Pregenerated sensors for KLHL18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054792Ensembl transcript IDs: ENSMUST00000068025.13, ENSMUST00000197336.5, ENSMUST00000198164.5, ENSMUST00000198400.5, ENSMUST00000200256.2
Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTaGCAAGGGGGAGCTGGGCCAGTGCTGCAGCAGGTGTTCGCTGGG | + |
Preference number: 1 (lower is better) Translates to: REGSAGRPPAHECSL*QGGAGPVLQQVFAG Trigger: CCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR TCA 90 bp | ACATCTTGCTTCCCAGGGAGGCGGCTCCGTGTCGGCAGCGCTTGTTaGGCATGCTGGCTGCCGGGTGCCAGGTGGCCGTGTGGTGGTTGT | + |
Preference number: 1 (lower is better) Translates to: TSCFPGRRLRVGSAC*ACWLPGARWPCGGC Trigger: ACAACCACCACACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTGGGAAGCAAGATGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 90 bp | CTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGCCAGTGCTaGAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGA | + |
Preference number: 1 (lower is better) Translates to: LPMSAPCGKGELGQC*SRCSLGLDGACVPG Trigger: TCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | CTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGCCAGTaGTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCT | + |
Preference number: 1 (lower is better) Translates to: LLPMSAPCGKGELGQ*CSRCSLGLDGACVP Trigger: AGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | TGCAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTaGTCCCTGTGGCAAGGGGGAGCTGGGCCAGTGCTGCAGCAGGTG | + |
Preference number: 1 (lower is better) Translates to: CRRREGSAGRPPAHE*SLWQGGAGPVLQQV Trigger: CACCTGCTGCAGCACTGGCCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | CAGGGAGGCGGCTCCGTGTCGGCAGCGCTTGTTGAGCATGCTGGCTaGCGGGTGCCAGGTGGCCGTGTGGTGGTTGTAGTGTTCCACACT | + |
Preference number: 1 (lower is better) Translates to: QGGGSVSAALVEHAG*RVPGGRVVVVVFHT Trigger: AGTGTGGAACACTACAACCACCACACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 90 bp | AGGCGCCCACAGCTGGCCACGAGGGAGACCCGGCTCCGGCGTGTGTaGATGGGTACTATGAGACACCACTGGTCTGCCACAGAGCTGTAC | + |
Preference number: 1 (lower is better) Translates to: RRPQLATRETRLRRV*MGTMRHHWSATELY Trigger: GTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGTACCCATGCACACACGCCGGAGCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 90 bp | GTGCCCCTGTCGAAGGGAGAGCCCGTGCACTCGCAGCATGCTAGCTaGTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCC | + |
Preference number: 1 (lower is better) Translates to: VPLSKGEPVHSQHAS*CSCTTTGSDNTRVS Trigger: GGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGAGTGCACGGGCTCTCCCTTCGACAGGGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | AGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTaGACTCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCA | + |
Preference number: 1 (lower is better) Translates to: RQGPSPLCPCRRESP*TRSMLAAVAAPPQA Trigger: TGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGAGTGCACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | GCCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTaGCTGGACCAGCAAAGCACTTCCGTGTTACTGGCTGTGGGACCC | + |
Preference number: 1 (lower is better) Translates to: ASAAAGVRWAWMEPV*LDQQSTSVLLAVGP Trigger: GGGTCCCACAGCCAGTAACACGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | TTGACTGTCCATCGTAACCTCCCACTGCATAGAGGCGCCCACAGCTaGCCACGAGGGAGACCCGGCTCCGGCGTGTGTGCATGGGTACTA | + |
Preference number: 1 (lower is better) Translates to: LTVHRNLPLHRGAHS*PRGRPGSGVCAWVL Trigger: TAGTACCCATGCACACACGCCGGAGCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCTATGCAGTGGGAGGTTACGATGGACAGTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 90 bp | TCGAAGGGAGAGCCCGTGCACTCGCAGCATGCTAGCTGCTGTAGCTaGACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCC | + |
Preference number: 1 (lower is better) Translates to: SKGEPVHSQHASCCS*TTTGSDNTRVSLLS Trigger: GGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGAGTGCACGGGCTCTCCCTTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | ACTTCTGTTCTCCCTGCTTGCTGGAGACAGGGGCCAAGTCCTCTGTaGCCCTGTCGAAGGGAGAGCCCGTGCACTCGCAGCATGCTAGCT | + |
Preference number: 1 (lower is better) Translates to: TSVLPACWRQGPSPL*PCRRESPCTRSMLA Trigger: AGCTAGCATGCTGCGAGTGCACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | GTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTaGACCAGCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGA | + |
Preference number: 1 (lower is better) Translates to: VLQQVFAGLGWSLCA*TSKALPCYWLWDPR Trigger: TCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | AGCCCAGAGAGAGAGGAGAAGAGGAAGTGCAGTGGCCAGACCCCATaGCCCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCC | + |
Preference number: 1 (lower is better) Translates to: SPEREEKRKCSGQTP*PTRRVGPTSCYILS Trigger: GGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGGGCCATGGGGTCTGGCCACTGCACTTCCTCTTCTCCTCTCTCTCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | CCGGCTCCGGCGTGTGTGCATGGGTACTATGAGACACCACTGGTCTaGCACAGAGCTGTACATCTCAGCAATACTGAGGAAGCCAGAGCC | + |
Preference number: 1 (lower is better) Translates to: PAPACVHGYYETPLV*HRAVHLSNTEEARA Trigger: GGCTCTGGCTTCCTCAGTATTGCTGAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGTACCCATGCACACACGCCGGAGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 90 bp | CCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCCTATaGTTGTACCAGATCCCTAGCCCACCACGTCCCATCCTCTCCTTA | + |
Preference number: 1 (lower is better) Translates to: PLPLLRGLSPGRKRL*LYQIPSPPRPILSL Trigger: TAAGGAGAGGATGGGACGTGGTGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CCA 90 bp | TTCACCACAGCCACACCCACACGGCTTCGGGCTGTTGTCATGGGATaGCACTTTTCCCAGCGATTGGCGATAGGGTCGAACACTTCCACC | + |
Preference number: 1 (lower is better) Translates to: FTTATPTRLRAVVMG*HFSQRLAIGSNTST Trigger: GGTGGAAGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAAGCCGTGTGGGTGTGGCTGTGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR TCA 90 bp | CCACTGTCCACTTGTCCGTCTCAGGTGAGTAGGTCTCCACAGAGTTaGGGGAGGAGTTGCCGTCATAGCCTCCACACACGTAGATCTGTC | + |
Preference number: 1 (lower is better) Translates to: PLSTCPSQVSRSPQS*GRSCRHSLHTRRSV Trigger: GACAGATCTACGTGTGTGGAGGCTATGACGGCAACTCCTCCCTCAACTCTGTGGAGACCTACTCACCTGAGACGGACAAGTGGACAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CCA 90 bp | GAGTCACCTGACCAAGCTGGTCCATGGCTGGTAGGAGCAAGCCCCTaGTTAGGTCCTAGAGGTACAAATGGTCAATGTGCTCTGGAAGCG | + |
Preference number: 1 (lower is better) Translates to: ESPDQAGPWLVGASP*LGPRGTNGQCALEA Trigger: CGCTTCCAGAGCACATTGACCATTTGTACCTCTAGGACCTAACCAGGGGCTTGCTCCTACCAGCCATGGACCAGCTTGGTCAGGTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | CCATCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATaGATGGAAAATAGCGGAATGGCAGGGAAGACGAGTCACCTGACC | + |
Preference number: 1 (lower is better) Translates to: PSCWREGGRTPRVGK*MENSGMAGKTSHLT Trigger: GGTCAGGTGACTCGTCTTCCCTGCCATTCCGCTATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | GATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGTGGACAGTaGAACAGACCGGACCCTAAGACCCAGTTTGGGGCTAGAAACAAT | + |
Preference number: 1 (lower is better) Translates to: DPGRQQRARNQSGGQ*NRPDPKTQFGARNN Trigger: ATTGTTTCTAGCCCCAAACTGGGTCTTAGGGTCCGGTCTGTTCCACTGTCCACCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR TCA 90 bp | GTAGTGTTCCACACTGCTGAAGATCTGCAAGCCATCGTGGCCTCCTaGCACATATATCCTGCCCTCAAAGACTGTCACCCCAGCAGCACT | + |
Preference number: 1 (lower is better) Translates to: VVFHTAEDLQAIVAS*HIYPALKDCHPSST Trigger: AGTGCTGCTGGGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAGGAGGCCACGATGGCTTGCAGATCTTCAGCAGTGTGGAACACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 90 bp | CCCCTAGAGTCTACCTCAGCAGGCAAACTGAGGGGCAGGAAGAAATaGTGGCGCTCCACTGGGAGCCTAGTTAAGATGTATCAGTTACCA | + |
Preference number: 1 (lower is better) Translates to: PLESTSAGKLRGRKK*WRSTGSLVKMYQLP Trigger: TGGTAACTGATACATCTTAACTAGGCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCCCCTCAGTTTGCCTGCTGAGGTAGACTCTAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | GATGGTGGATGGGTGAGTGCGAATCTGGGCAGACATGTTGTTTCTTaGTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGT | + |
Preference number: 1 (lower is better) Translates to: DGGWVSANLGRHVVS*WPKRERMYVGVGIC Trigger: ACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCTGCCCAGATTCGCACTCACCCATCCACCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | CTAGAGTCTACCTCAGCAGGCAAACTGAGGGGCAGGAAGAAATGCTaGCGCTCCACTGGGAGCCTAGTTAAGATGTATCAGTTACCAGAT | + |
Preference number: 1 (lower is better) Translates to: LESTSAGKLRGRKKC*RSTGSLVKMYQLPD Trigger: ATCTGGTAACTGATACATCTTAACTAGGCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCCCCTCAGTTTGCCTGCTGAGGTAGACTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 90 bp | GGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATaGCAATTGCACACACTGGGAAACCTGATGGTCTGGGGAAAGGGA | + |
Preference number: 1 (lower is better) Translates to: GSLHCREQESFLLNL*QLHTLGNLMVWGKG Trigger: TCCCTTTCCCCAGACCATCAGGTTTCCCAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 90 bp | AACATTATTTTCAAGTGCTTAGAGCAGAGGCCCGGCTCTTTACATTaGAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCAC | + |
Preference number: 1 (lower is better) Translates to: NIIFKCLEQRPGSLH*REQESFLLNLWQLH Trigger: GTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGCCTCTGCTCTAAGCACTTGAAAATAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGATCGGGGCCGAGTCCTaGAAGCTGGCAGGTGGGGCC | + |
Preference number: 2 (lower is better) Translates to: SAGRPPAHECSLWQGGAGIGAES*KLAGGA Trigger: GGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGAT...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CAA 90 bp | AACATCTTGCTTCCCAGGGAGGCGGCTCCGTGTCGGCAGCGCTTGTaGAGCATGCTGGCTGCCGGGTGCCAGGTGGCCGTGTGGTGGTTG | + |
Preference number: 2 (lower is better) Translates to: NILLPREAAPCRQRL*SMLAAGCQVAVWWL Trigger: CAACCACCACACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTGGGAAGCAAGATGTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CAA 90 bp | ACAAACATCTTGCTTCCCAGGGAGGCGGCTCCGTGTCGGCAGCGCTaGTTGAGCATGCTGGCTGCCGGGTGCCAGGTGGCCGTGTGGTGG | + |
Preference number: 2 (lower is better) Translates to: TNILLPREAAPCRQR*LSMLAAGCQVAVWW Trigger: CCACCACACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTGGGAAGCAAGATGTTTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | GGCTGCAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCGGGGAGCTGGGCCAGTaGTGCAGCAGGTGTTCGCTG | + |
Preference number: 2 (lower is better) Translates to: GCRRREGSAGRPPAHECSGELGQ*CSRCSL Trigger: CAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCC...GGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTCGGCCACAGCAGGGCTaGAGGAGAAGGGAAGGCTCG | + |
Preference number: 2 (lower is better) Translates to: LAGDRGQVLCAPVEGRARRPQQG*RRREGS Trigger: CGAGCCTTCCCTTCTCCTGCAGCCCTGCTGTGGCCG...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CCGTGTCGGCAGCGCTTGTTGAGCATGCTGGCTGCCGGGTGCCAGGTGGCCGTGGTGCTCAGCCGCAACTaGCCATCATATCCCCCGATA | + |
Preference number: 2 (lower is better) Translates to: PCRQRLLSMLAAGCQVAVVLSRN*PSYPPI Trigger: TATCGGGGGATATGATGGTCAGTTGCGGCTGAGCAC...CACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGTTCGCTGGGCTTGGATaGAGCCTGTGTGCCTGGACC | + |
Preference number: 2 (lower is better) Translates to: SAGRPPAHECSLWQGGAGFAGLG*SLCAWT Trigger: GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAA...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCCCGAGTCCTGAAAGCTaGCAGGTGGGGCCGGCGCTC | + |
Preference number: 2 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPPSPES*QVGPAL Trigger: GAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGG...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGGCTAGCTGCTGTAGCTaGACCACCACAGGCAGTGAC | + |
Preference number: 2 (lower is better) Translates to: SAGRPPAHECSLWQGGAGASCCS*TTTGSD Trigger: GTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGC...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTGCACTTCCGTGTTACTaGCTGTGGGACCCCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: LAGDRGQVLCAPVEGRARALPCY*LWDPRG Trigger: CCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGC...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCGGATGTACGTGGGAGTaGGGATCTGTGGGAGCGCTG | + |
Preference number: 2 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTGCTWE*GSVGAL Trigger: CAGCGCTCCCACAGATCCCCACTCCCACGTACATCC...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | GGCTGCAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCACCACTGCCTCTTCTaGGAGGACTCTCCCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: GCRRREGSAGRPPAHECSHHCLF*EDSPLE Trigger: TTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTG...GGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGGAGCTGGGCCAGTGCTaGAGCAGGTGTTCGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: VFWSTTASSERTLPWKEAELGQC*SRCSLG Trigger: GCCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTC...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTTGGAGCCTGTGTGCCTaGACCAGCAAAGCACTTCCG | + |
Preference number: 2 (lower is better) Translates to: LAGDRGQVLCAPVEGRARWSLCA*TSKALP Trigger: CGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCA...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCATGGAGCCTGTGTGCCTaGACCAGCAAAGCACTTCCG | + |
Preference number: 2 (lower is better) Translates to: RDAVCLHREDPGGPPGSPWSLCA*TSKALP Trigger: CGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCA...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCGTTCTCCCTGCTTGCTaGAGACAGGGGCCAAGTCCT | + |
Preference number: 2 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTVLPAC*RQGPSP Trigger: AGGACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAAC...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAGGCAGGAAGAAATGCTaGCGCTCCACTGGGAGCCTA | + |
Preference number: 2 (lower is better) Translates to: RDAVCLHREDPGGPPGSPGRKKC*RSTGSL Trigger: TAGGCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCC...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTAGTCTGCTTGCATCGTaGGGACCCAGGAGGCCCACC | + |
Preference number: 2 (lower is better) Translates to: PPGVSDPPPATFFPVSLGSLLAS*GPRRPT Trigger: GGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACT...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGAGCTGGGCCAGTGCTaGAGCAGGTGTTCGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: EPSSRPIQAGSRGQETNQELGQC*SRCSLG Trigger: GCCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTC...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCGGGGAGCTGGGCCAGTaGTGCAGCAGGTGTTCGCTG | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERGELGQ*CSRCSL Trigger: CAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCC...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGCGGCCACAGCAGGGCTaGAGGAGAAGGGAAGGCTCG | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWRPQQG*RRREGS Trigger: CGAGCCTTCCCTTCTCCTGCAGCCCTGCTGTGGCCG...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGTGGTGGATGGGTGAGTaGGAATCTGGGCAGACATGT | + |
Preference number: 2 (lower is better) Translates to: SAGRPPAHECSLWQGGAGWWMGE*ESGQTC Trigger: ACATGTCTGCCCAGATTCGCACTCACCCATCCACCA...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTGGAAGGAAGCGCCTATaGTTGTACCAGATCCCTAGC | + |
Preference number: 2 (lower is better) Translates to: LAGDRGQVLCAPVEGRARGRKRL*LYQIPS Trigger: GCTAGGGATCTGGTACAAGCATAGGCGCTTCCTTCC...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGGAGGACTTAAGCACCTaGAAAAACTGTCCCTCTGGC | + |
Preference number: 2 (lower is better) Translates to: SAGRPPAHECSLWQGGAGEDLST*KNCPSG Trigger: GCCAGAGGGACAGTTTTTCCAGGTGCTTAAGTCCTC...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGCACTTCCGTGTTACTaGCTGTGGGACCCCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: SQHASCCSCTTTGSDNTRALPCY*LWDPRG Trigger: CCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGC...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGGGTGTTCGCTGGGCTTaGATGGAGCCTGTGTGCCTG | + |
Preference number: 2 (lower is better) Translates to: VFWSTTASSERTLPWKEAGVRWA*MEPVCL Trigger: CAGGCACACAGGCTCCATCCAAGCCCAGCGAACACC...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCTTCGGGCTGTTGTCATaGGATGGCACTTTTCCCAGC | + |
Preference number: 2 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTFGLLS*DGTFPS Trigger: GCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAA...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR TCA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTCACCACTGCCTCTTCTaGGAGGACTCTCCCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: PPGVSDPPPATFFPVSLGHHCLF*EDSPLE Trigger: TTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTG...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGCACCACTGCCTCTTCTaGGAGGACTCTCCCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: SQHASCCSCTTTGSDNTRHHCLF*EDSPLE Trigger: TTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTG...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGAGGATGGTGGATGGGTaGGTGCGAATCTGGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGRMVDG*VRIWAD Trigger: GTCTGCCCAGATTCGCACTCACCCATCCACCATCCT...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGGTCGGCAGCGCTTGTTaGGCATGCTGGCTGCCGGGT | + |
