Pregenerated sensors for KLHL21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073700Ensembl transcript IDs: ENSMUST00000097773.4
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATGTGATAAGCAGTGGGTTACAGCCCAGAGCCAGTGGCAGAGGTaGCGCCCAGGGAGGGACAGTCCTGGACTCCCGGTGGGCACACAA | + |
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Preference number: 1 (lower is better) Translates to: TCDKQWVTAQSQWQR*RPGRDSPGLPVGTQ Trigger: TTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCTGCCACTGGCTCTGGGCTGTAACCCACTGCTTATCACATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR TCA 90 bp | TTAGAAGCAGGGGTCTCTGCTCCCAGGCCCTTAGCTAAGTGTCAGTaGGGCCCCCGAGGAGCCACCACAGCAAGCCAGCTCTGTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LEAGVSAPRPLAKCQ*GPRGATTASQLCEL Trigger: AAGCTCACAGAGCTGGCTTGCTGTGGTGGCTCCTCGGGGGCCTCACTGACACTTAGCTAAGGGCCTGGGAGCAGAGACCCCTGCTTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 90 bp | CCCACACATCCCCAAGGGAACCCTAGGTCACCAGCGGGCATCGGTTaGGAGAGCACTGCCCTCTACCTACCATCTTTCCCAGAGTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PTHPQGNPRSPAGIG*ESTALYLPSFPESG Trigger: ACCTGACTCTGGGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACCTAGGGTTCCCTTGGGGATGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 90 bp | TCCAGGAGAGTCCCAGGGAGGGCCTCCTTGCCAGGCAAGAACACGTaGTATAGGGACAGAGCTTGGACTCACACTGTGACAGTCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: SRRVPGRASLPGKNT*YRDRAWTHTVTVHQ Trigger: CTGGTGGACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 90 bp | AGCCCAGAGCCAGTGGCAGAGGTGACGCCCAGGGAGGGACAGTCCTaGACTCCCGGTGGGCACACAAAGTGCTTACAATTCTTACTATCC | + |
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Preference number: 1 (lower is better) Translates to: SPEPVAEVTPREGQS*TPGGHTKCLQFLLS Trigger: GGATAGTAAGAATTGTAAGCACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCTGCCACTGGCTCTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 90 bp | AACCTGAGTAGCTCTGGAGCAGGGCAGAGGGGCCCTGTGCAAGTGTaGACTATCCTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: NLSSSGAGQRGPVQV*TILQLIAAGRVLPL Trigger: CAGAGGAAGGACACGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGGCCCCTCTGCCCTGCTCCAGAGCTACTCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 90 bp | CACCCTGCTGTGGCAAGGCACTCCATAGCAGAGCGACAACTCTGGTaGCCCTGGGAGGCAGCTCTTTTTAAGGTTCAGAGAAAAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: HPAVARHSIAERQLW*PWEAALFKVQRKES Trigger: GCTTTCTTTTCTCTGAACCTTAAAAAGAGCTGCCTCCCAGGGCCACCAGAGTTGTCGCTCTGCTATGGAGTGCCTTGCCACAGCAGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 90 bp | AGTGGCAGAGGTGACGCCCAGGGAGGGACAGTCCTGGACTCCCGGTaGGCACACAAAGTGCTTACAATTCTTACTATCCTTAGTTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SGRGDAQGGTVLDSR*AHKVLTILTILSFG Trigger: TCCAAAACTAAGGATAGTAAGAATTGTAAGCACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCTGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR TCA 90 bp | TACAGAACAGACAAAAATAAATATACAAATCTGCCCAGCCACTGGTaGCTGAGTGCCGCCTTCCTAAGGCAGGCAGGCAGTCTTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: YRTDKNKYTNLPSHW*LSAAFLRQAGSLPK Trigger: CTTAGGAAGACTGCCTGCCTGCCTTAGGAAGGCGGCACTCAGTCACCAGTGGCTGGGCAGATTTGTATATTTATTTTTGTCTGTTCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGCTGGAGCCACTTCCCTaGAGGTGCCAGGCCCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: PAVNCCRSCPSSGKPPSLLEPLP*RCQAPY Trigger: GTAAGGGGCCTGGCACCTGCAGGGAAGTGGCTCCAG...CAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTGACGCCCAGGGAGGGACAGTCCTGGACTCCCGGTGGGCACACAAAGTGTTTCCCAGAGTCAGGTaGCCAGCAGAGCATTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: RGDAQGGTVLDSRWAHKVFPRVR*PAEHSR Trigger: TCTAGAATGCTCTGCTGGGCACCTGACTCTGGGAAA...CACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGCAGGACCTTCTGCCCTaGGAGCACACAGGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PAVNCCRSCPSSGKPPSLQDLLP*EHTGPG Trigger: TCCTGGGCCTGTGTGCTCCCAGGGCAGAAGGTCCTG...CAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR TCA 90 bp | GGTCACCAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCAGCCTTTGTTTTCCCTaGTTCCCAGTGCTCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GHQRASVGRALPSTYHLSSLCFP*FPVLQA Trigger: GGCTTGGAGCACTGGGAATCAGGGAAAACAAAGGCT...GGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGGGGCCCTGTGCAAGTGTGCACTATCCTGCAGTTAATTGCTGCAGGTCGCATTACAGGACCTTCTaGCCTGGGAGCACACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AEGPCASVHYPAVNCCRSHYRTF*PGSTQA Trigger: GGCCTGTGTGCTCCCAGGGCAGAAGGTCCTGTAATG...CGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGGCCCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CCA 90 bp | GGTCACCAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCGCATTGGAGGAGCCTTaGGACTGGATGGGGAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GHQRASVGRALPSTYHLSALEEP*DWMGSL Trigger: TAAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGC...GGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCAGGGAGGGCCTCCTTaGCAGGCAAGAACACGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LQLIAAGRVLPLESLLACQGGPP*QARTRA Trigger: AGCACGTGTTCTTGCCTGGCAAGGAGGCCCTCCCTG...ACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGGGGCCCTGTGCAAGTGTGCACTATCCTGCAGTTAATTGCTGCAGGTCGCTCTACCTGCAGCATTaGAGGAGCCTTGGGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: AEGPCASVHYPAVNCCRSLYLQH*RSLGTG Trigger: TCCAGTCCCAAGGCTCCTCCAATGCTGCAGGTAGAG...CGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGGCCCCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGCACTCCATAGCAGAGCGACAACTCTGGTGGCCCTGGGAGGCAGCTCTTTTTTCCCTGATTCCCAGTaGTCCAAGCCAGGCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: KALHSRATTLVALGGSSFFPDSQ*SKPGHF Trigger: AAAGTGGCCTGGCTTGGAGCACTGGGAATCAGGGAA...AAAAGAGCTGCCTCCCAGGGCCACCAGAGTTGTCGCTCTGCTATGGAGTGCCTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCCAGCTCTGTGAGCTTTaGTCCCTGTCCTCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: AVNCCRSCPSSGKPPSLSQLCEL*SLSSRR Trigger: TCTCCTGGAGGACAGGGAGCAAAGCTCACAGAGCTG...GGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTGGATCCCCTAAGCTGTaGTCCAGGTGCCCTAGTACT | + |
