCCTTTATCAGAGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 72 bp | TGGGCTCGCAGTAATAAGGCTCCATTCGTTGATGTCTaGATTGTAGCTCTGCACCTTGTCATAGGTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WARSNKAPFVDV*IVALHLVIGAA Trigger: AGCTGCACCTATGACAAGGTGCAGAGCTACAATTCAGACATCAACGAATGGAGCCTTATTACTGCGAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS TCA 72 bp | AGTGCATCCCGATACAGTTATCAATGTCCAGGTGCCTaGCCAGAAACTGCTCACACGCCTTCTTTACAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SASRYSYQCPGA*PETAHTPSLQK Trigger: TTTCTGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAACTGTATCGGGATGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS GCA 72 bp | AGAAACTGCTCACACGCCTTCTTTACAGAAAGAAACTaGAGCAGATCCGCTGCTTCAAGAAGGCTCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: RNCSHAFFTERN*SRSAASRRLCT Trigger: TGTACAGAGCCTTCTTGAAGCAGCGGATCTGCTGCAGTTTCTTTCTGTAAAGAAGGCGTGTGAGCAGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS GCA 72 bp | AAAGAGTGCATCCCGATACAGTTATCAATGTCCAGGTaGCTGACCAGAAACTGCTCACACGCCTTCTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: KECIPIQLSMSR*LTRNCSHAFFT Trigger: TGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAACTGTATCGGGATGCACTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS CCA 72 bp | AGACATTATACACACAAACGCATCCATGAGACCGCATaGCACTCGGGAGATTGCCCACTATTTCCCACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: RHYTHKRIHETA*HSGDCPLFPTY Trigger: ATAAGTGGGAAATAGTGGGCAATCTCCCGAGTGCCATGCGGTCTCATGGATGCGTTTGTGTGTATAATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS GCA 72 bp | ATACAGTTATCAATGTCCAGGTGCCTGACCAGAAACTaGTCACACGCCTTCTTTACAGAAAGAAACTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IQLSMSRCLTRN*SHAFFTERNCS Trigger: GCTGCAGTTTCTTTCTGTAAAGAAGGCGTGTGAGCAGTTTCTGGTCAGGCACCTGGACATTGATAACTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS GCA 72 bp | TCTAGTTCTGAGCACACATGGAATTCTGCAAAAGAGTaGATCCCGATACAGTTATCAATGTCCAGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSEHTWNSAKE*IPIQLSMSRCL Trigger: CAGGCACCTGGACATTGATAACTGTATCGGGATGCACTCTTTTGCAGAATTCCATGTGTGCTCAGAACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
||
| CDS CCA 72 bp | ATCCTGCGGGATTCCTTCTCTAGTTCTGAGCACACATaGAATTCTGCAAAAGAGTGCATCCCGATACAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ILRDSFSSSEHT*NSAKECIPIQL Trigger: TAACTGTATCGGGATGCACTCTTTTGCAGAATTCCATGTGTGCTCAGAACTAGAGAAGGAATCCCGCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS CCA 72 bp | CGGGAGATTGCCCACTATTTCCCACTTATTAAGATCTaGATCGTATTTCTCGATACTCTGCAGATACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: REIAHYFPLIKI*IVFLDTLQIRP Trigger: GGGACGTATCTGCAGAGTATCGAGAAATACGATCCAGATCTTAATAAGTGGGAAATAGTGGGCAATCTCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS CAA 90 bp | TCTCCCTGGTATAATCTGGTATTTCTGCTCCCTGAATCCAAACATTaGTCAAAGGGTCCCATATGTGGACCTCTGATAAAGGATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPWYNLVFLLPESKH*SKGPICGPLIKDAS Trigger: ACTGGCATCCTTTATCAGAGGTCCACATATGGGACCCTTTGACAAATGTTTGGATTCAGGGAGCAGAAATACCAGATTATACCAGGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 72 bp | TACATGGTGGCTGTGGACCTCTGGGAAATCTCTTTATaGATGGGATTCAAGGCATTGTATATTAGGGAACGT | + |
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Preference number: 6 (lower is better) Translates to: YMVAVDLWEISL*MGFKALYIRER Trigger: ACGTTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACCATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS GCA 72 bp | AACACCGTAACTCTCCCTGGTATAATCTGGTATTTCTaGTCCCTGAATCCAAACATTTGTCAAAGGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NTVTLPGIIWYF*SLNPNICQRVP Trigger: TGGGACCCTTTGACAAATGTTTGGATTCAGGGAGCAGAAATACCAGATTATACCAGGGAGAGTTACGGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS CAA 90 bp | GCTGTGGACCTCTGGGAAATCTCTTTATGCATGGGATTCAAGGCATaGTATATTAGGGAACGTATCTTATTTTCAGTTAGCAGGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: AVDLWEISLCMGFKA*YIRERILFSVSRQL Trigger: AAGCTGCCTGCTAACTGAAAATAAGATACGTTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS TCA 72 bp | GAGCCGTCTTTAAGTACACTGGGTCTATGTCTATGTTaGTATAGCTTAGCAGGTTGTAGATGCATTCGATTC | + |
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Preference number: 6 (lower is better) Translates to: EPSLSTLGLCLC*YSLAGCRCIRF Trigger: GAATCGAATGCATCTACAACCTGCTAAGCTATATCAACATAGACATAGACCCAGTGTACTTAAAGACGGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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| CDS CAA 72 bp | CTCTGGGAAATCTCTTTATGCATGGGATTCAAGGCATaGTATATTAGGGAACGTATCTTATTTTCAGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LWEISLCMGFKA*YIRERILFSVS Trigger: GCTAACTGAAAATAAGATACGTTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053087.4 |
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