Pregenerated sensors for KLHL17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00002076083Ensembl transcript IDs: ENSMUST00000105569.5, ENSMUST00020183129.1, ENSMUST00020183325.1
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTGGCGCGTGTCAGAGGCTGGTAGAGGACACAGACAGCGTGGGTaGGGAAGGTGGTGGGAAGTTGAGCAGCTCCAGCACCGCCACGCC | + |
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Preference number: 1 (lower is better) Translates to: VWRVSEAGRGHRQRG*GRWWEVEQLQHRHA Trigger: GGCGTGGCGGTGCTGGAGCTGCTCAACTTCCCACCACCTTCCTCACCCACGCTGTCTGTGTCCTCTACCAGCCTCTGACACGCGCCAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | CAGCAAAGAGCACAGGGCCAGCGCCCTCACATCGACGGGGTCTCGTaGGGCTGGTTCCCAGAACACCTCTCTGCTCAGGCAGCAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: QQRAQGQRPHIDGVS*GWFPEHLSAQAAGG Trigger: TCCACCTGCTGCCTGAGCAGAGAGGTGTTCTGGGAACCAGCCGCACGAGACCCCGTCGATGTGAGGGCGCTGGCCCTGTGCTCTTTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | AGCCAGCCGTCCATGGCCACCAGGTCATGTGTGCTCCTGGGGAGTTaGATAGGCAAGAGTAAGCCCAAGGGGCAAGCCAAGAGACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SQPSMATRSCVLLGS*IGKSKPKGQAKRQA Trigger: GGCCTGTCTCTTGGCTTGCCCCTTGGGCTTACTCTTGCCTATCCAACTCCCCAGGAGCACACATGACCTGGTGGCCATGGACGGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | TCACATCGACGGGGTCTCGTGCGGCTGGTTCCCAGAACACCTCTCTaGTCAGGCAGCAGGTGGAACTTAAGGGCCTCGATGAGCAGATCC | + |
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Preference number: 1 (lower is better) Translates to: SHRRGLVRLVPRTPL*SGSRWNLRASMSRS Trigger: GGATCTGCTCATCGAGGCCCTTAAGTTCCACCTGCTGCCTGAGCAGAGAGGTGTTCTGGGAACCAGCCGCACGAGACCCCGTCGATGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | GCAACTCCTACACGAGCCCGACGTGTAGACATGGAGGCCACCACATaGCAACGGTCAGTCCGCGTGTCATACGCTTCACAGTCTCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: ATPTRARRVDMEATT*QRSVRVSYASQSPW Trigger: CCACGGAGACTGTGAAGCGTATGACACGCGGACTGACCGTTGGCATGTGGTGGCCTCCATGTCTACACGTCGGGCTCGTGTAGGAGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | ACAGGAGCCCATGCAGAGCAGCTACACCTAGGCAGCTCCGCCTTGTaGCCATGGAGACCTCGGGCTGCCATGTGTTTGTCACAGGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: TGAHAEQLHLGSSAL*PWRPRAAMCLSQGH Trigger: ATGACCCTGTGACAAACACATGGCAGCCCGAGGTCTCCATGGGCACAAGGCGGAGCTGCCTAGGTGTAGCTGCTCTGCATGGGCTCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | TGTAGTGGCAGAACCACTCACCACCCGCCCCTGGCCTTATACACCTaGGGATATTCATGGGTGCCACACTCTCCCAGGCACCAGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: CSGRTTHHPPLALYT*GYSWVPHSPRHQPW Trigger: CCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTGGTGAGTGGTTCTGCCACTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | ACATGCCAACGGTCAGTCCGCGTGTCATACGCTTCACAGTCTCCGTaGATCGCGAACAGGCTCCCACCACCGACAGCAAAGAGCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: TCQRSVRVSYASQSP*IANRLPPPTAKSTG Trigger: CCCTGTGCTCTTTGCTGTCGGTGGTGGGAGCCTGTTCGCGATCCACGGAGACTGTGAAGCGTATGACACGCGGACTGACCGTTGGCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | CGCTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTaGTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RWLGVCIIFLESPCR*SCCHSCSAPSCLQG Trigger: GCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | CAGCACCGCCACGCCCACACTGCTGCGTCTTGTGAACATGCAGGATaGCGCCACCCACTTGTTGGTCCTCGGGTTGTACTTCTCTATGGA | + |
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Preference number: 1 (lower is better) Translates to: QHRHAHTAASCEHAG*RHPLVGPRVVLLYG Trigger: TCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGGCGTGGCGGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | CTCACCACCCGCCCCTGGCCTTATACACCTGCGGATATTCATGGGTaGCACACTCTCCCAGGCACCAGCCTTGGTGCTATATCTCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LTTRPWPYTPADIHG*HTLPGTSLGAISLH Trigger: GTGGAGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR TCA 90 bp | AGGTGGAACTTAAGGGCCTCGATGAGCAGATCCTTGCAGTCAGGGTaGTGCCTCACAAGGCTTTCGGCATCCACGTGGCCCAGGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RWNLRASMSRSLQSG*CLTRLSASTWPRRK Trigger: CTTCCTCCTGGGCCACGTGGATGCCGAAAGCCTTGTGAGGCATCACCCTGACTGCAAGGATCTGCTCATCGAGGCCCTTAAGTTCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR TCA 90 bp | CACTCTCCCAGGCACCAGCCTTGGTGCTATATCTCTCCACTGAGTTaGGGCAGCTTGTGCCATCATTGCCCCCTGCGACATACAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: HSPRHQPWCYISPLS*GSLCHHCPLRHTGH Trigger: GTGCCCTGTATGTCGCAGGGGGCAATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | CTTGCCGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTaGAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: LAAAPVATVALPLPA*KAQLCCSSSFSECL Trigger: TAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | CACCCTCCAGCACTGCTACTCCTGCTGAGCTGCGCCGGCTCAGCATaGAAGCTACAGGTGTCCATGAATTCACCTGGGGCTCATACTTCT | + |
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Preference number: 1 (lower is better) Translates to: HPPALLLLLSCAGSA*KLQVSMNSPGAHTS Trigger: AGAAGTATGAGCCCCAGGTGAATTCATGGACACCTGTAGCTTCCATGCTGAGCCGGCGCAGCTCAGCAGGAGTAGCAGTGCTGGAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | ACCACTCACCACCCGCCCCTGGCCTTATACACCTGCGGATATTCATaGGTGCCACACTCTCCCAGGCACCAGCCTTGGTGCTATATCTCT | + |
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Preference number: 1 (lower is better) Translates to: TTHHPPLALYTCGYS*VPHSPRHQPWCYIS Trigger: AGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTGGTGAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR TCA 90 bp | TGCCACACTCTCCCAGGCACCAGCCTTGGTGCTATATCTCTCCACTaGGTTGAGGCAGCTTGTGCCATCATTGCCCCCTGCGACATACAG | + |
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Preference number: 1 (lower is better) Translates to: CHTLPGTSLGAISLH*VEAACAIIAPCDIQ Trigger: CTGTATGTCGCAGGGGGCAATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTGTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | CCTCCGGGTGCTCATGGCAGCAATGGATGTCCATGTTCCCGTCAGTaGGTCATATCGTTCAGCACTGTTGAGGCAGGAAGCCCCATCGTA | + |
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Preference number: 1 (lower is better) Translates to: PPGAHGSNGCPCSRQ*VISFSTVEAGSPIV Trigger: TACGATGGGGCTTCCTGCCTCAACAGTGCTGAACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | GTGACGAGCTGTCATAACCACCCACGGCGTACAGGTTCCCATCTGTaGGAAGGCAATATACCCACGAAGCTCATATCGCCTCCGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: VTSCHNHPRRTGSHL*EGNIPTKLISPPGA Trigger: AGCACCCGGAGGCGATATGAGCTTCGTGGGTATATTGCCTTCCCACAGATGGGAACCTGTACGCCGTGGGTGGTTATGACAGCTCGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | CTACAGGTGTCCATGAATTCACCTGGGGCTCATACTTCTCCACGGTaGCCAGGTGTGACGAGCTGTCATAACCACCCACGGCGTACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LQVSMNSPGAHTSPR*PGVTSCHNHPRRTG Trigger: ACCTGTACGCCGTGGGTGGTTATGACAGCTCGTCACACCTGGCCACCGTGGAGAAGTATGAGCCCCAGGTGAATTCATGGACACCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | GCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGTGTTaGTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGT | + |
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Preference number: 1 (lower is better) Translates to: ATVALPLPACKAQLC*SSSFSECLPSILYC Trigger: ACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | TCTGTGGGAAGGCAATATACCCACGAAGCTCATATCGCCTCCGGGTaGTCATGGCAGCAATGGATGTCCATGTTCCCGTCAGTGGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: SVGRQYTHEAHIASG*SWQQWMSMFPSVGH Trigger: ATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTCGTGGGTATATTGCCTTCCCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | TGGAATAAACCAGATGTAGTGGCAGAACCACTCACCACCCGCCCCTaGCCTTATACACCTGCGGATATTCATGGGTGCCACACTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: WNKPDVVAEPLTTRP*PYTPADIHGCHTLP Trigger: TGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTGGTGAGTGGTTCTGCCACTACATCTGGTTTATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR TCA 90 bp | TCATCAACCTTGGTACATGCTGCCTCCGAGTGTCTACGTCATGTTTaGCCCAGCTCAGGACTGCACGGTACACATCTTCCTCTGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SSTLVHAASECLRHV*PSSGLHGTHLPLRA Trigger: TGCCCTCAGAGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTCAAACATGACGTAGACACTCGGAGGCAGCATGTACCAAGGTTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | TATACCCACGAAGCTCATATCGCCTCCGGGTGCTCATGGCAGCAATaGATGTCCATGTTCCCGTCAGTGGGTCATATCGTTCAGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: YTHEAHIASGCSWQQ*MSMFPSVGHIVQHC Trigger: ACAGTGCTGAACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTCGTGGGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CCA 90 bp | GGAAGGCAATATACCCACGAAGCTCATATCGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATGTTCCCGTCAGTGGGTCATATCGTT | + |
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Preference number: 1 (lower is better) Translates to: GRQYTHEAHIASGCS*QQWMSMFPSVGHIV Trigger: AACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTCGTGGGTATATTGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR GCA 90 bp | ATGTTTATTGTTCAAGTTGGCTCATATTGCTGTGTAGGATCTAAGTaGATGTTGTGTGCCCAGCTCCATAGAAGACCCAGAAAAGACATC | + |
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Preference number: 1 (lower is better) Translates to: MFIVQVGSYCCVGSK*MLCAQLHRRPRKDI Trigger: GATGTCTTTTCTGGGTCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGAGCCAACTTGAACAATAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR GCA 90 bp | CATACAGGGCACCCTCCAGCACTGCTACTCCTGCTGAGCTGCGCCGGCTCAGCAGACCCAGCTCAGGACTaGACGGTACACATCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HTGHPPALLLLLSCAGSADPAQD*TVHIFL Trigger: GAGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTC...TGCTGAGCCGGCGCAGCTCAGCAGGAGTAGCAGTGCTGGAGGGTGCCCTGTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | CCGCCCACAGCATACAGTCGGTTCCCGACGGCAGCAACTCCTACACGAGCCCGACCGCCACCCACTTGTTaGTCCTCGGGTTGTACTTCT | + |
