Pregenerated sensors for KLHL20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026705Ensembl transcript IDs: ENSMUST00000111611.8, ENSMUST00000117467.7, ENSMUST00000195584.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGAAGGCTGAGAGCCACCGTTGTTCATGGAATTACACACAGTTGTaGGCTGCCAGATATAAGTGCTGGGAACTGAACTCGGGTCCTCTG | + |
Preference number: 1 (lower is better) Translates to: RKAESHRCSWNYTQL*AARYKCWELNSGPL Trigger: CAGAGGACCCGAGTTCAGTTCCCAGCACTTATATCTGGCAGCTCACAACTGTGTGTAATTCCATGAACAACGGTGGCTCTCAGCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111611.8 |
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3UTR GCA 90 bp | AAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTaGAAAGGCGGCGTTTTGCAGGTGAGCTCCGTCCTTAGACGGGTA | + |
Preference number: 1 (lower is better) Translates to: KAKNKYSSAQSGKAL*KGGVLQVSSVLRRV Trigger: TACCCGTCTAAGGACGGAGCTCACCTGCAAAACGCCGCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR GCA 90 bp | AGAGACCTAGATACATGTGGCAGAAACTTCATCACTGGCAATCTCTaGAGATGTATAGATATGTCTAAAAGGAATAACATCAGGTCACAC | + |
Preference number: 1 (lower is better) Translates to: RDLDTCGRNFITGNL*RCIDMSKRNNIRSH Trigger: GTGTGACCTGATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTTTCTGCCACATGTATCTAGGTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195584.2 |
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3UTR-3UTR TCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGTTAGACGGGTATTTCTaGATGTTGAGGCACCGGCAA | + |
Preference number: 2 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSLDGYF*MLRHRQ Trigger: TTGCCGGTGCCTCAACATTCAGAAATACCCGTCTAA...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR CAA 90 bp | ATTAAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATaGTGCAAAGGCGGCGTTTTGCAGGTGAGCTCCGTCCTTAGACGG | + |
Preference number: 2 (lower is better) Translates to: IKAKNKYSSAQSGKA*CKGGVLQVSSVLRR Trigger: CCGTCTAAGGACGGAGCTCACCTGCAAAACGCCGCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR CAA 90 bp | GGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTaGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACATC | + |
Preference number: 2 (lower is better) Translates to: GVVLLNMYSNMKISP*VYIRVTSESPGQNI Trigger: GATGTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR-3UTR TCA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTAGACGGGTATTTCTaGATGTTGAGGCACCGGCAA | + |
Preference number: 2 (lower is better) Translates to: HFAGVVLLNMYSNMKISPLDGYF*MLRHRQ Trigger: TTGCCGGTGCCTCAACATTCAGAAATACCCGTCTAA...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR-3UTR GCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGATCACTGGCAATCTCTaGAGATGTATAGATATGTCT | + |
Preference number: 2 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWITGNL*RCIDMS Trigger: AGACATATCTATACATCTGCAGAGATTGCCAGTGAT...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR-3UTR GCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGATCACTGGCAATCTCTaGAGATGTATAGATATGTCT | + |
Preference number: 2 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSITGNL*RCIDMS Trigger: AGACATATCTATACATCTGCAGAGATTGCCAGTGAT...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR-3UTR CCA 90 bp | TCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCACCTTCACTTCATCACTaGCAATCTCTGCAGATGTAT | + |
Preference number: 2 (lower is better) Translates to: SNMKISPLVYIRVTSESPPSLHH*QSLQMY Trigger: ATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGG...TGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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3UTR-3UTR CCA 90 bp | GTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGTTTTACCTTCATCACTaGCAATCTCTGCAGATGTAT | + |
Preference number: 2 (lower is better) Translates to: VLLNMYSNMKISPLVYIRFYLHH*QSLQMY Trigger: ATACATCTGCAGAGATTGCCAGTGATGAAGGTAAAA...CCTTATATACACCAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111611.8 |
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3UTR GCA 72 bp | AATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTaGAAAGGCGGCGTTTTGCAGGTGAGCTCCGTCCTT | + |
Preference number: 3 (lower is better) Translates to: NKYSSAQSGKAL*KGGVLQVSSVL Trigger: AAGGACGGAGCTCACCTGCAAAACGCCGCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR TCA 72 bp | GAGAGCCACCGTTGTTCATGGAATTACACACAGTTGTaGGCTGCCAGATATAAGTGCTGGGAACTGAACTCG | + |
Preference number: 3 (lower is better) Translates to: ESHRCSWNYTQL*AARYKCWELNS Trigger: CGAGTTCAGTTCCCAGCACTTATATCTGGCAGCTCACAACTGTGTGTAATTCCATGAACAACGGTGGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111611.8 |
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3UTR GCA 72 bp | AGTGAAAATCAGAATTCACGGCTGGAGAAAGTTCACTaGTCCTTGGTGGCCAAGAGGAGACAGGAAAGAAAG | + |
Preference number: 3 (lower is better) Translates to: SENQNSRLEKVH*SLVAKRRQERK Trigger: CTTTCTTTCCTGTCTCCTCTTGGCCACCAAGGAGCAGTGAACTTTCTCCAGCCGTGAATTCTGATTTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR CCA 72 bp | AACATCCAGTGTAAAGTGAAAATCAGAATTCACGGCTaGAGAAAGTTCACTGCTCCTTGGTGGCCAAGAGGA | + |
Preference number: 3 (lower is better) Translates to: NIQCKVKIRIHG*RKFTAPWWPRG Trigger: TCCTCTTGGCCACCAAGGAGCAGTGAACTTTCTCCAGCCGTGAATTCTGATTTTCACTTTACACTGGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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3UTR GCA 72 bp | AGCCACACTCGCCTTCACTTCATCACTGGCAATCTCTaGAGATGTATAGATATGTCTAAAAGGAATAACATC | + |
Preference number: 3 (lower is better) Translates to: SHTRLHFITGNL*RCIDMSKRNNI Trigger: GATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGGCGAGTGTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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3UTR GCA 72 bp | GATACATGTGGCAGAAACTTCATCACTGGCAATCTCTaGAGATGTATAGATATGTCTAAAAGGAATAACATC | + |
Preference number: 3 (lower is better) Translates to: DTCGRNFITGNL*RCIDMSKRNNI Trigger: GATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTTTCTGCCACATGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195584.2 |