Preference number: 2 (lower is better) Translates to: GRRSIESLHEVICQDQGKVGSAC*ACWLPG Trigger: ACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGAC...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGGGGGAGCTGGGCCAGTaGTGCAGCAGGTGTTCGCTG | + |
Preference number: 2 (lower is better) Translates to: GRRSIESLHEVICQDQGKGELGQ*CSRCSL Trigger: CAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCC...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCCGGCAGTTGAAGGTCTaGCCCACTGCCCAGTGCACT | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERRQLKV*PTAQCT Trigger: AGTGCACTGGGCAGTGGGGCAGACCTTCAACTGCCG...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCCCGTGTTACTGGCTGTaGGACCCCAGAGGGACTCCT | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERPCYWL*DPRGTP Trigger: AGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGG...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGGCACTTCCGTGTTACTaGCTGTGGGACCCCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRALPCY*LWDPRG Trigger: CCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGC...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGTGGAGCCTGTGTGCCTaGACCAGCAAAGCACTTCCG | + |
Preference number: 2 (lower is better) Translates to: SQHASCCSCTTTGSDNTRWSLCA*TSKALP Trigger: CGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCA...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCTTCGCTGGGCTTGGATaGAGCCTGTGTGCCTGGACC | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERFAGLG*SLCAWT Trigger: GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAA...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGGGTGTTCGCTGGGCTTaGATGGAGCCTGTGTGCCTG | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRGVRWA*MEPVCL Trigger: CAGGCACACAGGCTCCATCCAAGCCCAGCGAACACC...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTGTTCTCCCTGCTTGCTaGAGACAGGGGCCAAGTCCT | + |
Preference number: 2 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCVLPAC*RQGPSP Trigger: AGGACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAAC...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAATCCGAATGTGGGAGTaGACACCACTGTTGTCATGG | + |
Preference number: 2 (lower is better) Translates to: RDAVCLHREDPGGPPGSPIRMWE*TPLLSW Trigger: CCATGACAACAGTGGTGTCCACTCCCACATTCGGAT...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTGAGGACGTAGGACCCTaGGATCCGAATGTGGGAGTG | + |
Preference number: 2 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCEDVGP*DPNVGV Trigger: CACTCCCACATTCGGATCCCAGGGTCCTACGTCCTC...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGGGATGTACGTGGGAGTaGGGATCTGTGGGAGCGCTG | + |
Preference number: 2 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRGCTWE*GSVGAL Trigger: CAGCGCTCCCACAGATCCCCACTCCCACGTACATCC...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTTGCTGGAGAGAAGGTaGACGGACACCCAGGGTTGG | + |
Preference number: 2 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGLLERR*TDTQGW Trigger: CCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAA...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | TCCAGCGGTCCGTCTCTGGGTCGTACATCTCCACTGAGCTTAGGTTaGACTGTCCATCGTAACCTCCCACTGCATAGAGGCGCCCACAGC | + |
Preference number: 2 (lower is better) Translates to: SSGPSLGRTSPLSLG*TVHRNLPLHRGAHS Trigger: GCTGTGGGCGCCTCTATGCAGTGGGAGGTTACGATGGACAGTCAAACCTAAGCTCAGTGGAGATGTACGACCCAGAGACGGACCGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR TCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGCACCACTGCCTCTTCTaGGAGGACTCTCCCCTGGAA | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWHHCLF*EDSPLE Trigger: TTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTG...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCCAGTCAAGAATGTCCTaGTTTCAGACACACTGTGGG | + |
Preference number: 2 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTQSRMS*FQTHCG Trigger: CCCACAGTGTGTCTGAAATCAGGACATTCTTGACTG...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGAAGGATGGTGGATGGGTaGGTGCGAATCTGGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGRMVDG*VRIWAD Trigger: GTCTGCCCAGATTCGCACTCACCCATCCACCATCCT...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGAGGATGGTGGATGGGTaGGTGCGAATCTGGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWRMVDG*VRIWAD Trigger: GTCTGCCCAGATTCGCACTCACCCATCCACCATCCT...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTTTTGGCAGCGGCAGTTaGAGGTCTGCCCCACTGCCC | + |
Preference number: 2 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLFGSGS*RSAPLP Trigger: GGGCAGTGGGGCAGACCTTCAACTGCCGCTGCCAAA...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGGCCATCGTGGCCTCCTaGCACATATATCCTGCCCTC | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRAIVAS*HIYPAL Trigger: GAGGGCAGGATATATGTGTCAGGAGGCCACGATGGC...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR TCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTCCTCTCCTTAGATGGTaGGAAGAGGGATGCAGCCCA | + |
Preference number: 2 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCPLLRW*EEGCSP Trigger: TGGGCTGCATCCCTCTTCTCACCATCTAAGGAGAGG...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTTGGATGGAGCCTGTGTaGCTGGACCAGCAAAGCACT | + |
Preference number: 2 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCWMEPV*LDQQST Trigger: AGTGCTTTGCTGGTCCAGGCACACAGGCTCCATCCA...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTGAGCTGGGCCAGTGCTaGAGCAGGTGTTCGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSELGQC*SRCSLG Trigger: GCCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTC...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGGGGCCAAGTCCTCTGTaGCCCTGTCGAAGGGAGAGC | + |
Preference number: 2 (lower is better) Translates to: GRRSIESLHEVICQDQGKGPSPL*PCRRES Trigger: GCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCC...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGACTTCTGTTCTCCCTaGTTGCTGGAGACAGGGGCC | + |
Preference number: 2 (lower is better) Translates to: EPSSRPIQAGSRGQETNQDFCSP*LLETGA Trigger: GGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAAGTC...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR GCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTGCCCCACTGCCCAGTaGACTGGTAAGAGACAGTCT | + |
Preference number: 2 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGCPTAQ*TGKRQS Trigger: AGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCA...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR GCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGGGGATGCAGTCTGCTTaGATCGTGAGGACCCAGGAG | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWGMQSA*IVRTQE Trigger: CTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCC...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGCCTGGGATCCGAATGTaGGAGTGGACACCACTGTTG | + |
Preference number: 2 (lower is better) Translates to: SQHASCCSCTTTGSDNTRPGIRM*EWTPLL Trigger: CAACAGTGGTGTCCACTCCCACATTCGGATCCCAGG...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCGAGGACGTAGGACCCTaGGATCCGAATGTGGGAGTG | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWEREDVGP*DPNVGV Trigger: CACTCCCACATTCGGATCCCAGGGTCCTACGTCCTC...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCATTTCAGACACACTGTaGGATTCAGAGGAAACCCCG | + |
Preference number: 2 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTISDTL*DSEETP Trigger: CGGGGTTTCCTCTGAATCCCACAGTGTGTCTGAAAT...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGTTGCTGGAGAGAAGGTaGACGGACACCCAGGGTTGG | + |
Preference number: 2 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRLLERR*TDTQGW Trigger: CCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAA...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGTTGCTGGAGAGAAGGTaGACGGACACCCAGGGTTGG | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRLLERR*TDTQGW Trigger: CCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAA...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAAAGAAACCAATCAGGTaGACAGTGGAACAGACCGGA | + |
Preference number: 2 (lower is better) Translates to: RDAVCLHREDPGGPPGSPKKPIR*TVEQTG Trigger: TCCGGTCTGTTCCACTGTCCACCTGATTGGTTTCTT...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | CTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCCTATGCTaGTACCAGATCCCTAGCCCACCACGTCCCATCCTCTCCTTAGAT | + |
Preference number: 2 (lower is better) Translates to: LPLLRGLSPGRKRLC*YQIPSPPRPILSLD Trigger: ATCTAAGGAGAGGATGGGACGTGGTGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGTCGCAGCATGCTAGCTaGTGTAGCTGCACCACCACA | + |
Preference number: 2 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRSQHAS*CSCTTT Trigger: TGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGATCTGTTCTCCCTGCTTaGTGGAGACAGGGGCCAAGT | + |
Preference number: 2 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGSVLPA*WRQGPS Trigger: ACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGA...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGAGACATGTTGTTTCTTaGTGGCCAAAAAGGGAAAGG | + |
Preference number: 2 (lower is better) Translates to: SAGRPPAHECSLWQGGAGRHVVS*WPKRER Trigger: CCTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCT...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTTACACCCCGTCTTCTaGTCCACCACTGCCTCTTCT | + |
Preference number: 2 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGLHPVF*STTASS Trigger: AGAAGAGGCAGTGGTGGACCAGAAGACGGGGTGTAA...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGACCTGGGATCCGAATGTaGGAGTGGACACCACTGTTG | + |
Preference number: 2 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGPGIRM*EWTPLL Trigger: CAACAGTGGTGTCCACTCCCACATTCGGATCCCAGG...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTGGATGTACGTGGGAGTaGGGATCTGTGGGAGCGCTG | + |
Preference number: 2 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLGCTWE*GSVGAL Trigger: CAGCGCTCCCACAGATCCCCACTCCCACGTACATCC...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTGCAGGAAGGTTAACCTaGCAGCAGCAGGCCGGGGTG | + |
Preference number: 2 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLAGRLT*QQQAGV Trigger: CACCCCGGCCTGCTGCTGCCAGGTTAACCTTCCTGC...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | CATATATCCTGCCCTCAAAGACTGTCACCCCAGCAGCACTCCGGTTaGAGCTCATCGGAGTCACCACTGTCCACTTGTCCGTCTCAGGTG | + |
Preference number: 2 (lower is better) Translates to: HISCPQRLSPQQHSG*SSSESPLSTCPSQV Trigger: CACCTGAGACGGACAAGTGGACAGTGGTGACTCCGATGAGCTCAAACCGGAGTGCTGCTGGGGTGACAGTCTTTGAGGGCAGGATATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR TCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGAGGGAGGAGGAGCATTaGGTCTCTTCACGAGGTCAT | + |
Preference number: 2 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRREEEH*VSSRGH Trigger: ATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCCT...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGAGGAAGGAAGCGCCTATaGTTGTACCAGATCCCTAGC | + |
Preference number: 2 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGGRKRL*LYQIPS Trigger: GCTAGGGATCTGGTACAAGCATAGGCGCTTCCTTCC...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAAGGGGAGCTGGGCCAGTaGTGCAGCAGGTGTTCGCTG | + |
Preference number: 2 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKGELGQ*CSRCSL Trigger: CAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCC...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAACGGCCACAGCAGGGCTaGAGGAGAAGGGAAGGCTCG | + |
Preference number: 2 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKRPQQG*RRREGS Trigger: CGAGCCTTCCCTTCTCCTGCAGCCCTGCTGTGGCCG...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGGACTTCTGTTCTCCCTaGTTGCTGGAGACAGGGGCC | + |
Preference number: 2 (lower is better) Translates to: GRRSIESLHEVICQDQGKDFCSP*LLETGA Trigger: GGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAAGTC...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGTGGTGGATGGGTGAGTaGGAATCTGGGCAGACATGT | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRWWMGE*ESGQTC Trigger: ACATGTCTGCCCAGATTCGCACTCACCCATCCACCA...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTCGGCAGTTGAAGGTCTaGCCCACTGCCCAGTGCACT | + |
Preference number: 2 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSRQLKV*PTAQCT Trigger: AGTGCACTGGGCAGTGGGGCAGACCTTCAACTGCCG...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGCCCGGCTCTTTACATTaGAGGGAACAAGAGTCCTTC | + |
Preference number: 2 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGPGSLH*REQESF Trigger: GAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGG...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTAGGGGCAGGAAGAAATaGTGGCGCTCCACTGGGAGC | + |
Preference number: 2 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSRGRKK*WRSTGS Trigger: GCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCCCCT...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGCCATGGCACTTCGCTTaGTATTCATGCTCCCCACTC | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWPWHFA*YSCSPL Trigger: GAGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGG...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAAGTTGAGCATGCTGGCTaGCGGGTGCCAGGTGGCCGT | + |
Preference number: 2 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKVEHAG*RVPGGR Trigger: ACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAAC...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATGGTGTTCGCTGGGCTTaGATGGAGCCTGTGTGCCTG | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENGVRWA*MEPVCL Trigger: CAGGCACACAGGCTCCATCCAAGCCCAGCGAACACC...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGAAAGGCCCATCTTGCTaGAGAGAAGGTGGACGGACA | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWKGPSC*REGGRT Trigger: TGTCCGTCCACCTTCTCTCCAGCAAGATGGGCCTTT...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGGAGACAGTCTCCCTCTaGGTCCTTCTGTGCTATGGT | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWETVSL*VLLCYG Trigger: ACCATAGCACAGAAGGACCCAGAGGGAGACTGTCTC...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTGGCAGGAAGAAATGCTaGCGCTCCACTGGGAGCCTA | + |
Preference number: 2 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLGRKKC*RSTGSL Trigger: TAGGCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCC...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAGCAGGAAGGTTAACCTaGCAGCAGCAGGCCGGGGTG | + |
Preference number: 2 (lower is better) Translates to: ARLFTLQGTRVLPSESMAAGRLT*QQQAGV Trigger: CACCCCGGCCTGCTGCTGCCAGGTTAACCTTCCTGC...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTAGAGGCGCCCACAGCTaGCCACGAGGGAGACCCGGC | + |
Preference number: 2 (lower is better) Translates to: TLQGTRVLPSESMAIAHTRGAHS*PRGRPG Trigger: GCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCT...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CAA 90 bp | GTAAAGGCCCATCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTaGGCAAATGGATGGAAAATAGCGGAATGGCAGGGAAGACGAGTC | + |
Preference number: 2 (lower is better) Translates to: VKAHLAGEKVDGHPG*ANGWKIAEWQGRRV Trigger: GACTCGTCTTCCCTGCCATTCCGCTATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGATGGGCCTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | ACACGGCTTCGGGCTGTTGTCATGGGATGGCACTTTTCCCAGCGATaGGCGATAGGGTCGAACACTTCCACCACATTCAGGGAATCACCT | + |
Preference number: 2 (lower is better) Translates to: TRLRAVVMGWHFSQR*AIGSNTSTTFRESP Trigger: AGGTGATTCCCTGAATGTGGTGGAAGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAAGCCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTGCTAGCTGCTGTAGCTaGACCACCACAGGCAGTGAC | + |
Preference number: 2 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLASCCS*TTTGSD Trigger: GTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGC...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTTCGCAGCATGCTAGCTaGTGTAGCTGCACCACCACA | + |
Preference number: 2 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLSQHAS*CSCTTT Trigger: TGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCTGACACATATATCCTaGCCTCAAAGACTGTCACCC | + |
Preference number: 2 (lower is better) Translates to: VFWSTTASSERTLPWKEALTHIS*PQRLSP Trigger: GGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAG...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGTCCCTTCCTGTTTCTTaGGGACAAGTGGAGAAAGAC | + |
Preference number: 2 (lower is better) Translates to: VFWSTTASSERTLPWKEASLPVS*GQVEKD Trigger: GTCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGA...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCCTGGGATCCGAATGTaGGAGTGGACACCACTGTTG | + |
Preference number: 2 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLPGIRM*EWTPLL Trigger: CAACAGTGGTGTCCACTCCCACATTCGGATCCCAGG...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTGGGTTGGCAAATGGATaGAAAATAGCGGAATGGCAG | + |
Preference number: 2 (lower is better) Translates to: PPGVSDPPPATFFPVSLGGLANG*KIAEWQ Trigger: CTGCCATTCCGCTATTTTCCATCCATTTGCCAACCC...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGGCTGTTGTCATGGGATaGCACTTTTCCCAGCGATTG | + |
Preference number: 2 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRAVVMG*HFSQRL Trigger: CAATCGCTGGGAAAAGTGCCATCCCATGACAACAGC...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATTGGATGGAGCCTGTGTaGCTGGACCAGCAAAGCACT | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENWMEPV*LDQQST Trigger: AGTGCTTTGCTGGTCCAGGCACACAGGCTCCATCCA...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTCGGCCACAGCAGGGCTaGAGGAGAAGGGAAGGCTCG | + |
