Pregenerated sensors for KLHL15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043929Ensembl transcript IDs: ENSMUST00000096369.10, ENSMUST00000113908.8, ENSMUST00000113911.9, ENSMUST00000113915.2, ENSMUST00000113916.10, ENSMUST00000153900.8, ENSMUST00000170594.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACACTGGAAGAGTTGCTGGCCCACACTCAACACCTGCAGCAGCCTaGAGAGAAACAATGGGAGCCGCACTTCCTTTTCAGGGCTTTTAC | + |
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Preference number: 1 (lower is better) Translates to: HTGRVAGPHSTPAAA*RETMGAALPFQGFY Trigger: GTAAAAGCCCTGAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGTGTGGGCCAGCAACTCTTCCAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR CCA 90 bp | CAGTATAACTCATTCCTTACCTCTCAGTCAAAGCTGAGCTCACACTaGAAGAGTTGCTGGCCCACACTCAACACCTGCAGCAGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: QYNSFLTSQSKLSSH*KSCWPTLNTCSSLE Trigger: CTCCAGGCTGCTGCAGGTGTTGAGTGTGGGCCAGCAACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGGTAAGGAATGAGTTATACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR GCA 90 bp | TCATTCCTTACCTCTCAGTCAAAGCTGAGCTCACACTGGAAGAGTTaGTGGCCCACACTCAACACCTGCAGCAGCCTGGAGAGAAACAAT | + |
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Preference number: 1 (lower is better) Translates to: SFLTSQSKLSSHWKS*WPTLNTCSSLERNN Trigger: ATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGTGTGGGCCAGCAACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGGTAAGGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR GCA 90 bp | GACAGAGTCTCTCTGCATAGCCTTAGATACACAGTTTCAGGAACTTaGTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCTGGGATCAAA | + |
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Preference number: 1 (lower is better) Translates to: DRVSLHSLRYTVSGT*CVDQAGLCLSAGIK Trigger: TTTGATCCCAGCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTATCTAAGGCTATGCAGAGAGACTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR TCA 90 bp | GCTGCGCTCTCTCCTTTGGGCAAGAATGGATCACAAGTGAGACTCTaGTATAGAAATGAAGATGCTTGTATGCAAAAAGGCCAAGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: AALSPLGKNGSQVRL*YRNEDACMQKGQGC Trigger: ACAACCTTGGCCTTTTTGCATACAAGCATCTTCATTTCTATATCAGAGTCTCACTTGTGATCCATTCTTGCCCAAAGGAGAGAGCGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR TCA 90 bp | TTACTGAAGCTGCGCTCTCTCCTTTGGGCAAGAATGGATCACAAGTaGGACTCTGATATAGAAATGAAGATGCTTGTATGCAAAAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LLKLRSLLWARMDHK*DSDIEMKMLVCKKA Trigger: GGCCTTTTTGCATACAAGCATCTTCATTTCTATATCAGAGTCTCACTTGTGATCCATTCTTGCCCAAAGGAGAGAGCGCAGCTTCAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR CCA 90 bp | TTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCTaGGATCAAAGGCATATACCATTTTATCTGAAGTATTTATTTGCC | + |
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Preference number: 1 (lower is better) Translates to: FRNLLCRSGWPLPKC*DQRHIPFYLKYLFA Trigger: GGCAAATAAATACTTCAGATAAAATGGTATATGCCTTTGATCCCAGCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR CCA 90 bp | CAGCCATATAGAAGGCATTGCAATATTGCACCAAAATCAGAGATCTaGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTC | + |
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Preference number: 1 (lower is better) Translates to: QPYRRHCNIAPKSEI*QAMPVLAFLTYRLL Trigger: GAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCTGATTTTGGTGCAATATTGCAATGCCTTCTATATGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR GCA 90 bp | AGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTaGTGGGATCAAAGGCATATACCATTTTATCTGAAGTATTTATTT | + |
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Preference number: 1 (lower is better) Translates to: SFRNLLCRSGWPLPK*WDQRHIPFYLKYLF Trigger: AAATAAATACTTCAGATAAAATGGTATATGCCTTTGATCCCAGCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR TCA 90 bp | AAGAATATTCAATTGTTTGTGCAGATGTTAACCTACACAGGACTATaGAGTTGTAACAAAGCAATTACAGAGAACTGCCCCTGGAATATA | + |
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Preference number: 1 (lower is better) Translates to: KNIQLFVQMLTYTGL*SCNKAITENCPWNI Trigger: TATATTCCAGGGGCAGTTCTCTGTAATTGCTTTGTTACAACTTCATAGTCCTGTGTAGGTTAACATCTGCACAAACAATTGAATATTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCTGCAGGGTCAGAGCTTaGCACAGACCACTCCGATTC | + |
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Preference number: 2 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFCRVRA*HRPLRF Trigger: GAATCGGAGTGGTCTGTGTCAAGCTCTGACCCTGCA...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR CAA 90 bp | CTCATTCCTTACCTCTCAGTCAAAGCTGAGCTCACACTGGAAGAGTaGCTGGCCCACACTCAACACCTGCAGCAGCCTGGAGAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LIPYLSVKAELTLEE*LAHTQHLQQPGEKQ Trigger: TTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGTGTGGGCCAGCAACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGGTAAGGAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCGACGATAGACTACTCTaGTACCAAATGAGGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFDDRLL*YQMRTP Trigger: TGGAGTCCTCATTTGGTATCAGAGTAGTCTATCGTC...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTACAGTTTCAGGAACTTaGTGTGTAGATCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWATVSGT*CVDQAG Trigger: GCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGT...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR CCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCCTGCGCTCTCTCCTTTaGGCAAGAATGGATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCLRSLL*ARMDHK Trigger: CTTGTGATCCATTCTTGCCCAAAGGAGAGAGCGCAG...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAAACCACCGCTATGTTGTaGGTGCAAAAGGAAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: IRLRQEDALSMRPDWALETTAML*VQKEIS Trigger: GCTGATTTCCTTTTGCACCCACAACATAGCGGTGGT...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR CCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCCTCTGCCTAAGTGCTaGGATCAAAGGCATATACCA | + |