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CDS-3UTR TCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTGTAGGGGCTGCAGGCTaGCAGGATGACGCGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRVGAAG*QDDAVG Trigger: GCCCACCGCGTCATCCTGTCAGCCTGCAGCCCCTAC...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTGGTCAGAGCCTACGGTaGCCACCAGGAACTTGGGAC | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRGQSLR*PPGTWD Trigger: GTCCCAAGTTCCTGGTGGGCACCGTAGGCTCTGACC...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTTGCAGGCTGACAGGATaGCGCGGTGGGCATATATCT | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRCRLTG*RGGHIS Trigger: AGATATATGCCCACCGCGTCATCCTGTCAGCCTGCA...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GGAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGGTCATCAAGAACACTaGCCCCGACTCCACATCGCC | + |
Preference number: 4 (lower is better) Translates to: GKKAAGGDSRHNSSTATLGHQEH*PRLHIA Trigger: GGCGATGTGGAGTCGGGGTCAGTGTTCTTGATGACC...GAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGCCGAGGGTGCTTGTCTaGAATATAGGGCATGCGAGC | + |
Preference number: 4 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSPRVLV*NIGHAS Trigger: GCTCGCATGCCCTATATTTCAGACAAGCACCCTCGG...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | CAGTGGCCTTCTGAGATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCTGGGGTCTCCAAGGGTaGAGCGGCTTGTTACATCCA | + |
Preference number: 4 (lower is better) Translates to: QWPSEMKSDTQRKDPSSVWGLQG*SGLLHP Trigger: TGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCA...GACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCATCTCAGAAGGCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTCTCCCCTGTAAACATTaGTCGGAAGTAGGGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRLPCKH*SEVGAA Trigger: TGCAGCCCCTACTTCCGAGCAATGTTTACAGGGGAG...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTATCACTACTTCTGTCTaGCGGCTTTCTGCCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRITTSV*RLSASS Trigger: GGAGCTGGCAGAAAGCCGGCAGACAGAAGTAGTGAT...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTTCGGATAGGTTTCCGTaGTCTTGTCCTTGGCCCTTG | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRSDRFP*SCPWPL Trigger: CAAGGGCCAAGGACAAGACCACGGAAACCTATCCGA...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GGAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGCAGGCAAGAGAGTCTaGACATTGCCCTCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: GKKAAGGDSRHNSSTATLAGKRV*TLPSST Trigger: TGTGGAAGAGGGCAATGTTCAGACTCTCTTGCCTGC...GAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGTGTCTGCCGGCTTTCTaGCAGCTCCCCTGTAAACAT | + |
Preference number: 4 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWCLPAF*QLPCKH Trigger: ATGTTTACAGGGGAGCTGGCAGAAAGCCGGCAGACA...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | CAGTGGCCTTCTGAGATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCTGTCTGCCGGCTTTCTaGCAGCTCCCCTGTAAACAT | + |
Preference number: 4 (lower is better) Translates to: QWPSEMKSDTQRKDPSSVCLPAF*QLPCKH Trigger: ATGTTTACAGGGGAGCTGGCAGAAAGCCGGCAGACA...GACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCATCTCAGAAGGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTGGCATGCGAGCAGGTTaGGGAACCCCTTCTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: HFAGVVLLNMYSNMKISPGMRAG*GTPSGS Trigger: GCTGCCAGAAGGGGTTCCCCAACCTGCTCGCATGCC...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGTCGGATAGGTTTCCGTaGTCTTGTCCTTGGCCCTTG | + |
Preference number: 4 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSSDRFP*SCPWPL Trigger: CAAGGGCCAAGGACAAGACCACGGAAACCTATCCGA...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGCCATTCGCCACTCATTaGTCTGGGGGTCATAGCGTT | + |
Preference number: 4 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSPFATH*SGGHSV Trigger: AACGCTATGACCCCCAGACCAATGAGTGGCGAATGG...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGTCGCCTTTTGCTCATTaGAGCTACCATTCGCCACTC | + |
Preference number: 4 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWSPFAH*SYHSPL Trigger: GAGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGA...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | GGAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGTCTCTCCCTCCCACTaGATAGATCATGTCCTGGTA | + |
Preference number: 4 (lower is better) Translates to: GKKAAGGDSRHNSSTATLVSPSH*IDHVLV Trigger: TACCAGGACATGATCTATGCAGTGGGAGGGAGAGAC...GAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGGACAGGATGACGCGGTaGGCATATATCTTCTTAGCG | + |
Preference number: 4 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWDRMTR*AYIFLA Trigger: CGCTAAGAAGATATATGCCCACCGCGTCATCCTGTC...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGGCTTTCTCAGAAGGTTaGTCACTTCCAAGGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSAFSEG*SLPRFA Trigger: GGCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGC...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GTTCTATTGTTTTCTCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATGTAGGGGCTGCAGGCTaGCAGGATGACGCGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: VLLFSPAVQSFEVKALPNVGAAG*QDDAVG Trigger: GCCCACCGCGTCATCCTGTCAGCCTGCAGCCCCTAC...ATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGAGAAAACAATAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGAGGCCATCACTGCATTaGACACTTGTTCTTCACTCC | + |
Preference number: 4 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSRPSLH*TLVLHS Trigger: GGAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCT...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | CAGTGGCCTTCTGAGATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCAGGCCATCACTGCATTaGACACTTGTTCTTCACTCC | + |
Preference number: 4 (lower is better) Translates to: QWPSEMKSDTQRKDPSSVRPSLH*TLVLHS Trigger: GGAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCT...GACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCATCTCAGAAGGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTGGTCATCAAGAACACTaGCCCCGACTCCACATCGCC | + |
Preference number: 4 (lower is better) Translates to: HFAGVVLLNMYSNMKISPGHQEH*PRLHIA Trigger: GGCGATGTGGAGTCGGGGTCAGTGTTCTTGATGACC...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGATCACTTCCAAGGTTTaGCGAGGGTGCTTGTCTGAA | + |
Preference number: 4 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWITSKV*RGCLSE Trigger: TTCAGACAAGCACCCTCGGCAAACCTTGGAAGTGAT...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | CAGTGGCCTTCTGAGATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCGACCCAGGCCATCACTaGATTGAACACTTGTTCTTC | + |