Preference number: 2 (lower is better) Translates to: TLQGTRVLPSESMAIAHTRPQQG*RRREGS Trigger: CGAGCCTTCCCTTCTCCTGCAGCCCTGCTGTGGCCG...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGTGGTGGATGGGTGAGTaGGAATCTGGGCAGACATGT | + |
Preference number: 2 (lower is better) Translates to: GRRSIESLHEVICQDQGKWWMGE*ESGQTC Trigger: ACATGTCTGCCCAGATTCGCACTCACCCATCCACCA...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGAACATTATTTTCAAGTaGTTAGAGCAGAGGCCCGGC | + |
Preference number: 2 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGNIIFK*LEQRPG Trigger: GCCGGGCCTCTGCTCTAAGCACTTGAAAATAATGTT...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTGAGACACCACTGGTCTaGCACAGAGCTGTACATCTC | + |
Preference number: 2 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLETPLV*HRAVHL Trigger: GAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTC...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGTCCCTTCCTGTTTCTTaGGGACAAGTGGAGAAAGAC | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRSLPVS*GQVEKD Trigger: GTCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGA...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGATTTCAGACACACTGTaGGATTCAGAGGAAACCCCG | + |
Preference number: 2 (lower is better) Translates to: EPSSRPIQAGSRGQETNQISDTL*DSEETP Trigger: CGGGGTTTCCTCTGAATCCCACAGTGTGTCTGAAAT...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGGGGTTGGCAAATGGATaGAAAATAGCGGAATGGCAG | + |
Preference number: 2 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRGLANG*KIAEWQ Trigger: CTGCCATTCCGCTATTTTCCATCCATTTGCCAACCC...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | TATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTaGGCAGCGGCAGTTGAAGGTCTGCCCCACTGCCCAGTGCACTGG | + |
Preference number: 2 (lower is better) Translates to: YILLVATGRILGKQI*AAAVEGLPHCPVHW Trigger: CCAGTGCACTGGGCAGTGGGGCAGACCTTCAACTGCCGCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCACCCCCACAGCGTAGATaGGCCCAGCGATGGACGTGC | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPPPQRR*AQRWTC Trigger: GCACGTCCATCGCTGGGCTCATCTACGCTGTGGGGG...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGGGCCAAGTCCTCTGTaGCCCTGTCGAAGGGAGAGC | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSGPSPL*PCRRES Trigger: GCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCAACATTATTTTCAAGTaGTTAGAGCAGAGGCCCGGC | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERNIIFK*LEQRPG Trigger: GCCGGGCCTCTGCTCTAAGCACTTGAAAATAATGTT...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTTCGCTGGGCTTGGATaGAGCCTGTGTGCCTGGACC | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCFAGLG*SLCAWT Trigger: GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCTTTCTTGGGGACAAGTaGAGAAAGACCTCACTGGAT | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERFLGDK*RKTSLD Trigger: ATCCAGTGAGGTCTTTCTCCACTTGTCCCCAAGAAA...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGATTTCTTGGGGACAAGTaGAGAAAGACCTCACTGGAT | + |
Preference number: 2 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGFLGDK*RKTSLD Trigger: ATCCAGTGAGGTCTTTCTCCACTTGTCCCCAAGAAA...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGTCTGTTTCCGTCCTGTaGAAAATGTTCACTTCAAGC | + |
Preference number: 2 (lower is better) Translates to: SQHASCCSCTTTGSDNTRSVSVL*KMFTSS Trigger: GCTTGAAGTGAACATTTTCCACAGGACGGAAACAGA...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCGAGGACGTAGGACCCTaGGATCCGAATGTGGGAGTG | + |
Preference number: 2 (lower is better) Translates to: RQISHRPQTGEYKNVSVREDVGP*DPNVGV Trigger: CACTCCCACATTCGGATCCCAGGGTCCTACGTCCTC...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGGACCAAGCTGGTCCATaGCTGGTAGGAGCAAGCCCC | + |
Preference number: 2 (lower is better) Translates to: HCREQESFLLNLWQLHTLDQAGP*LVGASP Trigger: GGGGCTTGCTCCTACCAGCCATGGACCAGCTTGGTC...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTGAGACAGTCTCCCTCTaGGTCCTTCTGTGCTATGGT | + |
Preference number: 2 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLETVSL*VLLCYG Trigger: ACCATAGCACAGAAGGACCCAGAGGGAGACTGTCTC...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTGCACGACTGTCCCCATaGCACTTCGCTTGCTATTCA | + |
Preference number: 2 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSARLSP*HFACYS Trigger: TGAATAGCAAGCGAAGTGCCATGGGGACAGTCGTGC...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR TCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGAGGTAACCATGGGGTaGCAGTTGGGAGCTCGGGCA | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSEVTMG*QLGARA Trigger: TGCCCGAGCTCCCAACTGTCACCCCATGGTTACCTC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCAAGAGTCCTTCCTTCTaGATCTATGGCAATTGCACA | + |
Preference number: 2 (lower is better) Translates to: LLAKKGKDVRGSGDLWERKSPSF*IYGNCT Trigger: TGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTT...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCTCGCAGCATGCTAGCTaGTGTAGCTGCACCACCACA | + |
Preference number: 2 (lower is better) Translates to: RQISHRPQTGEYKNVSVRSQHAS*CSCTTT Trigger: TGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAATCTGTTCTCCCTGCTTaGTGGAGACAGGGGCCAAGT | + |
Preference number: 2 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKSVLPA*WRQGPS Trigger: ACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGA...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATCTGTTCTCCCTGCTTaGTGGAGACAGGGGCCAAGT | + |
Preference number: 2 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKSVLPA*WRQGPS Trigger: ACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGA...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGTGTAGGCCTCCACGGTaGTCAGCCGCAACTGACCAT | + |
Preference number: 2 (lower is better) Translates to: HCREQESFLLNLWQLHTLCRPPR*SAATDH Trigger: ATGGTCAGTTGCGGCTGAGCACCGTGGAGGCCTACA...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCACCGTGTTACTGGCTGTaGGACCCCAGAGGGACTCCT | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSPCYWL*DPRGTP Trigger: AGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGG...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGGTGTTCGCTGGGCTTaGATGGAGCCTGTGTGCCTG | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSGVRWA*MEPVCL Trigger: CAGGCACACAGGCTCCATCCAAGCCCAGCGAACACC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTGTGGGAGCGCTGGGTaGTGTAGGGAGGTAACCATG | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCCGSAG*CREVTM Trigger: CATGGTTACCTCCCTACACCACCCAGCGCTCCCACA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGGATGTACGTGGGAGTaGGGATCTGTGGGAGCGCTG | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSGCTWE*GSVGAL Trigger: CAGCGCTCCCACAGATCCCCACTCCCACGTACATCC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | TTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATaGCACACACTGGGAAACCTGATGGTCTGGGGAAAGGGACCACCC | + |
Preference number: 2 (lower is better) Translates to: LHCREQESFLLNLWQ*HTLGNLMVWGKGPP Trigger: GGGTGGTCCCTTTCCCCAGACCATCAGGTTTCCCAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAAAGACCTCCTGCCCATaGGTGCTCCCTGTGGCAAGG | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPKTSCP*VLPVAR Trigger: CCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTT...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAGAGGTAACCATGGGGTaGCAGTTGGGAGCTCGGGCA | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPEVTMG*QLGARA Trigger: TGCCCGAGCTCCCAACTGTCACCCCATGGTTACCTC...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGCCTAGATCAAAACACTaGCTTGATGGTTCTTGGAAA | + |
Preference number: 2 (lower is better) Translates to: LPSALVRDSLPLGPSVLWPRSKH*LDGSWK Trigger: TTTCCAAGAACCATCAAGTCAGTGTTTTGATCTAGG...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGCTAGCTGCTGTAGCTaGACCACCACAGGCAGTGAC | + |
Preference number: 2 (lower is better) Translates to: TLQGTRVLPSESMAIAHTASCCS*TTTGSD Trigger: GTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGC...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGCTAGCTGCTGTAGCTaGACCACCACAGGCAGTGAC | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSASCCS*TTTGSD Trigger: GTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGACTTCTGTTCTCCCTaGTTGCTGGAGACAGGGGCC | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSDFCSP*LLETGA Trigger: GGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAAGTC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTGCCCCACTGCCCAGTaGACTGGTAAGAGACAGTCT | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCCPTAQ*TGKRQS Trigger: AGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAGAGGACTTAAGCACCTaGAAAAACTGTCCCTCTGGC | + |
Preference number: 2 (lower is better) Translates to: ARLFTLQGTRVLPSESMAEDLST*KNCPSG Trigger: GCCAGAGGGACAGTTTTTCCAGGTGCTTAAGTCCTC...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCGCACTTCCGTGTTACTaGCTGTGGGACCCCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSALPCY*LWDPRG Trigger: CCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGC...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATTCCCTTCCTGTTTCTTaGGGACAAGTGGAGAAAGAC | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENSLPVS*GQVEKD Trigger: GTCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGA...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAGACCAAGCTGGTCCATaGCTGGTAGGAGCAAGCCCC | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPDQAGP*LVGASP Trigger: GGGGCTTGCTCCTACCAGCCATGGACCAGCTTGGTC...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATGGGTTGGCAAATGGATaGAAAATAGCGGAATGGCAG | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENGLANG*KIAEWQ Trigger: CTGCCATTCCGCTATTTTCCATCCATTTGCCAACCC...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATCCCAGGGTTGGCAAATaGATGGAAAATAGCGGAATG | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENPRVGK*MENSGM Trigger: CATTCCGCTATTTTCCATCCATTTGCCAACCCTGGG...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTCTTGTCCGTCTCAGGTaGGTAGGTCTCCACAGAGTT | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCLVRLR*VGLHRV Trigger: AACTCTGTGGAGACCTACTCACCTGAGACGGACAAG...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR GCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAGACTTCTGTTCTCCCTaGTTGCTGGAGACAGGGGCC | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPDFCSP*LLETGA Trigger: GGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAAGTC...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTGGTGGATGGGTGAGTaGGAATCTGGGCAGACATGT | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCWWMGE*ESGQTC Trigger: ACATGTCTGCCCAGATTCGCACTCACCCATCCACCA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTTACACCCCGTCTTCTaGTCCACCACTGCCTCTTCT | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCLHPVF*STTASS Trigger: AGAAGAGGCAGTGGTGGACCAGAAGACGGGGTGTAA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCGTTCTCCCTGCTTGCTaGAGACAGGGGCCAAGTCCT | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSVLPAC*RQGPSP Trigger: AGGACTTGGCCCCTGTCTCCAGCAAGCAGGGAGAAC...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCATGTGGGAGCGCTGGGTaGTGTAGGGAGGTAACCATG | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPCGSAG*CREVTM Trigger: CATGGTTACCTCCCTACACCACCCAGCGCTCCCACA...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCTTGCTGGAGAGAAGGTaGACGGACACCCAGGGTTGG | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSLLERR*TDTQGW Trigger: CCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAA...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAAAGAAACCAATCAGGTaGACAGTGGAACAGACCGGA | + |
Preference number: 2 (lower is better) Translates to: ARLFTLQGTRVLPSESMAKKPIR*TVEQTG Trigger: TCCGGTCTGTTCCACTGTCCACCTGATTGGTTTCTT...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGTTCCTTCTGAATCTATaGCAATTGCACACACTGGGA | + |
Preference number: 2 (lower is better) Translates to: GRRSIESLHEVICQDQGKFLLNL*QLHTLG Trigger: TCCCAGTGTGTGCAATTGCCATAGATTCAGAAGGAA...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 90 bp | GTTTCTGTTCGCTTGTGTGCTCAGAGCCTAGATCAAAACACTGACTaGATGGTTCTTGGAAACACTGTCTACACTAGGAGGTGGGAGTGG | + |
Preference number: 2 (lower is better) Translates to: VSVRLCAQSLDQNTD*MVLGNTVYTRRWEW Trigger: CCACTCCCACCTCCTAGTGTAGACAGTGTTTCCAAGAACCATCAAGTCAGTGTTTTGATCTAGGCTCTGAGCACACAAGCGAACAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCCAGTCAAGAATGTCCTaGTTTCAGACACACTGTGGG | + |
Preference number: 2 (lower is better) Translates to: RQISHRPQTGEYKNVSVRQSRMS*FQTHCG Trigger: CCCACAGTGTGTCTGAAATCAGGACATTCTTGACTG...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTAGACATGTTGTTTCTTaGTGGCCAAAAAGGGAAAGG | + |
Preference number: 2 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLRHVVS*WPKRER Trigger: CCTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCT...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTTTCGCTTGCTATTCATaGTCCCCACTCGGGTCCATG | + |
Preference number: 2 (lower is better) Translates to: TLQGTRVLPSESMAIAHTFACYS*SPLGSM Trigger: CATGGACCCGAGTGGGGAGCATGAATAGCAAGCGAA...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCATTACACCCCGTCTTCTaGTCCACCACTGCCTCTTCT | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSLHPVF*STTASS Trigger: AGAAGAGGCAGTGGTGGACCAGAAGACGGGGTGTAA...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATTCTGTTTCCGTCCTGTaGAAAATGTTCACTTCAAGC | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENSVSVL*KMFTSS Trigger: GCTTGAAGTGAACATTTTCCACAGGACGGAAACAGA...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATACACCACTGTTGTCATaGTTGATGGTTCTCCATGTA | + |
Preference number: 2 (lower is better) Translates to: SCWREGGRTPRVGKWMENTPLLS*LMVLHV Trigger: TACATGGAGAACCATCAACCATGACAACAGTGGTGT...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTAAAGGCCCATCTTGCTaGAGAGAAGGTGGACGGACA | + |
Preference number: 2 (lower is better) Translates to: TLQGTRVLPSESMAIAHTKGPSC*REGGRT Trigger: TGTCCGTCCACCTTCTCTCCAGCAAGATGGGCCTTT...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCGGAAGGAAGCGCCTATaGTTGTACCAGATCCCTAGC | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSGRKRL*LYQIPS Trigger: GCTAGGGATCTGGTACAAGCATAGGCGCTTCCTTCC...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAAGACATGTTGTTTCTTaGTGGCCAAAAAGGGAAAGG | + |
Preference number: 2 (lower is better) Translates to: ARLFTLQGTRVLPSESMARHVVS*WPKRER Trigger: CCTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCT...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGAGGACTTAAGCACCTaGAAAAACTGTCCCTCTGGC | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSEDLST*KNCPSG Trigger: GCCAGAGGGACAGTTTTTCCAGGTGCTTAAGTCCTC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCTTTCTTGGGGACAAGTaGAGAAAGACCTCACTGGAT | + |
Preference number: 2 (lower is better) Translates to: RQISHRPQTGEYKNVSVRFLGDK*RKTSLD Trigger: ATCCAGTGAGGTCTTTCTCCACTTGTCCCCAAGAAA...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGTCTTTCCAGTGTCCTTaGGTGATGCCTGTTCTCACA | + |
Preference number: 2 (lower is better) Translates to: HCREQESFLLNLWQLHTLSFQCP*VMPVLT Trigger: TGTGAGAACAGGCATCACCCAAGGACACTGGAAAGA...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGATGCCTGTTCTCACATaGTCCTACAGTTCTGACACT | + |
Preference number: 2 (lower is better) Translates to: HCREQESFLLNLWQLHTLMPVLT*SYSSDT Trigger: AGTGTCAGAACTGTAGGATCATGTGAGAACAGGCAT...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAGAGGACTTAAGCACCTaGAAAAACTGTCCCTCTGGC | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPEDLST*KNCPSG Trigger: GCCAGAGGGACAGTTTTTCCAGGTGCTTAAGTCCTC...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTCCGTGTTACTGGCTGTaGGACCCCAGAGGGACTCCT | + |
Preference number: 2 (lower is better) Translates to: KQLYPSRRYWKDFRKADFPCYWL*DPRGTP Trigger: AGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGG...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTTTCGCTGGGCTTGGATaGAGCCTGTGTGCCTGGACC | + |
Preference number: 2 (lower is better) Translates to: KQLYPSRRYWKDFRKADFFAGLG*SLCAWT Trigger: GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAA...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAATCCGAATGTGGGAGTaGACACCACTGTTGTCATGG | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPIRMWE*TPLLSW Trigger: CCATGACAACAGTGGTGTCCACTCCCACATTCGGAT...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR TCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTAGGATGGTGGATGGGTaGGTGCGAATCTGGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: KQLYPSRRYWKDFRKADFRMVDG*VRIWAD Trigger: GTCTGCCCAGATTCGCACTCACCCATCCACCATCCT...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAGAAAAACTGTCCCTCTaGCAAGCTCACATTACACCC | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPEKLSL*QAHITP Trigger: GGGTGTAATGTGAGCTTGCCAGAGGGACAGTTTTTC...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCATTTCTTGGGGACAAGTaGAGAAAGACCTCACTGGAT | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSFLGDK*RKTSLD Trigger: ATCCAGTGAGGTCTTTCTCCACTTGTCCCCAAGAAA...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTACACCACTGTTGTCATaGTTGATGGTTCTCCATGTA | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCTPLLS*LMVLHV Trigger: TACATGGAGAACCATCAACCATGACAACAGTGGTGT...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCATTTCAGACACACTGTaGGATTCAGAGGAAACCCCG | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSISDTL*DSEETP Trigger: CGGGGTTTCCTCTGAATCCCACAGTGTGTCTGAAAT...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCGGGTTGGCAAATGGATaGAAAATAGCGGAATGGCAG | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSGLANG*KIAEWQ Trigger: CTGCCATTCCGCTATTTTCCATCCATTTGCCAACCC...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCATCTGTTTCCGTCCTGTaGAAAATGTTCACTTCAAGC | + |