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Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWAPLPKC*DQRHIP Trigger: TGGTATATGCCTTTGATCCCAGCACTTAGGCAGAGG...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCAAACTACTCCTTTCTTaGCTCCTGACCAACTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCKLLLS*LLTNSG Trigger: CCCAGAGTTGGTCAGGAGTCAAGAAAGGAGTAGTTT...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR GCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAACCGCTATGTTGTGGGTaGAAAAGGAAATCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: IRLRQEDALSMRPDWALEPLCCG*KRKSAS Trigger: ACTTGCTGATTTCCTTTTGCACCCACAACATAGCGG...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR CCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTTCCTTTGGGCAAGAATaGATCACAAGTGAGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWASFGQE*ITSETL Trigger: CAGAGTCTCACTTGTGATCCATTCTTGCCCAAAGGA...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTAACATGCCAGGCTGCTaGGTATTATTTAAAGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWANMPGC*VLFKGT Trigger: TGTGCCTTTAAATAATACTCAGCAGCCTGGCATGTT...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAATACTTCTATCTAAATTaGAACTGGGGGACAAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: IRLRQEDALSMRPDWALEYFYLN*NWGTRC Trigger: GCACCTTGTCCCCCAGTTTCAATTTAGATAGAAGTA...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAACTGAGTGCTTTAGCATaGAGGATATCCATCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: IRLRQEDALSMRPDWALELSALA*RISINQ Trigger: TTGGTTGATGGATATCCTCCATGCTAAAGCACTCAG...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTGGGTACTTGAAAAGTTaGACTATTCTACTACCTACC | + |
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Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWAGYLKS*TILLPT Trigger: GGTAGGTAGTAGAATAGTTCAACTTTTCAAGTACCC...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTTATAAAGACAAACCATaGATCCCCAGAGAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWAYKDKP*IPRERE Trigger: CTCTCTTTCTCTGGGGATTCATGGTTTGTCTTTATA...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTGAAAATGGCCTTGTTTaGGACCTGCAATATTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: YLIRLRQEDALSMRPDWAENGLV*DLQYFE Trigger: TTCAAAATATTGCAGGTCTCAAACAAGGCCATTTTC...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCTCACAAGTGAGACTCTaGTATAGAAATGAAGATGCT | + |
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Preference number: 2 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCSQVRL*YRNEDA Trigger: AGCATCTTCATTTCTATATCAGAGTCTCACTTGTGA...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR GCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCATGAAGATGCTTGTATaGAAAAAGGCCAAGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCMKMLV*KKAKVV Trigger: AACAACCTTGGCCTTTTTGCATACAAGCATCTTCAT...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR GCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCAATGATAAAACCAAATaGCTAGTGAGTGGGGATAAC | + |
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Preference number: 2 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCNDKTK*LVSGDN Trigger: GTTATCCCCACTCACTAGGCATTTGGTTTTATCATT...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACATGGCGAACTGTCTGTaGAAGTGCACTAGCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RDLASYASVSFPHIQTTHMANCL*KCTSLK Trigger: TTTTAAGCTAGTGCACTTGCACAGACAGTTCGCCAT...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | GACATCTCTCTAGTGCCAAAGACTATTTTTGTACAAACTGAACAAGCCGTTACACCTCTCAGTCAAAGCTaGGCTCACACTGGAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: DISLVPKTIFVQTEQAVTPLSQS*AHTGRV Trigger: AACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGG...TGTAACGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCACTAGAGAGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR GCA 90 bp | GACATCTCTCTAGTGCCAAAGACTATTTTTGTACAAACTGAACAAGCCGTTACAGTCTTTAAAAGTGCGTaGATGATGCAGGGTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DISLVPKTIFVQTEQAVTVFKSA*MMQGQS Trigger: GCTCTGACCCTGCATCATGCACGCACTTTTAAAGAC...TGTAACGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCACTAGAGAGATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACATAAAGCCTTTGATATaGGTACCCTGTCTCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: KREPFWSPLQNIPSKGKHIKPLI*VPCLMA Trigger: GGCCATGAGACAGGGTACCCATATCAAAGGCTTTAT...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCCAACAGAGAACTGCCCCTaGAATATAAAGCCTTTGATA | + |
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Preference number: 2 (lower is better) Translates to: REPFWSPLQNIPSKGKHPTENCP*NIKPLI Trigger: TATCAAAGGCTTTATATTCCAGGGGCAGTTCTCTGT...TGGGTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCCATTTATAGGATGTATATaGGTGTGGGTATGCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: REPFWSPLQNIPSKGKHPFIGCI*VWVCFH Trigger: GTGAAAGCATACCCACACTCATATACATCCTATAAA...TGGGTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR GCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGGAGACAGAGTCTCTCTaGATAGCCTTAGATACACAG | + |
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Preference number: 2 (lower is better) Translates to: AYIYIYLIRLRQEDALSMETESL*IALDTQ Trigger: CTGTGTATCTAAGGCTATGCAGAGAGACTCTGTCTC...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACTTTCCTCATACATTCTaGACCCAAGCAATAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: KREPFWSPLQNIPSKGKHFPHTF*TQAIAT Trigger: AGTTGCTATTGCTTGGGTTCAGAATGTATGAGGAAA...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACTATTTTTGTACAAACTaGACAAGCCGTTACACCCAA | + |
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Preference number: 2 (lower is better) Translates to: KREPFWSPLQNIPSKGKHYFCTN*TSRYTQ Trigger: TTGGGTGTAACGGCTTGTTCAGTTTGTACAAAAATA...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCCATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCATTCCAAACTTTCTGGTaGCTATCCTTCATGCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: TLHFTSSHTSVCVLYCNSFQTFW*LSFMLV Trigger: TACTAGCATGAAGGATAGTCACCAGAAAGTTTGGAA...TGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAATGGAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR GCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGGTAACTAAAGCTGAGTaGTTTAGCATGGAGGATATC | + |