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Preference number: 2 (lower is better) Translates to: PPTAYSRFPTAATPTRARPPPTC*SSGCTS Trigger: AGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGG...TCGGGCTCGTGTAGGAGTTGCTGCCGTCGGGAACCGACTGTATGCTGTGGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCAGCACTGCTACTCCTGCTGAGCTGCGCCGGCTCAGCATGGAAGCTACAGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: PSSTATPAELRRLSMEATASGCS*QQWMSM Trigger: CATGGACATCCATTGCTGCCATGAGCACCCGGAGGC...TGTAGCTTCCATGCTGAGCCGGCGCAGCTCAGCAGGAGTAGCAGTGCTGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | CGTGTAGACATGGAGGCCACCACATGCCAACGGTCAGTCCGCGTGTCATACGCTCTTTCGGCATCCACGTaGCCCAGGAGGAAGTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: RVDMEATTCQRSVRVSYALSAST*PRRKSR Trigger: CCGAGACTTCCTCCTGGGCCACGTGGATGCCGAAAG...AGCGTATGACACGCGGACTGACCGTTGGCATGTGGTGGCCTCCATGTCTACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCGGCCTCTGTGCAGTCTaGCGCGTGTCAGAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TPRPRPKDRKSLVGYVICGLCAV*RVSEAG Trigger: ACCAGCCTCTGACACGCGCCAGACTGCACAGAGGCC...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR TCA 90 bp | CGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTCTCATCCTCCTTCAGTaGGTGTCTACCCAGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: RCSCCHSCSAPSCLQGPALILLQ*VSTQHS Trigger: AGAATGCTGGGTAGACACTCACTGAAGGAGGATGAG...AGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGGCAAGCCAAGAGACAGGCCAAATGAGTGGGGCACAGAGGGAGTAACCTCCTTGCAGTCAGGGTaGTGCCTCACAAGGCTTTCG | + |
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Preference number: 2 (lower is better) Translates to: PRGKPRDRPNEWGTEGVTSLQSG*CLTRLS Trigger: CGAAAGCCTTGTGAGGCATCACCCTGACTGCAAGGA...GGTTACTCCCTCTGTGCCCCACTCATTTGGCCTGTCTCTTGGCTTGCCCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR GCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATGCTCTGCCCCTTCCTaGTTGCAAGGCCCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LARPSCVAHPPSVSVYPACSAPS*LQGPAV Trigger: CACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCA...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR GCA 90 bp | CTACTCCTGCTGAGCTGCGCCGGCTCAGCATGGAAGCTACAGGTGTCCATGAATGAAAGCCCTTGCCGCTaGTCCTGTTGCCACAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLLLSCAGSAWKLQVSMNESPCR*SCCHSC Trigger: GCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTC...ATTCATGGACACCTGTAGCTTCCATGCTGAGCCGGCGCAGCTCAGCAGGAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTAGGACACAGACAGCGTaGGTGAGGAAGGTGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RWLGVCIIFLESPCRCSCRTQTA*VRKVVG Trigger: TCCCACCACCTTCCTCACCCACGCTGTCTGTGTCCT...ACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCGCCGGCTCAGCATGGAAGCTACAGGTGTCCATGAATTCACCTGGGGCTTGCTCAGGCAGCAGGTaGAACTTAAGGGCCTCGATG | + |
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Preference number: 2 (lower is better) Translates to: SCAGSAWKLQVSMNSPGACSGSR*NLRASM Trigger: CATCGAGGCCCTTAAGTTCCACCTGCTGCCTGAGCA...AGCCCCAGGTGAATTCATGGACACCTGTAGCTTCCATGCTGAGCCGGCGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR CAA 90 bp | CTTGTGAACATGCAGGATGCCGCCACCCACTTGTTGGTCCTCGGGTaGTACTTCTCTATGGAGTTGAGGCTGGAGCTGCCGTCATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LVNMQDAATHLLVLG*YFSMELRLELPSLP Trigger: GGGCAATGACGGCAGCTCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CAA 90 bp | CCCACACTGCTGCGTCTTGTGAACATGCAGGATGCCGCCACCCACTaGTTGGTCCTCGGGTTGTACTTCTCTATGGAGTTGAGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PTLLRLVNMQDAATH*LVLGLYFSMELRLE Trigger: CTCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CAA 90 bp | ACACTCTCCCAGGCACCAGCCTTGGTGCTATATCTCTCCACTGAGTaGAGGCAGCTTGTGCCATCATTGCCCCCTGCGACATACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLSQAPALVLYLSTE*RQLVPSLPPATYRA Trigger: TGCCCTGTATGTCGCAGGGGGCAATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR TCA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCCACTGCTGCGTCTTGTaGACATGCAGGATGCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: TPRPRPKDRKSLVGYVICHCCVL*TCRMPP Trigger: TGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTG...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTGCCCCTTCCTGCTTaGAAGGCCCAGCTGTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: CKAQLCCSSSFSECLPSILPLPA*KAQLCC Trigger: GCAACACAGCTGGGCCTTGCAAGCAGGAAGGGGCAG...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGCTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTATGCCGCTGCTCCTGTTaGCACAGTTGCTCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LPACKAQLCCSSSFSECLCRCSC*HSCSAP Trigger: AGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCA...TAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTAGGGGTCTGCCGCCACCCACTTGTTaGTCCTCGGGTTGTACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SAWQRQISAVCKALARGLPPPTC*SSGCTS Trigger: AGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGG...CAGACCCCTAGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CAA 90 bp | CATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCCACAGTaGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGTGTTGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HHLLRKPLPLLLLPQ*LCPFLLARPSCVAH Trigger: ATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CAA 90 bp | ACACTGCTGCGTCTTGTGAACATGCAGGATGCCGCCACCCACTTGTaGGTCCTCGGGTTGTACTTCTCTATGGAGTTGAGGCTGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TLLRLVNMQDAATHL*VLGLYFSMELRLEL Trigger: CAGCTCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CAA 90 bp | TTGGTGCTATATCTCTCCACTGAGTTGAGGCAGCTTGTGCCATCATaGCCCCCTGCGACATACAGGGCACCCTCCAGCACTGCTACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LVLYLSTELRQLVPS*PPATYRAPSSTATP Trigger: AGGAGTAGCAGTGCTGGAGGGTGCCCTGTATGTCGCAGGGGGCAATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CAA 90 bp | CACCTGCGGATATTCATGGGTGCCACACTCTCCCAGGCACCAGCCTaGGTGCTATATCTCTCCACTGAGTTGAGGCAGCTTGTGCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: HLRIFMGATLSQAPA*VLYLSTELRQLVPS Trigger: TGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAAAGGTGGTGGGAAGTTaGGCAGCTCCAGCACCGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VSVYPAFSIVPQRETGKRKVVGS*AAPAPP Trigger: TGGCGGTGCTGGAGCTGCTCAACTTCCCACCACCTT...TCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | ATATACCCACGAAGCTCATATCGCCTCCGGGTGCTCATGGCAGCAATGGATGTCCACAGACAGCGTGGGTaGGGAAGGTGGTGGGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: IYPRSSYRLRVLMAAMDVHRQRG*GRWWEV Trigger: AACTTCCCACCACCTTCCTCACCCACGCTGTCTGTG...GACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTCGTGGGTATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR GCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCCCAGAACACCTCTCTaGTCAGGCAGCAGGTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CKAQLCCSSSFSECLPSIPRTPL*SGSRWN Trigger: GTTCCACCTGCTGCCTGAGCAGAGAGGTGTTCTGGG...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR GCA 90 bp | GATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTAGGGGTATGGAGACCTCGGGCTaGCATGTGTTTGTCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DSAWQRQISAVCKALARGMETSG*HVFVTG Trigger: CCCTGTGACAAACACATGGCAGCCCGAGGTCTCCAT...ACCCCTAGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACACTGGCCTCTGTGCAGTCTaGCGCGTGTCAGAGGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CLPSILYCPTEGDRQENTGLCAV*RVSEAG Trigger: ACCAGCCTCTGACACGCGCCAGACTGCACAGAGGCC...AGTGTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGAGTCAATAAATACGTaGGTAGACAAACAGCGCACA | + |
|
Preference number: 2 (lower is better) Translates to: RCSCCHSCSAPSCLQGPAESINT*VDKQRT Trigger: TGTGCGCTGTTTGTCTACTCACGTATTTATTGACTC...AGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTGGAACTTAAGGGCCTCGATGAGCAGATCCTTGCAGTCAGGGTGATGCCTTGTCTACGTCATGTTTaGCCCAGCTCAGGACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QVELKGLDEQILAVRVMPCLRHV*PSSGLH Trigger: GTGCAGTCCTGAGCTGGGTCAAACATGACGTAGACA...AGGCATCACCCTGACTGCAAGGATCTGCTCATCGAGGCCCTTAAGTTCCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR GCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCAGCAGAGACAGATAAGTaGTGTGTGCAAAGCGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LARPSCVAHPPSVSVYPAAETDK*CVQSAG Trigger: GCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGC...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCCACTGTGAACATGCAGGATaGCGCCACCCACTTGTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGVCIIFLESPCRCSCCHCEHAG*RHPLVG Trigger: ACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACA...GTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CAA 90 bp | TTCATCAACCTTGGTACATGCTGCCTCCGAGTGTCTACGTCATGTTaGACCCAGCTCAGGACTGCACGGTACACATCTTCCTCTGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FINLGTCCLRVSTSC*TQLRTARYTSSSEG Trigger: GCCCTCAGAGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTCAAACATGACGTAGACACTCGGAGGCAGCATGTACCAAGGTTGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | CGCCACCCACTTGTTGGTCCTCGGGTTGTACTTCTCTATGGAGTTGAGGCTGGAAGCTACAGGTGTCCATaGATTCACCTGGGGCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: RHPLVGPRVVLLYGVEAGSYRCP*IHLGLI Trigger: TATGAGCCCCAGGTGAATTCATGGACACCTGTAGCT...TCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR GCA 90 bp | TTTGTGTCCTTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAATGCTCTGCCCCTTCCTaGTTGCAAGGCCCAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FVSFRDSAWQRQISAVCKCSAPS*LQGPAV Trigger: CACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCA...TTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAAGGACACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR CCA 90 bp | GTTCAAGTTGGCTCATATTGCTGTGTAGGATCTAAGTGCATGTTGTGTGCCCAGTCCGCCTTGTGCCCATaGAGACCTCGGGCTGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: VQVGSYCCVGSKCMLCAQSALCP*RPRAAM Trigger: CATGGCAGCCCGAGGTCTCCATGGGCACAAGGCGGA...CTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGAGCCAACTTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTCCACAGACAGCGTGGGTaGGGAAGGTGGTGGGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SCVAHPPSVSVYPAFSIVHRQRG*GRWWEV Trigger: AACTTCCCACCACCTTCCTCACCCACGCTGTCTGTG...GACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR TCA 90 bp | GCCGTACTGTTGAGGTGCTGTGTGCACAACCCCTGGGGCTACACTCCTGGAATAGAGTCAATAAATACGTaGGTAGACAAACAGCGCACA | + |