Preference number: 2 (lower is better) Translates to: RYKWSMCSGSVVMRESYSSVSVL*KMFTSS Trigger: GCTTGAAGTGAACATTTTCCACAGGACGGAAACAGA...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR GCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCAGACATGTTGTTTCTTaGTGGCCAAAAAGGGAAAGG | + |
Preference number: 2 (lower is better) Translates to: LYPSRRYWKDFRKADFGSRHVVS*WPKRER Trigger: CCTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCT...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR GCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTAGAAAATCTCTTCCTTaGAGCAGCAAAAGACATTTC | + |
Preference number: 2 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCRKSLP*SSKRHF Trigger: GAAATGTCTTTTGCTGCTGCAAGGAAGAGATTTTCT...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTTTACACCCCGTCTTCTaGTCCACCACTGCCTCTTCT | + |
Preference number: 2 (lower is better) Translates to: KQLYPSRRYWKDFRKADFLHPVF*STTASS Trigger: AGAAGAGGCAGTGGTGGACCAGAAGACGGGGTGTAA...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAACACCACTGTTGTCATaGTTGATGGTTCTCCATGTA | + |
Preference number: 2 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPTPLLS*LMVLHV Trigger: TACATGGAGAACCATCAACCATGACAACAGTGGTGT...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR TCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTACATCTCAGCAATACTaGGGAAGCCAGAGCCATCAT | + |
Preference number: 2 (lower is better) Translates to: KQLYPSRRYWKDFRKADFTSQQY*GSQSHH Trigger: ATGATGGCTCTGGCTTCCTCAGTATTGCTGAGATGT...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
3UTR-3UTR CCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTCCCAGGGTTGGCAAATaGATGGAAAATAGCGGAATG | + |
Preference number: 2 (lower is better) Translates to: KQLYPSRRYWKDFRKADFPRVGK*MENSGM Trigger: CATTCCGCTATTTTCCATCCATTTGCCAACCCTGGG...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR TCA 72 bp | TTCCCAGGGAGGCGGCTCCGTGTCGGCAGCGCTTGTTaGGCATGCTGGCTGCCGGGTGCCAGGTGGCCGTGT | + |
Preference number: 3 (lower is better) Translates to: FPGRRLRVGSAC*ACWLPGARWPC Trigger: ACACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTGGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
3UTR GCA 72 bp | AGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTaGTCCCTGTGGCAAGGGGGAGCTGGGCCAGTGCTG | + |
Preference number: 3 (lower is better) Translates to: REGSAGRPPAHE*SLWQGGAGPVL Trigger: CAGCACTGGCCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR CCA 72 bp | CATCGTAACCTCCCACTGCATAGAGGCGCCCACAGCTaGCCACGAGGGAGACCCGGCTCCGGCGTGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: HRNLPLHRGAHS*PRGRPGSGVCA Trigger: TGCACACACGCCGGAGCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCTATGCAGTGGGAGGTTACGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
3UTR GCA 72 bp | ATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGCCAGTaGTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCC | + |
Preference number: 3 (lower is better) Translates to: MSAPCGKGELGQ*CSRCSLGLDGA Trigger: GGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGGCCCAGCTCCCCCTTGCCACAGGGAGCACTCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR GCA 72 bp | CAGCTGGCCACGAGGGAGACCCGGCTCCGGCGTGTGTaGATGGGTACTATGAGACACCACTGGTCTGCCACA | + |
Preference number: 3 (lower is better) Translates to: QLATRETRLRRV*MGTMRHHWSAT Trigger: TGTGGCAGACCAGTGGTGTCTCATAGTACCCATGCACACACGCCGGAGCCGGGTCTCCCTCGTGGCCAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
3UTR CCA 72 bp | AGAGAGGAGAAGAGGAAGTGCAGTGGCCAGACCCCATaGCCCACCAGGCGTGTCGGACCCACCTCCTGCTAC | + |
Preference number: 3 (lower is better) Translates to: REEKRKCSGQTP*PTRRVGPTSCY Trigger: GTAGCAGGAGGTGGGTCCGACACGCCTGGTGGGCCATGGGGTCTGGCCACTGCACTTCCTCTTCTCCTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | GCTTTACCCACACTTCCCAAGCGGCCACAGCAGGGCTaGAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCT | + |
Preference number: 3 (lower is better) Translates to: ALPTLPKRPQQG*RRREGSAGRPP Trigger: AGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCAGCCCTGCTGTGGCCGCTTGGGAAGTGTGGGTAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR GCA 72 bp | GAGCCCGTGCACTCGCAGCATGCTAGCTGCTGTAGCTaGACCACCACAGGCAGTGACAACACCAGGGTGTCC | + |
Preference number: 3 (lower is better) Translates to: EPVHSQHASCCS*TTTGSDNTRVS Trigger: GGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGAGTGCACGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR GCA 72 bp | CCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTaGACTCGCAGCATGCTAGCTGCTGTAGCTGCACCA | + |
Preference number: 3 (lower is better) Translates to: PSPLCPCRRESP*TRSMLAAVAAP Trigger: TGGTGCAGCTACAGCAGCTAGCATGCTGCGAGTGCACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GGCTGCAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCAGGAAGCGCCTATGCTaGTACCAGATCCCTAGCCCA | + |
Preference number: 3 (lower is better) Translates to: GCRRREGSAGRPPAHECSRKRLC*YQIPSP Trigger: TGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCT...GGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGCCGTGTCGGCAGCGCTaGTTGAGCATGCTGGCTGCC | + |
Preference number: 3 (lower is better) Translates to: EPSSRPIQAGSRGQETNQPCRQR*LSMLAA Trigger: GGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGG...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 72 bp | TCGAAGGGAGAGCCCGTGCACTCGCAGCATGCTAGCTaGTGTAGCTGCACCACCACAGGCAGTGACAACACC | + |
Preference number: 3 (lower is better) Translates to: SKGEPVHSQHAS*CSCTTTGSDNT Trigger: GGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGAGTGCACGGGCTCTCCCTTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | GGAGATGGCGTATCATCTCTAGGGATGCAGTCTGCTTaGATCGTGAGGACCCAGGAGGCCCACCTGGGAGCC | + |
Preference number: 3 (lower is better) Translates to: GDGVSSLGMQSA*IVRTQEAHLGA Trigger: GGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCTAGAGATGATACGCCATCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | GTGGGGAGATGGCGTATCATCTCTAGGGATGCAGTCTaGTTGCATCGTGAGGACCCAGGAGGCCCACCTGGG | + |
Preference number: 3 (lower is better) Translates to: VGRWRIISRDAV*LHREDPGGPPG Trigger: CCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCTAGAGATGATACGCCATCTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCACACTTTTCCCAGCGATaGGCGATAGGGTCGAACACT | + |
Preference number: 3 (lower is better) Translates to: RDAVCLHREDPGGPPGSPHFSQR*AIGSNT Trigger: AGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTG...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR TCA 72 bp | GGGAGACCCGGCTCCGGCGTGTGTGCATGGGTACTATaGGACACCACTGGTCTGCCACAGAGCTGTACATCT | + |
Preference number: 3 (lower is better) Translates to: GRPGSGVCAWVL*DTTGLPQSCTS Trigger: AGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGTACCCATGCACACACGCCGGAGCCGGGTCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 72 bp | GCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTaGCTGGACCAGCAAAGCACTTCCGTGTTACTGGCT | + |
Preference number: 3 (lower is better) Translates to: AAGVRWAWMEPV*LDQQSTSVLLA Trigger: AGCCAGTAACACGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 72 bp | CAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTaGACCAGCAAAGCACTTCCGTGTTACTGGCTGTGG | + |
Preference number: 3 (lower is better) Translates to: QVFAGLGWSLCA*TSKALPCYWLW Trigger: CCACAGCCAGTAACACGGAAGTGCTTTGCTGGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 72 bp | GGCAGGGAAGACGAGTCACCTGACCAAGCTGGTCCATaGCTGGTAGGAGCAAGCCCCTGGTTAGGTCCTAGA | + |
Preference number: 3 (lower is better) Translates to: GREDESPDQAGP*LVGASPWLGPR Trigger: TCTAGGACCTAACCAGGGGCTTGCTCCTACCAGCCATGGACCAGCTTGGTCAGGTGACTCGTCTTCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 72 bp | GCCACACCCACACGGCTTCGGGCTGTTGTCATGGGATaGCACTTTTCCCAGCGATTGGCGATAGGGTCGAAC | + |
Preference number: 3 (lower is better) Translates to: ATPTRLRAVVMG*HFSQRLAIGSN Trigger: GTTCGACCCTATCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAAGCCGTGTGGGTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CAA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGTTCCCTTCCTGTTTCTaGGGGACAAGTGGAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: SAGRPPAHECSLWQGGAGFPSCF*GTSGER Trigger: TCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAA...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCTTTTGGCAGCGGCAGTaGAAGGTCTGCCCCACTGCC | + |
Preference number: 3 (lower is better) Translates to: LLAKKGKDVRGSGDLWERFWQRQ*KVCPTA Trigger: GGCAGTGGGGCAGACCTTCAACTGCCGCTGCCAAAA...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTTTTGGCAGCGGCAGTaGAAGGTCTGCCCCACTGCC | + |
Preference number: 3 (lower is better) Translates to: LPSALVRDSLPLGPSVLWFWQRQ*KVCPTA Trigger: GGCAGTGGGGCAGACCTTCAACTGCCGCTGCCAAAA...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCTTCTGTTCTCCCTGCTaGCTGGAGACAGGGGCCAAG | + |
Preference number: 3 (lower is better) Translates to: LLAKKGKDVRGSGDLWERFCSPC*LETGAK Trigger: CTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAA...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTTGTCGGCAGCGCTTGTaGAGCATGCTGGCTGCCGGG | + |
Preference number: 3 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSCRQRL*SMLAAG Trigger: CCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACA...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR GCA 72 bp | CTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCCTATaGTTGTACCAGATCCCTAGCCCACCACGTCCCATC | + |
Preference number: 3 (lower is better) Translates to: LLRGLSPGRKRL*LYQIPSPPRPI Trigger: GATGGGACGTGGTGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | GCACGACTGTCCCCATGGCACTTCGCTTGCTATTCATaGTCCCCACTCGGGTCCATGTGTCCGTCTCAGGAT | + |
Preference number: 3 (lower is better) Translates to: ARLSPWHFACYS*SPLGSMCPSQD Trigger: ATCCTGAGACGGACACATGGACCCGAGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGGGGACAGTCGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CAA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCCAGACATGTTGTTTCTaGCTGGCCAAAAAGGGAAAG | + |
Preference number: 3 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTQTCCF*LAKKGK Trigger: CTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCTG...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTGCCCGGCTCTTTACATaGCAGGGAACAAGAGTCCTT | + |
Preference number: 3 (lower is better) Translates to: PPGVSDPPPATFFPVSLGARLFT*QGTRVL Trigger: AAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGGCCCGGCTCTTTACATaGCAGGGAACAAGAGTCCTT | + |
Preference number: 3 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGARLFT*QGTRVL Trigger: AAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR TCA 72 bp | CATCGGAGTCACCACTGTCCACTTGTCCGTCTCAGGTaGGTAGGTCTCCACAGAGTTGAGGGAGGAGTTGCC | + |
Preference number: 3 (lower is better) Translates to: HRSHHCPLVRLR*VGLHRVEGGVA Trigger: GGCAACTCCTCCCTCAACTCTGTGGAGACCTACTCACCTGAGACGGACAAGTGGACAGTGGTGACTCCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR-3UTR CAA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGCCACTGAGCTTAGGTTaGACTGTCCATCGTAACCTC | + |
Preference number: 3 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGPLSLG*TVHRNL Trigger: GAGGTTACGATGGACAGTCAAACCTAAGCTCAGTGG...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR TCA 72 bp | ACTTGTCCGTCTCAGGTGAGTAGGTCTCCACAGAGTTaGGGGAGGAGTTGCCGTCATAGCCTCCACACACGT | + |
Preference number: 3 (lower is better) Translates to: TCPSQVSRSPQS*GRSCRHSLHTR Trigger: ACGTGTGTGGAGGCTATGACGGCAACTCCTCCCTCAACTCTGTGGAGACCTACTCACCTGAGACGGACAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CCA 72 bp | GAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATaGAAAATAGCGGAATGGCAGGGAAGACGAGTCACC | + |
Preference number: 3 (lower is better) Translates to: EKVDGHPGLANG*KIAEWQGRRVT Trigger: GGTGACTCGTCTTCCCTGCCATTCCGCTATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTTTCCCTTCCTGTTTCTaGGGGACAAGTGGAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCFPSCF*GTSGER Trigger: TCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAA...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTTTCCCTTCCTGTTTCTaGGGGACAAGTGGAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: PPGVSDPPPATFFPVSLGFPSCF*GTSGER Trigger: TCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAA...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCAACCCCATGAGCACCTaGCTACAGGTCAGTCAAGAA | + |
Preference number: 3 (lower is better) Translates to: LLAKKGKDVRGSGDLWERNPMST*LQVSQE Trigger: TTCTTGACTGACCTGTAGCAAGGTGCTCATGGGGTT...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 72 bp | GACCAAGCTGGTCCATGGCTGGTAGGAGCAAGCCCCTaGTTAGGTCCTAGAGGTACAAATGGTCAATGTGCT | + |
Preference number: 3 (lower is better) Translates to: DQAGPWLVGASP*LGPRGTNGQCA Trigger: AGCACATTGACCATTTGTACCTCTAGGACCTAACCAGGGGCTTGCTCCTACCAGCCATGGACCAGCTTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR CCA 72 bp | TGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATaGATGGAAAATAGCGGAATGGCAGGGAAGACGAGT | + |
Preference number: 3 (lower is better) Translates to: WREGGRTPRVGK*MENSGMAGKTS Trigger: ACTCGTCTTCCCTGCCATTCCGCTATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR CCA 72 bp | ACCTCAGCAGGCAAACTGAGGGGCAGGAAGAAATGCTaGCGCTCCACTGGGAGCCTAGTTAAGATGTATCAG | + |
Preference number: 3 (lower is better) Translates to: TSAGKLRGRKKC*RSTGSLVKMYQ Trigger: CTGATACATCTTAACTAGGCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCCCCTCAGTTTGCCTGCTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGATCTGGGCAGACATGTaGTTTCTTGCTGGCCAAAAA | + |
Preference number: 3 (lower is better) Translates to: SQHASCCSCTTTGSDNTRIWADM*FLAGQK Trigger: TTTTTGGCCAGCAAGAAACAACATGTCTGCCCAGAT...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGTTAGGAAAGCAGATTTaGGCAGCGGCAGTTGAAGGT | + |
Preference number: 3 (lower is better) Translates to: EPSSRPIQAGSRGQETNQLGKQI*AAAVEG Trigger: ACCTTCAACTGCCGCTGCCAAAATCTGCTTTCCTAA...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGCTGAATCTATGGCAATaGCACACACTGGGAAACCTG | + |
Preference number: 3 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRLNLWQ*HTLGNL Trigger: CAGGTTTCCCAGTGTGTGCAATTGCCATAGATTCAG...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR GCA 72 bp | TCTACCTCAGCAGGCAAACTGAGGGGCAGGAAGAAATaGTGGCGCTCCACTGGGAGCCTAGTTAAGATGTAT | + |
Preference number: 3 (lower is better) Translates to: STSAGKLRGRKK*WRSTGSLVKMY Trigger: ATACATCTTAACTAGGCTCCCAGTGGAGCGCCAGCATTTCTTCCTGCCCCTCAGTTTGCCTGCTGAGGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAAGGAAGCGCCTATGCTaGTACCAGATCCCTAGCCCA | + |
Preference number: 3 (lower is better) Translates to: ARLFTLQGTRVLPSESMARKRLC*YQIPSP Trigger: TGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCT...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAATTCTGTTCTCCCTGCTaGCTGGAGACAGGGGCCAAG | + |
Preference number: 3 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKFCSPC*LETGAK Trigger: CTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAA...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGAACCCCATGAGCACCTaGCTACAGGTCAGTCAAGAA | + |
Preference number: 3 (lower is better) Translates to: GRRSIESLHEVICQDQGKNPMST*LQVSQE Trigger: TTCTTGACTGACCTGTAGCAAGGTGCTCATGGGGTT...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGATCTGGGCAGACATGTaGTTTCTTGCTGGCCAAAAA | + |
Preference number: 3 (lower is better) Translates to: LPSALVRDSLPLGPSVLWIWADM*FLAGQK Trigger: TTTTTGGCCAGCAAGAAACAACATGTCTGCCCAGAT...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTGCCCGGCTCTTTACATaGCAGGGAACAAGAGTCCTT | + |
Preference number: 3 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSARLFT*QGTRVL Trigger: AAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCACCCATGGCACTTCGCTaGCTATTCATGCTCCCCACT | + |
Preference number: 3 (lower is better) Translates to: ARLFTLQGTRVLPSESMAPMALR*LFMLPT Trigger: AGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGGG...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
3UTR-3UTR CAA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAAGGTGTTCGCTGGGCTaGGATGGAGCCTGTGTGCCT | + |
Preference number: 3 (lower is better) Translates to: RYKWSMCSGSVVMRESYSRCSLG*DGACVP Trigger: AGGCACACAGGCTCCATCCAAGCCCAGCGAACACCT...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTGAGTGGACACCACTGTaGTCATGGTTGATGGTTCTC | + |
Preference number: 3 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLEWTPL*SWLMVL Trigger: GAGAACCATCAACCATGACAACAGTGGTGTCCACTC...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTTTAGGAAAGCAGATTTaGGCAGCGGCAGTTGAAGGT | + |
Preference number: 3 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLLGKQI*AAAVEG Trigger: ACCTTCAACTGCCGCTGCCAAAATCTGCTTTCCTAA...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | TGGGTGAGTGCGAATCTGGGCAGACATGTTGTTTCTTaGTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTG | + |