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Preference number: 2 (lower is better) Translates to: AYIYIYLIRLRQEDALSMVTKAE*FSMEDI Trigger: GATATCCTCCATGCTAAAGCACTCAGCTTTAGTTAC...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR CCA 90 bp | GACATCTCTCTAGTGCCAAAGACTATTTTTGTACAAACTGAACAAGCCGTTACAAAATTTCAACAAGTATaGCGAACTGTCTGTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: DISLVPKTIFVQTEQAVTKFQQV*RTVCAS Trigger: ACTTGCACAGACAGTTCGCCATACTTGTTGAAATTT...TGTAACGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCACTAGAGAGATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR TCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGAATGGATCACAAGTaGGACTCTGATATAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: AYIYIYLIRLRQEDALSMRMDHK*DSDIEM Trigger: CATTTCTATATCAGAGTCTCACTTGTGATCCATTCT...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCCATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCATCCTACACTAACATCTaGAAGAAGTGTTTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TLHFTSSHTSVCVLYCNSSYTNI*KKCLKQ Trigger: CTGCTTTAAACACTTCTTTCAGATGTTAGTGTAGGA...TGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAATGGAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR-3UTR CCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGATTCTACTACCTACCTaGTTTATTCTTCACCCACAA | + |
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Preference number: 2 (lower is better) Translates to: AYIYIYLIRLRQEDALSMILLPT*FILHPQ Trigger: TTGTGGGTGAAGAATAAACCAGGTAGGTAGTAGAAT...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
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| 3UTR GCA 72 bp | ACCTCTCAGTCAAAGCTGAGCTCACACTGGAAGAGTTaGTGGCCCACACTCAACACCTGCAGCAGCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: TSQSKLSSHWKS*WPTLNTCSSLE Trigger: CTCCAGGCTGCTGCAGGTGTTGAGTGTGGGCCAGCAACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| 3UTR CCA 72 bp | CTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTaGGCTCTAGAACATGTTAGAGCCAAGCCTGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: LRQEDALSMRPD*ALEHVRAKPGI Trigger: TATCCCAGGCTTGGCTCTAACATGTTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCATGCAGGGTCAGAGCTaGACACAGACCACTCCGATT | + |
|
Preference number: 3 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFMQGQS*TQTTPI Trigger: AATCGGAGTGGTCTGTGTCAAGCTCTGACCCTGCAT...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTGCTGCGCTCTCTCCTTaGGGCAAGAATGGATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: YLIRLRQEDALSMRPDWAAALSP*GKNGSQ Trigger: TTGTGATCCATTCTTGCCCAAAGGAGAGAGCGCAGC...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAAATAACCACCGCTATGTaGTGGGTGCAAAAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: IRLRQEDALSMRPDWALEITTAM*WVQKEI Trigger: GATTTCCTTTTGCACCCACAACATAGCGGTGGTTAT...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR TCA 72 bp | CACAGTATAACTCATTCCTTACCTCTCAGTCAAAGCTaGGCTCACACTGGAAGAGTTGCTGGCCCACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HSITHSLPLSQS*AHTGRVAGPHS Trigger: TGAGTGTGGGCCAGCAACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGGTAAGGAATGAGTTATACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTACTTCTATCTAAATaGAAACTGGGGGACAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLIRLRQEDALSMRPDWALLLSK*KLGDKV Trigger: CACCTTGTCCCCCAGTTTCAATTTAGATAGAAGTAG...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR GCA 72 bp | GTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTaGCTAAGTGCTGGGATCAAAGGCATATACCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSGTCCVDQAGL*LSAGIKGIYHF Trigger: AAAATGGTATATGCCTTTGATCCCAGCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR CCA 72 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTaGCCTCTGCCTAAGTGCTGGGATCAAAGGCATATA | + |
|
Preference number: 3 (lower is better) Translates to: IHSFRNLLCRSG*PLPKCWDQRHI Trigger: TATATGCCTTTGATCCCAGCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAAAGGGTACTTGAAAAGTaGAACTATTCTACTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: IRLRQEDALSMRPDWALERVLEK*NYSTTY Trigger: GTAGGTAGTAGAATAGTTCAACTTTTCAAGTACCCT...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTGAAAAGAAAATGGCCTaGTTTGAGACCTGCAATATT | + |
|
Preference number: 3 (lower is better) Translates to: YLIRLRQEDALSMRPDWAEKKMA*FETCNI Trigger: AATATTGCAGGTCTCAAACAAGGCCATTTTCTTTTC...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR TCA 72 bp | TATGCCAATCCAAGGAAAGGATGGGACTCCCATGAATaGCCTACTCCTGTCTATGCCTATAGGGTGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YANPRKGWDSHE*PTPVYAYRVFE Trigger: TTCAAACACCCTATAGGCATAGACAGGAGTAGGTCATTCATGGGAGTCCCATCCTTTCCTTGGATTGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR TCA 72 bp | CTGCGCTCTCTCCTTTGGGCAAGAATGGATCACAAGTaGGACTCTGATATAGAAATGAAGATGCTTGTATGC | + |
|
Preference number: 3 (lower is better) Translates to: LRSLLWARMDHK*DSDIEMKMLVC Trigger: GCATACAAGCATCTTCATTTCTATATCAGAGTCTCACTTGTGATCCATTCTTGCCCAAAGGAGAGAGCGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR CCA 72 bp | TTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCTaGGATCAAAGGCATATACCATTTTATCTGAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LLCRSGWPLPKC*DQRHIPFYLKY Trigger: ATACTTCAGATAAAATGGTATATGCCTTTGATCCCAGCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR GCA 72 bp | TATATATATATACTTGATAAGACTGAGGCAGGAAGATaGCCTGAGTATGAGGCCAGACTGGGCTCTAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: YIYILDKTEAGR*PEYEARLGSRT Trigger: TGTTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR CCA 72 bp | AGAAGGCATTGCAATATTGCACCAAAATCAGAGATCTaGCAAGCTATGCCAGTGTTAGCTTTCCTCACATAC | + |
|
Preference number: 3 (lower is better) Translates to: RRHCNIAPKSEI*QAMPVLAFLTY Trigger: GTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCTGATTTTGGTGCAATATTGCAATGCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGCACAGTTTCAGGAACTaGCTGTGTAGATCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AYIYIYLIRLRQEDALSMHSFRN*LCRSGW Trigger: CCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTG...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACTCTCATGGCCTCTTCTaGGTCGTTTCCAGCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KREPFWSPLQNIPSKGKHSHGLF*VVSSKR Trigger: TCTTTTGCTGGAAACGACCAAGAAGAGGCCATGAGA...