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Preference number: 2 (lower is better) Translates to: LQLIAAGRVLPLESLLACGSPKL*SRCPST Trigger: AGTACTAGGGCACCTGGACCACAGCTTAGGGGATCC...ACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCTGAAGGCTGATTCATaGTGGTGGTCACCACCACCT | + |
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Preference number: 2 (lower is better) Translates to: LQLIAAGRVLPLESLLACLKADS*WWSPPP Trigger: AGGTGGTGGTGACCACCATCATGAATCAGCCTTCAG...ACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGCATTGGAGGAGCCTTGGGACTGGATGGGGAGTTTAGCACTTCACTCTAGCGCTGGGGGTAACTTCTaGAGGCTGATTCATGATGGT | + |
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Preference number: 2 (lower is better) Translates to: AALEEPWDWMGSLALHSSAGGNF*RLIHDG Trigger: ACCATCATGAATCAGCCTTCAGAAGTTACCCCCAGC...GCTAGAGTGAAGTGCTAAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATGAAACAAGCCTAACCCTAAGCAAGCCAGCTCTGTaGGCTTTGCTCCCTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TRWKDGLVAPENETSLTLSKPAL*ALLPVL Trigger: GAGGACAGGGAGCAAAGCTCACAGAGCTGGCTTGCT...TAGGGTTAGGCTTGTTTCATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CCA 90 bp | TTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCCCAACAACTCTGGTGGCCCTaGGAGGCAGCTCTTTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LIAAGRVLPLESLLACPQQLWWP*EAALFK Trigger: CTTAAAAAGAGCTGCCTCCCAGGGCCACCAGAGTTG...TTGGGGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTTATAGGGACAGAGCTTaGACTCACACTGTGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LQLIAAGRVLPLESLLACYRDRA*THTVTV Trigger: GACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATA...ACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCCAGAGTAGAAAAAGGCAACTCTaGACTTTGGCTTTGTCTATA | + |
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Preference number: 2 (lower is better) Translates to: QRASVGRALPSTYHLSQSRKRQL*TLALSI Trigger: TATAGACAAAGCCAAAGTTCAGAGTTGCCTTTTTCT...ACTCTGGGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCCCACTTCCCTGCAGGTaGCAGGCCCCTTACACCAAG | + |
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Preference number: 2 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPPLPCR*QAPYTK Trigger: CTTGGTGTAAGGGGCCTGGCACCTGCAGGGAAGTGG...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATGAAACAAGCCTAACCCTACAGCTCCCAAACTCATaGAACCACTCAAAGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: TRWKDGLVAPENETSLTLQLPNS*NHSKSQ Trigger: TTGTGACTTTGAGTGGTTTCATGAGTTTGGGAGCTG...TAGGGTTAGGCTTGTTTCATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCAAGCTGTGGTCCAGGTaGCCTAGTACTTGTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPKLWSR*PSTCVP Trigger: AGGGACACAAGTACTAGGGCACCTGGACCACAGCTT...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | CGCTCACTAAGCACCCTGGAGCCACTTCCCTGCAGGTaGCAGGCCCCTTACACCAAGGTCCTCCCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: RSLSTLEPLPCR*QAPYTKVLPWA Trigger: GGCCCAGGGGAGGACCTTGGTGTAAGGGGCCTGGCACCTGCAGGGAAGTGGCTCCAGGGTGCTTAGTGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR TCA 72 bp | GGGGTCTCTGCTCCCAGGCCCTTAGCTAAGTGTCAGTaGGGCCCCCGAGGAGCCACCACAGCAAGCCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: GVSAPRPLAKCQ*GPRGATTASQL Trigger: GAGCTGGCTTGCTGTGGTGGCTCCTCGGGGGCCTCACTGACACTTAGCTAAGGGCCTGGGAGCAGAGACCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR TCA 72 bp | AAGCAGTGGGTTACAGCCCAGAGCCAGTGGCAGAGGTaGCGCCCAGGGAGGGACAGTCCTGGACTCCCGGTG | + |
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Preference number: 3 (lower is better) Translates to: KQWVTAQSQWQR*RPGRDSPGLPV Trigger: CACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCTGCCACTGGCTCTGGGCTGTAACCCACTGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | CTGAGGCGCTCACTAAGCACCCTGGAGCCACTTCCCTaGAGGTGCCAGGCCCCTTACACCAAGGTCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LRRSLSTLEPLP*RCQAPYTKVLP Trigger: GGGGAGGACCTTGGTGTAAGGGGCCTGGCACCTGCAGGGAAGTGGCTCCAGGGTGCTTAGTGAGCGCCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR TCA 72 bp | GGCCCAGGAGAGGGCAAGGAGAGGCTCCCTGCACAGTaGGCTGGATGCTACGAGCTGGGGGTAACTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: GPGEGKERLPAQ*AGCYELGVTSE Trigger: TTCAGAAGTTACCCCCAGCTCGTAGCATCCAGCTCACTGTGCAGGGAGCCTCTCCTTGCCCTCTCCTGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | CCCTGTCCTCCAGGAGAGTCCCAGGGAGGGCCTCCTTaGCAGGCAAGAACACGTGCTATAGGGACAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: PCPPGESQGGPP*QARTRAIGTEL Trigger: AAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGAGGACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | CCCCAAGGGAACCCTAGGTCACCAGCGGGCATCGGTTaGGAGAGCACTGCCCTCTACCTACCATCTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PQGNPRSPAGIG*ESTALYLPSFP Trigger: TGGGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACCTAGGGTTCCCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | CCAGTGGCAGAGGTGACGCCCAGGGAGGGACAGTCCTaGACTCCCGGTGGGCACACAAAGTGCTTACAATTC | + |