Preference number: 3 (lower is better) Translates to: WVSANLGRHVVS*WPKRERMYVGV Trigger: CACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCTGCCCAGATTCGCACTCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | GCGTGTGTGCATGGGTACTATGAGACACCACTGGTCTaGCACAGAGCTGTACATCTCAGCAATACTGAGGAA | + |
Preference number: 3 (lower is better) Translates to: ACVHGYYETPLV*HRAVHLSNTEE Trigger: TTCCTCAGTATTGCTGAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGTACCCATGCACACACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CCA 72 bp | CCACGGACTGGTTCTCAGCACCTTCACAGTCGAGGCTaGGCAGTACATTCACAGAAGGACTTAATAAGAGGA | + |
Preference number: 3 (lower is better) Translates to: PRTGSQHLHSRG*AVHSQKDLIRG Trigger: TCCTCTTATTAAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCAGTCCGTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTAGGAAGCGCCTATGCTaGTACCAGATCCCTAGCCCA | + |
Preference number: 3 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCRKRLC*YQIPSP Trigger: TGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCT...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTTTCTGTTCTCCCTGCTaGCTGGAGACAGGGGCCAAG | + |
Preference number: 3 (lower is better) Translates to: TLQGTRVLPSESMAIAHTFCSPC*LETGAK Trigger: CTTGGCCCCTGTCTCCAGCAAGCAGGGAGAACAGAA...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGCTCTTCAACATTTTCTaGTTTCCATTTCCTCCAGTT | + |
Preference number: 3 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGLFNIF*FPFPPV Trigger: AACTGGAGGAAATGGAAACAAGAAAATGTTGAAGAG...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTCTGAATCTATGGCAATaGCACACACTGGGAAACCTG | + |
Preference number: 3 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLLNLWQ*HTLGNL Trigger: CAGGTTTCCCAGTGTGTGCAATTGCCATAGATTCAG...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCGAGTGGACACCACTGTaGTCATGGTTGATGGTTCTC | + |
Preference number: 3 (lower is better) Translates to: RQISHRPQTGEYKNVSVREWTPL*SWLMVL Trigger: GAGAACCATCAACCATGACAACAGTGGTGTCCACTC...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR TCA 72 bp | GTGATGAGGGAGAGTTATTCAAGGATGGTGGATGGGTaGGTGCGAATCTGGGCAGACATGTTGTTTCTTGCT | + |
Preference number: 3 (lower is better) Translates to: VMRESYSRMVDG*VRIWADMLFLA Trigger: AGCAAGAAACAACATGTCTGCCCAGATTCGCACTCACCCATCCACCATCCTTGAATAACTCTCCCTCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR TCA 72 bp | TCTTTCCAGTGTCCTTGGGTGATGCCTGTTCTCACATaGTCCTACAGTTCTGACACTGAGACAGATCAGCCA | + |
Preference number: 3 (lower is better) Translates to: SFQCPWVMPVLT*SYSSDTETDQP Trigger: TGGCTGATCTGTCTCAGTGTCAGAACTGTAGGATCATGTGAGAACAGGCATCACCCAAGGACACTGGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR GCA 72 bp | TTCAAGTGCTTAGAGCAGAGGCCCGGCTCTTTACATTaGAGGGAACAAGAGTCCTTCCTTCTGAATCTATGG | + |
Preference number: 3 (lower is better) Translates to: FKCLEQRPGSLH*REQESFLLNLW Trigger: CCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGCCTCTGCTCTAAGCACTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 72 bp | AGGTCAGTCAAGAATGTCCTGATTTCAGACACACTGTaGGATTCAGAGGAAACCCCGACTGCTTTAGGAGGA | + |
Preference number: 3 (lower is better) Translates to: RSVKNVLISDTL*DSEETPTALGG Trigger: TCCTCCTAAAGCAGTCGGGGTTTCCTCTGAATCCCACAGTGTGTCTGAAATCAGGACATTCTTGACTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CCA 72 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATaGCAATTGCACACACTGGGAAACCTGATGGTCTGG | + |
Preference number: 3 (lower is better) Translates to: HCREQESFLLNL*QLHTLGNLMVW Trigger: CCAGACCATCAGGTTTCCCAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGGAGTGGACACCACTGTaGTCATGGTTGATGGTTCTC | + |
Preference number: 3 (lower is better) Translates to: HCREQESFLLNLWQLHTLEWTPL*SWLMVL Trigger: GAGAACCATCAACCATGACAACAGTGGTGTCCACTC...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCACAGACATGTTGTTTCTaGCTGGCCAAAAAGGGAAAG | + |
Preference number: 3 (lower is better) Translates to: ARLFTLQGTRVLPSESMAQTCCF*LAKKGK Trigger: CTTTCCCTTTTTGGCCAGCAAGAAACAACATGTCTG...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTTCCCTTCCTGTTTCTaGGGGACAAGTGGAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCFPSCF*GTSGER Trigger: TCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCAACCCCATGAGCACCTaGCTACAGGTCAGTCAAGAA | + |
Preference number: 3 (lower is better) Translates to: LYPSRRYWKDFRKADFGSNPMST*LQVSQE Trigger: TTCTTGACTGACCTGTAGCAAGGTGCTCATGGGGTT...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTATCTGGGCAGACATGTaGTTTCTTGCTGGCCAAAAA | + |
Preference number: 3 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCIWADM*FLAGQK Trigger: TTTTTGGCCAGCAAGAAACAACATGTCTGCCCAGAT...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR-3UTR CAA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAATCTGGGCAGACATGTaGTTTCTTGCTGGCCAAAAA | + |
Preference number: 3 (lower is better) Translates to: RYKWSMCSGSVVMRESYSIWADM*FLAGQK Trigger: TTTTTGGCCAGCAAGAAACAACATGTCTGCCCAGAT...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTAGGAAGCGCCTATGCTaGTACCAGATCCCTAGCCCA | + |
Preference number: 3 (lower is better) Translates to: KQLYPSRRYWKDFRKADFRKRLC*YQIPSP Trigger: TGGGCTAGGGATCTGGTACAAGCATAGGCGCTTCCT...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR-3UTR CAA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCCTCTTCAACATTTTCTaGTTTCCATTTCCTCCAGTT | + |
Preference number: 3 (lower is better) Translates to: LYPSRRYWKDFRKADFGSLFNIF*FPFPPV Trigger: AACTGGAGGAAATGGAAACAAGAAAATGTTGAAGAG...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
3UTR CAA 72 bp | CTTCCCAGGGAGGCGGCTCCGTGTCGGCAGCGCTTGTaGAGCATGCTGGCTGCCGGGTGCCAGGTGGCCGTG | + |
Preference number: 4 (lower is better) Translates to: LPREAAPCRQRL*SMLAAGCQVAV Trigger: CACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTGGGAAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
3UTR CAA 72 bp | TTGCTTCCCAGGGAGGCGGCTCCGTGTCGGCAGCGCTaGTTGAGCATGCTGGCTGCCGGGTGCCAGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: LLPREAAPCRQR*LSMLAAGCQVA Trigger: GGCCACCTGGCACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGGAGCCGCCTCCCTGGGAAGCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
||
CDS-3UTR CCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAAGAGGCGCCCACAGCTaGCCACGAGGGAGACCCGGC | + |
Preference number: 4 (lower is better) Translates to: RDAVCLHREDPGGPPGSPRGAHS*PRGRPG Trigger: GCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCT...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
CDS-3UTR TCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCGTCGGCAGCGCTTGTTaGGCATGCTGGCTGCCGGGT | + |
Preference number: 4 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTVGSAC*ACWLPG Trigger: ACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGAC...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
CDS-3UTR CCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTCTGAAAGCTGGCAGGTaGGGCCGGCGCTCTGGCATC | + |
Preference number: 4 (lower is better) Translates to: LAGDRGQVLCAPVEGRARLKAGR*GRRSGI Trigger: GATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAG...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
||
CDS-3UTR CCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCACTGAAAGCTGGCAGGTaGGGCCGGCGCTCTGGCATC | + |
Preference number: 4 (lower is better) Translates to: RDAVCLHREDPGGPPGSPLKAGR*GRRSGI Trigger: GATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAG...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGAGGCGCCCACAGCTaGCCACGAGGGAGACCCGGC | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRRGAHS*PRGRPG Trigger: GCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCT...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGAATCGGGGCCGAGTCCTaGAAGCTGGCAGGTGGGGCC | + |
Preference number: 4 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGIGAES*KLAGGA Trigger: GGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGAT...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGATCGGGGCCGAGTCCTaGAAGCTGGCAGGTGGGGCC | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRIGAES*KLAGGA Trigger: GGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGAT...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCCCCCACAGCGTAGATaGGCCCAGCGATGGACGTGC | + |
Preference number: 4 (lower is better) Translates to: VFWSTTASSERTLPWKEAPPQRR*AQRWTC Trigger: GCACGTCCATCGCTGGGCTCATCTACGCTGTGGGGG...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTGCCATCGTGGCCTCCTaGCACATATATCCTGCCCTC | + |
Preference number: 4 (lower is better) Translates to: LAGDRGQVLCAPVEGRARAIVAS*HIYPAL Trigger: GAGGGCAGGATATATGTGTCAGGAGGCCACGATGGC...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAGCCATCGTGGCCTCCTaGCACATATATCCTGCCCTC | + |
Preference number: 4 (lower is better) Translates to: RDAVCLHREDPGGPPGSPAIVAS*HIYPAL Trigger: GAGGGCAGGATATATGTGTCAGGAGGCCACGATGGC...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CTTCGGGCTGTTGTCATGGGATGGCACTTTTCCCAGCGATTGGCGATAGGGTCGCAGCTCGGGCAGGCATaGTCCCCTCTGCTCCCGGTC | + |
Preference number: 4 (lower is better) Translates to: LRAVVMGWHFSQRLAIGSQLGQA*SPLLPV Trigger: GACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTG...CGACCCTATCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR TCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGCCCCCACAGCGTAGATaGGCCCAGCGATGGACGTGC | + |
Preference number: 4 (lower is better) Translates to: LPSALVRDSLPLGPSVLWPPQRR*AQRWTC Trigger: GCACGTCCATCGCTGGGCTCATCTACGCTGTGGGGG...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGGTCGGCAGCGCTTGTTaGGCATGCTGGCTGCCGGGT | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRVGSAC*ACWLPG Trigger: ACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGAC...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGTGTGCATGGGTACTATaGGACACCACTGGTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: SAGRPPAHECSLWQGGAGCAWVL*DTTGLP Trigger: TGGCAGACCAGTGGTGTCTCATAGTACCCATGCACA...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCATTGATGCTCTGCAGCTaGAGGAAGCTTGCCCCCATC | + |
Preference number: 4 (lower is better) Translates to: RDAVCLHREDPGGPPGSPLMLCS*RKLAPI Trigger: GATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAA...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GGCTGCAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCTTGATGCTCTGCAGCTaGAGGAAGCTTGCCCCCATC | + |
Preference number: 4 (lower is better) Translates to: GCRRREGSAGRPPAHECSLMLCS*RKLAPI Trigger: GATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAA...GGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CCAGTGCTGCAGCAGGTGTTCGCTGGGCTTGGATGGAGCCTGTGTGCCTGGACCTTGATGCTCTGCAGCTaGAGGAAGCTTGCCCCCATC | + |
Preference number: 4 (lower is better) Translates to: PVLQQVFAGLGWSLCAWTLMLCS*RKLAPI Trigger: GATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAA...GGTCCAGGCACACAGGCTCCATCCAAGCCCAGCGAACACCTGCTGCAGCACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTGAGGCAGGCGGATATTaGACAGCAGCTCGGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCEAGGY*TAARAG Trigger: GCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTC...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | GGGAGATGGCGTATCATCTCTAGGGATGCAGTCTGCTaGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGC | + |
Preference number: 4 (lower is better) Translates to: GRWRIISRDAVC*HREDPGGPPGS Trigger: GCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCTAGAGATGATACGCCATCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GGCTGCAGGAGAAGGGAAGGCTCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCTGTGCATGGGTACTATaGGACACCACTGGTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: GCRRREGSAGRPPAHECSCAWVL*DTTGLP Trigger: TGGCAGACCAGTGGTGTCTCATAGTACCCATGCACA...GGAGCACTCATGGGCAGGAGGTCTTCCAGCCGAGCCTTCCCTTCTCCTGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTTCGCATAGCTTGCCCTaGCGCCGGATCTCCTCCATG | + |
Preference number: 4 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCSHSLP*RRISSM Trigger: CATGGAGGAGATCCGGCGGCAGGGCAAGCTATGCGA...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR GCA 90 bp | AGCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTCACGTCGCATAGCTTaGCCTGCCGCCGGATCTCCT | + |
Preference number: 4 (lower is better) Translates to: SKALPCYWLWDPRGTPVLSRRIA*PAAGSP Trigger: AGGAGATCCGGCGGCAGGGCAAGCTATGCGACGTGA...CAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR GCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCAGCTGCAGGAAGCTTaGCCCCATCAGCAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: VFWSTTASSERTLPWKEAQLQEA*PHQQGL Trigger: CAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTG...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGCAGCTGCAGGAAGCTTaGCCCCATCAGCAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: SQHASCCSCTTTGSDNTRQLQEA*PHQQGL Trigger: CAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTG...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTCCTGACCCAGGCCAATaGAGCTTCAAAAACCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LAGDRGQVLCAPVEGRARPDPGQ*SFKNLL Trigger: GAGCAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGG...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCTGTAGGCCTCCACGGTaGTCAGCCGCAACTGACCAT | + |
Preference number: 4 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPCRPPR*SAATDH Trigger: ATGGTCAGTTGCGGCTGAGCACCGTGGAGGCCTACA...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTATGCTGGCTGCCGGGTaGCAGGTGGCCGTGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLMLAAG*QVAVWW Trigger: CCACCACACGGCCACCTGGCACCCGGCAGCCAGCAT...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGCAGCTCGGGCAGGCATaGTCCCCTCTGCTCCCGGTC | + |
Preference number: 4 (lower is better) Translates to: GRRSIESLHEVICQDQGKQLGQA*SPLLPV Trigger: GACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTG...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGAGAGGCAGGCGGATATTaGACAGCAGCTCGGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGEAGGY*TAARAG Trigger: GCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTC...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGGAGGCAGGCGGATATTaGACAGCAGCTCGGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: LPSALVRDSLPLGPSVLWEAGGY*TAARAG Trigger: GCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTC...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCGAGGCAGGCGGATATTaGACAGCAGCTCGGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: LLAKKGKDVRGSGDLWEREAGGY*TAARAG Trigger: GCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTC...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTGCACGACTGTCCCCATaGCACTTCGCTTGCTATTCA | + |
Preference number: 4 (lower is better) Translates to: LAGDRGQVLCAPVEGRARARLSP*HFACYS Trigger: TGAATAGCAAGCGAAGTGCCATGGGGACAGTCGTGC...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TCGGCTGGAAGACCTCCTGCCCATGAGTGCTCCCTGTGGCAAGGGGGAGCTGGGACTATGAGACACCACTaGTCTGCCACAGAGCTGTAC | + |
Preference number: 4 (lower is better) Translates to: SAGRPPAHECSLWQGGAGTMRHH*SATELY Trigger: GTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGT...CCCAGCTCCCCCTTGCCACAGGGAGCACTCATGGGCAGGAGGTCTTCCAGCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTAGAGGCGCCCACAGCTaGCCACGAGGGAGACCCGGC | + |
Preference number: 4 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSRGAHS*PRGRPG Trigger: GCCGGGTCTCCCTCGTGGCCAGCTGTGGGCGCCTCT...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | CGTTCACCACAGCCACACCCACACGGCTTCGGGCTGTaGTCATGGGATGGCACTTTTCCCAGCGATTGGCGA | + |
Preference number: 4 (lower is better) Translates to: RSPQPHPHGFGL*SWDGTFPSDWR Trigger: TCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAAGCCGTGTGGGTGTGGCTGTGGTGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR TCA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCAGGTCCCTGCATTTGTaGCAGCACCGTACCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPRSLHL*QHRTRS Trigger: TGACCTGGTACGGTGCTGTCACAAATGCAGGGACCT...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGTCGCATAGCTTGCCCTaGCGCCGGATCTCCTCCATG | + |
Preference number: 4 (lower is better) Translates to: EPSSRPIQAGSRGQETNQSHSLP*RRISSM Trigger: CATGGAGGAGATCCGGCGGCAGGGCAAGCTATGCGA...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR GCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGTCACGTCGCATAGCTTaGCCTGCCGCCGGATCTCCT | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRSRRIA*PAAGSP Trigger: AGGAGATCCGGCGGCAGGGCAAGCTATGCGACGTGA...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR TCA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGCGATCCGGTGAGCACTaGACTTGTGGTCCCCAATCT | + |
Preference number: 4 (lower is better) Translates to: SQHASCCSCTTTGSDNTRRSGEH*TCGPQS Trigger: AGATTGGGGACCACAAGTTCAGTGCTCACCGGATCG...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR TCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTCCCCCACAGCGTAGATaGGCCCAGCGATGGACGTGC | + |
Preference number: 4 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSPPQRR*AQRWTC Trigger: GCACGTCCATCGCTGGGCTCATCTACGCTGTGGGGG...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAACATCTCAGCAATACTaGGGAAGCCAGAGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: RDAVCLHREDPGGPPGSPTSQQY*GSQSHH Trigger: ATGATGGCTCTGGCTTCCTCAGTATTGCTGAGATGT...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CTCCTGACACATATATCCTGCCCTCAAAGACTGTCACCCCAGCAGCACTCCGGTTCGCATAGCTTGCCCTaGCGCCGGATCTCCTCCATG | + |