Preference number: 4 (lower is better) Translates to: QWPSEMKSDTQRKDPSSVDPGHH*IEHLFF Trigger: GAAGAACAAGTGTTCAATGCAGTGATGGCCTGGGTC...GACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCATCTCAGAAGGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGTGTATTTCTGCCAGCTaGAGGAGGCAAGCAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKCISAS*RRQAAG Trigger: GCCTGCTGCTTGCCTCCTCCAGCTGGCAGAAATACA...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCATAGCGTTCAACACTaGAAATGGCATCTCCACTGC | + |
Preference number: 4 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWHSVQH*KWHLHC Trigger: GCAGTGGAGATGCCATTTCCAGTGTTGAACGCTATG...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGCATAGCGTTCAACACTaGAAATGGCATCTCCACTGC | + |
Preference number: 4 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSHSVQH*KWHLHC Trigger: GCAGTGGAGATGCCATTTCCAGTGTTGAACGCTATG...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACTGGGGTCTCCAAGGGTaGAGCGGCTTGTTACATCCA | + |
Preference number: 4 (lower is better) Translates to: KISPLVYIRVTSESPGQNWGLQG*SGLLHP Trigger: TGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCA...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGATCACTACTTCTGTCTaGCGGCTTTCTGCCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKITTSV*RLSASS Trigger: GGAGCTGGCAGAAAGCCGGCAGACAGAAGTAGTGAT...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CCACACTCGCCTTCACTTCATCACTGGCAATCTCTGCAGATGTATAGATATGTCCTTCTGGCAGCTTGTTaGGGTCTCCAAGGGTGCAGC | + |
Preference number: 4 (lower is better) Translates to: PHSPSLHHWQSLQMYRYVLLAAC*GLQGCS Trigger: GCTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAG...GACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGGCGAGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTTCTTCCACAGTGATCTaGGAGGTATATGCAAAGTCA | + |
Preference number: 4 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRSSTVI*EVYAKS Trigger: TGACTTTGCATATACCTCCCAGATCACTGTGGAAGA...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGTGGCCGGAAGTAACATaGATTCTTCACTCTCCATTA | + |
Preference number: 4 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWWPEVT*ILHSPL Trigger: TAATGGAGAGTGAAGAATTCATGTTACTTCCGGCCA...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGGTCTCTCCCTCCCACTaGATAGATCATGTCCTGGTA | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKVSPSH*IDHVLV Trigger: TACCAGGACATGATCTATGCAGTGGGAGGGAGAGAC...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGACCACGGGAGACCACTaGTTAGTTCTGGGGTTGTAT | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKTTGDH*LVLGLY Trigger: ATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGT...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR CCA 90 bp | CAGTGGCCTTCTGAGATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCCACGTATTGGCATCTaGGTCAAAAACTTCAATGGT | + |
Preference number: 4 (lower is better) Translates to: QWPSEMKSDTQRKDPSSVPRIGI*VKNFNG Trigger: ACCATTGAAGTTTTTGACCCAGATGCCAATACGTGG...GACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCATCTCAGAAGGCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR TCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGCCTGAATACTGTATTTaGCCCAGGCCATCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKPEYCI*PRPSLH Trigger: ATGCAGTGATGGCCTGGGTCAAATACAGTATTCAGG...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | AAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCAAAGGCCTTCTGGCAGCTTGTTaGGGTCTCCAAGGGTGCAGC | + |
Preference number: 4 (lower is better) Translates to: KAKNKYSSAQSGKALCKGLLAAC*GLQGCS Trigger: GCTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAG...GCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGGTTCAACACTGGAAATaGCATCTCCACTGCACCAAC | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKVQHWK*HLHCTN Trigger: GTTGGTGCAGTGGAGATGCCATTTCCAGTGTTGAAC...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CCACACTCGCCTTCACTTCATCACTGGCAATCTCTGCAGATGTATAGATATGTCCCATTCGCCACTCATTaGTCTGGGGGTCATAGCGTT | + |
Preference number: 4 (lower is better) Translates to: PHSPSLHHWQSLQMYRYVPFATH*SGGHSV Trigger: AACGCTATGACCCCCAGACCAATGAGTGGCGAATGG...GACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGGCGAGTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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3UTR CAA 72 bp | AAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATaGTGCAAAGGCGGCGTTTTGCAGGTGAGCTCCGTC | + |
Preference number: 4 (lower is better) Translates to: KNKYSSAQSGKA*CKGGVLQVSSV Trigger: GACGGAGCTCACCTGCAAAACGCCGCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR TCA 90 bp | TCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCACCGAGGGTGCTTGTCTaGAATATAGGGCATGCGAGC | + |
Preference number: 4 (lower is better) Translates to: SNMKISPLVYIRVTSESPPRVLV*NIGHAS Trigger: GCTCGCATGCCCTATATTTCAGACAAGCACCCTCGG...TGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGACCTCTCAACTATATTaGGGCAAGAGACACCATCCT | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKTSQLY*GKRHHP Trigger: AGGATGGTGTCTCTTGCCTCAATATAGTTGAGAGGT...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | AGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGTCTCATCTGAAATATAGGGCATaGGAGCAGGTTGGGGAACCC | + |
Preference number: 4 (lower is better) Translates to: RGEGEGKGYSFWLWLKSHLKYRA*EQVGEP Trigger: GGGTTCCCCAACCTGCTCGCATGCCCTATATTTCAG...ATGAGACTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | GTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGGTCAGAGCCTACGGTaGCCACCAGGAACTTGGGAC | + |
Preference number: 4 (lower is better) Translates to: VLLNMYSNMKISPLVYIRGQSLR*PPGTWD Trigger: GTCCCAAGTTCCTGGTGGGCACCGTAGGCTCTGACC...CCTTATATACACCAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACCATTCCAGTCTCTCCTaGTCGAATGTTGGTACACCT | + |
Preference number: 4 (lower is better) Translates to: KISPLVYIRVTSESPGQNHSSLS*SNVGTP Trigger: AGGTGTACCAACATTCGACCAGGAGAGACTGGAATG...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CCACACTCGCCTTCACTTCATCACTGGCAATCTCTGCAGATGTATAGATATGTCCAATCAGGAGCTCCATaGCCCTCTCATCTATGTCTC | + |
Preference number: 4 (lower is better) Translates to: PHSPSLHHWQSLQMYRYVQSGAP*PSHLCL Trigger: GAGACATAGATGAGAGGGCCATGGAGCTCCTGATTG...GACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGGCGAGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GGTGCCAGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGCTCTCCATTACCTCTTaGAAGTTATGTTGGGTGAAC | + |