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Preference number: 3 (lower is better) Translates to: PVAEVTPREGQS*TPGGHTKCLQF Trigger: GAATTGTAAGCACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCTGCCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | GTGAGACCCCGACAGTGGTGTGAACACCTCTCTACCTaGAGCATTGGAGGAGCCTTGGGACTGGATGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VRPRQWCEHLST*SIGGALGLDGE Trigger: CTCCCCATCCAGTCCCAAGGCTCCTCCAATGCTGCAGGTAGAGAGGTGTTCACACCACTGTCGGGGTCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | AGCTCTGGAGCAGGGCAGAGGGGCCCTGTGCAAGTGTaGACTATCCTGCAGTTAATTGCTGCAGGTCGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SSGAGQRGPVQV*TILQLIAAGRV Trigger: GACACGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGGCCCCTCTGCCCTGCTCCAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | AAAGAAACCCAGGGATCCCCTAAGCTGTGGTCCAGGTaGCCTAGTACTTGTGTCCCTGGCCCTATGACCCTA | + |
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Preference number: 3 (lower is better) Translates to: KETQGSPKLWSR*PSTCVPGPMTL Trigger: TAGGGTCATAGGGCCAGGGACACAAGTACTAGGGCACCTGGACCACAGCTTAGGGGATCCCTGGGTTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | CAAAGTCACAAAGAAACCCAGGGATCCCCTAAGCTGTaGTCCAGGTGCCCTAGTACTTGTGTCCCTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QSHKETQGSPKL*SRCPSTCVPGP Trigger: AGGGCCAGGGACACAAGTACTAGGGCACCTGGACCACAGCTTAGGGGATCCCTGGGTTTCTTTGTGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | GTGGCAAGGCACTCCATAGCAGAGCGACAACTCTGGTaGCCCTGGGAGGCAGCTCTTTTTAAGGTTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VARHSIAERQLW*PWEAALFKVQR Trigger: TCTCTGAACCTTAAAAAGAGCTGCCTCCCAGGGCCACCAGAGTTGTCGCTCTGCTATGGAGTGCCTTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | GGTGACGCCCAGGGAGGGACAGTCCTGGACTCCCGGTaGGCACACAAAGTGCTTACAATTCTTACTATCCTT | + |
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Preference number: 3 (lower is better) Translates to: GDAQGGTVLDSR*AHKVLTILTIL Trigger: AAGGATAGTAAGAATTGTAAGCACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR GCA 72 bp | CCCTGTGCAAGTGTGCACTATCCTGCAGTTAATTGCTaGAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: PCASVHYPAVNC*RSCPSSGKPPS Trigger: GCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR TCA 72 bp | ACAGTGAGCTGGATGCTACGAGCTGGGGGTAACTTCTaGAGGCTGATTCATGATGGTGGTCACCACCACCTT | + |
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Preference number: 3 (lower is better) Translates to: TVSWMLRAGGNF*RLIHDGGHHHL Trigger: AAGGTGGTGGTGACCACCATCATGAATCAGCCTTCAGAAGTTACCCCCAGCTCGTAGCATCCAGCTCACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | TTGCCAGGCAAGAACACGTGCTATAGGGACAGAGCTTaGACTCACACTGTGACAGTCCACCAGCTCAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LPGKNTCYRDRA*THTVTVHQLSL Trigger: AAGACTGAGCTGGTGGACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR CCA 72 bp | CCCAGAGTCAGGTGCCCAGCAGAGCATTCTAGAACATaGCTTTCAAAACAGGAGGAAATTAAGGCAGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: PRVRCPAEHSRT*LSKQEEIKAAP Trigger: GGGGGCTGCCTTAATTTCCTCCTGTTTTGAAAGCCATGTTCTAGAATGCTCTGCTGGGCACCTGACTCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTGAGCCTCATCTGCCCTaGAGTTCACTAGAAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQLIAAGRVLPLESLLACEPHLP*SSLEKG Trigger: GCCTTTTTCTAGTGAACTCAAGGGCAGATGAGGCTC...ACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR TCA 72 bp | CCACCGGTTACAAGGGGGTCTCAGCTCCCAAACTCATaGAACCACTCAAAGTCACAAAGAAACCCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PPVTRGSQLPNS*NHSKSQRNPGI Trigger: GATCCCTGGGTTTCTTTGTGACTTTGAGTGGTTTCATGAGTTTGGGAGCTGAGACCCCCTTGTAACCGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR CCA 72 bp | AGGCACTCCATAGCAGAGCGACAACTCTGGTGGCCCTaGGAGGCAGCTCTTTTTAAGGTTCAGAGAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RHSIAERQLWWP*EAALFKVQRKE Trigger: TTCTTTTCTCTGAACCTTAAAAAGAGCTGCCTCCCAGGGCCACCAGAGTTGTCGCTCTGCTATGGAGTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR TCA 72 bp | GCTGGATGCTACGAGCTGGGGGTAACTTCTGAAGGCTaGTTCATGATGGTGGTCACCACCACCTTATTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: AGCYELGVTSEG*FMMVVTTTLFS Trigger: ACTAAATAAGGTGGTGGTGACCACCATCATGAATCAGCCTTCAGAAGTTACCCCCAGCTCGTAGCATCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR TCA 72 bp | GACAAAAATAAATATACAAATCTGCCCAGCCACTGGTaGCTGAGTGCCGCCTTCCTAAGGCAGGCAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DKNKYTNLPSHW*LSAAFLRQAGS Trigger: ACTGCCTGCCTGCCTTAGGAAGGCGGCACTCAGTCACCAGTGGCTGGGCAGATTTGTATATTTATTTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCTCTCTACCTGCAGCATaGGAGGAGCCTTGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPSLPAA*EEPWDW Trigger: CCAGTCCCAAGGCTCCTCCAATGCTGCAGGTAGAGA...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR TCA 72 bp | ACACGTGCTATAGGGACAGAGCTTGGACTCACACTGTaGCAGTCCACCAGCTCAGTCTTAGTACTTAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRAIGTELGLTL*QSTSSVLVLNS Trigger: GGAATTAAGTACTAAGACTGAGCTGGTGGACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATAGCACGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR GCA 72 bp | CACTTCACTCTAGCCTTTGTTTTCCCTGATTCCCAGTaGTCCAAGCCAGGCCACTTTCTTACCATTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HFTLAFVFPDSQ*SKPGHFLTITG Trigger: TCCTGTAATGGTAAGAAAGTGGCCTGGCTTGGAGCACTGGGAATCAGGGAAAACAAAGGCTAGAGTGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCAGCATTGGAGGAGCCTaGGGACTGGATGGGGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPSIGGA*GLDGEF Trigger: AAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGCT...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR TCA 72 bp | TCATCTGCCCTTGAGTTCACTAGAAAAAGGCAACTCTaGACTTTGGCTTTGTCTATAACAAAAAGTCCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSALEFTRKRQL*TLALSITKSPN Trigger: ATTAGGACTTTTTGTTATAGACAAAGCCAAAGTTCAGAGTTGCCTTTTTCTAGTGAACTCAAGGGCAGATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGCTCCCTGTCCTCCAGGAGAGTCCCAGGGAGGGCCTCCTTGCCAGGCACTCGGCCTCCACGTGTaGCAGCAGGTAGAAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SFAPCPPGESQGGPPCQALGLHV*QQVEAA Trigger: CGCCGCTTCTACCTGCTGGCACACGTGGAGGCCGAG...TGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGAGGACAGGGAGCAAAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGCGCTCACTAAGCACCCTGGAGCCACTTCCCTGCAGGTGCCAGGCCCCCCAGGACGGCCAGGCTaGCCCCAACGTGTACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TEALTKHPGATSLQVPGPPGRPG*PQRVPD Trigger: ATCAGGTACACGTTGGGGGCAGCCTGGCCGTCCTGG...GGGGCCTGGCACCTGCAGGGAAGTGGCTCCAGGGTGCTTAGTGAGCGCCTCAGT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | CAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCCAGAGTCGGCTCTCGCGCAGCTaGCCCGCGAACATGGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QRASVGRALPSTYHLSQSRLSRS*PANMAR Trigger: CCGCGCCATGTTCGCGGGCCAGCTGCGCGAGAGCCG...ACTCTGGGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCGCTCACTAAGCACCCTGGAGCCACTTCCCTGCAGGTGCCAGGCCCCCCCAGTTCGCCCACGTaGCGCAGGATGAAGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEALTKHPGATSLQVPGPPSSPT*RRMKRC Trigger: GCAACGCTTCATCCTGCGCCACGTGGGCGAACTGGG...GGGGCCTGGCACCTGCAGGGAAGTGGCTCCAGGGTGCTTAGTGAGCGCCTCAGT 66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR TCA 90 bp | GGTCACCAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCCCAGCCCCGAGCAGCTaGAGGCCTCGGCGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHQRASVGRALPSTYHLSPAPSS*RPRRSP Trigger: AGGACTTCGCCGAGGCCTTCAGCTGCTCGGGGCTGG...GGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGCTCCCTGTCCTCCAGGAGAGTCCCAGGGAGGGCCTCCTTGCCAGGCAGCCTCGGCGAAGTCCTaGATGTCCAGGCAGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFAPCPPGESQGGPPCQAASAKS*MSRQLA Trigger: GGCCAACTGCCTGGACATGCAGGACTTCGCCGAGGC...TGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGAGGACAGGGAGCAAAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GGTCACCAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCAGGCCGCCTCCTCCTTaGGCACGCACAGCCCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GHQRASVGRALPSTYHLSRPPPP*ARTARR Trigger: ACGACGGGCTGTGCGTGCCCAAGGAGGAGGCGGCCT...GGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCCTTGCCAGGCAAGAACACGTGCTATAGGGACAGAGCTTGGACTCACATCTCGGCCAGGCCGGTaGACGGGCGCGGACGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GPPCQARTRAIGTELGLTSRPGR*TGADAC Trigger: GCATGCGTCCGCGCCCGTCCACCGGCCTGGCCGAGA...TGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGGCAAGGAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | AGCTTTGCTCCCTGTCCTCCAGGAGAGTCCCAGGGAGGGCCTCCTTGCCAGGCACCTCCCAGGAGTCGGTaGCATGGTCATAGCGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFAPCPPGESQGGPPCQAPPRSR*HGHSAP Trigger: CGGAGCGCTATGACCATGCCACCGACTCCTGGGAGG...TGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGAGGACAGGGAGCAAAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGACGCCCAGGGAGGGACAGTCCTGGACTCCCGGTGGGCACACAAAGTGCTCTGCCGGTGTAGCTaGAGTCCAGGAGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGDAQGGTVLDSRWAHKVLCRCS*SPGAAA Trigger: TGCAGCTGCTCCTGGACTTCAGCTACACCGGCAGAG...CACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGGGCCCTGTGCAAGTGTGCACTATCCTGCAGTTAATTGCTGCAGGTCGGCCAGGTCGAGCTGCTaGTGCAGGAAGGCGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AEGPCASVHYPAVNCCRSARSSC*CRKAPH Trigger: GTGCGGCGCCTTCCTGCAGCAGCAGCTCGACCTGGC...CGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGGCCCCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGCTCCCTGTCCTCCAGGAGAGTCCCAGGGAGGGCCTCCTTGCCAGGCAGGTCTCTGGGTCATATaGCTCCACCACGTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFAPCPPGESQGGPPCQAGLWVI*LHHVRE Trigger: CTCTCGGACGTGGTGGAGGCATATGACCCAGAGACC...TGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGAGGACAGGGAGCAAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR TCA 90 bp | TTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCCCAACGCTCGGCGCGCAGTTaGCTGAGGCCGCGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIAAGRVLPLESLLACPQRSARS*LRPRNR Trigger: CCTGTTGCGCGGCCTCAGTCAACTGCGCGCCGAGCG...TTGGGGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | GGTCACCAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCGGAAGATGCTCACGCTaGCGTGCCAGAAGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHQRASVGRALPSTYHLSGRCSR*RARRWA Trigger: AGCCCACCTTCTGGCACGGCAGCGTGAGCATCTTCC...GGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTGGTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR CAA 72 bp | TCCCTGTCCTCCAGGAGAGTCCCAGGGAGGGCCTCCTaGCCAGGCAAGAACACGTGCTATAGGGACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRRVPGRAS*PGKNTCYRDRA Trigger: AGCTCTGTCCCTATAGCACGTGTTCTTGCCTGGCAAGGAGGCCCTCCCTGGGACTCTCCTGGAGGACAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGCAAGAACACGTGCTATAGGGACAGAGCTTGGACTCACACTGTGACAGTCCCACGTGGCGCAGGATaGAGCGTTGCGCAGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PGKNTCYRDRAWTHTVTVPRGAG*SVAQRS Trigger: CGAGCGCTGCGCAACGCTTCATCCTGCGCCACGTGG...GACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTGGAGGAGCCTTGGGACTGGATGGGGAGTTTAGCACTTCACTCTAGCGGTACTCTCGGGCCTTaGGCATGGGTGCCACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AALEEPWDWMGSLALHSSGTLGP*AWVPPP Trigger: CGGAGGTGGCACCCATGCTCAAGGCCCGAGAGTACC...GCTAGAGTGAAGTGCTAAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGCAAGAACACGTGCTATAGGGACAGAGCTTGGACTCACACTGTGACAGTCGGCAGCCTCTCCAGTTaGTCGGCGCCCAGTTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNTCYRDRAWTHTVTVGSLSS*SAPSSP Trigger: GGGCGAACTGGGCGCCGAGCAACTGGAGAGGCTGCC...GACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGGGCCCTGTGCAAGTGTGCACTATCCTGCAGTTAATTGCTGCAGGTCGCCATGGGGTAGGTCATaGGCTGCAGTGCCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGPCASVHYPAVNCCRSPWGRS*AAVPPR