Preference number: 4 (lower is better) Translates to: LLTHISCPQRLSPQQHSGSHSLP*RRISSM Trigger: CATGGAGGAGATCCGGCGGCAGGGCAAGCTATGCGA...ACCGGAGTGCTGCTGGGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR GCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCTGTAGGCCTCCACGGTaGTCAGCCGCAACTGACCAT | + |
Preference number: 4 (lower is better) Translates to: LLAKKGKDVRGSGDLWERCRPPR*SAATDH Trigger: ATGGTCAGTTGCGGCTGAGCACCGTGGAGGCCTACA...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGTGTAGGCCTCCACGGTaGTCAGCCGCAACTGACCAT | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRCRPPR*SAATDH Trigger: ATGGTCAGTTGCGGCTGAGCACCGTGGAGGCCTACA...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGCACAGACAAACATCTTaGTTCCCAGGGAGGCGGCTC | + |
Preference number: 4 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGHRQTS*FPGRRL Trigger: GAGCCGCCTCCCTGGGAAGCAAGATGTTTGTCTGTG...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTTTCGTAAACATAGCATaGAAGTACGGGATGGAGGCC | + |
Preference number: 4 (lower is better) Translates to: LAGDRGQVLCAPVEGRARFVNIA*KYGMEA Trigger: GGCCTCCATCCCGTACTTCCATGCTATGTTTACGAA...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR CCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCACAGCTCGGGCAGGCATaGTCCCCTCTGCTCCCGGTC | + |
Preference number: 4 (lower is better) Translates to: ARLFTLQGTRVLPSESMAQLGQA*SPLLPV Trigger: GACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTG...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | TGCCCTCAAAGACTGTCACCCCAGCAGCACTCCGGTTaGAGCTCATCGGAGTCACCACTGTCCACTTGTCCG | + |
Preference number: 4 (lower is better) Translates to: CPQRLSPQQHSG*SSSESPLSTCP Trigger: CGGACAAGTGGACAGTGGTGACTCCGATGAGCTCAAACCGGAGTGCTGCTGGGGTGACAGTCTTTGAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR TCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCCGATCCGGTGAGCACTaGACTTGTGGTCCCCAATCT | + |
Preference number: 4 (lower is better) Translates to: LLAKKGKDVRGSGDLWERRSGEH*TCGPQS Trigger: AGATTGGGGACCACAAGTTCAGTGCTCACCGGATCG...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR TCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTCAAAGTGCTGGTGGATaGAGCTGTTGGCTGCATCGT | + |
Preference number: 4 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCQSAGG*SCWLHR Trigger: ACGATGCAGCCAACAGCTTCATCCACCAGCACTTTG...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLAPGHT*PRPMQL Trigger: AAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGC...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGGTGCTCAGCCGCAACTaGCCATCATATCCCCCGATA | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRVLSRN*PSYPPI Trigger: TATCGGGGGATATGATGGTCAGTTGCGGCTGAGCAC...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTCTTGTCCGTCTCAGGTaGGTAGGTCTCCACAGAGTT | + |
Preference number: 4 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCLVRLR*VGLHRV Trigger: AACTCTGTGGAGACCTACTCACCTGAGACGGACAAG...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGCAGCTGCAGGAAGCTTaGCCCCATCAGCAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: GRRSIESLHEVICQDQGKQLQEA*PHQQGL Trigger: CAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTG...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCCATGGCACTTCGCTTaGTATTCATGCTCCCCACTC | + |
Preference number: 4 (lower is better) Translates to: VFWSTTASSERTLPWKEAPWHFA*YSCSPL Trigger: GAGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGG...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAAATGCTGGCTGCCGGGTaGCAGGTGGCCGTGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKMLAAG*QVAVWW Trigger: CCACCACACGGCCACCTGGCACCCGGCAGCCAGCAT...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAGTTGAGCATGCTGGCTaGCGGGTGCCAGGTGGCCGT | + |
Preference number: 4 (lower is better) Translates to: ARLFTLQGTRVLPSESMAVEHAG*RVPGGR Trigger: ACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAAC...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGCACAGACAAACATCTTaGTTCCCAGGGAGGCGGCTC | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRHRQTS*FPGRRL Trigger: GAGCCGCCTCCCTGGGAAGCAAGATGTTTGTCTGTG...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAACCGAGTCCTGAAAGCTaGCAGGTGGGGCCGGCGCTC | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKPSPES*QVGPAL Trigger: GAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGG...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | AGCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTTCGGGCTGTTGTCATaGGATGGCACTTTTCCCAGC | + |
Preference number: 4 (lower is better) Translates to: SKALPCYWLWDPRGTPVLFGLLS*DGTFPS Trigger: GCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAA...CAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTGCACGACTGTCCCCATaGCACTTCGCTTGCTATTCA | + |
Preference number: 4 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCARLSP*HFACYS Trigger: TGAATAGCAAGCGAAGTGCCATGGGGACAGTCGTGC...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGGCACGACTGTCCCCATaGCACTTCGCTTGCTATTCA | + |
Preference number: 4 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGARLSP*HFACYS Trigger: TGAATAGCAAGCGAAGTGCCATGGGGACAGTCGTGC...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGCAAAGTGCTGGTGGATaGAGCTGTTGGCTGCATCGT | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRQSAGG*SCWLHR Trigger: ACGATGCAGCCAACAGCTTCATCCACCAGCACTTTG...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: SCWREGGRTPRVGKWMENAPGHT*PRPMQL Trigger: AAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGC...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGACTTGTCCGTCTCAGGTaGGTAGGTCTCCACAGAGTT | + |
Preference number: 4 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGLVRLR*VGLHRV Trigger: AACTCTGTGGAGACCTACTCACCTGAGACGGACAAG...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGGCCATCGTGGCCTCCTaGCACATATATCCTGCCCTC | + |
Preference number: 4 (lower is better) Translates to: GRRSIESLHEVICQDQGKAIVAS*HIYPAL Trigger: GAGGGCAGGATATATGTGTCAGGAGGCCACGATGGC...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCTGTGCATGGGTACTATaGGACACCACTGGTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: LLAKKGKDVRGSGDLWERCAWVL*DTTGLP Trigger: TGGCAGACCAGTGGTGTCTCATAGTACCCATGCACA...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGGGATGCAGTCTGCTTGCATCGTGAGGACCCAGGAGGCCCACCTGGGAGCCCAATTACAATCTCATCCTaGTTGCACTCCATCATGTCG | + |
Preference number: 4 (lower is better) Translates to: RDAVCLHREDPGGPPGSPITISS*LHSIMS Trigger: CGACATGATGGAGTGCAAGCAGGATGAGATTGTAAT...TGGGCTCCCAGGTGGGCCTCCTGGGTCCTCACGATGCAAGCAGACTGCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGTTCGCTTGCTATTCATaGTCCCCACTCGGGTCCATG | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRFACYS*SPLGSM Trigger: CATGGACCCGAGTGGGGAGCATGAATAGCAAGCGAA...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCGTTGAGCATGCTGGCTaGCGGGTGCCAGGTGGCCGT | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRVEHAG*RVPGGR Trigger: ACGGCCACCTGGCACCCGGCAGCCAGCATGCTCAAC...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGGAGACACCACTGGTCTaGCACAGAGCTGTACATCTC | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRETPLV*HRAVHL Trigger: GAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTC...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGATCGTCTCGGCAAACTaGCGCACACCCAGGCAATTT | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRIVSAN*RTPRQF Trigger: AAATTGCCTGGGTGTGCGCCAGTTTGCCGAGACGAT...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGATCGTCTCGGCAAACTaGCGCACACCCAGGCAATTT | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRIVSAN*RTPRQF Trigger: AAATTGCCTGGGTGTGCGCCAGTTTGCCGAGACGAT...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGCAGCTCGGGCAGGCATaGTCCCCTCTGCTCCCGGTC | + |
Preference number: 4 (lower is better) Translates to: HCREQESFLLNLWQLHTLQLGQA*SPLLPV Trigger: GACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTG...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTCCGAGTCCTGAAAGCTaGCAGGTGGGGCCGGCGCTC | + |
Preference number: 4 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCPSPES*QVGPAL Trigger: GAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGG...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGACTATGAGACACCACTaGTCTGCCACAGAGCTGTAC | + |
Preference number: 4 (lower is better) Translates to: VFWSTTASSERTLPWKEATMRHH*SATELY Trigger: GTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGT...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | CGGGCTGTTGTCATGGGATGGCACTTTTCCCAGCGATaGGCGATAGGGTCGAACACTTCCACCACATTCAGG | + |
Preference number: 4 (lower is better) Translates to: RAVVMGWHFSQR*AIGSNTSTTFR Trigger: CCTGAATGTGGTGGAAGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTGCCATCCCATGACAACAGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR TCA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCAAAAACCTGCTCCTCTaGCTTCACATTCAGCTCATC | + |
Preference number: 4 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPKNLLL*LHIQLI Trigger: GATGAGCTGAATGTGAAGTCAGAGGAGCAGGTTTTT...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGAGGTCCCTGCATTTGTaGCAGCACCGTACCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: GRRSIESLHEVICQDQGKRSLHL*QHRTRS Trigger: TGACCTGGTACGGTGCTGTCACAAATGCAGGGACCT...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTAGGTCTCCACAGAGTTaGGGGAGGAGTTGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLRSPQS*GRSCRH Trigger: ATGACGGCAACTCCTCCCTCAACTCTGTGGAGACCT...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGGTCGGCAGCGCTTGTTaGGCATGCTGGCTGCCGGGT | + |
Preference number: 4 (lower is better) Translates to: HCREQESFLLNLWQLHTLVGSAC*ACWLPG Trigger: ACCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGAC...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGCTTGGGTCCATTCCCTaGATTACAATCTCATCCTGC | + |
Preference number: 4 (lower is better) Translates to: SKALPCYWLWDPRGTPVLLGSIP*ITISSC Trigger: GCAGGATGAGATTGTAATGCAGGGAATGGACCCAAG...CAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GTCTTCTGGTCCACCACTGCCTCTTCTGAGAGGACTCTCCCCTGGAAGGAAGCGCTTGGGTCCATTCCCTaGATTACAATCTCATCCTGC | + |
Preference number: 4 (lower is better) Translates to: VFWSTTASSERTLPWKEALGSIP*ITISSC Trigger: GCAGGATGAGATTGTAATGCAGGGAATGGACCCAAG...CGCTTCCTTCCAGGGGAGAGTCCTCTCAGAAGAGGCAGTGGTGGACCAGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGGATGAAGCTGTTGGCTaGATCGTACAACACAGCACA | + |
Preference number: 4 (lower is better) Translates to: SKALPCYWLWDPRGTPVLDEAVG*IVQHST Trigger: TGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATC...CAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGCAGATGATAGTCCTTTaGTTCATCGACCAGGTCCCT | + |
Preference number: 4 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGQMIVL*FIDQVP Trigger: AGGGACCTGGTCGATGAAGCAAAGGACTATCATCTG...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TGCCGTCATAGCCTCCACACACGTAGATCTGTCCATCCAGCACGACTGTCCCCAGACTGCACATTCTGCTaGTCGATAGCAAGGTTGCCA | + |
Preference number: 4 (lower is better) Translates to: CRHSLHTRRSVHPARLSPDCTFC*SIARLP Trigger: TGGCAACCTTGCTATCGACCAGCAGAATGTGCAGTC...TGGGGACAGTCGTGCTGGATGGACAGATCTACGTGTGTGGAGGCTATGACGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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3UTR CAA 72 bp | CATCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTaGGCAAATGGATGGAAAATAGCGGAATGGCAGGGA | + |
Preference number: 4 (lower is better) Translates to: HLAGEKVDGHPG*ANGWKIAEWQG Trigger: TCCCTGCCATTCCGCTATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | CTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTaGGCAGCGGCAGTTGAAGGTCTGCCCCACTGCCCA | + |
Preference number: 4 (lower is better) Translates to: LVATGRILGKQI*AAAVEGLPHCP Trigger: TGGGCAGTGGGGCAGACCTTCAACTGCCGCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | CCGTCTCTGGGTCGTACATCTCCACTGAGCTTAGGTTaGACTGTCCATCGTAACCTCCCACTGCATAGAGGC | + |
Preference number: 4 (lower is better) Translates to: PSLGRTSPLSLG*TVHRNLPLHRG Trigger: GCCTCTATGCAGTGGGAGGTTACGATGGACAGTCAAACCTAAGCTCAGTGGAGATGTACGACCCAGAGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR TCA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTAAAAACCTGCTCCTCTaGCTTCACATTCAGCTCATC | + |
Preference number: 4 (lower is better) Translates to: PPGVSDPPPATFFPVSLGKNLLL*LHIQLI Trigger: GATGAGCTGAATGTGAAGTCAGAGGAGCAGGTTTTT...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAAGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKAPGHT*PRPMQL Trigger: AAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGC...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCATCGGGGCCGAGTCCTaGAAGCTGGCAGGTGGGGCC | + |
Preference number: 4 (lower is better) Translates to: LYPSRRYWKDFRKADFGSIGAES*KLAGGA Trigger: GGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGAT...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAACAGCTGCAGGAAGCTTaGCCCCATCAGCAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKQLQEA*PHQQGL Trigger: CAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTG...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGGACACCTCTACAAAGTaGTGGTGGATGAAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: LPSALVRDSLPLGPSVLWDTSTK*WWMKLL Trigger: CAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTC...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGGCAGCTTCAAAAACCTaGTCCTCTGACTTCACATTC | + |
Preference number: 4 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGAASKT*SSDFTF Trigger: GAATGTGAAGTCAGAGGAGCAGGTTTTTGAAGCTGC...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGCAGATGATAGTCCTTTaGTTCATCGACCAGGTCCCT | + |
Preference number: 4 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRQMIVL*FIDQVP Trigger: AGGGACCTGGTCGATGAAGCAAAGGACTATCATCTG...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGGCAGATGATAGTCCTTTaGTTCATCGACCAGGTCCCT | + |
Preference number: 4 (lower is better) Translates to: NRLLGRSRQAAEGKKPIRQMIVL*FIDQVP Trigger: AGGGACCTGGTCGATGAAGCAAAGGACTATCATCTG...CCTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCCTGACACATATATCCTaGCCTCAAAGACTGTCACCC | + |
Preference number: 4 (lower is better) Translates to: LLAKKGKDVRGSGDLWERLTHIS*PQRLSP Trigger: GGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAG...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCACTGAAAGCTGGCAGGTaGGGCCGGCGCTCTGGCATC | + |
Preference number: 4 (lower is better) Translates to: RYKWSMCSGSVVMRESYSLKAGR*GRRSGI Trigger: GATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAG...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGAAAAACCTGCTCCTCTaGCTTCACATTCAGCTCATC | + |
Preference number: 4 (lower is better) Translates to: LPSALVRDSLPLGPSVLWKNLLL*LHIQLI Trigger: GATGAGCTGAATGTGAAGTCAGAGGAGCAGGTTTTT...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCAPGHT*PRPMQL Trigger: AAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGC...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTCCATGGCACTTCGCTTaGTATTCATGCTCCCCACTC | + |
Preference number: 4 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLPWHFA*YSCSPL Trigger: GAGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGG...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATGAGACACCACTGGTCTaGCACAGAGCTGTACATCTC | + |
Preference number: 4 (lower is better) Translates to: SCWREGGRTPRVGKWMENETPLV*HRAVHL Trigger: GAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTC...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTGAGACACCACTGGTCTaGCACAGAGCTGTACATCTC | + |
Preference number: 4 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLETPLV*HRAVHL Trigger: GAGATGTACAGCTCTGTGGCAGACCAGTGGTGTCTC...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CTCCTGACACATATATCCTGCCCTCAAAGACTGTCACCCCAGCAGCACTCCGGTTTCGTAAACATAGCATaGAAGTACGGGATGGAGGCC | + |
Preference number: 4 (lower is better) Translates to: LLTHISCPQRLSPQQHSGFVNIA*KYGMEA Trigger: GGCCTCCATCCCGTACTTCCATGCTATGTTTACGAA...ACCGGAGTGCTGCTGGGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR CCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTATCGTCTCGGCAAACTaGCGCACACCCAGGCAATTT | + |
Preference number: 4 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSIVSAN*RTPRQF Trigger: AAATTGCCTGGGTGTGCGCCAGTTTGCCGAGACGAT...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCGTGGGGCCGGCGCTCTaGCATCAGATGATAGTCCTT | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRVGPAL*HQMIVL Trigger: AAGGACTATCATCTGATGCCAGAGCGCCGGCCCCAC...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAAGTGGGGCCGGCGCTCTaGCATCAGATGATAGTCCTT | + |
Preference number: 4 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKVGPAL*HQMIVL Trigger: AAGGACTATCATCTGATGCCAGAGCGCCGGCCCCAC...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAAGTGGGGCCGGCGCTCTaGCATCAGATGATAGTCCTT | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKVGPAL*HQMIVL Trigger: AAGGACTATCATCTGATGCCAGAGCGCCGGCCCCAC...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCAGGTCCCTGCATTTGTaGCAGCACCGTACCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRRSLHL*QHRTRS Trigger: TGACCTGGTACGGTGCTGTCACAAATGCAGGGACCT...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCAGGTCTCCACAGAGTTaGGGGAGGAGTTGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRRSPQS*GRSCRH Trigger: ATGACGGCAACTCCTCCCTCAACTCTGTGGAGACCT...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGATTACAATCTCATCCTaGTTGCACTCCATCATGTCG | + |
