Pregenerated sensors for KLHL13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036782Ensembl transcript IDs: ENSMUST00000035973.5, ENSMUST00000115313.8, ENSMUST00000115316.9, ENSMUST00000115317.9, ENSMUST00000115319.9
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGTTGGTGAATTTCAGTTATTTCTCCTGTGTGTCTTAGAAACTTaGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: SVGEFQLFLLCVLET*CVLNAPTQSGGLTD Trigger: ATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACACACAGGAGAAATAACTGAAATTCACCAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCCTATTGGAGCAGGCTaGCTCCCTTTGACATCTTAC | + |
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Preference number: 2 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTPIGAG*LPLTSY Trigger: GTAAGATGTCAAAGGGAGGCAGCCTGCTCCAATAGG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGAGGGAGGTAGCTCATaGGAGTTGGCAACCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTEGGSS*ELATFC Trigger: ACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACGTAGCTCATGCGAGTTaGCAACCTTTTGTGTACTGT | + |
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Preference number: 2 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDVAHAS*QPFVYC Trigger: ACAGTACACAAAAGGTTGCCAACTCGCATGAGCTAC...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTGAGGGAGGTAGCTCATaGGAGTTGGCAACCTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCEGGSS*ELATFC Trigger: ACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTC...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCAAAACTTCTTCACTTTaGAACCTAGTGAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIKTSSL*NLVSTV Trigger: AACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTTTT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAAAACTTCTTCACTTTaGAACCTAGTGAGCACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDKTSSL*NLVSTV Trigger: AACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTTTT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTCACAGTCAGGTGGGTTaGCAGATGTGTCAAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCHSQVG*QMCQKY Trigger: GTATTTTTGACACATCTGTCAACCCACCTGACTGTG...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCAAACATCAGCTTCTATaGGATATATTTCAAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIKHQLL*DIFQGW Trigger: CCATCCTTGAAATATATCCCATAGAAGCTGATGTTT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTAAAACTTCTTCACTTTaGAACCTAGTGAGCACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTKTSSL*NLVSTV Trigger: AACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTTTT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTAAACATCAGCTTCTATaGGATATATTTCAAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCKHQLL*DIFQGW Trigger: CCATCCTTGAAATATATCCCATAGAAGCTGATGTTT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAAAACATCAGCTTCTATaGGATATATTTCAAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: DVSKILYEKREVAHASWQKHQLL*DIFQGW Trigger: CCATCCTTGAAATATATCCCATAGAAGCTGATGTTT...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACAAACATCAGCTTCTATaGGATATATTTCAAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHKHQLL*DIFQGW Trigger: CCATCCTTGAAATATATCCCATAGAAGCTGATGTTT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGGTAGCTCATGCGAGTaGGCAACCTTTTGTGTACTG | + |
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Preference number: 3 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTGSSCE*ATFCVL Trigger: CAGTACACAAAAGGTTGCCAACTCGCATGAGCTACC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CAA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTGAAAACTTCTTCACTTaGAAACCTAGTGAGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPENFFT*KPSEHS Trigger: ACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTTTTC...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR TCA 72 bp | GGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTaGCAGATGTGTCAAAAATACTTTATGAAAAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GVFSMHPHSQVG*QMCQKYFMKRG Trigger: CCCTCTTTTCATAAAGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CAA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTCGAGTTGGCAACCTTTaGTGTACTGTTTCCTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCRVGNL*CTVSYW Trigger: CCAATAGGAAACAGTACACAAAAGGTTGCCAACTCG...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGAAAACTTCTTCACTTaGAAACCTAGTGAGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTENFFT*KPSEHS Trigger: ACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTTTTC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| 3UTR-3UTR CAA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAGAAAACTTCTTCACTTaGAAACCTAGTGAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: DVSKILYEKREVAHASWQENFFT*KPSEHS Trigger: ACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTTTTC...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTGTAGGCCTCGGACAGTaGTCATCGGTGCCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPVGLGQ*SSVPSG Trigger: CCCAGAAGGCACCGATGACCACTGTCCGAGGCCTAC...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCGTAGGCCTCGGACAGTaGTCATCGGTGCCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIVGLGQ*SSVPSG Trigger: CCCAGAAGGCACCGATGACCACTGTCCGAGGCCTAC...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACGTAGGCCTCGGACAGTaGTCATCGGTGCCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDVGLGQ*SSVPSG Trigger: CCCAGAAGGCACCGATGACCACTGTCCGAGGCCTAC...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTAGGGAGTTCTCCAGCTaGATTTCGTCCACCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPREFSS*ISSTNC Trigger: GCAGTTGGTGGACGAAATGCAGCTGGAGAACTCCCT...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCAGGGAGTTCTCCAGCTaGATTTCGTCCACCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIREFSS*ISSTNC Trigger: GCAGTTGGTGGACGAAATGCAGCTGGAGAACTCCCT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTGACAGTGGTCATCGGTaGCTTCTGGGTCCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPDSGHR*LLGPFV Trigger: GACAAATGGACCCAGAAGGCACCGATGACCACTGTC...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCTGGTGTCAGACCGAATaGCAGTCCTGTCTGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIWCQTE*QSCLTA Trigger: TGCAGTCAGACAGGACTGCCATTCGGTCTGACACCA...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGTAGGCCTCGGACAGTaGTCATCGGTGCCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTVGLGQ*SSVPSG Trigger: CCCAGAAGGCACCGATGACCACTGTCCGAGGCCTAC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCATGACAGCAATGCCATaGTGGTATCTTGGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIMTAMP*WYLGAS Trigger: GGATGCCCCAAGATACCAGCATGGCATTGCTGTCAT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCCATCAAGCCGAAGCTaGTCAAAGCCCTGTAACACC | + |
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Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDPSSRS*SKPCNT Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGGCTTGATGG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTGAATCTGAAGAAAGCTaGCGGCTTCCAGCGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPESEES*RLPAYP Trigger: AGGATACGCTGGAAGCCGCCAGCTTTCTTCAGATTC...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACTGGTGTCAGACCGAATaGCAGTCCTGTCTGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDWCQTE*QSCLTA Trigger: TGCAGTCAGACAGGACTGCCATTCGGTCTGACACCA...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTACAGCAATGCCATGCTaGTATCTTGGGGCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPTAMPC*YLGASM Trigger: CATGGATGCCCCAAGATACCAGCATGGCATTGCTGT...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR TCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCTGGTCAAGGATAGGTaGGTAGTATTCACAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPLVKDR*VVFTAQ Trigger: CTGAGCTGTGAATACTACTCACCTATCCTTGACCAG...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCCACAAGTGATCGGTTaGGGAGTATTGCAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDPQVIG*GVLQQP Trigger: TGGTTGCTGCAATACTCCGCAACCGATCACTTGTGG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
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| CDS-3UTR GCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCGATGCGTGTACTTCCTaGCTTGCAAGACTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIDACTS*LARLQM Trigger: CATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATC...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTGATGCGTGTACTTCCTaGCTTGCAAGACTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPDACTS*LARLQM Trigger: CATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATC...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCGTAGTCACTAGCAGATaGCATCATGACTCTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIVVTSR*HHDSVH Trigger: GTGCACAGAGTCATGATGGCATCTGCTAGTGACTAC...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR GCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTTCAGGAACTCCCCAGTaGTCAGCAATGCAGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPSGTPQ*SAMQQN Trigger: ATTTTGCTGCATTGCTGAGCACTGGGGAGTTCCTGA...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCTCTGCCCTCTTAACATaGAAGCAATTGGGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDISALLT*KQLGST Trigger: AGTGGACCCCAATTGCTTCCATGTTAAGAGGGCAGA...