|
Preference number: 2 (lower is better) Translates to: AVLLRCCVHNPWGYTPGIESINT*VDKQRT Trigger: TGTGCGCTGTTTGTCTACTCACGTATTTATTGACTC...TATTCCAGGAGTGTAGCCCCAGGGGTTGTGCACACAGCACCTCAACAGTACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATCAATGCAGGAGAGCTaGCAATCGAGAGTAAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LARPSCVAHPPSVSVYPASMQES*QSRVNV Trigger: CACATTTACTCTCGATTGTCAGCTCTCCTGCATTGA...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACTCAGCCTCAGGCCCATaGAGCCCAAGAAACATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ECLPSILYCPTEGDRQENSASGP*SPRNMF Trigger: AAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCAAAGGCCCAGCTGTGTTaGTCATCCTCCTTCAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SASGPWSPRNMFIVQVGSKAQLC*SSSFSE Trigger: CTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTT...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| 3UTR-3UTR TCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACGAGTCAATAAATACGTaGGTAGACAAACAGCGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ECLPSILYCPTEGDRQENESINT*VDKQRT Trigger: TGTGCGCTGTTTGTCTACTCACGTATTTATTGACTC...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCATTCAGGGATAGTGCCTaGCAGAGACAGATAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SASGPWSPRNMFIVQVGSFRDSA*QRQISA Trigger: AGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAA...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGTCCTTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAATCAATGCAGGAGAGCTaGCAATCGAGAGTAAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: FVSFRDSAWQRQISAVCKSMQES*QSRVNV Trigger: CACATTTACTCTCGATTGTCAGCTCTCCTGCATTGA...TTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAAGGACACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR GCA 90 bp | TCATATTGCTGTGTAGGATCTAAGTGCATGTTGTGTGCCCAGCTCCATAGAAGATGTGTAGGATCTAAGTaGATGTTGTGTGCCCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SYCCVGSKCMLCAQLHRRCVGSK*MLCAQL Trigger: GAGCTGGGCACACAACATGCACTTAGATCCTACACA...TCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CAA 90 bp | ATTGTTCAAGTTGGCTCATATTGCTGTGTAGGATCTAAGTGCATGTaGTGTGCCCAGCTCCATAGAAGACCCAGAAAAGACATCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: IVQVGSYCCVGSKCM*CAQLHRRPRKDITL Trigger: CAGTGTGATGTCTTTTCTGGGTCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGAGCCAACTTGAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR CCA 72 bp | GGCCAGCGCCCTCACATCGACGGGGTCTCGTGCGGCTaGTTCCCAGAACACCTCTCTGCTCAGGCAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GQRPHIDGVSCG*FPEHLSAQAAG Trigger: ACCTGCTGCCTGAGCAGAGAGGTGTTCTGGGAACCAGCCGCACGAGACCCCGTCGATGTGAGGGCGCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR-3UTR CAA 90 bp | GCCGCCCACAGCATACAGTCGGTTCCCGACGGCAGCAACTCCTACACGAGCCCGGCCGCCACCCACTTGTaGGTCCTCGGGTTGTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: AAHSIQSVPDGSNSYTSPAATHL*VLGLYF Trigger: GAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGC...CGGGCTCGTGTAGGAGTTGCTGCCGTCGGGAACCGACTGTATGCTGTGGGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
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| 3UTR TCA 72 bp | GCTCCAGCACCGCCACGCCCACACTGCTGCGTCTTGTaGACATGCAGGATGCCGCCACCCACTTGTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: APAPPRPHCCVL*TCRMPPPTCWS Trigger: GGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGGCGTGGCGGTGCTGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
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| 3UTR-3UTR CAA 90 bp | CGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGATGCCGCCACCCACTaGTTGGTCCTCGGGTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RCSCCHSCSAPSCLQGPADAATH*LVLGLY Trigger: GTACAACCCGAGGACCAACAAGTGGGTGGCGGCATC...AGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | CACCCGCCCCTGGCCTTATACACCTGCGGATATTCATaGGTGCCACACTCTCCCAGGCACCAGCCTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HPPLALYTCGYS*VPHSPRHQPWC Trigger: GCACCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | GAGCAGCTACACCTAGGCAGCTCCGCCTTGTGCCCATaGAGACCTCGGGCTGCCATGTGTTTGTCACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EQLHLGSSALCP*RPRAAMCLSQG Trigger: ACCCTGTGACAAACACATGGCAGCCCGAGGTCTCCATGGGCACAAGGCGGAGCTGCCTAGGTGTAGCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR CAA 90 bp | AGCACCGCCACGCCCACACTGCTGCGTCTTGTGAACATGCAGGATGCCGCCACCTACTTCTCTATGGAGTaGAGGCTGGAGCTGCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: STATPTLLRLVNMQDAATYFSME*RLELPS Trigger: TGACGGCAGCTCCAGCCTCAACTCCATAGAGAAGTA...GGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGGCGTGGCGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | GTGTCAGAGGCTGGTAGAGGACACAGACAGCGTGGGTaGGGAAGGTGGTGGGAAGTTGAGCAGCTCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VSEAGRGHRQRG*GRWWEVEQLQH Trigger: GTGCTGGAGCTGCTCAACTTCCCACCACCTTCCTCACCCACGCTGTCTGTGTCCTCTACCAGCCTCTGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | CACCTGGGGCTCATACTTCTCCACGGTGGCCAGGTGTaGCGAGCTGTCATAACCACCCACGGCGTACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLGLILLHGGQV*RAVITTHGVQV Trigger: AACCTGTACGCCGTGGGTGGTTATGACAGCTCGTCACACCTGGCCACCGTGGAGAAGTATGAGCCCCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | CGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTaGTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RCSCCHSCSAPS*LQGPAVLLILL Trigger: AAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | ACACGAGCCCGACGTGTAGACATGGAGGCCACCACATaGCAACGGTCAGTCCGCGTGTCATACGCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TRARRVDMEATT*QRSVRVSYASQ Trigger: CTGTGAAGCGTATGACACGCGGACTGACCGTTGGCATGTGGTGGCCTCCATGTCTACACGTCGGGCTCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | AGAACCACTCACCACCCGCCCCTGGCCTTATACACCTaGGGATATTCATGGGTGCCACACTCTCCCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RTTHHPPLALYT*GYSWVPHSPRH Trigger: GTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTGGTGAGTGGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | GCACTGCTACTCCTGCTGAGCTGCGCCGGCTCAGCATaGAAGCTACAGGTGTCCATGAATTCACCTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALLLLLSCAGSA*KLQVSMNSPGA Trigger: AGCCCCAGGTGAATTCATGGACACCTGTAGCTTCCATGCTGAGCCGGCGCAGCTCAGCAGGAGTAGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCAGCCGCCACCCACTTGTaGGTCCTCGGGTTGTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LARPSCVAHPPSVSVYPAAATHL*VLGLYF Trigger: GAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGC...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | TTAAGGGCCTCGATGAGCAGATCCTTGCAGTCAGGGTaGTGCCTCACAAGGCTTTCGGCATCCACGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRASMSRSLQSG*CLTRLSASTWP Trigger: GGGCCACGTGGATGCCGAAAGCCTTGTGAGGCATCACCCTGACTGCAAGGATCTGCTCATCGAGGCCCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | GGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTaGTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GVCIIFLESPCR*SCCHSCSAPSC Trigger: GCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | CACGCCCACACTGCTGCGTCTTGTGAACATGCAGGATaGCGCCACCCACTTGTTGGTCCTCGGGTTGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: HAHTAASCEHAG*RHPLVGPRVVL Trigger: AAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | CGCCCCTGGCCTTATACACCTGCGGATATTCATGGGTaGCACACTCTCCCAGGCACCAGCCTTGGTGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: RPWPYTPADIHG*HTLPGTSLGAI Trigger: TATAGCACCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | CCAGATGTAGTGGCAGAACCACTCACCACCCGCCCCTaGCCTTATACACCTGCGGATATTCATGGGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PDVVAEPLTTRP*PYTPADIHGCH Trigger: GTGGCACCCATGAATATCCGCAGGTGTATAAGGCCAGGGGCGGGTGGTGAGTGGTTCTGCCACTACATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | AGCCCAAGGGGCAAGCCAAGAGACAGGCCAAATGAGTaGGGCACAGAGGGAGTAACCATAGGGACAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPRGKPRDRPNE*GTEGVTIGTGQ Trigger: TTGCCCTGTCCCTATGGTTACTCCCTCTGTGCCCCACTCATTTGGCCTGTCTCTTGGCTTGCCCCTTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | TCCATGGCCACCAGGTCATGTGTGCTCCTGGGGAGTTaGATAGGCAAGAGTAAGCCCAAGGGGCAAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SMATRSCVLLGS*IGKSKPKGQAK Trigger: CTTGGCTTGCCCCTTGGGCTTACTCTTGCCTATCCAACTCCCCAGGAGCACACATGACCTGGTGGCCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | AGGGAGACAGGCAAGAGAACACTCCGAAGGGGTCCTTaGTCCCCTCAATGCAGGAGAGCTGACAATCGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RETGKRTLRRGP*SPQCRRADNRE Trigger: CTCTCGATTGTCAGCTCTCCTGCATTGAGGGGACCAAGGACCCCTTCGGAGTGTTCTCTTGCCTGTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | CTGGTTCCCAGAACACCTCTCTGCTCAGGCAGCAGGTaGAACTTAAGGGCCTCGATGAGCAGATCCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVPRTPLCSGSR*NLRASMSRSLQ Trigger: CTGCAAGGATCTGCTCATCGAGGCCCTTAAGTTCCACCTGCTGCCTGAGCAGAGAGGTGTTCTGGGAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | TCCATGAATTCACCTGGGGCTCATACTTCTCCACGGTaGCCAGGTGTGACGAGCTGTCATAACCACCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SMNSPGAHTSPR*PGVTSCHNHPR Trigger: CCGTGGGTGGTTATGACAGCTCGTCACACCTGGCCACCGTGGAGAAGTATGAGCCCCAGGTGAATTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | AGGCACCAGCCTTGGTGCTATATCTCTCCACTGAGTTaGGGCAGCTTGTGCCATCATTGCCCCCTGCGACAT | + |