Trigger: CCTGGGAGGCACTGCAGCCCATGACCTACCCCATGG...CGACCTGCAGCAATTAACTGCAGGATAGTGCACACTTGCACAGGGCCCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCACTCCATAGCAGAGCGACAACTCTGGTGGCCCTGGGAGGCAGCTCTTTTCTCCTCGGGGTTCTGTaGCAGCCTGTGGTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KALHSRATTLVALGGSSFLLGVL*QPVVAC Trigger: GCAGGCTACCACAGGCTGCCACAGAACCCCGAGGAG...AAAAGAGCTGCCTCCCAGGGCCACCAGAGTTGTCGCTCTGCTATGGAGTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | GCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCAAGTCCAGGAGCAGCTaGAGCATGTCGGGCGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: AVNCCRSCPSSGKPPSLSKSRSS*SMSGGT Trigger: GGTGCCGCCCGACATGCTGCAGCTGCTCCTGGACTT...GGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGACGCCCAGGGAGGGACAGTCCTGGACTCCCGGTGGGCACACAAAGTGTCACGTAGATGTCGTTaGCCAGAGCCACGATACTAT | + |
|
Preference number: 4 (lower is better) Translates to: RGDAQGGTVLDSRWAHKVSRRCR*PEPRYY Trigger: ATAGTATCGTGGCTCTGGGCAACGACATCTACGTGA...CACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | AAATTAAGGCAGCCCCCTCTGCCAGCTGGACAAGAAGGCAGCAGTAGGCATGTGGGTCATAGCGCTCCGTaGTGTCGGCTGCCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRQPPLPAGQEGSSRHVGHSAP*CRLPPH Trigger: ATGTGGTGGCAGCCGACAGCACGGAGCGCTATGACC...CACATGCCTACTGCTGCCTTCTTGTCCAGCTGGCAGAGGGGGCTGCCTTAATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | GCAGCATTGGAGGAGCCTTGGGACTGGATGGGGAGTTTAGCACTTCACTCTAGCATGCTCACGCTGCCGTaGCAGAAGGTGGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AALEEPWDWMGSLALHSSMLTLP*QKVGSG Trigger: TCCAGAGCCCACCTTCTGGCACGGCAGCGTGAGCAT...GCTAGAGTGAAGTGCTAAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | AAATTAAGGCAGCCCCCTCTGCCAGCTGGACAAGAAGGCAGCAGTAGGCATGTGGCATGTCCAGGCAGTTaGCCAGGTCGAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRQPPLPAGQEGSSRHVACPGS*PGRAAA Trigger: AGCAGCAGCTCGACCTGGCCAACTGCCTGGACATGC...CACATGCCTACTGCTGCCTTCTTGTCCAGCTGGCAGAGGGGGCTGCCTTAATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | CAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCCAGAGTGTCTGTGGCATGAACTaGCGGAAGATGCTCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRASVGRALPSTYHLSQSVCGMN*RKMLTL Trigger: CAGCGTGAGCATCTTCCGCCAGTTCATGCCACAGAC...ACTCTGGGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR TCA 90 bp | GCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCCCGGTGTCTGTGGCATaGACTGGCGGAAGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVNCCRSCPSSGKPPSLSPVSVA*TGGRCS Trigger: TGAGCATCTTCCGCCAGTTCATGCCACAGACACCGG...GGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| 3UTR CAA 72 bp | CCCGACAGTGGTGTGAACACCTCTCTACCTGCAGCATaGGAGGAGCCTTGGGACTGGATGGGGAGTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVNTSLPAA*EEPWDWMGSLA Trigger: TGCTAAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGCTGCAGGTAGAGAGGTGTTCACACCACTGTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCAGCACTGTATCACCATaGTCTCCTTGCCTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVNCCRSCPSSGKPPSLSSTVSP*SPCLPG Trigger: CCCTGGCAGGCAAGGAGACCATGGTGATACAGTGCT...GGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | ACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATGAAACAAGCCTAACCCTACCAGAAGGTGGGCTCTaGAAGCCGCCCCACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: TRWKDGLVAPENETSLTLPEGGL*KPPHHT Trigger: AGTGTGGTGGGGCGGCTTCCAGAGCCCACCTTCTGG...TAGGGTTAGGCTTGTTTCATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCGCAGCGCGCCACCAGTaGCTCGGCCTCCACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPAARHQ*LGLHVC Trigger: GCACACGTGGAGGCCGAGCCACTGGTGGCGCGCTGC...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCCAGGCGCAGGCAAGGTaGGCAGCGCGCCACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPQAQAR*AARHQW Trigger: CCACTGGTGGCGCGCTGCCCACCTTGCCTGCGCCTG...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAGAAAAGAAAGCACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATCTGCCAGGGAGCCAATaGCATAGAGTCGGCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQRKESTRWKDGLVAPENLPGSQ*HRVGLG Trigger: GCCGAGGCCGACTCTATGCCATTGGCTCCCTGGCAG...ATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGTGCTTTCTTTTCTCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | ACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATGAAACAAGCCTAACCCTATCACATCCAGGAACTTaGGCTCGGCGCGCAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRWKDGLVAPENETSLTLSHPGT*ARRAVD Trigger: GTCAACTGCGCGCCGAGCGCAAGTTCCTGGATGTGA...TAGGGTTAGGCTTGTTTCATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCAGGTCGAGCTGCTGCTaGAGGAAGGCGCCGCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPRSSCC*RKAPHA Trigger: GGCGTGCGGCGCCTTCCTGCAGCAGCAGCTCGACCT...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAGAAAAGAAAGCACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATCGCAAAGGACCACGGTaGGAGCTGGCCACAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQRKESTRWKDGLVAPENRKGPR*ELATVH Trigger: GTGAACTGTGGCCAGCTCCCACCGTGGTCCTTTGCG...ATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGTGCTTTCTTTTCTCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCAGGCAGTCTTCCTAAGTCTCTCAAGTCATAAATATAAGAAAAATCCCTTGGCCAGGTCGAGCTaGTGCTGCAGGAAGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRQAVFLSLSSHKYKKNPLARSS*CCRKAP Trigger: CGGCGCCTTCCTGCAGCAGCAGCTCGACCTGGCCAA...GGGATTTTTCTTATATTTATGACTTGAGAGACTTAGGAAGACTGCCTGCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCCTTGCCAGGCAAGAACACGTGCTATAGGGACAGAGCTTGGACTCACATACCTGATTCATGGATaGGATCTTGTCCCATTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPPCQARTRAIGTELGLTYLIHG*DLVPFV