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACTGCGCAATTCTTTACTaGCGACAAGCTGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDCAILY*RQAAVS Trigger: TGAGACAGCAGCTTGTCGTCAGTAAAGAATTGCGCA...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCAGAGAAAATTTCCGATaGCAGCAATGCCATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIRENFR*QQCHAG Trigger: ACCAGCATGGCATTGCTGTCATCGGAAATTTTCTCT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCCATACAGAAATCCTTTaGGGGCACTTAGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIHTEIL*GHLGGR Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATG...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCATACAGAAATCCTTTaGGGGCACTTAGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPHTEIL*GHLGGR Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATG...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCTGGTCAAGGATAGGTaGGTAGTATTCACAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDLVKDR*VVFTAQ Trigger: CTGAGCTGTGAATACTACTCACCTATCCTTGACCAG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDRHSFK*WSSSST Trigger: TGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTCCTGCCTTGCAAGACTaGAAATGGGAAGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCPALQD*KWEERP Trigger: GGGCCTCTCTTCCCATTTGCAGTCTTGCAAGGCAGG...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACGTAGTCACTAGCAGATaGCATCATGACTCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDVVTSR*HHDSVH Trigger: GTGCACAGAGTCATGATGGCATCTGCTAGTGACTAC...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIHSFKC*SSSSTS Trigger: ACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTG...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCTTGCAAGACTGCAAATaGGAAGAGAGGCCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDILQDCK*EERPIS Trigger: TGAAATGGGCCTCTCTTCCCATTTGCAGTCTTGCAA...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTATTAATGAGCTCCTGTaGTGTCATCAGCGGAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPINELL*CHQRKS Trigger: CGATTTCCGCTGATGACACCACAGGAGCTCATTAAT...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCATACAGAAATCCTTTaGGGGCACTTAGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDHTEIL*GHLGGR Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTATGGGTAATTCCTCCTaGAATATACATCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPMGNSS*NIHHSS Trigger: GGAGGAGTGATGTATATTTCAGGAGGAATTACCCAT...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCTTCCTCTTCCACAAGTaGTATGTATGCTGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIFLFHK*YVCWRK Trigger: CTTTCTCCAGCATACATATCACTTGTGGAAGAGGAA...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115317.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTGCCTTGCAAGACTaGAAATGGGAAGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQPALQD*KWEERP Trigger: GGGCCTCTCTTCCCATTTGCAGTCTTGCAAGGCAGG...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTATGACAGCAATGCCATaGTGGTATCTTGGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTMTAMP*WYLGAS Trigger: GGATGCCCCAAGATACCAGCATGGCATTGCTGTCAT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTGACAGTGGTCATCGGTaGCTTCTGGGTCCATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCDSGHR*LLGPFV Trigger: GACAAATGGACCCAGAAGGCACCGATGACCACTGTC...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTCCATCAAGCCGAAGCTaGTCAAAGCCCTGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCPSSRS*SKPCNT Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGGCTTGATGG...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACATTAATGAGCTCCTGTaGTGTCATCAGCGGAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDINELL*CHQRKS Trigger: CGATTTCCGCTGATGACACCACAGGAGCTCATTAAT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACACCACCAAGAGACTCTaGCAGATCGAAAACCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDTTKRL*QIENLM Trigger: CATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCTATTGTCAGTTCTCATaGAATCCACGGTTTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIYCQFS*NPRFAH Trigger: ATGTGCAAACCGTGGATTTCATGAGAACTGACAATA...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTTGCGCAATTCTTTACTaGCGACAAGCTGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTCAILY*RQAAVS Trigger: TGAGACAGCAGCTTGTCGTCAGTAAAGAATTGCGCA...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCTGGTCAAGGATAGGTaGGTAGTATTCACAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTLVKDR*VVFTAQ Trigger: CTGAGCTGTGAATACTACTCACCTATCCTTGACCAG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTTCGGTTGCGGAGTATTaGAGCAACCAATTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTSVAEY*SNQFSS Trigger: AGAGGAGAATTGGTTGCTGCAATACTCCGCAACCGA...