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR TCA 72 bp | ACTACTCACGAGAAAGGGCCATCAAGCGCATCAATTTaGGCGATCCACTTACAGATCATTCTTGTTTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TTHEKGPSSASI*AIHLQIILVYF Trigger: AAAGTAAACAAGAATGATCTGTAAGTGGATCGCTCAAATTGATGCGCTTGATGGCCCTTTCTCGTGAGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR TCA 72 bp | TCTCCTTTGGGCAAGAATGGATCACAAGTGAGACTCTaGTATAGAAATGAAGATGCTTGTATGCAAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPLGKNGSQVRL*YRNEDACMQKG Trigger: GCCTTTTTGCATACAAGCATCTTCATTTCTATATCAGAGTCTCACTTGTGATCCATTCTTGCCCAAAGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR TCA 72 bp | CAATTGTTTGTGCAGATGTTAACCTACACAGGACTATaGAGTTGTAACAAAGCAATTACAGAGAACTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLFVQMLTYTGL*SCNKAITENCP Trigger: GGGGCAGTTCTCTGTAATTGCTTTGTTACAACTTCATAGTCCTGTGTAGGTTAACATCTGCACAAACAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR GCA 72 bp | TATCCAGTGACACTTACTGGGTCTTCTCTTAGACGATaGACAAATCCTACACTAACATCTGAAAGAAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YPVTLTGSSLRR*TNPTLTSERSV Trigger: AACACTTCTTTCAGATGTTAGTGTAGGATTTGTGCATCGTCTAAGAGAAGACCCAGTAAGTGTCACTGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGAACTTATTGCATGAATCTGAGGCCACTGTAAGGAAAAGAAAGATGCTAATTAGACCAATGGCTTaGATAGGAAAACTGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QMNLLHESEATVRKRKMLIRPMA*IGKLVR Trigger: CCTCACCAGTTTTCCTATCAAAGCCATTGGTCTAAT...TAGCATCTTTCTTTTCCTTACAGTGGCCTCAGATTCATGCAATAAGTTCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCAAGCGAGCGTGGTATTACCTAACTaGTCTTTAAAAGTGCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILLLPTQVCVFFTVIQASVVLPN*SLKVRA Trigger: TGCACGCACTTTTAAAGACAAGTTAGGTAATACCAC...GCTCGCTTGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACTGCCAAAGACTATTTTaGTACAAACTGAACAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: KREPFWSPLQNIPSKGKHCQRLF*YKLNKP Trigger: CGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCA...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR TCA 72 bp | TTTACTGAACCAGTATGGACTGACGATAGACTACTCTaGTACCAAATGAGGACTCCAGTTATTTTAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTEPVWTDDRLL*YQMRTPVILTF Trigger: GAAAGTTAAAATAACTGGAGTCCTCATTTGGTATCAGAGTAGTCTATCGTCAGTCCATACTGGTTCAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR GCA 72 bp | GAGTTTTTCCAGAATGACAACCTTGGTCATATACAATaGATACAGACAAAGCAGTTCCAAATGAAACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EFFQNDNLGHIQ*IQTKQFQMKHR Trigger: TCTGTGTTTCATTTGGAACTGCTTTGTCTGTATGCATTGTATATGACCAAGGTTGTCATTCTGGAAAAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGTATCATCAAGAGCTATaGTATGTGACCTTACTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AYIYIYLIRLRQEDALSMYHQEL*YVTLLH Trigger: ATGCAGTAAGGTCACATACAATAGCTCTTGATGATA...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTCAGGGCTTTTACTTAGGAGTGTGGTATTACCTAACTTGTCTTTAAAACTTCAAATGAACTTATaGCATGAATCTGAGGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SFSGLLLRSVVLPNLSLKLQMNL*HESEAT Trigger: AGTGGCCTCAGATTCATGCAATAAGTTCATTTGAAG...TTTTAAAGACAAGTTAGGTAATACCACACTCCTAAGTAAAAGCCCTGAAAAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTCCATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCATCTGGTTTTACAGTTTaGAAAATCAGGCTTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TLHFTSSHTSVCVLYCNSSGFTV*KIRLCS Trigger: TGAGCAAAGCCTGATTTTCAAAACTGTAAAACCAGA...TGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAATGGAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTCAGGGCTTTTACTTAGGAGTGTGGTATTACCTAACTTGTCTTTAAAAGTGTATAAACTGCTTTaGGAAGTAGTTTCAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SFSGLLLRSVVLPNLSLKVYKLL*EVVSRA Trigger: AGCTCTTGAAACTACTTCCAAAAGCAGTTTATACAC...TTTTAAAGACAAGTTAGGTAATACCACACTCCTAAGTAAAAGCCCTGAAAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR TCA 72 bp | TTCTACTTTACAAATACTTTCTACTTCTATCTAAATTaGAACTGGGGGACAAGGTGCTATGTTTTAGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: FYFTNTFYFYLN*NWGTRCYVLVA Trigger: CGCCACTAAAACATAGCACCTTGTCCCCCAGTTTCAATTTAGATAGAAGTAGAAAGTATTTGTAAAGTAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR TCA 72 bp | GTATTCATAATTAGAGTAACACACAAAGCAAAGCAATaGGGACGACACAGGAAAAGCTATCAAGAAATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VFIIRVTHKAKQ*GRHRKSYQEML Trigger: TAGCATTTCTTGATAGCTTTTCCTGTGTCGTCCTCATTGCTTTGCTTTGTGTGTTACTCTAATTATGAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR GCA 72 bp | TATATGATGTCTAAAATTTTTGAGACAGAGTCTCTCTaGATAGCCTTAGATACACAGTTTCAGGAACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YMMSKIFETESL*IALDTQFQELA Trigger: AGCAAGTTCCTGAAACTGTGTATCTAAGGCTATGCAGAGAGACTCTGTCTCAAAAATTTTAGACATCATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR CAA 72 bp | TACCTCTCAGTCAAAGCTGAGCTCACACTGGAAGAGTaGCTGGCCCACACTCAACACCTGCAGCAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLSVKAELTLEE*LAHTQHLQQPG Trigger: TCCAGGCTGCTGCAGGTGTTGAGTGTGGGCCAGCAACTCTTCCAGTGTGAGCTCAGCTTTGACTGAGAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAATGTCGCAGCCAAGACTaGACAGCCTCGTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRLRQEDALSMRPDWALECRSQD*TASYSS Trigger: TGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACA...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCACCAACAGCAAATTCTaGACGGGGTACAGACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFTNSKF*TGYRHV Trigger: GACATGTCTGTACCCCGTTCAGAATTTGCTGTTGGT...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCCACTGGTGTCATGGATaGAGGAACAGAATCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFHWCHG*RNRILP Trigger: TGGAAGGATTCTGTTCCTCCATCCATGACACCAGTG...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCGAGACACTGGTGTCATaGATGGAGGAACAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCETLVS*MEEQNP Trigger: AGGATTCTGTTCCTCCATCCATGACACCAGTGTCTC...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTACAAAAAGTCAGGCCTaGACATTAGTGGCACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLIRLRQEDALSMRPDWATKSQA*TLVARS Trigger: ACTTCGTGCCACTAATGTCCAGGCCTGACTTTTTGT...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAAGTACAGCTCAATTTCTaGAAACCTGCTCAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRLRQEDALSMRPDWALEVQLNF*KPAQMV Trigger: GACCATCTGAGCAGGTTTCCAGAAATTGAGCTGTAC...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCCGGAATACTGTAGTTTaGGGTTTGGCAGAACGAATA | + |
|