|
Preference number: 3 (lower is better) Translates to: RHQPWCYISPLS*GSLCHHCPLRH Trigger: ATGTCGCAGGGGGCAATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | ATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTaGCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IIFLESPCRCSC*HSCSAPSCLQG Trigger: GCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | TATACCCACGAAGCTCATATCGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATGTTCCCGTCAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YTHEAHIASGCS*QQWMSMFPSVG Trigger: ACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTCGTGGGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | CTCAGCATGGAAGCTACAGGTGTCCATGAATTCACCTaGGGCTCATACTTCTCCACGGTGGCCAGGTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSMEATGVHEFT*GSYFSTVARCD Trigger: GTCACACCTGGCCACCGTGGAGAAGTATGAGCCCCAGGTGAATTCATGGACACCTGTAGCTTCCATGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTGGATCTAAGTGCATGTaGTGTGCCCAGCTCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: RWLGVCIIFLESPCRCSCGSKCM*CAQLHR Trigger: TCTATGGAGCTGGGCACACAACATGCACTTAGATCC...ACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGTACTTCTCTATGGAGTaGAGGCTGGAGCTGCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LARGLHHLLRKPLPLLLLYFSME*RLELPS Trigger: TGACGGCAGCTCCAGCCTCAACTCCATAGAGAAGTA...CAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | AGGCAATATACCCACGAAGCTCATATCGCCTCCGGGTaGTCATGGCAGCAATGGATGTCCATGTTCCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RQYTHEAHIASG*SWQQWMSMFPS Trigger: TGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTCGTGGGTATATTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | GCTCATGGCAGCAATGGATGTCCATGTTCCCGTCAGTaGGTCATATCGTTCAGCACTGTTGAGGCAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AHGSNGCPCSRQ*VISFSTVEAGS Trigger: GCTTCCTGCCTCAACAGTGCTGAACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | GAAGCTCATATCGCCTCCGGGTGCTCATGGCAGCAATaGATGTCCATGTTCCCGTCAGTGGGTCATATCGTT | + |
|
Preference number: 3 (lower is better) Translates to: EAHIASGCSWQQ*MSMFPSVGHIV Trigger: AACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | TTGGTACATGCTGCCTCCGAGTGTCTACGTCATGTTTaGCCCAGCTCAGGACTGCACGGTACACATCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVHAASECLRHV*PSSGLHGTHLP Trigger: AGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTCAAACATGACGTAGACACTCGGAGGCAGCATGTACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CCA 72 bp | TGTCATAACCACCCACGGCGTACAGGTTCCCATCTGTaGGAAGGCAATATACCCACGAAGCTCATATCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CHNHPRRTGSHL*EGNIPTKLISP Trigger: AGGCGATATGAGCTTCGTGGGTATATTGCCTTCCCACAGATGGGAACCTGTACGCCGTGGGTGGTTATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTCTCCTGTTGCCACAGTaGCTCTGCCCCTTCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QLCCSSSFSECLPSILYCLLLPQ*LCPFLL Trigger: AAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAG...ACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR-3UTR CAA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCTTGTTGGTCCTCGGGTaGTACTTCTCTATGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPRPRPKDRKSLVGYVICLLVLG*YFSMEL Trigger: CAACTCCATAGAGAAGTACAACCCGAGGACCAACAA...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | CAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTaGTCTGCCCTAACACTTGGTAGAGAAGACAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QDRRTGNLWWAT*SALTLGREDRV Trigger: GACTCTGTCTTCTCTACCAAGTGTTAGGGCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR TCA 72 bp | TTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTaGGTGTCTACCCAGCATTCTCTATTGTCCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LQGPAVLLILLQ*VSTQHSLLSHR Trigger: TCTGTGGGACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR GCA 72 bp | GTTCAAGTTGGCTCATATTGCTGTGTAGGATCTAAGTaGATGTTGTGTGCCCAGCTCCATAGAAGACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VQVGSYCCVGSK*MLCAQLHRRPR Trigger: TCTGGGTCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGAGCCAACTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGACCTTCCATCGGGGCTaGAGGCCGGGCCTGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAPVATVALPLPACKAQTFHRG*RPGLPG Trigger: CCCCGGCAGGCCCGGCCTGCAGCCCCGATGGAAGGT...CTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGGGCAGCTCCGCCTTGTaGCCATGGAGACCTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAAPVATVALPLPACKAQGSSAL*PWRPRA Trigger: AGCCCGAGGTCTCCATGGGCACAAGGCGGAGCTGCC...CTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | GATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTAGGGGTACCTTCCATCGGGGCTaGAGGCCGGGCCTGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSAWQRQISAVCKALARGTFHRG*RPGLPG Trigger: CCCCGGCAGGCCCGGCCTGCAGCCCCGATGGAAGGT...ACCCCTAGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGTCACTGCTACTCCTGCTaGGCTGCGCCGGCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPQLLCPFLLARPSCHCYSC*AAPAQH Trigger: ATGCTGAGCCGGCGCAGCTCAGCAGGAGTAGCAGTG...ACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGGCATACAGGAGCCCATaGAGAGCAGCTACACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAPVATVALPLPACKAQAYRSP*RAATPR Trigger: CCTAGGTGTAGCTGCTCTGCATGGGCTCCTGTATGC...CTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | CGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGCGGATATTCATGGGTaGCACACTCTCCCAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RCSCCHSCSAPSCLQGPAADIHG*HTLPGT Trigger: GGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGC...AGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGTGCTCAGGCAGCAGGTaGAACTTAAGGGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAAPVATVALPLPACKAQCSGSR*NLRASM Trigger: CATCGAGGCCCTTAAGTTCCACCTGCTGCCTGAGCA...CTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR TCA 90 bp | AGCACCGCCACGCCCACACTGCTGCGTCTTGTGAACATGCAGGATGCCGCCACCGAGCAGGTCACTGCATaGGTGTGTGTCTGCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: STATPTLLRLVNMQDAATEQVTA*VCVCKS Trigger: GGATTTGCAGACACACACTCATGCAGTGACCTGCTC...GGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGGCGTGGCGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CAA 72 bp | CTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCCACAGTaGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRKPLPLLLLPQ*LCPFLLARPSC Trigger: ACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGTTTGTGTGCCACACTGTaGCCCTCTCTGCTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPQLLCPFLLARPSCLCATL*PSLLNS Trigger: GCTGTTGAGCAGAGAGGGTCACAGTGTGGCACACAA...ACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCACACCGTAGCCAGGTCTaGGGTTCCATCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LARPSCVAHPPSVSVYPAHRSQV*GSIVAA Trigger: GGCGGCTACGATGGAACCTCAGACCTGGCTACGGTG...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAGGCCCCGGGCTGCTGTaGTCGGGACTTTGCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVYPAFSIVPQRETGKRGPGLL*SGLCVL Trigger: CAGGACGCAAAGTCCCGAGCACAGCAGCCCGGGGCC...TCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | CATACAGGGCACCCTCCAGCACTGCTACTCCTGCTGAGCTGCGCCGGCTCAGCATGCGGGTCAATGTCATaGAGTGTCACATGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTGHPPALLLLLSCAGSACGSMS*SVTCVW Trigger: CCAGACACATGTGACACTGCATGACATTGACCCGCA...TGCTGAGCCGGCGCAGCTCAGCAGGAGTAGCAGTGCTGGAGGGTGCCCTGTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGGATCTCAGCTGTGTATaGAAACTGCACCAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAAPVATVALPLPACKAQDLSCV*KLHQLV Trigger: GACCAGCTGGTGCAGTTTGCATACACAGCTGAGATC...CTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTAGGGGTCTGCTACTCCTGCTGAGCTaGGCCGGCTCAGCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAWQRQISAVCKALARGLLLLLS*AGSAWK Trigger: CTTCCATGCTGAGCCGGCGCAGCTCAGCAGGAGTAG...CAGACCCCTAGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | CGCTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTCTTTCGGCATCCACGTaGCCCAGGAGGAAGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RWLGVCIIFLESPCRCSCLSAST*PRRKSR Trigger: CCGAGACTTCCTCCTGGGCCACGTGGATGCCGAAAG...ACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGCTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACACCGTAGCCAGGTCTaGGGTTCCATCGTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPACKAQLCCSSSFSECLHRSQV*GSIVAA Trigger: GGCGGCTACGATGGAACCTCAGACCTGGCTACGGTG...TAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCATGGAGGCCACCACATaGCAACGGTCAGTCCGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPRPRPKDRKSLVGYVICMEATT*QRSVRV Trigger: CACGCGGACTGACCGTTGGCATGTGGTGGCCTCCAT...