Trigger: GACGAATGGGACAAGATCCCATCCATGAATCAGGTA...TGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGGCAAGGAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAGAAAAGAAAGCACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATCCCTGCCGGTGTCTGTaGCATGAACTGGCGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQRKESTRWKDGLVAPENPCRCL*HELAED Trigger: ATCTTCCGCCAGTTCATGCCACAGACACCGGCAGGG...ATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGTGCTTTCTTTTCTCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGCAAGAACACGTGCTATAGGGACAGAGCTTGGACTCACACTGTGACAGTCCCACAGATCAGTGTCTaGGTCATAGCACTGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGKNTCYRDRAWTHTVTVPQISV*VIALYH Trigger: GTGATACAGTGCTATGACCCAGACACTGATCTGTGG...GACTGTCACAGTGTGAGTCCAAGCTCTGTCCCTATAGCACGTGTTCTTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CCA 90 bp | TTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCCCCAACGTGTACCTGATTCATaGATGGGATCTTGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LIAAGRVLPLESLLACPQRVPDS*MGSCPI Trigger: AATGGGACAAGATCCCATCCATGAATCAGGTACACG...TTGGGGACAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 90 bp | CCGCGCGCACCCAGCGCAGCGCCAGCTGGTAGGCCGCCTCCTCCTTaGGCACGCACAGCCCGTCGTCGCGCAGGTAGCGCAGCAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRAPSAAPAGRPPPP*ARTARRRAGSAAGA Trigger: CGCGCCTGCTGCGCTACCTGCGCGACGACGGGCTGTGCGTGCCCAAGGAGGAGGCGGCCTACCAGCTGGCGCTGCGCTGGGTGCGCGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 90 bp | CCTGGTCACAACCTCCCACCAGCACCAGGATCTCGGCCAGGCCGGTaGACGGGCGCGGACGCATGCGGGGGCAGGGCCCGCGGTCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGHNLPPAPGSRPGR*TGADACGGRARGRA Trigger: GGCACGACCGCGGGCCCTGCCCCCGCATGCGTCCGCGCCCGTCCACCGGCCTGGCCGAGATCCTGGTGCTGGTGGGAGGTTGTGACCAGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 90 bp | AGCCGCCTGGAAGTCGCGGGCCTCGCGCAGCAGGCGCAGGCAAGGTaGGCAGCGCGCCACCAGTGGCTCGGCCTCCACGTGTGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRLEVAGLAQQAQAR*AARHQWLGLHVCQQ Trigger: CTGCTGGCACACGTGGAGGCCGAGCCACTGGTGGCGCGCTGCCCACCTTGCCTGCGCCTGCTGCGCGAGGCCCGCGACTTCCAGGCGGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 90 bp | CAGGCAAGGTGGGCAGCGCGCCACCAGTGGCTCGGCCTCCACGTGTaGCAGCAGGTAGAAGCGGCGCACGAAGGGCAGGCGCACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QARWAARHQWLGLHV*QQVEAAHEGQAHSL Trigger: GAGGCTGTGCGCCTGCCCTTCGTGCGCCGCTTCTACCTGCTGGCACACGTGGAGGCCGAGCCACTGGTGGCGCGCTGCCCACCTTGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 90 bp | GCGGCTCGGCGTTGTCGCCGCTCACCGCCACTCTGCCGGTGTAGCTaGAGTCCAGGAGCAGCTGCAGCATGTCGGGCGGCACCCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AARRCRRSPPLCRCS*SPGAAAACRAAPRA Trigger: TGCACGGGGTGCCGCCCGACATGCTGCAGCTGCTCCTGGACTTCAGCTACACCGGCAGAGTGGCGGTGAGCGGCGACAACGCCGAGCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 90 bp | AGTTGCTCGGCGCCCAGTTCGCCCACGTGGCGCAGGATGAAGCGTTaGGCAGCGCTCGCCAGCCCCGAGCAGCTGAAGGCCTCGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCSAPSSPTWRRMKR*AALASPEQLKASAK Trigger: CTTCGCCGAGGCCTTCAGCTGCTCGGGGCTGGCGAGCGCTGCGCAACGCTTCATCCTGCGCCACGTGGGCGAACTGGGCGCCGAGCAACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 90 bp | GCCGCCTCCAGGGTCACATCCAGGAACTTGCGCTCGGCGCGCAGTTaGCTGAGGCCGCGCAACAGGCTTAGGGCGTGCGCGGGATCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AASRVTSRNLRSARS*LRPRNRLRACAGSE Trigger: CTCCGATCCCGCGCACGCCCTAAGCCTGTTGCGCGGCCTCAGTCAACTGCGCGCCGAGCGCAAGTTCCTGGATGTGACCCTGGAGGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGACGCCCAGGGAGGGACAGTCCTGGACTCCCGGTGGGCACACAAAGTGGCGCTCGGCGCGCAGTaGACTGAGGCCGCGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGDAQGGTVLDSRWAHKVALGAQ*TEAAQQ Trigger: CTGTTGCGCGGCCTCAGTCAACTGCGCGCCGAGCGC...CACTTTGTGTGCCCACCGGGAGTCCAGGACTGTCCCTCCCTGGGCGTCACCTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 90 bp | CCTCCAGGGTCACATCCAGGAACTTGCGCTCGGCGCGCAGTTGACTaGGGCCGCGCAACAGGCTTAGGGCGTGCGCGGGATCGGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGSHPGTCARRAVD*GRATGLGRARDRRR Trigger: CCTTCTCCGATCCCGCGCACGCCCTAAGCCTGTTGCGCGGCCTCAGTCAACTGCGCGCCGAGCGCAAGTTCCTGGATGTGACCCTGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 90 bp | GCCGGTGTCTGTGGCATGAACTGGCGGAAGATGCTCACGCTGCCGTaGCAGAAGGTGGGCTCTGGAAGCCGCCCCACCACACTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGVCGMNWRKMLTLP*QKVGSGSRPTTLQA Trigger: GGCCTGGAGTGTGGTGGGGCGGCTTCCAGAGCCCACCTTCTGGCACGGCAGCGTGAGCATCTTCCGCCAGTTCATGCCACAGACACCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 90 bp | GAACTGGCGGAAGATGCTCACGCTGCCGTGCCAGAAGGTGGGCTCTaGAAGCCGCCCCACCACACTCCAGGCCCGGGTCTCTGGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: ELAEDAHAAVPEGGL*KPPHHTPGPGLWVI Trigger: TATGACCCAGAGACCCGGGCCTGGAGTGTGGTGGGGCGGCTTCCAGAGCCCACCTTCTGGCACGGCAGCGTGAGCATCTTCCGCCAGTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CAA 90 bp | CAGCGGGCATCGGTTGGGAGAGCACTGCCCTCTACCTACCATCTTTCCCAGAGTAGCAGCGGCTCGGCGTaGTCGCCGCTCACCGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QRASVGRALPSTYHLSQSSSGSA*SPLTAT Trigger: AGTGGCGGTGAGCGGCGACAACGCCGAGCCGCTGCT...ACTCTGGGAAAGATGGTAGGTAGAGGGCAGTGCTCTCCCAACCGATGCCCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 90 bp | GCTGCAGTGCCTCCCAGGAGTCGGTGGCATGGTCATAGCGCTCCGTaGTGTCGGCTGCCACCACATACAGAAGGCCGTCTAGCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVPPRSRWHGHSAP*CRLPPHTEGRLALR Trigger: CCTCAGTGCTAGACGGCCTTCTGTATGTGGTGGCAGCCGACAGCACGGAGCGCTATGACCATGCCACCGACTCCTGGGAGGCACTGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CCA 90 bp | GGTGGGCTCTGGAAGCCGCCCCACCACACTCCAGGCCCGGGTCTCTaGGTCATATGCCTCCACCACGTCCGAGAGTTCAAAGGTGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGLWKPPHHTPGPGL*VICLHHVREFKGVV