Preference number: 4 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFRNTVV*GLAERI Trigger: TATTCGTTCTGCCAAACCCCAAACTACAGTATTCCG...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACGGTTGTACACCTCTGTaGAAGGGCAGCCCTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RDLASYASVSFPHIQTTHGCTPL*KGSPEI Trigger: AATCTCAGGGCTGCCCTTCCACAGAGGTGTACAACC...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTCTAGAAACATACATTGCTGCCTaGAGGATTTCATGTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRLRQEDALSMRPDWALETYIAA*RISCTV Trigger: CACTGTACATGAAATCCTTCAGGCAGCAATGTATGT...TTCTAGAGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCCCACTTATTTTCATCTaGGTCAAAGGTGAGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFPLIFI*VKGENG Trigger: TCCATTCTCACCTTTGACCCAGATGAAAATAAGTGG...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTTCGTTCCCTCATGTCTaGTGTGAACATAATTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLIRLRQEDALSMRPDWASFPHV*CEHNSE Trigger: TTCAGAATTATGTTCACAGCAGACATGAGGGAACGA...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR GCA 90 bp | TACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGGCCAGACTGGGCTAAGCTGAACATACATTaGTGCCTGAAGGATTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YLIRLRQEDALSMRPDWAKLNIH*CLKDFM Trigger: CATGAAATCCTTCAGGCAGCAATGTATGTTCAGCTT...AGCCCAGTCTGGCCTCATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACGAGACACTGGTGTCATaGATGGAGGAACAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLASYASVSFPHIQTTHETLVS*MEEQNP Trigger: AGGATTCTGTTCCTCCATCCATGACACCAGTGTCTC...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACAGTAATCACTCTGGGTaGCCAAGAGAGCTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLASYASVSFPHIQTTHSNHSG*PRELYG Trigger: CCCATAAAGCTCTCTTGGCCACCCAGAGTGATTACT...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR TCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCCAAAACCTGATGTTCTaGATGATGGTATCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCQNLMF*MMVSVC Trigger: ACACACAGATACCATCATTCAGAACATCAGGTTTTG...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR GCA 90 bp | ATACACAGTTTCAGGAACTTGCTGTGTAGATCAGGCTGGCCTCTGCCTAAGTGCCAATTTCTGGAAACCTaGTCAGATGGTCATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHSFRNLLCRSGWPLPKCQFLET*SDGHYP Trigger: TGGATAATGACCATCTGAGCAGGTTTCCAGAAATTG...GCACTTAGGCAGAGGCCAGCCTGATCTACACAGCAAGTTCCTGAAACTGTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCAAGCGAGCTGTCGCAGCCAAGACTaGACAGCCTCGTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPTQVCVFFTVIQASCRSQD*TASYSS Trigger: TGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACA...GCTCGCTTGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCAGTTGGTGACTACTTaGGTTCTCCTGGTCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KREPFWSPLQNIPSKGKHQLVTT*VLLVRC Trigger: GCAGCGGACCAGGAGAACGCAAGTAGTCACCAACTG...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACACAAAAAGTCAGGCCTaGACATTAGTGGCACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDLASYASVSFPHIQTTHTKSQA*TLVARS Trigger: ACTTCGTGCCACTAATGTCCAGGCCTGACTTTTTGT...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACCCTTCTCAAAGACGCTaGATGGAGTCATCAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDLASYASVSFPHIQTTHPSQRR*MESSDK Trigger: TTTGTCTGATGACTCCATCCAGCGTCTTTGAGAAGG...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR CAA 72 bp | GTCTTTAAAAGTGCGTGCATGATGCAGGGTCAGAGCTaGACACAGACCACTCCGATTCTTATTAAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFKSACMMQGQS*TQTTPILIKTG Trigger: CCCTGTTTTAATAAGAATCGGAGTGGTCTGTGTCAAGCTCTGACCCTGCATCATGCACGCACTTTTAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGACCCAGCAGAGACACTaGTGTCATGGATGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AYIYIYLIRLRQEDALSMTQQRH*CHGWRN Trigger: GTTCCTCCATCCATGACACCAGTGTCTCTGCTGGGT...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR CAA 72 bp | CCCTGCCAGATGTGGCATGCATATATATATATATACTaGATAAGACTGAGGCAGGAAGATGCCCTGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PCQMWHAYIYIY*IRLRQEDALSM Trigger: CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGCATGCCACATCTGGCAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACGTTCTCCTGGTCCGCTaGTCTATAGTCCCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KREPFWSPLQNIPSKGKHVLLVR*SIVPSL Trigger: TAAAGAAGGGACTATAGAGCAGCGGACCAGGAGAAC...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCCATCGTTCCCTCATGTCTaGTGTGAACATAATTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: REPFWSPLQNIPSKGKHPSFPHV*CEHNSE Trigger: TTCAGAATTATGTTCACAGCAGACATGAGGGAACGA...TGGGTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACATCTCTTGTTCTGCCTaGTACAGCATAAATAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RDLASYASVSFPHIQTTHISCSA*YSINKL Trigger: AAGTTTATTTATGCTGTAGCAGGCAGAACAAGAGAT...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCCGGAAAATGTAGGTTaGACACCTGTAAACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KREPFWSPLQNIPSKGKHPENVG*TPVNHP Trigger: TGGATGGTTTACAGGTGTGCAACCTACATTTTCCGG...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGCACTGGTGTCATGGATaGAGGAACAGAATCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AYIYIYLIRLRQEDALSMHWCHG*RNRILP Trigger: TGGAAGGATTCTGTTCCTCCATCCATGACACCAGTG...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGAGTAATCACTCTGGGTaGCCAAGAGAGCTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYIYIYLIRLRQEDALSMSNHSG*PRELYG Trigger: CCCATAAAGCTCTCTTGGCCACCCAGAGTGATTACT...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | GACATCTCTCTAGTGCCAAAGACTATTTTTGTACAAACTGAACAAGCCGTTACAGTACAGCTCAATTTCTaGAAACCTGCTCAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DISLVPKTIFVQTEQAVTVQLNF*KPAQMV Trigger: GACCATCTGAGCAGGTTTCCAGAAATTGAGCTGTAC...TGTAACGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCACTAGAGAGATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTCAGGGCTTTTACTTAGGAGTGTGGTATTACCTAACTTGTCTTTAAAAACTTTCGAAGAGGCATaGAATTCACCATCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSGLLLRSVVLPNLSLKTFEEA*NSPSGP Trigger: GGGCCCTGATGGTGAATTCCATGCCTCTTCGAAAGT...TTTTAAAGACAAGTTAGGTAATACCACACTCCTAAGTAAAAGCCCTGAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCAAGCGAGCACATACATTGCTGCCTaGAGGATTTCATGTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPTQVCVFFTVIQASTYIAA*RISCTV Trigger: CACTGTACATGAAATCCTTCAGGCAGCAATGTATGT...GCTCGCTTGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGAACTTATTGCATGAATCTGAGGCCACTGTAAGGAAAAGAAAGATGCTAAGAACGAATACGGCTTaGTTTCATGTCCAACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMNLLHESEATVRKRKMLRTNTA*FHVQQG Trigger: CCCTTGTTGGACATGAAATCAAGCCGTATTCGTTCT...TAGCATCTTTCTTTTCCTTACAGTGGCCTCAGATTCATGCAATAAGTTCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGCTCAAAGACGCTGGATaGAGTCATCAGACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: AYIYIYLIRLRQEDALSMLKDAG*SHQTKP Trigger: AGGTTTTGTCTGATGACTCCATCCAGCGTCTTTGAG...