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | CCTCGGGTTGTACTTCTCTATGGAGTTGAGGCTGGAGCTGCCGTCATTGCCCCCATGGAGACCTCGGGCTaGCATGTGTTTGTCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVVLLYGVEAGAAVIAPMETSG*HVFVTG Trigger: CCCTGTGACAAACACATGGCAGCCCGAGGTCTCCAT...GGGGGCAATGACGGCAGCTCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACGGCAGCTCCGCCTTGTaGCCATGGAGACCTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLPSILYCPTEGDRQENGSSAL*PWRPRA Trigger: AGCCCGAGGTCTCCATGGGCACAAGGCGGAGCTGCC...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | GTCCATGAATTCACCTGGGGCTCATACTTCTCCACGGTGGCCAGGTGTGACGAGCCAGCACCTGTGTGCTaGCTTGAGCAGGTCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHEFTWGSYFSTVARCDEPAPVC*LEQVTA Trigger: TGCAGTGACCTGCTCAAGGCAGCACACAGGTGCTGG...CTCGTCACACCTGGCCACCGTGGAGAAGTATGAGCCCCAGGTGAATTCATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CAA 72 bp | ATGCAGGATGCCGCCACCCACTTGTTGGTCCTCGGGTaGTACTTCTCTATGGAGTTGAGGCTGGAGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MQDAATHLLVLG*YFSMELRLELP Trigger: CGGCAGCTCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CCCACACTGCTGCGTCTTGTGAACATGCAGGATGCCGCCACCCACTTGTTGGTCATGGTAGTGCCGCTTTaGGTTGTGTGCCACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLLRLVNMQDAATHLLVMVVPL*VVCHTV Trigger: CACAGTGTGGCACACAACTCAAAGCGGCACTACCAT...GACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTAAGGTGGTGGGAAGTTaGGCAGCTCCAGCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKAQLCCSSSFSECLPSIKVVGS*AAPAPP Trigger: TGGCGGTGCTGGAGCTGCTCAACTTCCCACCACCTT...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | ACATGGAGGCCACCACATGCCAACGGTCAGTCCGCGTGTCATACGCTTCACAGTGGCTCAGGAGGAACTTaGAGCAGGCATCTCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TWRPPHANGQSACHTLHSGSGGT*SRHLEH Trigger: GTGTTCGAGATGCCTGCTGCAAGTTCCTCCTGAGCC...ACTGTGAAGCGTATGACACGCGGACTGACCGTTGGCATGTGGTGGCCTCCATGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTAGGGGTCTGATCGTAGCCACCAGCTaGATACAGGAGCCCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAWQRQISAVCKALARGLIVATS*IQEPMQ Trigger: CTGCATGGGCTCCTGTATGCAGCTGGTGGCTACGAT...CAGACCCCTAGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTGAGCCCGGATCTCCTTaGCAGCCACATGCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: CKAQLCCSSSFSECLPSIEPGSP*QPHAGR Trigger: TCGTCCTGCATGTGGCTGCCAAGGAGATCCGGGCTC...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTGAGCCCGGATCTCCTTaGCAGCCACATGCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: FRDSAWQRQISAVCKALAEPGSP*QPHAGR Trigger: TCGTCCTGCATGTGGCTGCCAAGGAGATCCGGGCTC...AGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CCA 90 bp | GCCGTACTGTTGAGGTGCTGTGTGCACAACCCCTGGGGCTACACTCCTGGAATAGCAAACTGCACCAGCTaGTCTAAGGCTTGCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVLLRCCVHNPWGYTPGIANCTS*SKACGS Trigger: TGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGC...TATTCCAGGAGTGTAGCCCCAGGGGTTGTGCACACAGCACCTCAACAGTACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR CCA 90 bp | GGATGCCGCCACCCACTTGTTGGTCCTCGGGTTGTACTTCTCTATGGAGTTGAGGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GCRHPLVGPRVVLLYGVEASGCS*QQWMSM Trigger: CATGGACATCCATTGCTGCCATGAGCACCCGGAGGC...CTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183129.1 |
||
| 3UTR CAA 72 bp | TATCTCTCCACTGAGTTGAGGCAGCTTGTGCCATCATaGCCCCCTGCGACATACAGGGCACCCTCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: YLSTELRQLVPS*PPATYRAPSST Trigger: AGTGCTGGAGGGTGCCCTGTATGTCGCAGGGGGCAATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | AAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCCACTGCTGCGTCTTGTaGACATGCAGGATGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQLCCSSSFSECLPSILHCCVL*TCRMPP Trigger: TGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTG...GAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTCACAGACAGCGTGGGTaGGGAAGGTGGTGGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRDSAWQRQISAVCKALAHRQRG*GRWWEV Trigger: AACTTCCCACCACCTTCCTCACCCACGCTGTCTGTG...AGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | AACAGCGCACACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAAGGCCCCGGGCTGCTGTaGTCGGGACTTTGCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSAHINERGQMNTETKTEGPGLL*SGLCVL Trigger: CAGGACGCAAAGTCCCGAGCACAGCAGCCCGGGGCC...TTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTGTGCGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTCCACAGGAGGCCACGCTaGCGCATGCGGCTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCVAHPPSVSVYPAFSIVHRRPR*RMRLIA Trigger: GGCTATGAGCCGCATGCGGCAGCGTGGCCTCCTGTG...GACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCACAGCACGTACCTGTGTaGTGCCTTGAGCAGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LARPSCVAHPPSVSVYPAQHVPV*CLEQVT Trigger: AGTGACCTGCTCAAGGCAGCACACAGGTACGTGCTG...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTCCCAGAACACCTCTCTaGTCAGGCAGCAGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRDSAWQRQISAVCKALAPRTPL*SGSRWN Trigger: GTTCCACCTGCTGCCTGAGCAGAGAGGTGTTCTGGG...AGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACGCCATCATTGCCCCCTaGGACATACAGGGCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECLPSILYCPTEGDRQENAIIAP*DIQGTL Trigger: GAGGGTGCCCTGTATGTCGCAGGGGGCAATGATGGC...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCCACGCAAACTGCACCAGCTaGTCTAAGGCTTGCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVCIIFLESPCRCSCCHANCTS*SKACGS Trigger: TGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGC...GTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCCACTTGGAAGGGTCCAGCTaGCTCAGGAGGAACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGVCIIFLESPCRCSCCHLEGSS*LRRNLQ Trigger: CTGCAAGTTCCTCCTGAGCCAGCTGGACCCTTCCAA...GTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CCA 90 bp | CCTCGGGTTGTACTTCTCTATGGAGTTGAGGCTGGAGCTGCCGTCATTGCCCCCCCATGTTCCCGTCAGTaGGTCATATCGTTCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PRVVLLYGVEAGAAVIAPPCSRQ*VISFST Trigger: AGTGCTGAACGATATGACCCACTGACGGGAACATGG...GGGGGCAATGACGGCAGCTCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCCACCCGCCACCCACTTGTTaGTCCTCGGGTTGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVCIIFLESPCRCSCCHPPPTC*SSGCTS Trigger: AGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGG...GTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| 3UTR CAA 72 bp | CATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTaGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHLLRKPLPLLL*PQLLCPFLLAR Trigger: CCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGCTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTATTGTGTGCCACACTGTaGCCCTCTCTGCTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPACKAQLCCSSSFSECLLCATL*PSLLNS Trigger: GCTGTTGAGCAGAGAGGGTCACAGTGTGGCACACAA...TAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCATGGTAGTGCCGCTTTaGGTTGTGTGCCACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPRPRPKDRKSLVGYVICMVVPL*VVCHTV Trigger: CACAGTGTGGCACACAACTCAAAGCGGCACTACCAT...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTACCTGTGTGCTGCCTTaGGCAGGTCACTGCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSCVAHPPSVSVYPAFSTCVLP*AGHCMS Trigger: ACTCATGCAGTGACCTGCTCAAGGCAGCACACAGGT...AGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGTGTCTACGTCATGTTTaGCCCAGCTCAGGACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LARGLHHLLRKPLPLLLLCLRHV*PSSGLH Trigger: GTGCAGTCCTGAGCTGGGTCAAACATGACGTAGACA...CAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTCCTTGCAGTCAGGGTaGTGCCTCACAAGGCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KAQLCCSSSFSECLPSILSLQSG*CLTRLS Trigger: CGAAAGCCTTGTGAGGCATCACCCTGACTGCAAGGA...GAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTGCATACAGGAGCCCATaGAGAGCAGCTACACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKAQLCCSSSFSECLPSIAYRSP*RAATPR Trigger: CCTAGGTGTAGCTGCTCTGCATGGGCTCCTGTATGC...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCAGGTCATGTGTGCTCCTaGGGATATTCATGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LARPSCVAHPPSVSVYPAGHVCS*GYSWVP Trigger: TGGCACCCATGAATATCCGCAGGAGCACACATGACC...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | CTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATGTGAACATGCAGGATaGCGCCACCCACTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LARPSCVAHPPSVSVYPACEHAG*RHPLVG Trigger: ACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACA...TGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTTTGGAAGGGTCCAGCTaGCTCAGGAGGAACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKAQLCCSSSFSECLPSILEGSS*LRRNLQ Trigger: CTGCAAGTTCCTCCTGAGCCAGCTGGACCCTTCCAA...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CCA 90 bp | GTGAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAGCTTCACAGTCTCCGTaGATCGCGAACAGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVYPAFSIVPQRETGKRASQSP*IANRLP Trigger: TGGGAGCCTGTTCGCGATCCACGGAGACTGTGAAGC...TCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCATCCGCCTTGTGCCCATaGAGACCTCGGGCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SASGPWSPRNMFIVQVGSSALCP*RPRAAM Trigger: CATGGCAGCCCGAGGTCTCCATGGGCACAAGGCGGA...