Trigger: GACAACACCTTTGAACTCTCGGACGTGGTGGAGGCATATGACCCAGAGACCCGGGCCTGGAGTGTGGTGGGGCGGCTTCCAGAGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTGGAGGAGCCTTGGGACTGGATGGGGAGTTTAGCACTTCACTCTAGCGCGCAGGATGAAGCGTaGCGCAGCGCTCGCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AALEEPWDWMGSLALHSSAQDEA*RSARQP Trigger: GGGCTGGCGAGCGCTGCGCAACGCTTCATCCTGCGC...GCTAGAGTGAAGTGCTAAACTCCCCATCCAGTCCCAAGGCTCCTCCAATGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 90 bp | CGGTGGGAGCTGGCCACAGTTCACCAGCGACCACAGATCAGTGTCTaGGTCATAGCACTGTATCACCATGGTCTCCTTGCCTGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RWELATVHQRPQISV*VIALYHHGLLACQG Trigger: TCCCTGGCAGGCAAGGAGACCATGGTGATACAGTGCTATGACCCAGACACTGATCTGTGGTCGCTGGTGAACTGTGGCCAGCTCCCACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 90 bp | ACAGAAGGCCGTCTAGCACTGAGGAGCTGTGGTACTCTCGGGCCTTaGGCATGGGTGCCACCTCCGTCCACTCGTTCACACTCGAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: TEGRLALRSCGTLGP*AWVPPPSTRSHSNC Trigger: ACAATTCGAGTGTGAACGAGTGGACGGAGGTGGCACCCATGCTCAAGGCCCGAGAGTACCACAGCTCCTCAGTGCTAGACGGCCTTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 90 bp | ATCAGTGTCTGGGTCATAGCACTGTATCACCATGGTCTCCTTGCCTaGCAGGGAGCCAATGGCATAGAGTCGGCCTCGGCAGGCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISVWVIALYHHGLLA*QGANGIESASAGSG Trigger: ACCACTGCCTGCCGAGGCCGACTCTATGCCATTGGCTCCCTGGCAGGCAAGGAGACCATGGTGATACAGTGCTATGACCCAGACACTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 90 bp | ACAGATCAGTGTCTGGGTCATAGCACTGTATCACCATGGTCTCCTTaGCTGCCAGGGAGCCAATGGCATAGAGTCGGCCTCGGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TDQCLGHSTVSPWSP*LPGSQWHRVGLGRQ Trigger: CTGCCTGCCGAGGCCGACTCTATGCCATTGGCTCCCTGGCAGGCAAGGAGACCATGGTGATACAGTGCTATGACCCAGACACTGATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGGCGCTCACTAAGCACCCTGGAGCCACTTCCCTGCAGGTGCCAGGCCCCTTCATGGATGGGATCTaGTCCCATTCGTCTTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TEALTKHPGATSLQVPGPFMDGI*SHSSLV Trigger: CACTAAAGACGAATGGGACAAGATCCCATCCATGAA...GGGGCCTGGCACCTGCAGGGAAGTGGCTCCAGGGTGCTTAGTGAGCGCCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CCA 90 bp | CATGAGTCCATTCAAAGTCACAGTCTTGGGCGCAAAGGACCACGGTaGGAGCTGGCCACAGTTCACCAGCGACCACAGATCAGTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HESIQSHSLGRKGPR*ELATVHQRPQISVW Trigger: CCAGACACTGATCTGTGGTCGCTGGTGAACTGTGGCCAGCTCCCACCGTGGTCCTTTGCGCCCAAGACTGTGACTTTGAATGGACTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS-3UTR CAA 90 bp | AAGGCACTCCATAGCAGAGCGACAACTCTGGTGGCCCTGGGAGGCAGCTCTTTTCCTGCATCCACGTCATaGCTACCACTGTTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KALHSRATTLVALGGSSFPASTS*LPLFSS Trigger: CGAGCTGAACAGTGGTAGCAATGACGTGGATGCAGG...AAAAGAGCTGCCTCCCAGGGCCACCAGAGTTGTCGCTCTGCTATGGAGTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS-3UTR CAA 90 bp | GTTCAGAGAAAAGAAAGCACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATTGCATGTCCAGGCAGTaGGCCAGGTCGAGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VQRKESTRWKDGLVAPENCMSRQ*ARSSCC Trigger: GCAGCAGCTCGACCTGGCCAACTGCCTGGACATGCA...ATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGTGCTTTCTTTTCTCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS-3UTR CAA 90 bp | ACTCGCTGGAAGGATGGGTTGGTGGCACCAGAAAATGAAACAAGCCTAACCCTAATCACCATGGTCTCCTaGCCTGCCAGGGAGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TRWKDGLVAPENETSLTLITMVS*PAREPM Trigger: CATTGGCTCCCTGGCAGGCAAGGAGACCATGGTGAT...TAGGGTTAGGCTTGTTTCATTTTCTGGTGCCACCAACCCATCCTTCCAGCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS-3UTR CAA 90 bp | CCTGCAGTTAATTGCTGCAGGTCGTGTCCTTCCTCTGGAAAGCCTCCTAGCCTGTCGTTCACACTCGAATaGTATCTCCACACGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAVNCCRSCPSSGKPPSLSFTLE*YLHTQS Trigger: TGACTGCGTGTGGAGATACAATTCGAGTGTGAACGA...CAGGCTAGGAGGCTTTCCAGAGGAAGGACACGACCTGCAGCAATTAACTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 72 bp | TCCAGGAGCAGCTGCAGCATGTCGGGCGGCACCCCGTaGAGGCGCACGCGCTCGGCGCGGCTCTCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSCSMSGGTP*RRTRSARLSRS Trigger: GCTGCGCGAGAGCCGCGCCGAGCGCGTGCGCCTGCACGGGGTGCCGCCCGACATGCTGCAGCTGCTCCTGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CCA 72 bp | GAAGTCGCGGGCCTCGCGCAGCAGGCGCAGGCAAGGTaGGCAGCGCGCCACCAGTGGCTCGGCCTCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: EVAGLAQQAQAR*AARHQWLGLHV Trigger: CACGTGGAGGCCGAGCCACTGGTGGCGCGCTGCCCACCTTGCCTGCGCCTGCTGCGCGAGGCCCGCGACTTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CCA 72 bp | CCCAGCGCAGCGCCAGCTGGTAGGCCGCCTCCTCCTTaGGCACGCACAGCCCGTCGTCGCGCAGGTAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSAAPAGRPPPP*ARTARRRAGSA Trigger: TGCGCTACCTGCGCGACGACGGGCTGTGCGTGCCCAAGGAGGAGGCGGCCTACCAGCTGGCGCTGCGCTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS TCA 72 bp | GTTGCTCGGCGCCCAGTTCGCCCACGTGGCGCAGGATaGAGCGTTGCGCAGCGCTCGCCAGCCCCGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VARRPVRPRGAG*SVAQRSPAPSS Trigger: GCTGCTCGGGGCTGGCGAGCGCTGCGCAACGCTTCATCCTGCGCCACGTGGGCGAACTGGGCGCCGAGCAAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 72 bp | TGGGCAGCGCGCCACCAGTGGCTCGGCCTCCACGTGTaGCAGCAGGTAGAAGCGGCGCACGAAGGGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: WAARHQWLGLHV*QQVEAAHEGQA Trigger: CGCCTGCCCTTCGTGCGCCGCTTCTACCTGCTGGCACACGTGGAGGCCGAGCCACTGGTGGCGCGCTGCCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CAA 72 bp | GGCGCCCAGTTCGCCCACGTGGCGCAGGATGAAGCGTaGCGCAGCGCTCGCCAGCCCCGAGCAGCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAQFAHVAQDEA*RSARQPRAAEG Trigger: GCCTTCAGCTGCTCGGGGCTGGCGAGCGCTGCGCAACGCTTCATCCTGCGCCACGTGGGCGAACTGGGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CAA 