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS-3UTR CCA 90 bp | CAAATGAACTTATTGCATGAATCTGAGGCCACTGTAAGGAAAAGAAAGATGCTACTCAAAGACGCTGGATaGAGTCATCAGACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QMNLLHESEATVRKRKMLLKDAG*SHQTKP Trigger: AGGTTTTGTCTGATGACTCCATCCAGCGTCTTTGAG...TAGCATCTTTCTTTTCCTTACAGTGGCCTCAGATTCATGCAATAAGTTCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | GCATATATATATATATACTTGATAAGACTGAGGCAGGAAGATGCCCTGAGTATGCCTTCTCAAAGACGCTaGATGGAGTCATCAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: AYIYIYLIRLRQEDALSMPSQRR*MESSDK Trigger: TTTGTCTGATGACTCCATCCAGCGTCTTTGAGAAGG...CATACTCAGGGCATCTTCCTGCCTCAGTCTTATCAAGTATATATATATATATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| 3UTR CAA 72 bp | ACTTCCCAGGTAAGTGGAGCAGTGTATAAACTGCTTTaGGAAGTAGTTTCAAGAGCTAGTGCTTCAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSQVSGAVYKLL*EVVSRASASNE Trigger: TTCATTTGAAGCACTAGCTCTTGAAACTACTTCCAAAAGCAGTTTATACACTGCTCCACTTACCTGGGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR CAA 72 bp | TTATACAATAGCAGCCATATAGAAGGCATTGCAATATaGCACCAAAATCAGAGATCTGGCAAGCTATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYNSSHIEGIAI*HQNQRSGKLCQ Trigger: CTGGCATAGCTTGCCAGATCTCTGATTTTGGTGCAATATTGCAATGCCTTCTATATGGCTGCTATTGTATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACAAGCTGAACATACATTaGTGCCTGAAGGATTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KREPFWSPLQNIPSKGKHKLNIH*CLKDFM Trigger: CATGAAATCCTTCAGGCAGCAATGTATGTTCAGCTT...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCCATTGGAAGTAATTCAATaGTTGGTCAACTTCATATCG | + |
|
Preference number: 4 (lower is better) Translates to: REPFWSPLQNIPSKGKHPLEVIQ*LVNFIS Trigger: CGATATGAAGTTGACCAAGCATTGAATTACTTCCAA...TGGGTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR CAA 72 bp | TCTAACCACTTACTGAGTTTTTCCAGAATGACAACCTaGGTCATATACAATGCATACAGACAAAGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNHLLSFSRMTT*VIYNAYRQSSS Trigger: GGAACTGCTTTGTCTGTATGCATTGTATATGACCAAGGTTGTCATTCTGGAAAAACTCAGTAAGTGGTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTCCATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCACAAAACCTGATGTTCTaGATGATGGTATCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLHFTSSHTSVCVLYCNSQNLMF*MMVSVC Trigger: ACACACAGATACCATCATTCAGAACATCAGGTTTTG...TGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAATGGAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CCA 90 bp | CAAATGAACTTATTGCATGAATCTGAGGCCACTGTAAGGAAAAGAAAGATGCTATCTTGTGAAAACATCTaGCATAATTCATCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QMNLLHESEATVRKRKMLSCENI*HNSSCS Trigger: AGAGCAAGATGAATTATGCCAGATGTTTTCACAAGA...TAGCATCTTTCTTTTCCTTACAGTGGCCTCAGATTCATGCAATAAGTTCATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| 3UTR CAA 72 bp | TCACATCATAATCCAACCTTAAGGGTACTTGAAAAGTaGAACTATTCTACTACCTACCTGGTTTATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHHNPTLRVLEK*NYSTTYLVYSS Trigger: TGAAGAATAAACCAGGTAGGTAGTAGAATAGTTCAACTTTTCAAGTACCCTTAAGGTTGGATTATGATGTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS GCA 90 bp | GTATCTGTGTGTCTCCACCGTCGTCTATCATGTCGCAGCCAAGACTaGACAGCCTCGTACAGCTCAATTTCTGGAAACCTGCTCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VSVCLHRRLSCRSQD*TASYSSISGNLLRW Trigger: CCATCTGAGCAGGTTTCCAGAAATTGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACATGATAGACGACGGTGGAGACACACAGATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS GCA 90 bp | TTATTCTCCCAGCAGTTGGTGACTACTTGCGTTCTCCTGGTCCGCTaGTCTATAGTCCCTTCTTTACTGGGGTCAAACACACACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFSQQLVTTCVLLVR*SIVPSLLGSNTHTC Trigger: ACAGGTGTGTGTGTTTGACCCCAGTAAAGAAGGGACTATAGAGCAGCGGACCAGGAGAACGCAAGTAGTCACCAACTGCTGGGAGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS-3UTR CAA 90 bp | ACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCAGGGCCTGCTGGTGAACATTTaGGAAGTAATTCAATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPAAAWRETMGAALPFQGLLVNI*EVIQCL Trigger: CAAGCATTGAATTACTTCCAAAATGTTCACCAGCAG...GCCCTGAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAACACCTGCAGCAGCCTGGAGAGAAACAATGGGAGCCGCACTTCCTTTTCGAAGTAATTCAATGCTaGGTCAACTTCATATCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQHLQQPGEKQWEPHFLFEVIQC*VNFISE Trigger: CTCCGATATGAAGTTGACCAAGCATTGAATTACTTC...GAAAAGGAAGTGCGGCTCCCATTGTTTCTCTCCAGGCTGCTGCAGGTGTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS TCA 90 bp | TTCTCAAAGACGCTGGATGGAGTCATCAGACAAAACCTGATGTTCTaGATGATGGTATCTGTGTGTCTCCACCGTCGTCTATCATGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSKTLDGVIRQNLMF*MMVSVCLHRRLSCR Trigger: GCGACATGATAGACGACGGTGGAGACACACAGATACCATCATTCAGAACATCAGGTTTTGTCTGATGACTCCATCCAGCGTCTTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS TCA 90 bp | ACATGTCTGCCATACGCAGCCAAGAATTTTGTCTTGGATCATACCTaGACACTTTCGAAGAGGCATGGAATTCACCATCAGGGCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLPYAAKNFVLDHT*TLSKRHGIHHQGPV Trigger: AACTGGGCCCTGATGGTGAATTCCATGCCTCTTCGAAAGTGTTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGTATGGCAGACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS CCA 90 bp | ACGGGGTACAGACATGTCTGCCATACGCAGCCAAGAATTTTGTCTTaGATCATACCTGAACACTTTCGAAGAGGCATGGAATTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: TGYRHVCHTQPRILS*IIPEHFRRGMEFTI Trigger: GATGGTGAATTCCATGCCTCTTCGAAAGTGTTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGTATGGCAGACATGTCTGTACCCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCAAGCGAGCGCAGTTGGTGACTACTaGCGTTCTCCTGGTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPTQVCVFFTVIQASAVGDY*RSPGPL Trigger: CAGCGGACCAGGAGAACGCAAGTAGTCACCAACTGC...GCTCGCTTGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS-3UTR CAA 90 bp | AGAGATCTGGCAAGCTATGCCAGTGTTAGCTTTCCTCACATACAGACTACTCACTTATTCTCCCAGCAGTaGGTGACTACTTGCGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RDLASYASVSFPHIQTTHLFSQQ*VTTCVL Trigger: GAGAACGCAAGTAGTCACCAACTGCTGGGAGAATAA...GTGAGTAGTCTGTATGTGAGGAAAGCTAACACTGGCATAGCTTGCCAGATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
||