Preference number: 4 (lower is better) Translates to: GARGEGEGKGYSFWLWLKLSITS*KLCWVN Trigger: GTTCACCCAACATAACTTTCAAGAGGTAATGGAGAG...CTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCTGGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | TTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGCCTGAATACTGTATTTaGCCCAGGCCATCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: FAGVVLLNMYSNMKISPLPEYCI*PRPSLH Trigger: ATGCAGTGATGGCCTGGGTCAAATACAGTATTCAGG...CAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | AAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCAAAGGCCTGAAATATAGGGCATaGGAGCAGGTTGGGGAACCC | + |
Preference number: 4 (lower is better) Translates to: KAKNKYSSAQSGKALCKGLKYRA*EQVGEP Trigger: GGGTTCCCCAACCTGCTCGCATGCCCTATATTTCAG...GCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTATGAGGATCCATCATaGCCGCCTACTGCATATAAC | + |
Preference number: 4 (lower is better) Translates to: HFAGVVLLNMYSNMKISPYEDPS*PPTAYN Trigger: GTTATATGCAGTAGGCGGCCATGATGGATCCTCATA...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | AGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGTCTCATACCACGGGAGACCACTaGTTAGTTCTGGGGTTGTAT | + |
Preference number: 4 (lower is better) Translates to: RGEGEGKGYSFWLWLKSHTTGDH*LVLGLY Trigger: ATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGT...ATGAGACTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR TCA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAGGCAAGAGAGTCTaGACATTGCCCTCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYAGKRV*TLPSST Trigger: TGTGGAAGAGGGCAATGTTCAGACTCTCTTGCCTGC...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTCTCTCCATTACCTCTTaGAAGTTATGTTGGGTGAAC | + |
Preference number: 4 (lower is better) Translates to: HFAGVVLLNMYSNMKISPLSITS*KLCWVN Trigger: GTTCACCCAACATAACTTTCAAGAGGTAATGGAGAG...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACTGGCCGGAAGTAACATaGATTCTTCACTCTCCATTA | + |
Preference number: 4 (lower is better) Translates to: KISPLVYIRVTSESPGQNWPEVT*ILHSPL Trigger: TAATGGAGAGTGAAGAATTCATGTTACTTCCGGCCA...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | TCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAAACACTATTGAGATATaGGGATCCATCATGGCCGCC | + |
Preference number: 4 (lower is better) Translates to: SNMKISPLVYIRVTSESPNTIEI*GSIMAA Trigger: GGCGGCCATGATGGATCCTCATATCTCAATAGTGTT...TGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATCTCCCCTGTAAACATTaGTCGGAAGTAGGGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: VQSFEVKALPNIKEHMQDLPCKH*SEVGAA Trigger: TGCAGCCCCTACTTCCGAGCAATGTTTACAGGGGAG...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GTTCTATTGTTTTCTCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATGACAGGATGACGCGGTaGGCATATATCTTCTTAGCG | + |
Preference number: 4 (lower is better) Translates to: VLLFSPAVQSFEVKALPNDRMTR*AYIFLA Trigger: CGCTAAGAAGATATATGCCCACCGCGTCATCCTGTC...ATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGAGAAAACAATAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GTTCTATTGTTTTCTCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATCAATCAGGAGCTCCATaGCCCTCTCATCTATGTCTC | + |
Preference number: 4 (lower is better) Translates to: VLLFSPAVQSFEVKALPNQSGAP*PSHLCL Trigger: GAGACATAGATGAGAGGGCCATGGAGCTCCTGATTG...ATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGAGAAAACAATAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CCACACTCGCCTTCACTTCATCACTGGCAATCTCTGCAGATGTATAGATATGTCTCTTCCACAGTGATCTaGGAGGTATATGCAAAGTCA | + |
Preference number: 4 (lower is better) Translates to: PHSPSLHHWQSLQMYRYVSSTVI*EVYAKS Trigger: TGACTTTGCATATACCTCCCAGATCACTGTGGAAGA...GACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGGCGAGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | ATCACTGGCAATCTCTGCAGATGTATAGATATGTCTAAAAGGAATAACATCAGGTGTATTTCTGCCAGCTaGAGGAGGCAAGCAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: ITGNLCRCIDMSKRNNIRCISAS*RRQAAG Trigger: GCCTGCTGCTTGCCTCCTCCAGCTGGCAGAAATACA...CCTGATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | TTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGGAAAGTTATGTTGGGTaGACTTGTCTGCAATCCTTA | + |
Preference number: 4 (lower is better) Translates to: FAGVVLLNMYSNMKISPLESYVG*TCLQSL Trigger: TAAGGATTGCAGACAAGTTCACCCAACATAACTTTC...CAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATTCACATAGCTCCCGGTaGTTTCTCAGAAGGTTGATC | + |
Preference number: 4 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYSHSSR*FLRRLI Trigger: GATCAACCTTCTGAGAAAGCACCGGGAGCTATGTGA...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGTTCAACACTGGAAATaGCATCTCCACTGCACCAAC | + |
Preference number: 4 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYVQHWK*HLHCTN Trigger: GTTGGTGCAGTGGAGATGCCATTTCCAGTGTTGAAC...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTGGTCAAAAACTTCAATaGTCTTCAAGTATGTTGTGC | + |
Preference number: 4 (lower is better) Translates to: HFAGVVLLNMYSNMKISPGQKLQ*SSSMLC Trigger: GCACAACATACTTGAAGACCATTGAAGTTTTTGACC...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR TCA 90 bp | AGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGTCTCATGAAAGTTATGTTGGGTaGACTTGTCTGCAATCCTTA | + |
Preference number: 4 (lower is better) Translates to: RGEGEGKGYSFWLWLKSHESYVG*TCLQSL Trigger: TAAGGATTGCAGACAAGTTCACCCAACATAACTTTC...ATGAGACTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | AAATTAAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCATCGCCTTTTGCTCATTaGAGCTACCATTCGCCACTC | + |
Preference number: 4 (lower is better) Translates to: KLKPKINTLLHRAERHCASPFAH*SYHSPL Trigger: GAGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGA...TGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATAACACTATTGAGATATaGGGATCCATCATGGCCGCC | + |
Preference number: 4 (lower is better) Translates to: VQSFEVKALPNIKEHMQDNTIEI*GSIMAA Trigger: GGCGGCCATGATGGATCCTCATATCTCAATAGTGTT...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR TCA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATACCTCTCAACTATATTaGGGCAAGAGACACCATCCT | + |
Preference number: 4 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYTSQLY*GKRHHP Trigger: AGGATGGTGTCTCTTGCCTCAATATAGTTGAGAGGT...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATGACCCAGGCCATCACTaGATTGAACACTTGTTCTTC | + |
Preference number: 4 (lower is better) Translates to: VQSFEVKALPNIKEHMQDDPGHH*IEHLFF Trigger: GAAGAACAAGTGTTCAATGCAGTGATGGCCTGGGTC...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | GTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGCATTCCAGTCTCTCCTaGTCGAATGTTGGTACACCT | + |