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGATGCGTGTACTTCCTaGCTTGCAAGACTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTDACTS*LARLQM Trigger: CATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGTAGTCACTAGCAGATaGCATCATGACTCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTVVTSR*HHDSVH Trigger: GTGCACAGAGTCATGATGGCATCTGCTAGTGACTAC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTTCAGGAACTCCCCAGTaGTCAGCAATGCAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTSGTPQ*SAMQQN Trigger: ATTTTGCTGCATTGCTGAGCACTGGGGAGTTCCTGA...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTATGACAGCAATGCCATaGTGGTATCTTGGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCMTAMP*WYLGAS Trigger: GGATGCCCCAAGATACCAGCATGGCATTGCTGTCAT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCATTTCGTCCACCAACTaGATACAGAAATCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIISSTN*IQKSFE Trigger: CTCAAAGGATTTCTGTATGCAGTTGGTGGACGAAAT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAGACAGTGGTCATCGGTaGCTTCTGGGTCCATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQDSGHR*LLGPFV Trigger: GACAAATGGACCCAGAAGGCACCGATGACCACTGTC...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCATCAAGCCGAAGCTaGTCAAAGCCCTGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQPSSRS*SKPCNT Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGGCTTGATGG...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTGAATCTGAAGAAAGCTaGCGGCTTCCAGCGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCESEES*RLPAYP Trigger: AGGATACGCTGGAAGCCGCCAGCTTTCTTCAGATTC...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAATGGTGTCAGACCGAATaGCAGTCCTGTCTGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQWCQTE*QSCLTA Trigger: TGCAGTCAGACAGGACTGCCATTCGGTCTGACACCA...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCAGAGATTTCCACTCGTaGGTCTTTTCATCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIRDFHS*VFSSYM Trigger: CATGTATGATGAAAAGACCCACGAGTGGAAATCTCT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTATCTTGGGGCATCCATaGGGGCTAGAGATTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCILGHP*GLEIST Trigger: AGTGGAAATCTCTAGCCCCCATGGATGCCCCAAGAT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTTCTGCCCTCTTAACATaGAAGCAATTGGGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTSALLT*KQLGST Trigger: AGTGGACCCCAATTGCTTCCATGTTAAGAGGGCAGA...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTTGTGGCTTCTTCAGGTaGATAAACTGTAAGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPCGFFR*INCKCT Trigger: TGTACACTTACAGTTTATCCACCTGAAGAAGCCACA...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCTTAAGACGAAGCTGTTaGCATATTTATCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDILRRSC*HIYPLL Trigger: CAGAAGTGGATAAATATGTCAACAGCTTCGTCTTAA...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTTTAAGACGAAGCTGTTaGCATATTTATCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPLRRSC*HIYPLL Trigger: CAGAAGTGGATAAATATGTCAACAGCTTCGTCTTAA...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTAGAGAAAATTTCCGATaGCAGCAATGCCATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTRENFR*QQCHAG Trigger: ACCAGCATGGCATTGCTGTCATCGGAAATTTTCTCT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCATACAGAAATCCTTTaGGGGCACTTAGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTHTEIL*GHLGGR Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCRHSFK*WSSSST Trigger: TGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTGATGCGTGTACTTCCTaGCTTGCAAGACTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCDACTS*LARLQM Trigger: CATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATC...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTGTAGTCACTAGCAGATaGCATCATGACTCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCVVTSR*HHDSVH Trigger: GTGCACAGAGTCATGATGGCATCTGCTAGTGACTAC...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTTCAGGAACTCCCCAGTaGTCAGCAATGCAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCSGTPQ*SAMQQN Trigger: ATTTTGCTGCATTGCTGAGCACTGGGGAGTTCCTGA...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTHSFKC*SSSSTS Trigger: ACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTTTGCAAGACTGCAAATaGGAAGAGAGGCCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTLQDCK*EERPIS Trigger: TGAAATGGGCCTCTCTTCCCATTTGCAGTCTTGCAA...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAGAATCTGAAGAAAGCTaGCGGCTTCCAGCGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQESEES*RLPAYP Trigger: AGGATACGCTGGAAGCCGCCAGCTTTCTTCAGATTC...