| CDS TCA 90 bp | TCCTCGGAATACTGTAGTTTGGGGTTTGGCAGAACGAATACGGCTTaGTTTCATGTCCAACAAGGGCTGCTGGTGAACATTTTGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSEYCSLGFGRTNTA*FHVQQGLLVNILEV Trigger: TACTTCCAAAATGTTCACCAGCAGCCCTTGTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGTATTCCGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS CCA 90 bp | ATCATGTCGCAGCCAAGACTGCACAGCCTCGTACAGCTCAATTTCTaGAAACCTGCTCAGATGGTCATTATCCAAATAAGACATGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IMSQPRLHSLVQLNF*KPAQMVIIQIRHEL Trigger: AAGCTCATGTCTTATTTGGATAATGACCATCTGAGCAGGTTTCCAGAAATTGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS TCA 90 bp | CAATTTCTGGAAACCTGCTCAGATGGTCATTATCCAAATAAGACATaGGCTTCTCGAAGCTCAGATAAGACAAAAAGTCAGGCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QFLETCSDGHYPNKT*ASRSSDKTKSQAWT Trigger: TGTCCAGGCCTGACTTTTTGTCTTATCTGAGCTTCGAGAAGCTCATGTCTTATTTGGATAATGACCATCTGAGCAGGTTTCCAGAAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS CCA 90 bp | CTGTCTATCGCTTTCAAATGTACCAACCTTCTCAAAGACGCTGGATaGAGTCATCAGACAAAACCTGATGTTCTGAATGATGGTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSIAFKCTNLLKDAG*SHQTKPDVLNDGIC Trigger: ACAGATACCATCATTCAGAACATCAGGTTTTGTCTGATGACTCCATCCAGCGTCTTTGAGAAGGTTGGTACATTTGAAAGCGATAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096369.10 |
||
| CDS CCA 90 bp | CTATTAACCATGCTATGTCCAATCATTCCTCGGAATACTGTAGTTTaGGGTTTGGCAGAACGAATACGGCTTGATTTCATGTCCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTMLCPIIPRNTVV*GLAERIRLDFMSNK Trigger: CTTGTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGTATTCCGAGGAATGATTGGACATAGCATGGTTAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCAAGCGAGCACTGTAGTTTGGGGTTaGGCAGAACGAATACGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILLLPTQVCVFFTVIQASTVVWG*AERIRL Trigger: AAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGT...GCTCGCTTGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS-3UTR CAA 90 bp | AGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACCCAAGAAAGTTTCATCTCTaGTTCTGCCTGCTACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: REPFWSPLQNIPSKGKHPRKFHL*FCLLQH Trigger: ATGCTGTAGCAGGCAGAACAAGAGATGAAACTTTCT...TGGGTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS-3UTR CAA 90 bp | TCCTTTTCAGGGCTTTTACTTAGGAGTGTGGTATTACCTAACTTGTCTTTAAAAGACCACTTCTACCAATaGGCATGGAGGCCAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: SFSGLLLRSVVLPNLSLKDHFYQ*AWRPRW Trigger: CCATCTTGGCCTCCATGCCAATTGGTAGAAGTGGTC...TTTTAAAGACAAGTTAGGTAATACCACACTCCTAAGTAAAAGCCCTGAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS-3UTR CAA 90 bp | GACATCTCTCTAGTGCCAAAGACTATTTTTGTACAAACTGAACAAGCCGTTACAAGGACCATTATCTGTTaGTCCAGCACAGTCACACCA | + |
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Preference number: 5 (lower is better) Translates to: DISLVPKTIFVQTEQAVTRTIIC*SSTVTP Trigger: TGGTGTGACTGTGCTGGACAAACAGATAATGGTCCT...TGTAACGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCACTAGAGAGATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAGAACCTTTCTGGTCACCTCTTCAGAACATTCCTTCAAAAGGTAAACACTCCGGAAAATGTAGGTaGCACACCTGTAAACCATCC | + |
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Preference number: 5 (lower is better) Translates to: KREPFWSPLQNIPSKGKHSGKCR*HTCKPS Trigger: GGATGGTTTACAGGTGTGCAACCTACATTTTCCGGA...GTGTTTACCTTTTGAAGGAATGTTCTGAAGAGGTGACCAGAAAGGTTCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS TCA 90 bp | TGCTACAGCATAAATAAACTTTCCAATAACACCAACAGCAAATTCTaGACGGGGTACAGACATGTCTGCCATACGCAGCCAAGAATTTTG | + |
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Preference number: 5 (lower is better) Translates to: CYSINKLSNNTNSKF*TGYRHVCHTQPRIL Trigger: CAAAATTCTTGGCTGCGTATGGCAGACATGTCTGTACCCCGTTCAGAATTTGCTGTTGGTGTTATTGGAAAGTTTATTTATGCTGTAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS-3UTR CAA 90 bp | ATTTTACTTCTTCCCACACAAGTGTGTGTGTTCTTTACTGTAATTCAAGCGAGCTCGGAATACTGTAGTTaGGGGTTTGGCAGAACGAAT | + |
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Preference number: 5 (lower is better) Translates to: ILLLPTQVCVFFTVIQASSEYCS*GFGRTN Trigger: ATTCGTTCTGCCAAACCCCAAACTACAGTATTCCGA...GCTCGCTTGAATTACAGTAAAGAACACACACACTTGTGTGGGAAGAAGTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS-3UTR CAA 90 bp | GACATCTCTCTAGTGCCAAAGACTATTTTTGTACAAACTGAACAAGCCGTTACACCAGTGATAAACAACTaGTTATTGAGCACTGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: DISLVPKTIFVQTEQAVTPVINN*LLSTVP Trigger: GGGGACAGTGCTCAATAACAAGTTGTTTATCACTGG...TGTAACGGCTTGTTCAGTTTGTACAAAAATAGTCTTTGGCACTAGAGAGATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS TCA 90 bp | TTCTTTACTGGGGTCAAACACACACACCTGTTTAGATGTGGAAGATaGAGTAATTCCTCCAGTGATAAACAACTTGTTATTGAGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: FFTGVKHTHLFRCGR*SNSSSDKQLVIEHC Trigger: ACAGTGCTCAATAACAAGTTGTTTATCACTGGAGGAATTACTTCATCTTCCACATCTAAACAGGTGTGTGTGTTTGACCCCAGTAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTTCAGGGCTTTTACTTAGGAGTGTGGTATTACCTAACTTGTCTTTAAAAACGCAGCCAAGAATTTaGTCTTGGATCATACCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SFSGLLLRSVVLPNLSLKTQPRI*SWIIPE Trigger: TTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGT...TTTTAAAGACAAGTTAGGTAATACCACACTCCTAAGTAAAAGCCCTGAAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS-3UTR CAA 90 bp | TCCTTTTCAGGGCTTTTACTTAGGAGTGTGGTATTACCTAACTTGTCTTTAAAAATAAACAACTTGTTATaGAGCACTGTCCCCTCATGT | + |
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Preference number: 5 (lower is better) Translates to: SFSGLLLRSVVLPNLSLKINNLL*STVPSC Trigger: ACATGAGGGGACAGTGCTCAATAACAAGTTGTTTAT...TTTTAAAGACAAGTTAGGTAATACCACACTCCTAAGTAAAAGCCCTGAAAAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113915.2 |
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| CDS CCA 72 bp | TACAGTGCTCTGAACCCAGCAGAGACACTGGTGTCATaGATGGAGGAACAGAATCCTTCCACGTCCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: YSALNPAETLVS*MEEQNPSTSPA Trigger: GGCAGGGGACGTGGAAGGATTCTGTTCCTCCATCCATGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000153900.8 ENSMUST00000170594.8 |
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| CDS GCA 72 bp | TGTCTCCACCGTCGTCTATCATGTCGCAGCCAAGACTaGACAGCCTCGTACAGCTCAATTTCTGGAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: CLHRRLSCRSQD*TASYSSISGNL Trigger: CAGGTTTCCAGAAATTGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGACATGATAGACGACGGTGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS GCA 72 bp | CAGCAGTTGGTGACTACTTGCGTTCTCCTGGTCCGCTaGTCTATAGTCCCTTCTTTACTGGGGTCAAACACA | + |