Preference number: 4 (lower is better) Translates to: VLLNMYSNMKISPLVYIRHSSLS*SNVGTP Trigger: AGGTGTACCAACATTCGACCAGGAGAGACTGGAATG...CCTTATATACACCAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
||
CDS-3UTR CCA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATTATGAGGATCCATCATaGCCGCCTACTGCATATAAC | + |
Preference number: 4 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYYEDPS*PPTAYN Trigger: GTTATATGCAGTAGGCGGCCATGATGGATCCTCATA...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | TCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAACATCGCTGCTCCATTaGTTAGTTTTGGGGTCATAT | + |
Preference number: 4 (lower is better) Translates to: SNMKISPLVYIRVTSESPTSLLH*LVLGSY Trigger: ATATGACCCCAAAACTAACCAATGGAGCAGCGATGT...TGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | AAATTAAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCAACCACGGGAGACCACTaGTTAGTTCTGGGGTTGTAT | + |
Preference number: 4 (lower is better) Translates to: KLKPKINTLLHRAERHCATTGDH*LVLGLY Trigger: ATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGT...TGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR TCA 90 bp | AAATTAAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCAGCTTTCTCAGAAGGTTaGTCACTTCCAAGGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: KLKPKINTLLHRAERHCAAFSEG*SLPRFA Trigger: GGCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGC...TGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTTAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR GCA 90 bp | ATCACTGGCAATCTCTGCAGATGTATAGATATGTCTAAAAGGAATAACATCAGGTCACATAGCTCCCGGTaGTTTCTCAGAAGGTTGATC | + |
Preference number: 4 (lower is better) Translates to: ITGNLCRCIDMSKRNNIRSHSSR*FLRRLI Trigger: GATCAACCTTCTGAGAAAGCACCGGGAGCTATGTGA...CCTGATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATACATCGCTGCTCCATTaGTTAGTTTTGGGGTCATAT | + |
Preference number: 4 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYTSLLH*LVLGSY Trigger: ATATGACCCCAAAACTAACCAATGGAGCAGCGATGT...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CCA 90 bp | TCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGTCAAAAACTTCAATaGTCTTCAAGTATGTTGTGC | + |
Preference number: 4 (lower is better) Translates to: SNMKISPLVYIRVTSESPGQKLQ*SSSMLC Trigger: GCACAACATACTTGAAGACCATTGAAGTTTTTGACC...TGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR CCA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATCCACGTATTGGCATCTaGGTCAAAAACTTCAATGGT | + |
Preference number: 4 (lower is better) Translates to: VQSFEVKALPNIKEHMQDPRIGI*VKNFNG Trigger: ACCATTGAAGTTTTTGACCCAGATGCCAATACGTGG...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR CCA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATGGTCAAAAACTTCAATaGTCTTCAAGTATGTTGTGC | + |
Preference number: 4 (lower is better) Translates to: VQSFEVKALPNIKEHMQDGQKLQ*SSSMLC Trigger: GCACAACATACTTGAAGACCATTGAAGTTTTTGACC...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS GCA 90 bp | GACACCATCCTGTCCACCCACAGCATAGAGAAAACCTCCAAGGACTaGCACACCAACGCTTGTCCTGCAGGTGCTTGTAGGGGCCACATC | + |
Preference number: 5 (lower is better) Translates to: DTILSTHSIEKTSKD*HTNACPAGACRGHI Trigger: GATGTGGCCCCTACAAGCACCTGCAGGACAAGCGTTGGTGTGGCAGTCCTTGGAGGTTTTCTCTATGCTGTGGGTGGACAGGATGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 90 bp | TATAGGGCATGCGAGCAGGTTGGGGAACCCCTTCTGGCAGCTTGTTaGGGTCTCCAAGGGTGCAGCGGCTTGTTACATCCATTCCAGTCT | + |
Preference number: 5 (lower is better) Translates to: YRACEQVGEPLLAAC*GLQGCSGLLHPFQS Trigger: AGACTGGAATGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAGGGGTTCCCCAACCTGCTCGCATGCCCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 90 bp | CCGACTCCACTCCTGCGGGATGTCATGGCCACCACGGGAGACCACTaGTTAGTTCTGGGGTTGTATCTCTCAGCACTGCTAAGCTCTGTA | + |
Preference number: 5 (lower is better) Translates to: PTPLLRDVMATTGDH*LVLGLYLSALLSSV Trigger: TACAGAGCTTAGCAGTGCTGAGAGATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGTGGCCATGACATCCCGCAGGAGTGGAGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR CAA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACGGGCATGCGAGCAGGTaGGGGAACCCCTTCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: KISPLVYIRVTSESPGQNGHASR*GNPFWQ Trigger: CTGCCAGAAGGGGTTCCCCAACCTGCTCGCATGCCC...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS TCA 90 bp | TCTCAGAAGGTTGATCACTTCCAAGGTTTGCCGAGGGTGCTTGTCTaGAATATAGGGCATGCGAGCAGGTTGGGGAACCCCTTCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: SQKVDHFQGLPRVLV*NIGHASRLGNPFWQ Trigger: CTGCCAGAAGGGGTTCCCCAACCTGCTCGCATGCCCTATATTTCAGACAAGCACCCTCGGCAAACCTTGGAAGTGATCAACCTTCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS TCA 90 bp | GGCAAGCAGCAGGCAAGAGAGTCTGAACATTGCCCTCTTCCACAGTaGTCTGGGAGGTATATGCAAAGTCAATCAGGAGCTCCATGGCCC | + |
Preference number: 5 (lower is better) Translates to: GKQQARESEHCPLPQ*SGRYMQSQSGAPWP Trigger: GGGCCATGGAGCTCCTGATTGACTTTGCATATACCTCCCAGATCACTGTGGAAGAGGGCAATGTTCAGACTCTCTTGCCTGCTGCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACACCCCTTCTGGCAGCTaGTTGGGGTCTCCAAGGGTG | + |
Preference number: 5 (lower is better) Translates to: KISPLVYIRVTSESPGQNTPSGS*LGSPRV Trigger: CACCCTTGGAGACCCCAACAAGCTGCCAGAAGGGGT...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTTGGTTAGTTCTGGGGTaGTATCTCTCAGCACTGCTA | + |
Preference number: 5 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRWLVLG*YLSALL Trigger: TAGCAGTGCTGAGAGATACAACCCCAGAACTAACCA...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS GCA 90 bp | ATCTTCTTAGCGCCCACAACTAGCACCACATCACATAGCTCCCGGTaGTTTCTCAGAAGGTTGATCACTTCCAAGGTTTGCCGAGGGTGC | + |
Preference number: 5 (lower is better) Translates to: IFLAPTTSTTSHSSR*FLRRLITSKVCRGC Trigger: GCACCCTCGGCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGCACCGGGAGCTATGTGATGTGGTGCTAGTTGTGGGCGCTAAGAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | TTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGCCTTCTGGCAGCTTGTaGGGGTCTCCAAGGGTGCAG | + |
Preference number: 5 (lower is better) Translates to: FAGVVLLNMYSNMKISPLPSGSL*GSPRVQ Trigger: CTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAGG...CAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GGAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCCAGGCCATCACTGCATaGAACACTTGTTCTTCACTC | + |