Preference number: 4 (lower is better) Translates to: EPSSRPIQAGSRGQETNQITISS*LHSIMS Trigger: CGACATGATGGAGTGCAAGCAGGATGAGATTGTAAT...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCATTCGCTTGCTATTCATaGTCCCCACTCGGGTCCATG | + |
Preference number: 4 (lower is better) Translates to: ARLFTLQGTRVLPSESMAFACYS*SPLGSM Trigger: CATGGACCCGAGTGGGGAGCATGAATAGCAAGCGAA...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCCACAGACAAACATCTTaGTTCCCAGGGAGGCGGCTC | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRHRQTS*FPGRRL Trigger: GAGCCGCCTCCCTGGGAAGCAAGATGTTTGTCTGTG...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGCGATCCGGTGAGCACTaGACTTGTGGTCCCCAATCT | + |
Preference number: 4 (lower is better) Translates to: HCREQESFLLNLWQLHTLRSGEH*TCGPQS Trigger: AGATTGGGGACCACAAGTTCAGTGCTCACCGGATCG...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR TCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATACATCTCAGCAATACTaGGGAAGCCAGAGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: SCWREGGRTPRVGKWMENTSQQY*GSQSHH Trigger: ATGATGGCTCTGGCTTCCTCAGTATTGCTGAGATGT...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | GAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCAGCTCTCTTCTACATCTCAGCAATACTaGGGAAGCCAGAGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: EGQDSYLVPSEAGLQLSSTSQQY*GSQSHH Trigger: ATGATGGCTCTGGCTTCCTCAGTATTGCTGAGATGT...AGAAGAGAGCTGAAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAACCTGACCCAGGCCAATaGAGCTTCAAAAACCTGCTC | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKPDPGQ*SFKNLL Trigger: GAGCAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGG...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATTTCGTAAACATAGCATaGAAGTACGGGATGGAGGCC | + |
Preference number: 4 (lower is better) Translates to: SCWREGGRTPRVGKWMENFVNIA*KYGMEA Trigger: GGCCTCCATCCCGTACTTCCATGCTATGTTTACGAA...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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3UTR CAA 72 bp | AGTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTaGGGGACAAGTGGAGAAAGACCTCACTGGATTCCC | + |
Preference number: 4 (lower is better) Translates to: SFSRASPFPSCF*GTSGERPHWIP Trigger: GGGAATCCAGTGAGGTCTTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTAGGTCCCTGCATTTGTaGCAGCACCGTACCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: TLQGTRVLPSESMAIAHTRSLHL*QHRTRS Trigger: TGACCTGGTACGGTGCTGTCACAAATGCAGGGACCT...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAGTGCTCAGCCGCAACTaGCCATCATATCCCCCGATA | + |
Preference number: 4 (lower is better) Translates to: RYKWSMCSGSVVMRESYSVLSRN*PSYPPI Trigger: TATCGGGGGATATGATGGTCAGTTGCGGCTGAGCAC...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTGCAGCTTCAAAAACCTaGTCCTCTGACTTCACATTC | + |
Preference number: 4 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLAASKT*SSDFTF Trigger: GAATGTGAAGTCAGAGGAGCAGGTTTTTGAAGCTGC...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTTTCGCTTGCTATTCATaGTCCCCACTCGGGTCCATG | + |
Preference number: 4 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCFACYS*SPLGSM Trigger: CATGGACCCGAGTGGGGAGCATGAATAGCAAGCGAA...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCACTGACACATATATCCTaGCCTCAAAGACTGTCACCC | + |
Preference number: 4 (lower is better) Translates to: ARLFTLQGTRVLPSESMALTHIS*PQRLSP Trigger: GGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAG...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAAGCTGTTGTCATGGGATaGCACTTTTCCCAGCGATTG | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKAVVMG*HFSQRL Trigger: CAATCGCTGGGAAAAGTGCCATCCCATGACAACAGC...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | TGTAAGCCTTTATACCATGACGCCAGCGTTCGTAGCTaGAATGTAAAGGCCCATCTTGCTGGAGAGAAGGTG | + |
Preference number: 4 (lower is better) Translates to: CKPLYHDASVRS*NVKAHLAGEKV Trigger: CACCTTCTCTCCAGCAAGATGGGCCTTTACATTCAAGCTACGAACGCTGGCGTCATGGTATAAAGGCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCAAGGTCTCCACAGAGTTaGGGGAGGAGTTGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPRSPQS*GRSCRH Trigger: ATGACGGCAACTCCTCCCTCAACTCTGTGGAGACCT...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAACTTGGGTCCATTCCCTaGATTACAATCTCATCCTGC | + |
Preference number: 4 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKLGSIP*ITISSC Trigger: GCAGGATGAGATTGTAATGCAGGGAATGGACCCAAG...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAACTTGGGTCCATTCCCTaGATTACAATCTCATCCTGC | + |
Preference number: 4 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKLGSIP*ITISSC Trigger: GCAGGATGAGATTGTAATGCAGGGAATGGACCCAAG...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCGATGAAGCTGTTGGCTaGATCGTACAACACAGCACA | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRDEAVG*IVQHST Trigger: TGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATC...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AGACAGATCAGCCATCGCCCTCAGACAGGGGAGTATAAAAATGTTTCTGTTCGCGACACCTCTACAAAGTaGTGGTGGATGAAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: RQISHRPQTGEYKNVSVRDTSTK*WWMKLL Trigger: CAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTC...GCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGCGATGGCTGATCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAACTGACACATATATCCTaGCCTCAAAGACTGTCACCC | + |
Preference number: 4 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKLTHIS*PQRLSP Trigger: GGGTGACAGTCTTTGAGGGCAGGATATATGTGTCAG...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | CATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGGACTGCACATTCTGCTaGTCGATAGCAAGGTTGCCA | + |
Preference number: 4 (lower is better) Translates to: HCREQESFLLNLWQLHTLDCTFC*SIARLP Trigger: TGGCAACCTTGCTATCGACCAGCAGAATGTGCAGTC...CAGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTTTCGGGCTGTTGTCATaGGATGGCACTTTTCCCAGC | + |
Preference number: 4 (lower is better) Translates to: TLQGTRVLPSESMAIAHTFGLLS*DGTFPS Trigger: GCTGGGAAAAGTGCCATCCCATGACAACAGCCCGAA...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR TCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCCTTGTCCGTCTCAGGTaGGTAGGTCTCCACAGAGTT | + |
Preference number: 4 (lower is better) Translates to: LYPSRRYWKDFRKADFGSLVRLR*VGLHRV Trigger: AACTCTGTGGAGACCTACTCACCTGAGACGGACAAG...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTGACACCTCTACAAAGTaGTGGTGGATGAAGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCDTSTK*WWMKLL Trigger: CAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTC...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAAGCAGCTTCAAAAACCTaGTCCTCTGACTTCACATTC | + |
Preference number: 4 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKAASKT*SSDFTF Trigger: GAATGTGAAGTCAGAGGAGCAGGTTTTTGAAGCTGC...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGTGTGTCAGATGATAGTCCTTTaGTTCATCGACCAGGTCCCT | + |
Preference number: 4 (lower is better) Translates to: WEWTPLLSWLMVLHVNVCQMIVL*FIDQVP Trigger: AGGGACCTGGTCGATGAAGCAAAGGACTATCATCTG...ACACACATTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCAACTATGAGACACCACTaGTCTGCCACAGAGCTGTAC | + |
Preference number: 4 (lower is better) Translates to: RYKWSMCSGSVVMRESYSTMRHH*SATELY Trigger: GTACAGCTCTGTGGCAGACCAGTGGTGTCTCATAGT...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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3UTR CAA 72 bp | TTTCAAGTGCTTAGAGCAGAGGCCCGGCTCTTTACATaGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATG | + |
Preference number: 4 (lower is better) Translates to: FQVLRAEARLFT*QGTRVLPSESM Trigger: CATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGCCTCTGCTCTAAGCACTTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | GTTTCTCTCGAGCATCTCCATTCCCTTCCTGTTTCTTGGGGACAAGTGGAGAAAATTACAATCTCATCCTaGTTGCACTCCATCATGTCG | + |
Preference number: 4 (lower is better) Translates to: VSLEHLHSLPVSWGQVEKITISS*LHSIMS Trigger: CGACATGATGGAGTGCAAGCAGGATGAGATTGTAAT...TTTCTCCACTTGTCCCCAAGAAACAGGAAGGGAATGGAGATGCTCGAGAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGATGAAGCTGTTGGCTaGATCGTACAACACAGCACA | + |
Preference number: 4 (lower is better) Translates to: TLQGTRVLPSESMAIAHTDEAVG*IVQHST Trigger: TGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATC...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCGCTGTTGTCATGGGATaGCACTTTTCCCAGCGATTG | + |
Preference number: 4 (lower is better) Translates to: LYPSRRYWKDFRKADFGSAVVMG*HFSQRL Trigger: CAATCGCTGGGAAAAGTGCCATCCCATGACAACAGC...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTTTGATGCTCTGCAGCTaGAGGAAGCTTGCCCCCATC | + |
Preference number: 4 (lower is better) Translates to: KQLYPSRRYWKDFRKADFLMLCS*RKLAPI Trigger: GATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAA...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | TTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTGGCAGCATTACAATCTCATCCTaGTTGCACTCCATCATGTCG | + |
Preference number: 4 (lower is better) Translates to: LYPSRRYWKDFRKADFGSITISS*LHSIMS Trigger: CGACATGATGGAGTGCAAGCAGGATGAGATTGTAAT...GCTGCCAAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR GCA 90 bp | AAACAATTATATCCTTCTCGTCGCTACTGGAAGGATTTTAGGAAAGCAGATTTTCCTGACCCAGGCCAATaGAGCTTCAAAAACCTTTCT | + |
Preference number: 4 (lower is better) Translates to: KQLYPSRRYWKDFRKADFPDPGQ*SFKNLS Trigger: AGAAAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGG...AAAATCTGCTTTCCTAAAATCCTTCCAGTAGCGACGAGAAGGATATAATTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR CAA 90 bp | CTTGCTGGAGACAGGGGCCAAGTCCTCTGTGCCCCTGTCGAAGGGAGAGCCCGTTGTCGGCAGCGCTTGTaGAGCATGCTGGCTGCCGGG | + |
Preference number: 5 (lower is better) Translates to: LAGDRGQVLCAPVEGRARCRQRL*SMLAAG Trigger: CCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACA...ACGGGCTCTCCCTTCGACAGGGGCACAGAGGACTTGGCCCCTGTCTCCAGCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS CCA 90 bp | CCGGCAAAGAGGCAGGCGGATATTGGACAGCAGCTCGGGCAGGCATaGTCCCCTCTGCTCCCGGTCATACCTGACCCAGGCCAATGCAGC | + |
Preference number: 5 (lower is better) Translates to: PAKRQADIGQQLGQA*SPLLPVIPDPGQCS Trigger: GCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CCA 90 bp | GAGCCCAGCGATGGACGTGCAGCATCGGGGCCGAGTCCTGAAAGCTaGCAGGTGGGGCCGGCGCTCTGGCATCAGATGATAGTCCTTTGC | + |
Preference number: 5 (lower is better) Translates to: EPSDGRAASGPSPES*QVGPALWHQMIVLC Trigger: GCAAAGGACTATCATCTGATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGATGCTGCACGTCCATCGCTGGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS-3UTR CAA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCGTCACGTCGCATAGCTaGCCCTGCCGCCGGATCTCC | + |
Preference number: 5 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPVTSHS*PCRRIS Trigger: GGAGATCCGGCGGCAGGGCAAGCTATGCGACGTGAC...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR CAA 90 bp | GAGCCCGTTCACCACAGCCACACCCACACGGCTTCGGGCTGTTGTCATGGGATGGCAGCTGCAGGAAGCTaGCCCCCATCAGCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: EPVHHSHTHTASGCCHGMAAAGS*PPSAGT Trigger: AGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGC...CATCCCATGACAACAGCCCGAAGCCGTGTGGGTGTGGCTGTGGTGAACGGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR CAA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCTGTCGGCAGCGCTTGTaGAGCATGCTGGCTGCCGGG | + |
Preference number: 5 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPCRQRL*SMLAAG Trigger: CCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACA...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTCACGTCGCATAGCTaGCCCTGCCGCCGGATCTCC | + |
Preference number: 5 (lower is better) Translates to: SQHASCCSCTTTGSDNTRVTSHS*PCRRIS Trigger: GGAGATCCGGCGGCAGGGCAAGCTATGCGACGTGAC...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR CAA 90 bp | GCAAAGCACTTCCGTGTTACTGGCTGTGGGACCCCAGAGGGACTCCTGTCCTGTCCGTGTCGGCAGCGCTaGTTGAGCATGCTGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: AKHFRVTGCGTPEGLLSCPCRQR*LSMLAA Trigger: GGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGG...ACAGGACAGGAGTCCCTCTGGGGTCCCACAGCCAGTAACACGGAAGTGCTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS GCA 90 bp | GGCAGGCGGATATTGGACAGCAGCTCGGGCAGGCATGGTCCCCTCTaGTCCCGGTCATACCTGACCCAGGCCAATGCAGCTTCAAAAACC | + |
Preference number: 5 (lower is better) Translates to: GRRILDSSSGRHGPL*SRSYLTQANAASKT Trigger: GGTTTTTGAAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CCA 90 bp | CTCGATCTGATAAGAACTGGGGCCGGCAAAGAGGCAGGCGGATATTaGACAGCAGCTCGGGCAGGCATGGTCCCCTCTGCTCCCGGTCAT | + |
Preference number: 5 (lower is better) Translates to: LDLIRTGAGKEAGGY*TAARAGMVPSAPGH Trigger: ATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGGCCCCAGTTCTTATCAGATCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS-3UTR CAA 90 bp | TTGAAGGTCTGCCCCACTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGAGAGGCAGGCGGATATaGGACAGCAGCTCGGGCAGG | + |
Preference number: 5 (lower is better) Translates to: LKVCPTAQCTGKRQSPSGRGRRI*DSSSGR Trigger: CCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCT...CCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAGTGGGGCAGACCTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGACCGTGTCGGCAGCGCTaGTTGAGCATGCTGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGPCRQR*LSMLAA Trigger: GGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGG...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCAGAGGCAGGCGGATATaGGACAGCAGCTCGGGCAGG | + |
Preference number: 5 (lower is better) Translates to: LLAKKGKDVRGSGDLWERRGRRI*DSSSGR Trigger: CCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCT...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | TCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGAGGAAGAGGCAGGCGGATATaGGACAGCAGCTCGGGCAGG | + |
Preference number: 5 (lower is better) Translates to: SPSGSFCAMVRSHPEGGGRGRRI*DSSSGR Trigger: CCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCT...TCCTCCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS TCA 90 bp | ACAGCAGCTCGGGCAGGCATGGTCCCCTCTGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTTCAAAAACCTGCTCCTCTGACTTCA | + |
Preference number: 5 (lower is better) Translates to: TAARAGMVPSAPGHT*PRPMQLQKPAPLTS Trigger: TGAAGTCAGAGGAGCAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS TCA 90 bp | ACAGCAGCTCGGGCAGGCATGGTCCCCTCTGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTTCAAAAACCTTTCTCGGAGGAACGT | + |
Preference number: 5 (lower is better) Translates to: TAARAGMVPSAPGHT*PRPMQLQKPFSEER Trigger: ACGTTCCTCCGAGAAAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS GCA 90 bp | AGCTGGCAGGTGGGGCCGGCGCTCTGGCATCAGATGATAGTCCTTTaGTTCATCGACCAGGTCCCTGCATTTGTGACAGCACCGTACCAG | + |
Preference number: 5 (lower is better) Translates to: SWQVGPALWHQMIVL*FIDQVPAFVTAPYQ Trigger: CTGGTACGGTGCTGTCACAAATGCAGGGACCTGGTCGATGAAGCAAAGGACTATCATCTGATGCCAGAGCGCCGGCCCCACCTGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CCA 90 bp | CAGCACCGTACCAGGTCATCTTGCTGCACTCGATCTGATAAGAACTaGGGCCGGCAAAGAGGCAGGCGGATATTGGACAGCAGCTCGGGC | + |
Preference number: 5 (lower is better) Translates to: QHRTRSSCCTRSDKN*GRQRGRRILDSSSG Trigger: GCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGGCCCCAGTTCTTATCAGATCGAGTGCAGCAAGATGACCTGGTACGGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS-3UTR CAA 90 bp | TCGCAGCATGCTAGCTGCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGCAGCAAGCATCTTaGATGCTCTGCAGCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: SQHASCCSCTTTGSDNTRVQQAS*MLCSCR Trigger: CCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCAC...CCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGCAGCTAGCATGCTGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | GCTGTAGCTGCACCACCACAGGCAGTGACAACACCAGGGTGTCCCTTCTCTCCCCACTTTTCCCAGCGATaGGCGATAGGGTCGAACACT | + |
Preference number: 5 (lower is better) Translates to: AVAAPPQAVTTPGCPFSPHFSQR*AIGSNT Trigger: AGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTG...GGGAGAGAAGGGACACCCTGGTGTTGTCACTGCCTGTGGTGGTGCAGCTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | TCTTGCTGGAGAGAAGGTGGACGGACACCCAGGGTTGGCAAATGGATGGAAAATCCGTGTCGGCAGCGCTaGTTGAGCATGCTGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: SCWREGGRTPRVGKWMENPCRQR*LSMLAA Trigger: GGCAGCCAGCATGCTCAACAAGCGCTGCCGACACGG...ATTTTCCATCCATTTGCCAACCCTGGGTGTCCGTCCACCTTCTCTCCAGCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS GCA 90 bp | CTTTCTCGGAGGAACGTGCAGCAAGCATCTTTGATGCTCTGCAGCTaGAGGAAGCTTGCCCCCATCAGCAGGGACTGCACATTCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: LSRRNVQQASLMLCS*RKLAPISRDCTFCW Trigger: CCAGCAGAATGTGCAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCTCCGAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS GCA 90 bp | CAGGCATGGTCCCCTCTGCTCCCGGTCATACCTGACCCAGGCCAATaGAGCTTCAAAAACCTTTCTCGGAGGAACGTGCAGCAAGCATCT | + |