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | GTGAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSVYPAFSIVPQRETGKRASGCS*QQWMSM Trigger: CATGGACATCCATTGCTGCCATGAGCACCCGGAGGC...TCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| 3UTR CAA 72 bp | CGTCTTGTGAACATGCAGGATGCCGCCACCCACTTGTaGGTCCTCGGGTTGTACTTCTCTATGGAGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVNMQDAATHL*VLGLYFSMELR Trigger: CCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CAA 72 bp | CTGCGTCTTGTGAACATGCAGGATGCCGCCACCCACTaGTTGGTCCTCGGGTTGTACTTCTCTATGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLVNMQDAATH*LVLGLYFSMEL Trigger: CAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| 3UTR CAA 72 bp | CTTGGTACATGCTGCCTCCGAGTGTCTACGTCATGTTaGACCCAGCTCAGGACTGCACGGTACACATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTCCLRVSTSC*TQLRTARYTSS Trigger: GGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTCAAACATGACGTAGACACTCGGAGGCAGCATGTACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| 3UTR CAA 72 bp | GGCTCAGCAGAGGCAGCCGTACACACTTCATCAACCTaGGTACATGCTGCCTCCGAGTGTCTACGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSAEAAVHTSST*VHAASECLRHV Trigger: AACATGACGTAGACACTCGGAGGCAGCATGTACCAAGGTTGATGAAGTGTGTACGGCTGCCTCTGCTGAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGCTTGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTAGAGCAGGTCACTGCATaGGTGTGTGTCTGCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPACKAQLCCSSSFSECLEQVTA*VCVCKS Trigger: GGATTTGCAGACACACACTCATGCAGTGACCTGCTC...TAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCAAGCAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | TGCAAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTGCTATATCTCTCCACTaGGTTGAGGCAGCTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CKAQLCCSSSFSECLPSIAISLH*VEAACA Trigger: GGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGC...AATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | CTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGGCTGTGTATGCAAACTaGACCAGCTGGTCTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LARGLHHLLRKPLPLLLLAVYAN*TSWSKA Trigger: AGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGC...CAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | CGCCACCCACTTGTTGGTCCTCGGGTTGTACTTCTCTATGGAGTTGAGGCTGGAGATCTCAGCTGTGTATaGAAACTGCACCAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHPLVGPRVVLLYGVEAGDLSCV*KLHQLV Trigger: GACCAGCTGGTGCAGTTTGCATACACAGCTGAGATC...TCCAGCCTCAACTCCATAGAGAAGTACAACCCGAGGACCAACAAGTGGGTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | GGACAAATGAACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTAATCGTAGCCACCAGCTaGATACAGGAGCCCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQMNTETKTEGQEISGGLIVATS*IQEPMQ Trigger: CTGCATGGGCTCCTGTATGCAGCTGGTGGCTACGAT...TAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGTTCATTTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGTGCTCATGGCAGCAATaGATGTCCATGTTCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LARGLHHLLRKPLPLLLLCSWQQ*MSMFPS Trigger: TGACGGGAACATGGACATCCATTGCTGCCATGAGCA...CAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACTCCTGCGGATATTCATaGGTGCCACACTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECLPSILYCPTEGDRQENSCGYS*VPHSPR Trigger: CCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGA...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACACTAGGACACAGACAGCGTaGGTGAGGAAGGTGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSILYCPTEGDRQENTRTQTA*VRKVVG Trigger: TCCCACCACCTTCCTCACCCACGCTGTCTGTGTCCT...AGTGTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR TCA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCCACTCATCTCATTTGTaGACATGGCGTGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPRPRPKDRKSLVGYVICHSSHL*TWRGSR Trigger: CCTACTTCCACGCCATGTTCACAAATGAGATGAGTG...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | AAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCGCTGTGTATGCAAACTaGACCAGCTGGTCTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQLCCSSSFSECLPSILAVYAN*TSWSKA Trigger: AGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGC...GAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACCTGCAAATCCTCGAATaGCCAGGCAGTTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ECLPSILYCPTEGDRQENLQILE*PGSWKG Trigger: ACCCTTCCAACTGCCTGGGCATTCGAGGATTTGCAG...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | TGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACACTCACGTACCTGTGTGCTaGCTTGAGCAGGTCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSILYCPTEGDRQENTHVPVC*LEQVTA Trigger: TGCAGTGACCTGCTCAAGGCAGCACACAGGTACGTG...AGTGTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | TGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACACTATGGAGACCTCGGGCTaGCATGTGTTTGTCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSILYCPTEGDRQENTMETSG*HVFVTG Trigger: CCCTGTGACAAACACATGGCAGCCCGAGGTCTCCAT...AGTGTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | AAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCAGGCACCAGCCTTGGTaGTATATCTCTCCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAQLCCSSSFSECLPSILRHQPW*YISPLS Trigger: ACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCT...GAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | TCATATTGCTGTGTAGGATCTAAGTGCATGTTGTGTGCCCAGCTCCATAGAAGATCCGCCTTGTGCCCATaGAGACCTCGGGCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SYCCVGSKCMLCAQLHRRSALCP*RPRAAM Trigger: CATGGCAGCCCGAGGTCTCCATGGGCACAAGGCGGA...TCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGTTGGCTCATATTGCTGTGTAGGATCTAAGTGCATGTTGTGTGCCCAGAGAGCCAGCCGTCCATaGCCACCAGGTCATGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQVGSYCCVGSKCMLCAQRASRP*PPGHVC Trigger: GCACACATGACCTGGTGGCCATGGACGGCTGGCTCT...CTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGAGCCAACTTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR TCA 90 bp | AACAGCGCACACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAAGCCAACACCACCTTATaGGCCCGGATCTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSAHINERGQMNTETKTEANTTL*ARISLA Trigger: TGCCAAGGAGATCCGGGCTCATAAGGTGGTGTTGGC...TTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTGTGCGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | AAGGCCCAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCCACTCATCTCATTTGTaGACATGGCGTGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAQLCCSSSFSECLPSILHSSHL*TWRGSR Trigger: CCTACTTCCACGCCATGTTCACAAATGAGATGAGTG...GAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTGGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTCGGCTCAGGAGGAACTTaGAGCAGGCATCTCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SCVAHPPSVSVYPAFSIVGSGGT*SRHLEH Trigger: GTGTTCGAGATGCCTGCTGCAAGTTCCTCCTGAGCC...GACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTCGCCACATCCACGAAGTaGTGCAGCACGTACCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCVAHPPSVSVYPAFSIVATSTK*CSTYLC Trigger: ACACAGGTACGTGCTGCAGCACTTCGTGGATGTGGC...GACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCAGACCCAGCTCAGGACTaGACGGTACACATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASGPWSPRNMFIVQVGSDPAQD*TVHIFL Trigger: GAGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTC...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACCCATGTTCCCGTCAGTaGGTCATATCGTTCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ECLPSILYCPTEGDRQENPCSRQ*VISFST Trigger: AGTGCTGAACGATATGACCCACTGACGGGAACATGG...GTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCACATACTTCTCCACGGTaGCCAGGTGTGACGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SASGPWSPRNMFIVQVGSHTSPR*PGVTSC Trigger: ACAGCTCGTCACACCTGGCCACCGTGGAGAAGTATG...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCAACATCCACGAAGTGCTaGAGCACGTACCTGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SASGPWSPRNMFIVQVGSTSTKC*STYLCA Trigger: AGCACACAGGTACGTGCTGCAGCACTTCGTGGATGT...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCATCAACTGTAGAAGGCTaGCAGCTGGGAGCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SASGPWSPRNMFIVQVGSSTVEG*QLGAES Trigger: AGACTCTGCTCCCAGCTGCCAGCCTTCTACAGTTGA...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGAACACTTGCTCATGGCAGCAATaGATGTCCATGTTCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSILYCPTEGDRQENTCSWQQ*MSMFPS Trigger: TGACGGGAACATGGACATCCATTGCTGCCATGAGCA...AGTGTTCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTCAGGCCCATGGAGCCCAAGAAACATGTTTATTGTTCAAGTTGGCTCAAGCTACAGGTGTCCATaGATTCACCTGGGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SASGPWSPRNMFIVQVGSSYRCP*IHLGLI Trigger: TATGAGCCCCAGGTGAATTCATGGACACCTGTAGCT...TGAGCCAACTTGAACAATAAACATGTTTCTTGGGCTCCATGGGCCTGAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR GCA 90 bp | CAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTTGCGGGTCAATGTCATaGAGTGTCACATGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCCSSSFSECLPSILYCCGSMS*SVTCVW Trigger: CCAGACACATGTGACACTGCATGACATTGACCCGCA...ACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR GCA 90 bp | CACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAAGGACAGGAACTGCAAATCCTCGAATaGCCAGGCAGTTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HINERGQMNTETKTEGQELQILE*PGSWKG Trigger: ACCCTTCCAACTGCCTGGGCATTCGAGGATTTGCAG...TTCCTGTCCTTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR TCA 90 bp | AACAGCGCACACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAAATCTCTCCACTGAGTTaGGGCAGCTTGTGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSAHINERGQMNTETKTEISPLS*GSLCHH Trigger: ATGATGGCACAAGCTGCCTCAACTCAGTGGAGAGAT...TTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTGTGCGCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CCA 90 bp | CACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAAGGACAGGAAGTCCATGAATTCACCTaGGGCTCATACTTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HINERGQMNTETKTEGQEVHEFT*GSYFST Trigger: CGTGGAGAAGTATGAGCCCCAGGTGAATTCATGGAC...TTCCTGTCCTTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| 3UTR CAA 72 bp | GTTGGCTCATATTGCTGTGTAGGATCTAAGTGCATGTaGTGTGCCCAGCTCCATAGAAGACCCAGAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGSYCCVGSKCM*CAQLHRRPRKD Trigger: GTCTTTTCTGGGTCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGCAATATGAGCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 ENSMUST00020183325.1 |