Preference number: 5 (lower is better) Translates to: GKKAAGGDSRHNSSTATLQAITA*NTCSSL Trigger: GAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCTG...GAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGATCGCCTTTTGCTCATaGAAGCTACCATTCGCCACT | + |
Preference number: 5 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSIAFCS*KLPFAT Trigger: AGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGAT...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 90 bp | TTCGCCACTCATTGGTCTGGGGGTCATAGCGTTCAACACTGGAAATaGCATCTCCACTGCACCAACCACCAACTGCAAAGAGTACTTCTC | + |
Preference number: 5 (lower is better) Translates to: FATHWSGGHSVQHWK*HLHCTNHQLQRVLL Trigger: GAGAAGTACTCTTTGCAGTTGGTGGTTGGTGCAGTGGAGATGCCATTTCCAGTGTTGAACGCTATGACCCCCAGACCAATGAGTGGCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 90 bp | CTACCATTCGCCACTCATTGGTCTGGGGGTCATAGCGTTCAACACTaGAAATGGCATCTCCACTGCACCAACCACCAACTGCAAAGAGTA | + |
Preference number: 5 (lower is better) Translates to: LPFATHWSGGHSVQH*KWHLHCTNHQLQRV Trigger: TACTCTTTGCAGTTGGTGGTTGGTGCAGTGGAGATGCCATTTCCAGTGTTGAACGCTATGACCCCCAGACCAATGAGTGGCGAATGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 90 bp | CTCCACATCGCCTTTTGCTCATTGAAGCTACCATTCGCCACTCATTaGTCTGGGGGTCATAGCGTTCAACACTGGAAATGGCATCTCCAC | + |
Preference number: 5 (lower is better) Translates to: LHIAFCSLKLPFATH*SGGHSVQHWKWHLH Trigger: GTGGAGATGCCATTTCCAGTGTTGAACGCTATGACCCCCAGACCAATGAGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGATGTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCGTATGTCAATGAGTTGGTaGGCCGGAAGTAACATGAAT | + |
Preference number: 5 (lower is better) Translates to: KSDTQRKDPSSVHTLRWRMSMSW*AGSNMN Trigger: ATTCATGTTACTTCCGGCCAACCAACTCATTGACAT...ACGCCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTCCGTGGTCTTGTCCTaGGCCCTTGCATTAGTGGTC | + |
Preference number: 5 (lower is better) Translates to: HFAGVVLLNMYSNMKISPSVVLS*ALALVV Trigger: GACCACTAATGCAAGGGCCAAGGACAAGACCACGGA...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | CAGTGGCCTTCTGAGATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCACTCCACATCGCCTTTaGCTCATTGAAGCTACCATT | + |
Preference number: 5 (lower is better) Translates to: QWPSEMKSDTQRKDPSSVTPHRL*LIEATI Trigger: AATGGTAGCTTCAATGAGCAAAAGGCGATGTGGAGT...GACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCATCTCAGAAGGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 90 bp | GAGAGTCTGAACATTGCCCTCTTCCACAGTGATCTGGGAGGTATATaGAAAGTCAATCAGGAGCTCCATGGCCCTCTCATCTATGTCTCG | + |
Preference number: 5 (lower is better) Translates to: ESLNIALFHSDLGGI*KVNQELHGPLIYVS Trigger: CGAGACATAGATGAGAGGGCCATGGAGCTCCTGATTGACTTTGCATATACCTCCCAGATCACTGTGGAAGAGGGCAATGTTCAGACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | CACTTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTCAAGGGTGCAGCGGCTaGTTACATCCATTCCAGTCT | + |
Preference number: 5 (lower is better) Translates to: HFAGVVLLNMYSNMKISPQGCSG*LHPFQS Trigger: AGACTGGAATGGATGTAACAAGCCGCTGCACCCTTG...AGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCGCACTGCATTGAACACTaGTTCTTCACTCCGAACATT | + |
Preference number: 5 (lower is better) Translates to: ERKLQVVTVGTTLPQPHSHCIEH*FFTPNI Trigger: AATGTTCGGAGTGAAGAACAAGTGTTCAATGCAGTG...CGAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GGAAAGAAAGCTGCAGGTGGTGACAGTCGGCACAACTCTTCCACAGCCACACTCCACTGCATTGAACACTaGTTCTTCACTCCGAACATT | + |
Preference number: 5 (lower is better) Translates to: GKKAAGGDSRHNSSTATLHCIEH*FFTPNI Trigger: AATGTTCGGAGTGAAGAACAAGTGTTCAATGCAGTG...GAGTGTGGCTGTGGAAGAGTTGTGCCGACTGTCACCACCTGCAGCTTTCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS TCA 90 bp | CAACTAGCACCACATCACATAGCTCCCGGTGCTTTCTCAGAAGGTTaGTCACTTCCAAGGTTTGCCGAGGGTGCTTGTCTGAAATATAGG | + |
Preference number: 5 (lower is better) Translates to: QLAPHHIAPGAFSEG*SLPRFAEGACLKYR Trigger: CCTATATTTCAGACAAGCACCCTCGGCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGCACCGGGAGCTATGTGATGTGGTGCTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS TCA 90 bp | ATCCATCATGGCCGCCTACTGCATATAACAGGTCATCAAGAACACTaGCCCCGACTCCACATCGCCTTTTGCTCATTGAAGCTACCATTC | + |
Preference number: 5 (lower is better) Translates to: IHHGRLLHITGHQEH*PRLHIAFCSLKLPF Trigger: GAATGGTAGCTTCAATGAGCAAAAGGCGATGTGGAGTCGGGGTCAGTGTTCTTGATGACCTGTTATATGCAGTAGGCGGCCATGATGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GTTCTATTGTTTTCTCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATCCTTCTGGCAGCTTGTaGGGGTCTCCAAGGGTGCAG | + |
Preference number: 5 (lower is better) Translates to: VLLFSPAVQSFEVKALPNPSGSL*GSPRVQ Trigger: CTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAGG...ATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGAGAAAACAATAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAATTAAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCAGGGCATGCGAGCAGGTaGGGGAACCCCTTCTGGCAG | + |
Preference number: 5 (lower is better) Translates to: KLKPKINTLLHRAERHCAGHASR*GNPFWQ Trigger: CTGCCAGAAGGGGTTCCCCAACCTGCTCGCATGCCC...TGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | ATGAAGAGTGACACTCAGCGTAAGGACCCCAGCTCTGTCCACACACTTCGCTGGCTCTTGAAAGTTATGTaGGGTGAACTTGTCTGCAAT | + |
Preference number: 5 (lower is better) Translates to: MKSDTQRKDPSSVHTLRWLLKVM*GELVCN Trigger: ATTGCAGACAAGTTCACCCAACATAACTTTCAAGAG...CCAGCGAAGTGTGTGGACAGAGCTGGGGTCCTTACGCTGAGTGTCACTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACCAGGCCATCACTGCATaGAACACTTGTTCTTCACTC | + |
Preference number: 5 (lower is better) Translates to: KISPLVYIRVTSESPGQNQAITA*NTCSSL Trigger: GAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCTG...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 90 bp | CTGAGGCCGTCTTTCCTGAATACTGTATTTGACCCAGGCCATCACTaGATTGAACACTTGTTCTTCACTCCGAACATTGAGCTCATCACT | + |
Preference number: 5 (lower is better) Translates to: LRPSFLNTVFDPGHH*IEHLFFTPNIELIT Trigger: AGTGATGAGCTCAATGTTCGGAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCTGGGTCAAATACAGTATTCAGGAAAGACGGCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACTGCTTTCTCAGAAGGTaGATCACTTCCAAGGTTTGC | + |
Preference number: 5 (lower is better) Translates to: KISPLVYIRVTSESPGQNCFLRR*ITSKVC Trigger: GCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGCA...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | TTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGTGGTTAGTTCTGGGGTaGTATCTCTCAGCACTGCTA | + |