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Preference number: 6 (lower is better) Translates to: QQLVTTCVLLVR*SIVPSLLGSNT Trigger: TGTGTTTGACCCCAGTAAAGAAGGGACTATAGAGCAGCGGACCAGGAGAACGCAAGTAGTCACCAACTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CAA 72 bp | GACAAAAAGTCAGGCCTGGACATTAGTGGCACGAAGTaGTCTAGCAGGAAGGCATCCAGCTTCTCCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: DKKSGLDISGTK*SSRKASSFSLT Trigger: AGTCAGGGAGAAGCTGGATGCCTTCCTGCTAGACAACTTCGTGCCACTAATGTCCAGGCCTGACTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CAA 72 bp | CATCTTGCTCTTATTCTCCCAGCAGTTGGTGACTACTaGCGTTCTCCTGGTCCGCTGCTCTATAGTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HLALILPAVGDY*RSPGPLLYSPF Trigger: GAAGGGACTATAGAGCAGCGGACCAGGAGAACGCAAGTAGTCACCAACTGCTGGGAGAATAAGAGCAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS GCA 72 bp | ATCTTGCTCTTATTCTCCCAGCAGTTGGTGACTACTTaGGTTCTCCTGGTCCGCTGCTCTATAGTCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILLLFSQQLVTT*VLLVRCSIVPS Trigger: AGAAGGGACTATAGAGCAGCGGACCAGGAGAACGCAAGTAGTCACCAACTGCTGGGAGAATAAGAGCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CAA 90 bp | GGCATAATTCATCTTGCTCTTATTCTCCCAGCAGTTGGTGACTACTaGCGTTCTCCTGGTCCGCTGCTCTATAGTCCCTTCTTTACTGGG | + |
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Preference number: 6 (lower is better) Translates to: GIIHLALILPAVGDY*RSPGPLLYSPFFTG Trigger: CCCAGTAAAGAAGGGACTATAGAGCAGCGGACCAGGAGAACGCAAGTAGTCACCAACTGCTGGGAGAATAAGAGCAAGATGAATTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CCA 72 bp | GCTTCTCGAAGCTCAGATAAGACAAAAAGTCAGGCCTaGACATTAGTGGCACGAAGTTGTCTAGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ASRSSDKTKSQA*TLVARSCLAGR Trigger: CCTTCCTGCTAGACAACTTCGTGCCACTAATGTCCAGGCCTGACTTTTTGTCTTATCTGAGCTTCGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CCA 72 bp | TGTCTTGGATCATACCTGAACACTTTCGAAGAGGCATaGAATTCACCATCAGGGCCCAGTTCTTCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: CLGSYLNTFEEA*NSPSGPSSSPP Trigger: AGGTGGAGAAGAACTGGGCCCTGATGGTGAATTCCATGCCTCTTCGAAAGTGTTCAGGTATGATCCAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CAA 90 bp | ACCATGCTATGTCCAATCATTCCTCGGAATACTGTAGTTTGGGGTTaGGCAGAACGAATACGGCTTGATTTCATGTCCAACAAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TMLCPIIPRNTVVWG*AERIRLDFMSNKGC Trigger: GCAGCCCTTGTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGTATTCCGAGGAATGATTGGACATAGCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS TCA 72 bp | ACGCTGGATGGAGTCATCAGACAAAACCTGATGTTCTaGATGATGGTATCTGTGTGTCTCCACCGTCGTCTA | + |
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Preference number: 6 (lower is better) Translates to: TLDGVIRQNLMF*MMVSVCLHRRL Trigger: TAGACGACGGTGGAGACACACAGATACCATCATTCAGAACATCAGGTTTTGTCTGATGACTCCATCCAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS TCA 72 bp | TACTGTAGTTTGGGGTTTGGCAGAACGAATACGGCTTaGTTTCATGTCCAACAAGGGCTGCTGGTGAACATT | + |
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Preference number: 6 (lower is better) Translates to: YCSLGFGRTNTA*FHVQQGLLVNI Trigger: AATGTTCACCAGCAGCCCTTGTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CCA 72 bp | CAGCCAAGACTGCACAGCCTCGTACAGCTCAATTTCTaGAAACCTGCTCAGATGGTCATTATCCAAATAAGA | + |
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Preference number: 6 (lower is better) Translates to: QPRLHSLVQLNF*KPAQMVIIQIR Trigger: TCTTATTTGGATAATGACCATCTGAGCAGGTTTCCAGAAATTGAGCTGTACGAGGCTGTGCAGTCTTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS TCA 72 bp | CCATACGCAGCCAAGAATTTTGTCTTGGATCATACCTaGACACTTTCGAAGAGGCATGGAATTCACCATCAG | + |
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Preference number: 6 (lower is better) Translates to: PYAAKNFVLDHT*TLSKRHGIHHQ Trigger: CTGATGGTGAATTCCATGCCTCTTCGAAAGTGTTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CCA 72 bp | AGACATGTCTGCCATACGCAGCCAAGAATTTTGTCTTaGATCATACCTGAACACTTTCGAAGAGGCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: RHVCHTQPRILS*IIPEHFRRGME Trigger: TTCCATGCCTCTTCGAAAGTGTTCAGGTATGATCCAAGACAAAATTCTTGGCTGCGTATGGCAGACATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CAA 72 bp | TGTCCAATCATTCCTCGGAATACTGTAGTTTGGGGTTaGGCAGAACGAATACGGCTTGATTTCATGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: CPIIPRNTVVWG*AERIRLDFMSN Trigger: GTTGGACATGAAATCAAGCCGTATTCGTTCTGCCAAACCCCAAACTACAGTATTCCGAGGAATGATTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS TCA 72 bp | ATAAATAAACTTTCCAATAACACCAACAGCAAATTCTaGACGGGGTACAGACATGTCTGCCATACGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: INKLSNNTNSKF*TGYRHVCHTQP Trigger: TGGCTGCGTATGGCAGACATGTCTGTACCCCGTTCAGAATTTGCTGTTGGTGTTATTGGAAAGTTTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS GCA 72 bp | CAAATGAATTTTGTCCTGATCTCGTTCCCTCATGTCTaGTGTGAACATAATTCTGAAGTAATCACTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QMNFVLISFPHV*CEHNSEVITLG Trigger: ACCCAGAGTGATTACTTCAGAATTATGTTCACAGCAGACATGAGGGAACGAGATCAGGACAAAATTCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000096369.10 ENSMUST00000113908.8 ENSMUST00000113911.9 ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000153900.8 ENSMUST00000170594.8 |
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| CDS TCA 72 bp | GGGGTCAAACACACACACCTGTTTAGATGTGGAAGATaGAGTAATTCCTCCAGTGATAAACAACTTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: GVKHTHLFRCGR*SNSSSDKQLVI Trigger: AATAACAAGTTGTTTATCACTGGAGGAATTACTTCATCTTCCACATCTAAACAGGTGTGTGTGTTTGACCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CAA 72 bp | GATGAAGTAATTCCTCCAGTGATAAACAACTTGTTATaGAGCACTGTCCCCTCATGTCCATATTTGTTAACT | + |
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Preference number: 6 (lower is better) Translates to: DEVIPPVINNLL*STVPSCPYLLT Trigger: AGTTAACAAATATGGACATGAGGGGACAGTGCTCAATAACAAGTTGTTTATCACTGGAGGAATTACTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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| CDS CCA 72 bp | ATTGAGCACTGTCCCCTCATGTCCATATTTGTTAACTaGATAAGGATCTACAAATTCCCATTTATCATTAGT | + |
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Preference number: 6 (lower is better) Translates to: IEHCPLMSIFVN*IRIYKFPFIIS Trigger: ACTAATGATAAATGGGAATTTGTAGATCCTTATCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113915.2 ENSMUST00000113916.10 ENSMUST00000170594.8 |
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