Preference number: 5 (lower is better) Translates to: QAWSPLLPVIPDPGQ*SFKNLSRRNVQQAS Trigger: AGATGCTTGCTGCACGTTCCTCCGAGAAAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR CAA 90 bp | GCCCGGCTCTTTACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAGTCACGTCGCATAGCTaGCCCTGCCGCCGGATCTCC | + |
Preference number: 5 (lower is better) Translates to: ARLFTLQGTRVLPSESMAVTSHS*PCRRIS Trigger: GGAGATCCGGCGGCAGGGCAAGCTATGCGACGTGAC...TGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGTAAAGAGCCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR CAA 90 bp | TTGCTGGCCAAAAAGGGAAAGGATGTACGTGGGAGTGGGGATCTGTGGGAGCGCGTGCAGCAAGCATCTTaGATGCTCTGCAGCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: LLAKKGKDVRGSGDLWERVQQAS*MLCSCR Trigger: CCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCAC...GCGCTCCCACAGATCCCCACTCCCACGTACATCCTTTCCCTTTTTGGCCAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | ACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTAAGGTCCCATCCAGAGGGAGGGTGCAGCAAGCATCTTaGATGCTCTGCAGCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: TVSLWVLLCYGKVPSRGRVQQAS*MLCSCR Trigger: CCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCAC...CCTCCCTCTGGATGGGACCTTACCATAGCACAGAAGGACCCAGAGGGAGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | TGGTTCTCAGCACCTTCACAGTCGAGGCTGGGCAGTACATTCACAGAAGGACTTAGAGGCAGGCGGATATaGGACAGCAGCTCGGGCAGG | + |
Preference number: 5 (lower is better) Translates to: WFSAPSQSRLGSTFTEGLRGRRI*DSSSGR Trigger: CCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCT...AAGTCCTTCTGTGAATGTACTGCCCAGCCTCGACTGTGAAGGTGCTGAGAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | CCACCAGGCGTGTCGGACCCACCTCCTGCTACATTCTTTCCAGTGTCCTTGGGTCACTTTTCCCAGCGATaGGCGATAGGGTCGAACACT | + |
Preference number: 5 (lower is better) Translates to: PPGVSDPPPATFFPVSLGHFSQR*AIGSNT Trigger: AGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTG...ACCCAAGGACACTGGAAAGAATGTAGCAGGAGGTGGGTCCGACACGCCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGCCCATGGCACTTCGCTaGCTATTCATGCTCCCCACT | + |
Preference number: 5 (lower is better) Translates to: EPSSRPIQAGSRGQETNQPMALR*LFMLPT Trigger: AGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGGG...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS TCA 90 bp | CATGGAAGTACGGGATGGAGGCCGCTAAGACGATCCGGTGAGCACTaGACTTGTGGTCCCCAATCTTTAGCGTCACGTCGCATAGCTTGC | + |
Preference number: 5 (lower is better) Translates to: HGSTGWRPLRRSGEH*TCGPQSLASRRIAC Trigger: GCAAGCTATGCGACGTGACGCTAAAGATTGGGGACCACAAGTTCAGTGCTCACCGGATCGTCTTAGCGGCCTCCATCCCGTACTTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS GCA 90 bp | GAACGTGCAGCAAGCATCTTTGATGCTCTGCAGCTGCAGGAAGCTTaGCCCCATCAGCAGGGACTGCACATTCTGCTGGTCGATAGCAAG | + |
Preference number: 5 (lower is better) Translates to: ERAASIFDALQLQEA*PHQQGLHILLVDSK Trigger: CTTGCTATCGACCAGCAGAATGTGCAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS TCA 90 bp | GCAGCTTCAAAAACCTTTCTCGGAGGAACGTGCAGCAAGCATCTTTaGTGCTCTGCAGCTGCAGGAAGCTTGCCCCCATCAGCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: AASKTFLGGTCSKHL*CSAAAGSLPPSAGT Trigger: AGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCTCCGAGAAAGGTTTTTGAAGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS GCA 90 bp | AAGGGCAGGGCCAGGAACTCTTCGGACAGAGACACCTCTACAAAGTaGTGGTGGATGAAGCTGTTGGCTGCATCGTACAACACAGCACAC | + |
Preference number: 5 (lower is better) Translates to: KGRARNSSDRDTSTK*WWMKLLAASYNTAH Trigger: GTGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTCTCTGTCCGAAGAGTTCCTGGCCCTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS-3UTR CAA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAAGCAGCTGCAGGAAGCTaGCCCCCATCAGCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKAAAGS*PPSAGT Trigger: AGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGC...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | CTGCCCAGTGCACTGGTAAGAGACAGTCTCCCTCTGGGTCCTTCTGTGCTATGGTGGTGGATGAAGCTGTaGGCTGCATCGTACAACACA | + |
Preference number: 5 (lower is better) Translates to: LPSALVRDSLPLGPSVLWWWMKL*AASYNT Trigger: TGTGTTGTACGATGCAGCCAACAGCTTCATCCACCA...CCATAGCACAGAAGGACCCAGAGGGAGACTGTCTCTTACCAGTGCACTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | GAACCGTCTTCTAGGCCGATCCAGGCAGGCAGCAGAGGGCAAGAAACCAATCAGTGGTGGATGAAGCTGTaGGCTGCATCGTACAACACA | + |
Preference number: 5 (lower is better) Translates to: EPSSRPIQAGSRGQETNQWWMKL*AASYNT Trigger: TGTGTTGTACGATGCAGCCAACAGCTTCATCCACCA...CTGATTGGTTTCTTGCCCTCTGCTGCCTGCCTGGATCGGCCTAGAAGACGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS TCA 90 bp | AACATAGCATGGAAGTACGGGATGGAGGCCGCTAAGACGATCCGGTaGGCACTGAACTTGTGGTCCCCAATCTTTAGCGTCACGTCGCAT | + |
Preference number: 5 (lower is better) Translates to: NIAWKYGMEAAKTIR*ALNLWSPIFSVTSH Trigger: ATGCGACGTGACGCTAAAGATTGGGGACCACAAGTTCAGTGCTCACCGGATCGTCTTAGCGGCCTCCATCCCGTACTTCCATGCTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS GCA 90 bp | AAAAACCTTTCTCGGAGGAACGTGCAGCAAGCATCTTTGATGCTCTaGAGCTGCAGGAAGCTTGCCCCCATCAGCAGGGACTGCACATTC | + |
Preference number: 5 (lower is better) Translates to: KNLSRRNVQQASLML*SCRKLAPISRDCTF Trigger: GAATGTGCAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCTCCGAGAAAGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS-3UTR CAA 90 bp | GCTGTGGGTGAAGAGGGTCAGGATTCCTACTTAGTTCCATCAGAGGCTGGGCTTCACTTTTCCCAGCGATaGGCGATAGGGTCGAACACT | + |
Preference number: 5 (lower is better) Translates to: AVGEEGQDSYLVPSEAGLHFSQR*AIGSNT Trigger: AGTGTTCGACCCTATCGCCAATCGCTGGGAAAAGTG...AAGCCCAGCCTCTGATGGAACTAAGTAGGAATCCTGACCCTCTTCACCCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS CCA 90 bp | AGGGCCAGGAACTCTTCGGACAGAGACACCTCTACAAAGTGCTGGTaGATGAAGCTGTTGGCTGCATCGTACAACACAGCACACATCATC | + |
Preference number: 5 (lower is better) Translates to: RARNSSDRDTSTKCW*MKLLAASYNTAHII Trigger: GATGATGTGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTCTCTGTCCGAAGAGTTCCTGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS-3UTR CAA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCATGTCGGCAGCGCTTGTaGAGCATGCTGGCTGCCGGG | + |
Preference number: 5 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPCRQRL*SMLAAG Trigger: CCCGGCAGCCAGCATGCTCAACAAGCGCTGCCGACA...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | GGGAGGAGGAGCATTGAGTCTCTTCACGAGGTCATTTGCCAAGATCAGGGGAAGCCACTGAGCTTAGGTTaGACTGTCCATCGTAACCTC | + |
Preference number: 5 (lower is better) Translates to: GRRSIESLHEVICQDQGKPLSLG*TVHRNL Trigger: GAGGTTACGATGGACAGTCAAACCTAAGCTCAGTGG...CTTCCCCTGATCTTGGCAAATGACCTCGTGAAGAGACTCAATGCTCCTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS TCA 90 bp | CCAGGAACTCTTCGGACAGAGACACCTCTACAAAGTGCTGGTGGATaGAGCTGTTGGCTGCATCGTACAACACAGCACACATCATCGTCT | + |
Preference number: 5 (lower is better) Translates to: PGTLRTETPLQSAGG*SCWLHRTTQHTSSS Trigger: AGACGATGATGTGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTCTCTGTCCGAAGAGTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS GCA 90 bp | GCCTCCAGGGCACTTGGGTCCATTCCCTGCATTACAATCTCATCCTaGTTGCACTCCATCATGTCGTTCGTAAACATAGCATGGAAGTAC | + |
Preference number: 5 (lower is better) Translates to: ASRALGSIPCITISS*LHSIMSFVNIAWKY Trigger: GTACTTCCATGCTATGTTTACGAACGACATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAGGGAATGGACCCAAGTGCCCTGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS-3UTR CAA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTGTGCAGCAAGCATCTTaGATGCTCTGCAGCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: TLQGTRVLPSESMAIAHTVQQAS*MLCSCR Trigger: CCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCAC...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | CCGAATGTGGGAGTGGACACCACTGTTGTCATGGTTGATGGTTCTCCATGTAAATGGTGGATGAAGCTGTaGGCTGCATCGTACAACACA | + |
Preference number: 5 (lower is better) Translates to: PNVGVDTTVVMVDGSPCKWWMKL*AASYNT Trigger: TGTGTTGTACGATGCAGCCAACAGCTTCATCCACCA...TTTACATGGAGAACCATCAACCATGACAACAGTGGTGTCCACTCCCACATTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | CTTCCTTGCAGCAGCAAAAGACATTTCTTTGTAAGCCTTTATACCATGACGCCACCCATGGCACTTCGCTaGCTATTCATGCTCCCCACT | + |
Preference number: 5 (lower is better) Translates to: LPCSSKRHFFVSLYTMTPPMALR*LFMLPT Trigger: AGTGGGGAGCATGAATAGCAAGCGAAGTGCCATGGG...TGGCGTCATGGTATAAAGGCTTACAAAGAAATGTCTTTTGCTGCTGCAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | ACATTGCAGGGAACAAGAGTCCTTCCTTCTGAATCTATGGCAATTGCACACACTCCACTGAGCTTAGGTTaGACTGTCCATCGTAACCTC | + |
Preference number: 5 (lower is better) Translates to: TLQGTRVLPSESMAIAHTPLSLG*TVHRNL Trigger: GAGGTTACGATGGACAGTCAAACCTAAGCTCAGTGG...AGTGTGTGCAATTGCCATAGATTCAGAAGGAAGGACTCTTGTTCCCTGCAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS-3UTR CAA 90 bp | AGGTACAAATGGTCAATGTGCTCTGGAAGCGTTGTGATGAGGGAGAGTTATTCACCACTGAGCTTAGGTTaGACTGTCCATCGTAACCTC | + |
Preference number: 5 (lower is better) Translates to: RYKWSMCSGSVVMRESYSPLSLG*TVHRNL Trigger: GAGGTTACGATGGACAGTCAAACCTAAGCTCAGTGG...TGAATAACTCTCCCTCATCACAACGCTTCCAGAGCACATTGACCATTTGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS TCA 72 bp | GCCCAGCGATGGACGTGCAGCATCGGGGCCGAGTCCTaGAAGCTGGCAGGTGGGGCCGGCGCTCTGGCATCA | + |
Preference number: 6 (lower is better) Translates to: AQRWTCSIGAES*KLAGGAGALAS Trigger: TGATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGATGCTGCACGTCCATCGCTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CCA 72 bp | AGGCAGGCGGATATTGGACAGCAGCTCGGGCAGGCATaGTCCCCTCTGCTCCCGGTCATACCTGACCCAGGC | + |
Preference number: 6 (lower is better) Translates to: RQADIGQQLGQA*SPLLPVIPDPG Trigger: GCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CCA 72 bp | GATGGACGTGCAGCATCGGGGCCGAGTCCTGAAAGCTaGCAGGTGGGGCCGGCGCTCTGGCATCAGATGATA | + |
Preference number: 6 (lower is better) Translates to: DGRAASGPSPES*QVGPALWHQMI Trigger: TATCATCTGATGCCAGAGCGCCGGCCCCACCTGCCAGCTTTCAGGACTCGGCCCCGATGCTGCACGTCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CAA 72 bp | GATAAGAACTGGGGCCGGCAAAGAGGCAGGCGGATATaGGACAGCAGCTCGGGCAGGCATGGTCCCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: DKNWGRQRGRRI*DSSSGRHGPLC Trigger: GCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGGCCCCAGTTCTTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CAA 90 bp | ACTCGATCTGATAAGAACTGGGGCCGGCAAAGAGGCAGGCGGATATaGGACAGCAGCTCGGGCAGGCATGGTCCCCTCTGCTCCCGGTCA | + |
Preference number: 6 (lower is better) Translates to: TRSDKNWGRQRGRRI*DSSSGRHGPLCSRS Trigger: TGACCGGGAGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGGCCCCAGTTCTTATCAGATCGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS TCA 72 bp | CGGGCAGGCATGGTCCCCTCTGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTTCAAAAACCTGCTCCT | + |
Preference number: 6 (lower is better) Translates to: RAGMVPSAPGHT*PRPMQLQKPAP Trigger: AGGAGCAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CCA 72 bp | ATAAGAACTGGGGCCGGCAAAGAGGCAGGCGGATATTaGACAGCAGCTCGGGCAGGCATGGTCCCCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: IRTGAGKEAGGY*TAARAGMVPSA Trigger: AGCAGAGGGGACCATGCCTGCCCGAGCTGCTGTCCAATATCCGCCTGCCTCTTTGCCGGCCCCAGTTCTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS TCA 72 bp | CGGGCAGGCATGGTCCCCTCTGCTCCCGGTCATACCTaGCCCAGGCCAATGCAGCTTCAAAAACCTTTCTCG | + |
Preference number: 6 (lower is better) Translates to: RAGMVPSAPGHT*PRPMQLQKPFS Trigger: CGAGAAAGGTTTTTGAAGCTGCATTGGCCTGGGTCAGGTATGACCGGGAGCAGAGGGGACCATGCCTGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS CAA 90 bp | AAGCTGGCAGGTGGGGCCGGCGCTCTGGCATCAGATGATAGTCCTTaGCTTCATCGACCAGGTCCCTGCATTTGTGACAGCACCGTACCA | + |
Preference number: 6 (lower is better) Translates to: KLAGGAGALASDDSP*LHRPGPCICDSTVP Trigger: TGGTACGGTGCTGTCACAAATGCAGGGACCTGGTCGATGAAGCAAAGGACTATCATCTGATGCCAGAGCGCCGGCCCCACCTGCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS TCA 72 bp | ACGGGATGGAGGCCGCTAAGACGATCCGGTGAGCACTaGACTTGTGGTCCCCAATCTTTAGCGTCACGTCGC | + |
Preference number: 6 (lower is better) Translates to: TGWRPLRRSGEH*TCGPQSLASRR Trigger: GCGACGTGACGCTAAAGATTGGGGACCACAAGTTCAGTGCTCACCGGATCGTCTTAGCGGCCTCCATCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS GCA 72 bp | TCTCGGAGGAACGTGCAGCAAGCATCTTTGATGCTCTaGAGCTGCAGGAAGCTTGCCCCCATCAGCAGGGAC | + |
Preference number: 6 (lower is better) Translates to: SRRNVQQASLML*SCRKLAPISRD Trigger: GTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCTCCGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS CAA 72 bp | GGTGGGGCCGGCGCTCTGGCATCAGATGATAGTCCTTaGCTTCATCGACCAGGTCCCTGCATTTGTGACAGC | + |
Preference number: 6 (lower is better) Translates to: GGAGALASDDSP*LHRPGPCICDS Trigger: GCTGTCACAAATGCAGGGACCTGGTCGATGAAGCAAAGGACTATCATCTGATGCCAGAGCGCCGGCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS GCA 72 bp | AGGAACGTGCAGCAAGCATCTTTGATGCTCTGCAGCTaGAGGAAGCTTGCCCCCATCAGCAGGGACTGCACA | + |
Preference number: 6 (lower is better) Translates to: RNVQQASLMLCS*RKLAPISRDCT Trigger: TGTGCAGTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS GCA 72 bp | GTGGGGCCGGCGCTCTGGCATCAGATGATAGTCCTTTaGTTCATCGACCAGGTCCCTGCATTTGTGACAGCA | + |
Preference number: 6 (lower is better) Translates to: VGPALWHQMIVL*FIDQVPAFVTA Trigger: TGCTGTCACAAATGCAGGGACCTGGTCGATGAAGCAAAGGACTATCATCTGATGCCAGAGCGCCGGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS TCA 72 bp | TGGAAGTACGGGATGGAGGCCGCTAAGACGATCCGGTaGGCACTGAACTTGTGGTCCCCAATCTTTAGCGTC | + |
Preference number: 6 (lower is better) Translates to: WKYGMEAAKTIR*ALNLWSPIFSV Trigger: GACGCTAAAGATTGGGGACCACAAGTTCAGTGCTCACCGGATCGTCTTAGCGGCCTCCATCCCGTACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS TCA 72 bp | TCGGCAAACTGGCGCACACCCAGGCAATTTTTGGGGTaGAGCCTTTCTCGGAGGAACGTGCAGCAAGCATCT | + |
Preference number: 6 (lower is better) Translates to: SANWRTPRQFLG*SLSRRNVQQAS Trigger: AGATGCTTGCTGCACGTTCCTCCGAGAAAGGCTTCACCCCAAAAATTGCCTGGGTGTGCGCCAGTTTGCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS CCA 72 bp | ACCAGGTCATCTTGCTGCACTCGATCTGATAAGAACTaGGGCCGGCAAAGAGGCAGGCGGATATTGGACAGC | + |
Preference number: 6 (lower is better) Translates to: TRSSCCTRSDKN*GRQRGRRILDS Trigger: GCTGTCCAATATCCGCCTGCCTCTTTGCCGGCCCCAGTTCTTATCAGATCGAGTGCAGCAAGATGACCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS CAA 90 bp | TGCAGCTTCAAAAACCTTTCTCGGAGGAACGTGCAGCAAGCATCTTaGATGCTCTGCAGCTGCAGGAAGCTTGCCCCCATCAGCAGGGAC | + |
Preference number: 6 (lower is better) Translates to: CSFKNLSRRNVQQAS*MLCSCRKLAPISRD Trigger: GTCCCTGCTGATGGGGGCAAGCTTCCTGCAGCTGCAGAGCATCAAAGATGCTTGCTGCACGTTCCTCCGAGAAAGGTTTTTGAAGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197336.5 |
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CDS CCA 72 bp | TGCTTGCACTCCATCATGTCGTTCGTAAACATAGCATaGAAGTACGGGATGGAGGCCGCTAAGACGATCCGG | + |
Preference number: 6 (lower is better) Translates to: CLHSIMSFVNIA*KYGMEAAKTIR Trigger: CCGGATCGTCTTAGCGGCCTCCATCCCGTACTTCCATGCTATGTTTACGAACGACATGATGGAGTGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS CAA 90 bp | TCTTCGGACAGAGACACCTCTACAAAGTGCTGGTGGATGAAGCTGTaGGCTGCATCGTACAACACAGCACACATCATCGTCTCGGCAAAC | + |
Preference number: 6 (lower is better) Translates to: SSDRDTSTKCWWMKL*AASYNTAHIIVSAN Trigger: GTTTGCCGAGACGATGATGTGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTCTCTGTCCGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS TCA 72 bp | CTTCGGACAGAGACACCTCTACAAAGTGCTGGTGGATaGAGCTGTTGGCTGCATCGTACAACACAGCACACA | + |
Preference number: 6 (lower is better) Translates to: LRTETPLQSAGG*SCWLHRTTQHT Trigger: TGTGTGCTGTGTTGTACGATGCAGCCAACAGCTTCATCCACCAGCACTTTGTAGAGGTGTCTCTGTCCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000198164.5 ENSMUST00000198400.5 ENSMUST00000200256.2 |
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CDS GCA 72 bp | TTGATGAGAGCCTCCAGGGCACTTGGGTCCATTCCCTaGATTACAATCTCATCCTGCTTGCACTCCATCATG | + |
Preference number: 6 (lower is better) Translates to: LMRASRALGSIP*ITISSCLHSIM Trigger: CATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAGGGAATGGACCCAAGTGCCCTGGAGGCTCTCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 ENSMUST00000198400.5 |
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CDS CAA 90 bp | TCCAGGGCACTTGGGTCCATTCCCTGCATTACAATCTCATCCTGCTaGCACTCCATCATGTCGTTCGTAAACATAGCATGGAAGTACGGG | + |
Preference number: 6 (lower is better) Translates to: SRALGSIPCITISSC*HSIMSFVNIAWKYG Trigger: CCCGTACTTCCATGCTATGTTTACGAACGACATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAGGGAATGGACCCAAGTGCCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS GCA 72 bp | GCACTTGGGTCCATTCCCTGCATTACAATCTCATCCTaGTTGCACTCCATCATGTCGTTCGTAAACATAGCA | + |
Preference number: 6 (lower is better) Translates to: ALGSIPCITISS*LHSIMSFVNIA Trigger: TGCTATGTTTACGAACGACATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAGGGAATGGACCCAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |
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CDS CAA 72 bp | CTTGGGTCCATTCCCTGCATTACAATCTCATCCTGCTaGCACTCCATCATGTCGTTCGTAAACATAGCATGG | + |
Preference number: 6 (lower is better) Translates to: LGSIPCITISSC*HSIMSFVNIAW Trigger: CCATGCTATGTTTACGAACGACATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAGGGAATGGACCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068025.13 ENSMUST00000197336.5 ENSMUST00000198164.5 |