90 bp | CAGTTGCTCGGCGCCCAGTTCGCCCACGTGGCGCAGGATGAAGCGTaGCGCAGCGCTCGCCAGCCCCGAGCAGCTGAAGGCCTCGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLLGAQFAHVAQDEA*RSARQPRAAEGLGE Trigger: TTCGCCGAGGCCTTCAGCTGCTCGGGGCTGGCGAGCGCTGCGCAACGCTTCATCCTGCGCCACGTGGGCGAACTGGGCGCCGAGCAACTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CCA 72 bp | GAAGATGCTCACGCTGCCGTGCCAGAAGGTGGGCTCTaGAAGCCGCCCCACCACACTCCAGGCCCGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EDAHAAVPEGGL*KPPHHTPGPGL Trigger: GAGACCCGGGCCTGGAGTGTGGTGGGGCGGCTTCCAGAGCCCACCTTCTGGCACGGCAGCGTGAGCATCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 72 bp | AGGGTCACATCCAGGAACTTGCGCTCGGCGCGCAGTTaGCTGAGGCCGCGCAACAGGCTTAGGGCGTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVTSRNLRSARS*LRPRNRLRACA Trigger: CGCGCACGCCCTAAGCCTGTTGCGCGGCCTCAGTCAACTGCGCGCCGAGCGCAAGTTCCTGGATGTGACCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 72 bp | TCACATCCAGGAACTTGCGCTCGGCGCGCAGTTGACTaGGGCCGCGCAACAGGCTTAGGGCGTGCGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SHPGTCARRAVD*GRATGLGRARD Trigger: ATCCCGCGCACGCCCTAAGCCTGTTGCGCGGCCTCAGTCAACTGCGCGCCGAGCGCAAGTTCCTGGATGTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 72 bp | TGTGGCATGAACTGGCGGAAGATGCTCACGCTGCCGTaGCAGAAGGTGGGCTCTGGAAGCCGCCCCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: CGMNWRKMLTLP*QKVGSGSRPTT Trigger: TGTGGTGGGGCGGCTTCCAGAGCCCACCTTCTGGCACGGCAGCGTGAGCATCTTCCGCCAGTTCATGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 72 bp | CCTCCCAGGAGTCGGTGGCATGGTCATAGCGCTCCGTaGTGTCGGCTGCCACCACATACAGAAGGCCGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PPRSRWHGHSAP*CRLPPHTEGRL Trigger: TAGACGGCCTTCTGTATGTGGTGGCAGCCGACAGCACGGAGCGCTATGACCATGCCACCGACTCCTGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 72 bp | TGGAAGCCGCCCCACCACACTCCAGGCCCGGGTCTCTaGGTCATATGCCTCCACCACGTCCGAGAGTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: WKPPHHTPGPGL*VICLHHVREFK Trigger: TTTGAACTCTCGGACGTGGTGGAGGCATATGACCCAGAGACCCGGGCCTGGAGTGTGGTGGGGCGGCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS TCA 72 bp | CGTCTAGCACTGAGGAGCTGTGGTACTCTCGGGCCTTaGGCATGGGTGCCACCTCCGTCCACTCGTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLALRSCGTLGP*AWVPPPSTRSH Trigger: GTGTGAACGAGTGGACGGAGGTGGCACCCATGCTCAAGGCCCGAGAGTACCACAGCTCCTCAGTGCTAGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 72 bp | CCCCACCACACTCCAGGCCCGGGTCTCTGGGTCATATaGCTCCACCACGTCCGAGAGTTCAAAGGTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PHHTPGPGLWVI*LHHVREFKGVV Trigger: GACAACACCTTTGAACTCTCGGACGTGGTGGAGGCATATGACCCAGAGACCCGGGCCTGGAGTGTGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CAA 72 bp | CCGTCTAGCACTGAGGAGCTGTGGTACTCTCGGGCCTaGAGCATGGGTGCCACCTCCGTCCACTCGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: PSSTEELWYSRA*SMGATSVHSFT Trigger: TGTGAACGAGTGGACGGAGGTGGCACCCATGCTCAAGGCCCGAGAGTACCACAGCTCCTCAGTGCTAGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS GCA 72 bp | GGGAGCCATCAGACCCGCCCGTCACGTAGATGTCGTTaGCCAGAGCCACGATACTATAGCCCCCACCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSHQTRPSRRCR*PEPRYYSPHLS Trigger: ACTTAGGTGGGGGCTATAGTATCGTGGCTCTGGGCAACGACATCTACGTGACGGGCGGGTCTGATGGCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CCA 72 bp | GTCACAGTCTTGGGCGCAAAGGACCACGGTGGGAGCTaGCCACAGTTCACCAGCGACCACAGATCAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VTVLGAKDHGGS*PQFTSDHRSVS Trigger: AGACACTGATCTGTGGTCGCTGGTGAACTGTGGCCAGCTCCCACCGTGGTCCTTTGCGCCCAAGACTGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
||
| CDS CAA 90 bp | TACAGAAGGCCGTCTAGCACTGAGGAGCTGTGGTACTCTCGGGCCTaGAGCATGGGTGCCACCTCCGTCCACTCGTTCACACTCGAATTG | + |
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Preference number: 6 (lower is better) Translates to: YRRPSSTEELWYSRA*SMGATSVHSFTLEL Trigger: CAATTCGAGTGTGAACGAGTGGACGGAGGTGGCACCCATGCTCAAGGCCCGAGAGTACCACAGCTCCTCAGTGCTAGACGGCCTTCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS GCA 72 bp | TGGGTCATAGCACTGTATCACCATGGTCTCCTTGCCTaGCAGGGAGCCAATGGCATAGAGTCGGCCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: WVIALYHHGLLA*QGANGIESASA Trigger: TGCCGAGGCCGACTCTATGCCATTGGCTCCCTGGCAGGCAAGGAGACCATGGTGATACAGTGCTATGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS GCA 72 bp | TGTCTGGGTCATAGCACTGTATCACCATGGTCTCCTTaGCTGCCAGGGAGCCAATGGCATAGAGTCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: CLGHSTVSPWSP*LPGSQWHRVGL Trigger: GAGGCCGACTCTATGCCATTGGCTCCCTGGCAGGCAAGGAGACCATGGTGATACAGTGCTATGACCCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS GCA 72 bp | CAGAGACATAGAGTTTGCCTCCCAGGACGGCCAGGCTaGCCCCAACGTGTACCTGATTCATGGATGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: QRHRVCLPGRPG*PQRVPDSWMGS Trigger: AGATCCCATCCATGAATCAGGTACACGTTGGGGGCAGCCTGGCCGTCCTGGGAGGCAAACTCTATGTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CAA 90 bp | GAGTCATCCCTGACGAAGTACATGAGTCCATTCAAAGTCACAGTCTaGGGCGCAAAGGACCACGGTGGGAGCTGGCCACAGTTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ESSLTKYMSPFKVTV*GAKDHGGSWPQFTS Trigger: GCTGGTGAACTGTGGCCAGCTCCCACCGTGGTCCTTTGCGCCCAAGACTGTGACTTTGAATGGACTCATGTACTTCGTCAGGGATGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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| CDS CCA 72 bp | CTGGCCACAGTTCACCAGCGACCACAGATCAGTGTCTaGGTCATAGCACTGTATCACCATGGTCTCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LATVHQRPQISV*VIALYHHGLLA Trigger: GGCAAGGAGACCATGGTGATACAGTGCTATGACCCAGACACTGATCTGTGGTCGCTGGTGAACTGTGGCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097773.4 |
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