||
| CDS CCA 90 bp | AGGGGCTACAGGAGGCCAACACCACCTTATGAGCCCGGATCTCCTTaGCAGCCACATGCAGGACGATGTCGCACAGGAGGCCACGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGYRRPTPPYEPGSP*QPHAGRCRTGGHAA Trigger: GGCAGCGTGGCCTCCTGTGCGACATCGTCCTGCATGTGGCTGCCAAGGAGATCCGGGCTCATAAGGTGGTGTTGGCCTCCTGTAGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS GCA 90 bp | CATGGTAGTGCCGCTTTGAGTTGTGTGCCACACTGTGACCCTCTCTaGTCAACAGCTGCATCGCACCTTCCATCGGGGCTGCAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGSAALSCVPHCDPL*STAASHLPSGLQAG Trigger: CCCGGCCTGCAGCCCCGATGGAAGGTGCGATGCAGCTGTTGAGCAGAGAGGGTCACAGTGTGGCACACAACTCAAAGCGGCACTACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTAGGGGTCTGCTAGGCAGCTCCGCCTaGTGCCCATGGAGACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAWQRQISAVCKALARGLLGSSA*CPWRPR Trigger: CCGAGGTCTCCATGGGCACAAGGCGGAGCTGCCTAG...CAGACCCCTAGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CAA 90 bp | CTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGTTATCGTTCAGCACTGTaGAGGCAGGAAGCCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPQLLCPFLLARPSCYRSAL*RQEAPS Trigger: CGATGGGGCTTCCTGCCTCAACAGTGCTGAACGATA...ACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CAA 90 bp | CGCTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTTACTTCTCTATGGAGTaGAGGCTGGAGCTGCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RCSCCHSCSAPSCLQGPAYFSME*RLELPS Trigger: TGACGGCAGCTCCAGCCTCAACTCCATAGAGAAGTA...AGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS-3UTR CAA 90 bp | CTGCTCCTGTTGCCACAGTTGCTCTGCCCCTTCCTGCTTGCAAGGCCCAGCTGTCATGGTAGTGCCGCTTaGAGTTGTGTGCCACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPQLLCPFLLARPSCHGSAA*SCVPHC Trigger: ACAGTGTGGCACACAACTCAAAGCGGCACTACCATG...ACAGCTGGGCCTTGCAAGCAGGAAGGGGCAGAGCAACTGTGGCAACAGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CAA 90 bp | GTGAGTGTCTACCCAGCATTCTCTATTGTCCCACAGAGGGAGACAGGCAAGAGACTAGGCAGCTCCGCCTaGTGCCCATGGAGACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSVYPAFSIVPQRETGKRLGSSA*CPWRPR Trigger: CCGAGGTCTCCATGGGCACAAGGCGGAGCTGCCTAG...TCTCTTGCCTGTCTCCCTCTGTGGGACAATAGAGAATGCTGGGTAGACACTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CAA 90 bp | CACGCCCACACTGCTGCGTCTTGTGAACATGCAGGATGCCGCCACCCACTTGTTTATCGTTCAGCACTGTaGAGGCAGGAAGCCCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: HAHTAASCEHAGCRHPLVYRSAL*RQEAPS Trigger: CGATGGGGCTTCCTGCCTCAACAGTGCTGAACGATA...AACAAGTGGGTGGCGGCATCCTGCATGTTCACAAGACGCAGCAGTGTGGGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183129.1 |
||
| CDS-3UTR CAA 90 bp | GCCGTACTGTTGAGGTGCTGTGTGCACAACCCCTGGGGCTACACTCCTGGAATACACCTGTGTGCTGCCTaGAGCAGGTCACTGCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVLLRCCVHNPWGYTPGIHLCAA*SRSLHE Trigger: CTCATGCAGTGACCTGCTCAAGGCAGCACACAGGTG...TATTCCAGGAGTGTAGCCCCAGGGGTTGTGCACACAGCACCTCAACAGTACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00020183325.1 |
||
| CDS GCA 90 bp | ACAGGTTCCCATCAAGTGTGGCCACACGCACATATCGCCTCCGGGTaGTCATGGCAGCAATGGATGTCCATGTTCCCGTCAGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGSHQVWPHAHIASG*SWQQWMSMFPSVGH Trigger: ATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGTGCGTGTGGCCACACTTGATGGGAACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS CCA 90 bp | GTGTGGCCACACGCACATATCGCCTCCGGGTGCTCATGGCAGCAATaGATGTCCATGTTCCCGTCAGTGGGTCATATCGTTCAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VWPHAHIASGCSWQQ*MSMFPSVGHIVQHC Trigger: ACAGTGCTGAACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGTGCGTGTGGCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS TCA 90 bp | TGGCCACATCCACGAAGTGCTGCAGCACGTACCTGTGTGCTGCCTTaGGCAGGTCACTGCATGAGTGTGTGTCTGCAAATCCTCGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: WPHPRSAAARTCVLP*AGHCMSVCLQILEC Trigger: GCATTCGAGGATTTGCAGACACACACTCATGCAGTGACCTGCTCAAGGCAGCACACAGGTACGTGCTGCAGCACTTCGTGGATGTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS CCA 90 bp | CCCTCGCCCACCACGATCTCAGCTGTGTATGCAAACTGCACCAGCTaGTCTAAGGCTTGCGGGTCAATGTCATGCAGTGTCACATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSPTTISAVYANCTS*SKACGSMSCSVTCV Trigger: GACACATGTGACACTGCATGACATTGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGCTGAGATCGTGGTGGGCGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS CCA 90 bp | TCCCATCAAGTGTGGCCACACGCACATATCGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATGTTCCCGTCAGTGGGTCATATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHQVWPHAHIASGCS*QQWMSMFPSVGHIV Trigger: AACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGTGCGTGTGGCCACACTTGATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS-3UTR CAA 90 bp | CTGGCTAGGGGTCTGCATCATCTTCTTAGAAAGCCCTTGCCGCTGCTCCTGTTGCGGGCTGCCATGTGTTaGTCACAGGGTCATAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LARGLHHLLRKPLPLLLLRAAMC*SQGHRT Trigger: AGTCCTATGACCCTGTGACAAACACATGGCAGCCCG...CAACAGGAGCAGCGGCAAGGGCTTTCTAAGAAGATGATGCAGACCCCTAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS TCA 90 bp | CCGCATGCGGCTCATAGCCACAAAAGCATCATGGTAGTGCCGCTTTaGGTTGTGTGCCACACTGTGACCCTCTCTGCTCAACAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PHAAHSHKSIMVVPL*VVCHTVTLSAQQLH Trigger: ATGCAGCTGTTGAGCAGAGAGGGTCACAGTGTGGCACACAACTCAAAGCGGCACTACCATGATGCTTTTGTGGCTATGAGCCGCATGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CAA 90 bp | ACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCCATGGTAGTGCCGCTTaGAGTTGTGTGCCACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TPRPRPKDRKSLVGYVICHGSAA*SCVPHC Trigger: ACAGTGTGGCACACAACTCAAAGCGGCACTACCATG...GCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CAA 90 bp | CCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCCCTAACACTTGGCTCAGGAGGAACTaGCAGCAGGCATCTCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PRPKDRKSLVGYVICPNTWLRRN*QQASRT Trigger: TGTTCGAGATGCCTGCTGCAAGTTCCTCCTGAGCCA...AGTGTTAGGGCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CAA 90 bp | CCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTACGTGATCTGCCCTAACACTCGGGCTGCCATGTGTTaGTCACAGGGTCATAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PRPKDRKSLVGYVICPNTRAAMC*SQGHRT Trigger: AGTCCTATGACCCTGTGACAAACACATGGCAGCCCG...AGTGTTAGGGCAGATCACGTAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
||
| CDS TCA 90 bp | GTCATGTTTGACCCAGCTCAGGACTGCACGGTACACATCTTCCTCTaGGGGCACGTTCAGGCTATCACTAGAGACCAATTCCAGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VMFDPAQDCTVHIFL*GHVQAITRDQFQHL Trigger: CAGGTGCTGGAATTGGTCTCTAGTGATAGCCTGAACGTGCCCTCAGAGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTCAAACATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
||
| CDS GCA 90 bp | ACGATCTCAGCTGTGTATGCAAACTGCACCAGCTGGTCTAAGGCTTaGGGGTCAATGTCATGCAGTGTCACATGTGTCTGGCGGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TISAVYANCTSWSKA*GSMSCSVTCVWRLS Trigger: TGAGAGCCGCCAGACACATGTGACACTGCATGACATTGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGCTGAGATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
||
| CDS-3UTR CAA 90 bp | AACAGCGCACACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAACGAATGCCCAGGCAGTaGGAAGGGTCCAGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NSAHINERGQMNTETKTERMPRQ*EGSSWL Trigger: GAGCCAGCTGGACCCTTCCAACTGCCTGGGCATTCG...TTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTGTGCGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAGCGCTGGCTGTGTCTACGTCATGTTaGACCCAGCTCAGGACTGCA | + |
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Preference number: 5 (lower is better) Translates to: FRDSAWQRQISAVCKALAVSTSC*TQLRTA Trigger: TGCAGTCCTGAGCTGGGTCAAACATGACGTAGACAC...AGCCAGCGCTTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS-3UTR CAA 90 bp | CAGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTGATGCCGCCACCCACTaGTTGGTCCTCGGGTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: QLCCSSSFSECLPSILYCDAATH*LVLGLY Trigger: GTACAACCCGAGGACCAACAAGTGGGTGGCGGCATC...ACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS-3UTR CAA 90 bp | CACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAAGGACAGGAAGCCGCCACCCACTTGTaGGTCCTCGGGTTGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: HINERGQMNTETKTEGQEAATHL*VLGLYF Trigger: GAAGTACAACCCGAGGACCAACAAGTGGGTGGCGGC...TTCCTGTCCTTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS-3UTR CAA 90 bp | AGCTGTGTTGCTCATCCTCCTTCAGTGAGTGTCTACCCAGCATTCTCTATTGTCTGGCTCAGGAGGAACTaGCAGCAGGCATCTCGAACA | + |