Preference number: 5 (lower is better) Translates to: FAGVVLLNMYSNMKISPLWLVLG*YLSALL Trigger: TAGCAGTGCTGAGAGATACAACCCCAGAACTAACCA...CAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR CAA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATTCCGTGGTCTTGTCCTaGGCCCTTGCATTAGTGGTC | + |
Preference number: 5 (lower is better) Translates to: VQSFEVKALPNIKEHMQDSVVLS*ALALVV Trigger: GACCACTAATGCAAGGGCCAAGGACAAGACCACGGA...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AGGGGAGAGGGAGAAGGTAAAGGTTATTCCTTTTGGTTGTGGCTAAAGTCTCATATCGCCTTTTGCTCATaGAAGCTACCATTCGCCACT | + |
Preference number: 5 (lower is better) Translates to: RGEGEGKGYSFWLWLKSHIAFCS*KLPFAT Trigger: AGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGAT...ATGAGACTTTAGCCACAACCAAAAGGAATAACCTTTACCTTCTCCCTCTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGCAAGGGTGCAGCGGCTaGTTACATCCATTCCAGTCT | + |
Preference number: 5 (lower is better) Translates to: VLLNMYSNMKISPLVYIRQGCSG*LHPFQS Trigger: AGACTGGAATGGATGTAACAAGCCGCTGCACCCTTG...CCTTATATACACCAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | CCACACTCGCCTTCACTTCATCACTGGCAATCTCTGCAGATGTATAGATATGTCTTATGTTGGGTGAACTaGTCTGCAATCCTTAGCAAC | + |
Preference number: 5 (lower is better) Translates to: PHSPSLHHWQSLQMYRYVLCWVN*SAILSN Trigger: GTTGCTAAGGATTGCAGACAAGTTCACCCAACATAA...GACATATCTATACATCTGCAGAGATTGCCAGTGATGAAGTGAAGGCGAGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | AAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCAGGCCAGAACCTCTTGAAAGTTATGTaGGGTGAACTTGTCTGCAAT | + |
Preference number: 5 (lower is better) Translates to: KISPLVYIRVTSESPGQNLLKVM*GELVCN Trigger: ATTGCAGACAAGTTCACCCAACATAACTTTCAAGAG...GTTCTGGCCTGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | TTCGCTGGCGTGGTGCTCCTAAACATGTACTCTAACATGAAGATCAGTCCTTTGATGTCAATGAGTTGGTaGGCCGGAAGTAACATGAAT | + |
Preference number: 5 (lower is better) Translates to: FAGVVLLNMYSNMKISPLMSMSW*AGSNMN Trigger: ATTCATGTTACTTCCGGCCAACCAACTCATTGACAT...CAAAGGACTGATCTTCATGTTAGAGTACATGTTTAGGAGCACCACGCCAGCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | TCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATCACATCGCTGCTCCATaGGTTAGTTTTGGGGTCATA | + |
Preference number: 5 (lower is better) Translates to: SSCTKLRSQGSSKYKGAYHIAAP*VSFGVI Trigger: TATGACCCCAAAACTAACCAATGGAGCAGCGATGTG...ATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | TCTAACATGAAGATCAGTCCTTTGGTGTATATAAGGGTCACCTCAGAGTCACCATTATGTTGGGTGAACTaGTCTGCAATCCTTAGCAAC | + |
Preference number: 5 (lower is better) Translates to: SNMKISPLVYIRVTSESPLCWVN*SAILSN Trigger: GTTGCTAAGGATTGCAGACAAGTTCACCCAACATAA...TGGTGACTCTGAGGTGACCCTTATATACACCAAAGGACTGATCTTCATGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GTTCTATTGTTTTCTCCAGCTGTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATACTCCACATCGCCTTTaGCTCATTGAAGCTACCATT | + |
Preference number: 5 (lower is better) Translates to: VLLFSPAVQSFEVKALPNTPHRL*LIEATI Trigger: AATGGTAGCTTCAATGAGCAAAAGGCGATGTGGAGT...ATTTGGAAGAGCCTTGACTTCGAAGCTTTGTACAGCTGGAGAAAACAATAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATCACATCGCTGCTCCATaGGTTAGTTTTGGGGTCATA | + |
Preference number: 5 (lower is better) Translates to: VQSFEVKALPNIKEHMQDHIAAP*VSFGVI Trigger: TATGACCCCAAAACTAACCAATGGAGCAGCGATGTG...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | GTACAAAGCTTCGAAGTCAAGGCTCTTCCAAATATAAAGGAGCATATGCAAGATTGGTTAGTTCTGGGGTaGTATCTCTCAGCACTGCTA | + |
Preference number: 5 (lower is better) Translates to: VQSFEVKALPNIKEHMQDWLVLG*YLSALL Trigger: TAGCAGTGCTGAGAGATACAACCCCAGAACTAACCA...ATCTTGCATATGCTCCTTTATATTTGGAAGAGCCTTGACTTCGAAGCTTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS-3UTR CAA 90 bp | AAAGCCAAAAATAAATACTCTTCTGCACAGAGCGGAAAGGCATTGTGCAAAGGCTCTTCACTCCGAACATaGAGCTCATCACTAGATATT | + |
Preference number: 5 (lower is better) Translates to: KAKNKYSSAQSGKALCKGSSLRT*SSSLDI Trigger: AATATCTAGTGATGAGCTCAATGTTCGGAGTGAAGA...GCCTTTGCACAATGCCTTTCCGCTCTGTGCAGAAGAGTATTTATTTTTGGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | ATCACTGGCAATCTCTGCAGATGTATAGATATGTCTAAAAGGAATAACATCAGGTGCTTTCTCAGAAGGTaGATCACTTCCAAGGTTTGC | + |
Preference number: 5 (lower is better) Translates to: ITGNLCRCIDMSKRNNIRCFLRR*ITSKVC Trigger: GCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGCA...CCTGATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS-3UTR CAA 90 bp | ATCACTGGCAATCTCTGCAGATGTATAGATATGTCTAAAAGGAATAACATCAGGTCTTCACTCCGAACATaGAGCTCATCACTAGATATT | + |
Preference number: 5 (lower is better) Translates to: ITGNLCRCIDMSKRNNIRSSLRT*SSSLDI Trigger: AATATCTAGTGATGAGCTCAATGTTCGGAGTGAAGA...CCTGATGTTATTCCTTTTAGACATATCTATACATCTGCAGAGATTGCCAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 72 bp | TGCGAGCAGGTTGGGGAACCCCTTCTGGCAGCTTGTTaGGGTCTCCAAGGGTGCAGCGGCTTGTTACATCCA | + |
Preference number: 6 (lower is better) Translates to: CEQVGEPLLAAC*GLQGCSGLLHP Trigger: TGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAGGGGTTCCCCAACCTGCTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | ATGAGGGGGTCAGAGCCTACGGTGCCCACCAGGAACTaGGGACTAAGCAAAGGCAGGCGAACATGTTGCAGC | + |
Preference number: 6 (lower is better) Translates to: MRGSEPTVPTRN*GLSKGRRTCCS Trigger: GCTGCAACATGTTCGCCTGCCTTTGCTTAGTCCCAAGTTCCTGGTGGGCACCGTAGGCTCTGACCCCCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 72 bp | GAACCCCTTCTGGCAGCTTGTTGGGGTCTCCAAGGGTaGAGCGGCTTGTTACATCCATTCCAGTCTCTCCTG | + |
Preference number: 6 (lower is better) Translates to: EPLLAACWGLQG*SGLLHPFQSLL Trigger: CAGGAGAGACTGGAATGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAGGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 72 bp | CTCCTGCGGGATGTCATGGCCACCACGGGAGACCACTaGTTAGTTCTGGGGTTGTATCTCTCAGCACTGCTA | + |
Preference number: 6 (lower is better) Translates to: LLRDVMATTGDH*LVLGLYLSALL Trigger: TAGCAGTGCTGAGAGATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGTGGCCATGACATCCCGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS CAA 90 bp | GAACCCCTTCTGGCAGCTTGTTGGGGTCTCCAAGGGTGCAGCGGCTaGTTACATCCATTCCAGTCTCTCCTGGTCGAATGTTGGTACACC | + |
Preference number: 6 (lower is better) Translates to: EPLLAACWGLQGCSG*LHPFQSLLVECWYT Trigger: GGTGTACCAACATTCGACCAGGAGAGACTGGAATGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCAACAAGCTGCCAGAAGGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 90 bp | CGGGATGTCATGGCCACCACGGGAGACCACTGGTTAGTTCTGGGGTaGTATCTCTCAGCACTGCTAAGCTCTGTAGTGTCGTCTCTCCCT | + |