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Preference number: 5 (lower is better) Translates to: SCVAHPPSVSVYPAFSIVWLRRN*QQASRT Trigger: TGTTCGAGATGCCTGCTGCAAGTTCCTCCTGAGCCA...GACAATAGAGAATGCTGGGTAGACACTCACTGAAGGAGGATGAGCAACACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS-3UTR CAA 90 bp | GGACAAATGAACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTATATCTCTCCACTGAGTaGAGGCAGCTTGTGCCATCA | + |
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Preference number: 5 (lower is better) Translates to: GQMNTETKTEGQEISGGLYLSTE*RQLVPS Trigger: TGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATA...TAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGTTCATTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS-3UTR CAA 90 bp | AACAGCGCACACATAAATGAACGAGGACAAATGAACACCGAGACCAAGACCGAATACCTGTGTGCTGCCTaGAGCAGGTCACTGCATGAG | + |
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Preference number: 5 (lower is better) Translates to: NSAHINERGQMNTETKTEYLCAA*SRSLHE Trigger: CTCATGCAGTGACCTGCTCAAGGCAGCACACAGGTA...TTCGGTCTTGGTCTCGGTGTTCATTTGTCCTCGTTCATTTATGTGTGCGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS-3UTR CAA 90 bp | TTTGTGTCCTTCAGGGATAGTGCCTGGCAGAGACAGATAAGTGCTGTGTGCAAAATGAACTCCTCAGTCTaGGCCACATCCACGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: FVSFRDSAWQRQISAVCKMNSSV*ATSTKC Trigger: GCACTTCGTGGATGTGGCCAAGACTGAGGAGTTCAT...TTTGCACACAGCACTTATCTGTCTCTGCCAGGCACTATCCCTGAAGGACACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS-3UTR CAA 90 bp | GGACAAATGAACACCGAGACCAAGACCGAAGGACAGGAAATCTCTGGTGGGCTATTGTTGGTCCTCGGGTaGTACTTCTCTATGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GQMNTETKTEGQEISGGLLLVLG*YFSMEL Trigger: CAACTCCATAGAGAAGTACAACCCGAGGACCAACAA...TAGCCCACCAGAGATTTCCTGTCCTTCGGTCTTGGTCTCGGTGTTCATTTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS GCA 72 bp | TCAGGCCCGGGCCCCGGGCTGCTGTGCTCGGGACTTTaGGTCCTGCCCGCCGGCCGCTCGCCACGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGPGPGLLCSGL*VLPAGRSPRGC Trigger: GCAGCCCCGTGGCGAGCGGCCGGCGGGCAGGACGCAAAGTCCCGAGCACAGCAGCCCGGGGCCCGGGCCTGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS CAA 72 bp | CTCAGGCCCGGGCCCCGGGCTGCTGTGCTCGGGACTTaGCGTCCTGCCCGCCGGCCGCTCGCCACGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRPGPRAAVLGT*RPARRPLATGL Trigger: CAGCCCCGTGGCGAGCGGCCGGCGGGCAGGACGCAAAGTCCCGAGCACAGCAGCCCGGGGCCCGGGCCTGAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS GCA 72 bp | TCTGCTCAACAGCTGCATCGCACCTTCCATCGGGGCTaGAGGCCGGGCCTGCCGGGGCCGAGCTCGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SAQQLHRTFHRG*RPGLPGPSSLC Trigger: GCAGAGCGAGCTCGGCCCCGGCAGGCCCGGCCTGCAGCCCCGATGGAAGGTGCGATGCAGCTGTTGAGCAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS GCA 72 bp | GCCACATGCAGGACGATGTCGCACAGGAGGCCACGCTaGCGCATGCGGCTCATAGCCACAAAAGCATCATGG | + |
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Preference number: 6 (lower is better) Translates to: ATCRTMSHRRPR*RMRLIATKASW Trigger: CCATGATGCTTTTGTGGCTATGAGCCGCATGCGGCAGCGTGGCCTCCTGTGCGACATCGTCCTGCATGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS TCA 72 bp | CTCCTGGGGCTCATACTTCTCCACGGTGGCCAGGTGTaGCGAGCTGTCATAACCACCCACGGCGTACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LLGLILLHGGQV*RAVITTHGVQV Trigger: AACCTGTACGCCGTGGGTGGTTATGACAGCTCGTCACACCTGGCCACCGTGGAGAAGTATGAGCCCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00020183129.1 |
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| CDS CCA 72 bp | GTGTGGCCACACGCACATATCGCCTCCGGGTGCTCATaGCAGCAATGGATGTCCATGTTCCCGTCAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VWPHAHIASGCS*QQWMSMFPSVG Trigger: ACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGTGCGTGTGGCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| CDS CCA 72 bp | CATAACCACCCACGGCGTACAGGTTCCCATCAAGTGTaGCCACACGCACATATCGCCTCCGGGTGCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: HNHPRRTGSHQV*PHAHIASGCSW Trigger: CCATGAGCACCCGGAGGCGATATGTGCGTGTGGCCACACTTGATGGGAACCTGTACGCCGTGGGTGGTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| CDS GCA 72 bp | CCCTCGCCCACCACGATCTCAGCTGTGTATGCAAACTaGACCAGCTGGTCTAAGGCTTGCGGGTCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSPTTISAVYAN*TSWSKACGSMS Trigger: TGACATTGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGCTGAGATCGTGGTGGGCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS GCA 72 bp | AGCATGAACTCCTCAGTCTTGGCCACATCCACGAAGTaGTGCAGCACGTACCTGTGTGCTGCCTTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SMNSSVLATSTK*CSTYLCAALSR Trigger: CCTGCTCAAGGCAGCACACAGGTACGTGCTGCAGCACTTCGTGGATGTGGCCAAGACTGAGGAGTTCATGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS GCA 72 bp | CATCAAGTGTGGCCACACGCACATATCGCCTCCGGGTaGTCATGGCAGCAATGGATGTCCATGTTCCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: HQVWPHAHIASG*SWQQWMSMFPS Trigger: TGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGTGCGTGTGGCCACACTTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| CDS CAA 90 bp | CTCCTGCGGATATTCATGGGTGCCACACTCTCCCAGGCACCAGCCTaGGTGCTATATCTCTCCACTGAGTTGAGGCAGCTTGTGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LLRIFMGATLSQAPA*VLYLSTELRQLVPS Trigger: TGATGGCACAAGCTGCCTCAACTCAGTGGAGAGATATAGCACCAAGGCTGGTGCCTGGGAGAGTGTGGCACCCATGAATATCCGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS GCA 72 bp | TGCACCAGCTGGTCTAAGGCTTGCGGGTCAATGTCATaGAGTGTCACATGTGTCTGGCGGCTCTCACTCATC | + |
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Preference number: 6 (lower is better) Translates to: CTSWSKACGSMS*SVTCVWRLSLI Trigger: GATGAGTGAGAGCCGCCAGACACATGTGACACTGCATGACATTGACCCGCAAGCCTTAGACCAGCTGGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS GCA 72 bp | ATGAACTCCTCAGTCTTGGCCACATCCACGAAGTGCTaGAGCACGTACCTGTGTGCTGCCTTGAGCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: MNSSVLATSTKC*STYLCAALSRS Trigger: TGACCTGCTCAAGGCAGCACACAGGTACGTGCTGCAGCACTTCGTGGATGTGGCCAAGACTGAGGAGTTCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS CCA 72 bp | CACGCACATATCGCCTCCGGGTGCTCATGGCAGCAATaGATGTCCATGTTCCCGTCAGTGGGTCATATCGTT | + |
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Preference number: 6 (lower is better) Translates to: HAHIASGCSWQQ*MSMFPSVGHIV Trigger: AACGATATGACCCACTGACGGGAACATGGACATCCATTGCTGCCATGAGCACCCGGAGGCGATATGTGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183129.1 |
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| CDS CAA 72 bp | ACCTGCTTCAGTGGCAACAGCATGAACTCCTCAGTCTaGGCCACATCCACGAAGTGCTGCAGCACGTACCTG | + |
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Preference number: 6 (lower is better) Translates to: TCFSGNSMNSSV*ATSTKCCSTYL Trigger: CAGGTACGTGCTGCAGCACTTCGTGGATGTGGCCAAGACTGAGGAGTTCATGCTGTTGCCACTGAAGCAGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS CAA 90 bp | TTGGCCACATCCACGAAGTGCTGCAGCACGTACCTGTGTGCTGCCTaGAGCAGGTCACTGCATGAGTGTGTGTCTGCAAATCCTCGAATG | + |
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Preference number: 6 (lower is better) Translates to: LATSTKCCSTYLCAA*SRSLHECVSANPRM Trigger: CATTCGAGGATTTGCAGACACACACTCATGCAGTGACCTGCTCAAGGCAGCACACAGGTACGTGCTGCAGCACTTCGTGGATGTGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS TCA 72 bp | GACCCAGCTCAGGACTGCACGGTACACATCTTCCTCTaGGGGCACGTTCAGGCTATCACTAGAGACCAATTC | + |
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Preference number: 6 (lower is better) Translates to: DPAQDCTVHIFL*GHVQAITRDQF Trigger: GAATTGGTCTCTAGTGATAGCCTGAACGTGCCCTCAGAGGAAGATGTGTACCGTGCAGTCCTGAGCTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS GCA 72 bp | GGCAGTTGGAAGGGTCCAGCTGGCTCAGGAGGAACTTaGAGCAGGCATCTCGAACACCATTCAACTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GSWKGPAGSGGT*SRHLEHHSTVE Trigger: TTCTACAGTTGAATGGTGTTCGAGATGCCTGCTGCAAGTTCCTCCTGAGCCAGCTGGACCCTTCCAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS TCA 72 bp | AGACCAATTCCAGCACCTGCTTCAGTGGCAACAGCATaGACTCCTCAGTCTTGGCCACATCCACGAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: RPIPAPASVATA*TPQSWPHPRSA Trigger: AGCACTTCGTGGATGTGGCCAAGACTGAGGAGTTCATGCTGTTGCCACTGAAGCAGGTGCTGGAATTGGTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105569.5 |
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| CDS GCA 72 bp | GCTGTGTATGCAAACTGCACCAGCTGGTCTAAGGCTTaGGGGTCAATGTCATGCAGTGTCACATGTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AVYANCTSWSKA*GSMSCSVTCVW Trigger: CCAGACACATGTGACACTGCATGACATTGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS CCA 72 bp | GCTTGCGGGTCAATGTCATGCAGTGTCACATGTGTCTaGCGGCTCTCACTCATCTCATTTGTGAACATGGCG | + |
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Preference number: 6 (lower is better) Translates to: ACGSMSCSVTCV*RLSLISFVNMA Trigger: CGCCATGTTCACAAATGAGATGAGTGAGAGCCGCCAGACACATGTGACACTGCATGACATTGACCCGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS CCA 72 bp | ACCACGATCTCAGCTGTGTATGCAAACTGCACCAGCTaGTCTAAGGCTTGCGGGTCAATGTCATGCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TTISAVYANCTS*SKACGSMSCSV Trigger: GACACTGCATGACATTGACCCGCAAGCCTTAGACCAGCTGGTGCAGTTTGCATACACAGCTGAGATCGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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| CDS TCA 72 bp | GCTCATAGCCACAAAAGCATCATGGTAGTGCCGCTTTaGGTTGTGTGCCACACTGTGACCCTCTCTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: AHSHKSIMVVPL*VVCHTVTLSAQ Trigger: TTGAGCAGAGAGGGTCACAGTGTGGCACACAACTCAAAGCGGCACTACCATGATGCTTTTGTGGCTATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105569.5 ENSMUST00020183325.1 |
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