Preference number: 6 (lower is better) Translates to: RDVMATTGDHWLVLG*YLSALLSSVVSSLP Trigger: AGGGAGAGACGACACTACAGAGCTTAGCAGTGCTGAGAGATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGTGGCCATGACATCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 72 bp | CTGTCCACCCACAGCATAGAGAAAACCTCCAAGGACTaGCACACCAACGCTTGTCCTGCAGGTGCTTGTAGG | + |
Preference number: 6 (lower is better) Translates to: LSTHSIEKTSKD*HTNACPAGACR Trigger: CCTACAAGCACCTGCAGGACAAGCGTTGGTGTGGCAGTCCTTGGAGGTTTTCTCTATGCTGTGGGTGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | CTGGCAGCTTGTTGGGGTCTCCAAGGGTGCAGCGGCTaGTTACATCCATTCCAGTCTCTCCTGGTCGAATGT | + |
Preference number: 6 (lower is better) Translates to: LAACWGLQGCSG*LHPFQSLLVEC Trigger: ACATTCGACCAGGAGAGACTGGAATGGATGTAACAAGCCGCTGCACCCTTGGAGACCCCAACAAGCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS TCA 72 bp | GTTGATCACTTCCAAGGTTTGCCGAGGGTGCTTGTCTaGAATATAGGGCATGCGAGCAGGTTGGGGAACCCC | + |
Preference number: 6 (lower is better) Translates to: VDHFQGLPRVLV*NIGHASRLGNP Trigger: GGGGTTCCCCAACCTGCTCGCATGCCCTATATTTCAGACAAGCACCCTCGGCAAACCTTGGAAGTGATCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 72 bp | GCCACTCATTGGTCTGGGGGTCATAGCGTTCAACACTaGAAATGGCATCTCCACTGCACCAACCACCAACTG | + |
Preference number: 6 (lower is better) Translates to: ATHWSGGHSVQH*KWHLHCTNHQL Trigger: CAGTTGGTGGTTGGTGCAGTGGAGATGCCATTTCCAGTGTTGAACGCTATGACCCCCAGACCAATGAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | ATGGCCACCACGGGAGACCACTGGTTAGTTCTGGGGTaGTATCTCTCAGCACTGCTAAGCTCTGTAGTGTCG | + |
Preference number: 6 (lower is better) Translates to: MATTGDHWLVLG*YLSALLSSVVS Trigger: CGACACTACAGAGCTTAGCAGTGCTGAGAGATACAACCCCAGAACTAACCAGTGGTCTCCCGTGGTGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 ENSMUST00000195584.2 |
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CDS TCA 72 bp | CCACATCACATAGCTCCCGGTGCTTTCTCAGAAGGTTaGTCACTTCCAAGGTTTGCCGAGGGTGCTTGTCTG | + |
Preference number: 6 (lower is better) Translates to: PHHIAPGAFSEG*SLPRFAEGACL Trigger: CAGACAAGCACCCTCGGCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGCACCGGGAGCTATGTGATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 72 bp | GCGCCCACAACTAGCACCACATCACATAGCTCCCGGTaGTTTCTCAGAAGGTTGATCACTTCCAAGGTTTGC | + |
Preference number: 6 (lower is better) Translates to: APTTSTTSHSSR*FLRRLITSKVC Trigger: GCAAACCTTGGAAGTGATCAACCTTCTGAGAAAGCACCGGGAGCTATGTGATGTGGTGCTAGTTGTGGGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 72 bp | GCCCTCTCATCTATGTCTCGGATCACTACTTCTGTCTaGCGGCTTTCTGCCAGCTCCCCTGTAAACATTGCT | + |
Preference number: 6 (lower is better) Translates to: ALSSMSRITTSV*RLSASSPVNIA Trigger: AGCAATGTTTACAGGGGAGCTGGCAGAAAGCCGGCAGACAGAAGTAGTGATCCGAGACATAGATGAGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS TCA 72 bp | GGCCGCCTACTGCATATAACAGGTCATCAAGAACACTaGCCCCGACTCCACATCGCCTTTTGCTCATTGAAG | + |
Preference number: 6 (lower is better) Translates to: GRLLHITGHQEH*PRLHIAFCSLK Trigger: CTTCAATGAGCAAAAGGCGATGTGGAGTCGGGGTCAGTGTTCTTGATGACCTGTTATATGCAGTAGGCGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 90 bp | TATAACAGGTCATCAAGAACACTGACCCCGACTCCACATCGCCTTTaGCTCATTGAAGCTACCATTCGCCACTCATTGGTCTGGGGGTCA | + |
Preference number: 6 (lower is better) Translates to: YNRSSRTLTPTPHRL*LIEATIRHSLVWGS Trigger: TGACCCCCAGACCAATGAGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGATGTGGAGTCGGGGTCAGTGTTCTTGATGACCTGTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 72 bp | GCCTTTTGCTCATTGAAGCTACCATTCGCCACTCATTaGTCTGGGGGTCATAGCGTTCAACACTGGAAATGG | + |
Preference number: 6 (lower is better) Translates to: AFCSLKLPFATH*SGGHSVQHWKW Trigger: CCATTTCCAGTGTTGAACGCTATGACCCCCAGACCAATGAGTGGCGAATGGTAGCTTCAATGAGCAAAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | TCATCAAGAACACTGACCCCGACTCCACATCGCCTTTaGCTCATTGAAGCTACCATTCGCCACTCATTGGTC | + |
Preference number: 6 (lower is better) Translates to: SSRTLTPTPHRL*LIEATIRHSLV Trigger: GACCAATGAGTGGCGAATGGTAGCTTCAATGAGCAAAAGGCGATGTGGAGTCGGGGTCAGTGTTCTTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 72 bp | TCTGGGAGGTATATGCAAAGTCAATCAGGAGCTCCATaGCCCTCTCATCTATGTCTCGGATCACTACTTCTG | + |
Preference number: 6 (lower is better) Translates to: SGRYMQSQSGAP*PSHLCLGSLLL Trigger: CAGAAGTAGTGATCCGAGACATAGATGAGAGGGCCATGGAGCTCCTGATTGACTTTGCATATACCTCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | ACTGTATTTGACCCAGGCCATCACTGCATTGAACACTaGTTCTTCACTCCGAACATTGAGCTCATCACTAGA | + |
Preference number: 6 (lower is better) Translates to: TVFDPGHHCIEH*FFTPNIELITR Trigger: TCTAGTGATGAGCTCAATGTTCGGAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCTGGGTCAAATACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | CTTGTAGGGGCCACATCGCTGCTCCATTGGTTAGTTTaGGGGTCATATCTTTCAACACTATTGAGATATGAG | + |
Preference number: 6 (lower is better) Translates to: LVGATSLLHWLV*GSYLSTLLRYE Trigger: CTCATATCTCAATAGTGTTGAAAGATATGACCCCAAAACTAACCAATGGAGCAGCGATGTGGCCCCTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS GCA 72 bp | TCTTTCCTGAATACTGTATTTGACCCAGGCCATCACTaGATTGAACACTTGTTCTTCACTCCGAACATTGAG | + |
Preference number: 6 (lower is better) Translates to: SFLNTVFDPGHH*IEHLFFTPNIE Trigger: CTCAATGTTCGGAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCTGGGTCAAATACAGTATTCAGGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 90 bp | TTCCTGAATACTGTATTTGACCCAGGCCATCACTGCATTGAACACTaGTTCTTCACTCCGAACATTGAGCTCATCACTAGATATTATGTC | + |
Preference number: 6 (lower is better) Translates to: FLNTVFDPGHHCIEH*FFTPNIELITRYYV Trigger: GACATAATATCTAGTGATGAGCTCAATGTTCGGAGTGAAGAACAAGTGTTCAATGCAGTGATGGCCTGGGTCAAATACAGTATTCAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CCA 72 bp | ACATTGAGCTCATCACTAGATATTATGTCAATGAGTTaGTTGGCCGGAAGTAACATGAATTCTTCACTCTCC | + |
Preference number: 6 (lower is better) Translates to: TLSSSLDIMSMS*LAGSNMNSSLS Trigger: GGAGAGTGAAGAATTCATGTTACTTCCGGCCAACCAACTCATTGACATAATATCTAGTGATGAGCTCAATGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |
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CDS CAA 72 bp | TTGAGCTCATCACTAGATATTATGTCAATGAGTTGGTaGGCCGGAAGTAACATGAATTCTTCACTCTCCATT | + |
Preference number: 6 (lower is better) Translates to: LSSSLDIMSMSW*AGSNMNSSLSI Trigger: AATGGAGAGTGAAGAATTCATGTTACTTCCGGCCAACCAACTCATTGACATAATATCTAGTGATGAGCTCAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111611.8 ENSMUST00000117467.7 |