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGAGATTTCCACTCGTaGGTCTTTTCATCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDRDFHS*VFSSYM Trigger: CATGTATGATGAAAAGACCCACGAGTGGAAATCTCT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAACAGCAATGCCATGCTaGTATCTTGGGGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQTAMPC*YLGASM Trigger: CATGGATGCCCCAAGATACCAGCATGGCATTGCTGT...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACTTAAGACGAAGCTGTTaGCATATTTATCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDLRRSC*HIYPLL Trigger: CAGAAGTGGATAAATATGTCAACAGCTTCGTCTTAA...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCTTCCAGAAGCAAATTaGCGCAAGTATTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTLPEAN*RKYCQF Trigger: GAACTGACAATACTTGCGTCAATTTGCTTCTGGAAG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAATGCGCAATTCTTTACTaGCGACAAGCTGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQCAILY*RQAAVS Trigger: TGAGACAGCAGCTTGTCGTCAGTAAAGAATTGCGCA...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTATGGGTAATTCCTCCTaGAATATACATCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTMGNSS*NIHHSS Trigger: GGAGGAGTGATGTATATTTCAGGAGGAATTACCCAT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACTGGTCAAGGATAGGTaGGTAGTATTCACAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQLVKDR*VVFTAQ Trigger: CTGAGCTGTGAATACTACTCACCTATCCTTGACCAG...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACTTCCTCTTCCACAAGTaGTCTACTCAGAATACATTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDFLFHK*STQNTF Trigger: AAATGTATTCTGAGTAGATCACTTGTGGAAGAGGAA...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCCTGCCTTGCAAGACTaGAAATGGGAAGAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHPALQD*KWEERP Trigger: GGGCCTCTCTTCCCATTTGCAGTCTTGCAAGGCAGG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCAGATCGAAAACCTTATaGCATTCATTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIRSKTL*HSFFSG Trigger: TCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTTTGCAAGACTGCAAATaGGAAGAGAGGCCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCLQDCK*EERPIS Trigger: TGAAATGGGCCTCTCTTCCCATTTGCAGTCTTGCAA...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTAACACCACAGAACTGTaGCTGTTGCTGGTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCNTTEL*LLLVKM Trigger: CATCTTTACCAGCAACAGCCACAGTTCTGTGGTGTT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTATTAATGAGCTCCTGTaGTGTCATCAGCGGAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCINELL*CHQRKS Trigger: CGATTTCCGCTGATGACACCACAGGAGCTCATTAAT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAATCTGCCCTCTTAACATaGAAGCAATTGGGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQSALLT*KQLGST Trigger: AGTGGACCCCAATTGCTTCCATGTTAAGAGGGCAGA...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCCCATTCATTTTTCTCTaGATCATACTTCTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIPFIFL*IILLHY Trigger: ATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGG...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCATTCATTTTTCTCTaGATCATACTTCTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPPFIFL*IILLHY Trigger: ATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGG...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| 3UTR CAA 72 bp | TGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTaGACAGATGTGTCAAAAATACTTTATGAAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WCVLNAPTQSGG*TDVSKILYEKR Trigger: CCTCTTTTCATAAAGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTCTTCCAGAAGCAAATTaGCGCAAGTATTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCLPEAN*RKYCQF Trigger: GAACTGACAATACTTGCGTCAATTTGCTTCTGGAAG...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTATTTCGTCCACCAACTaGATACAGAAATCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTISSTN*IQKSFE Trigger: CTCAAAGGATTTCTGTATGCAGTTGGTGGACGAAAT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACAGGGAGTTCTCCAGCTaGATTTCGTCCACCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHREFSS*ISSTNC Trigger: GCAGTTGGTGGACGAAATGCAGCTGGAGAACTCCCT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATCGAAAACCTTATaGCATTCATTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDRSKTL*HSFFSG Trigger: TCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAAACACCACAGAACTGTaGCTGTTGCTGGTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQNTTEL*LLLVKM Trigger: CATCTTTACCAGCAACAGCCACAGTTCTGTGGTGTT...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCCATCAAGCCGAAGCTaGTCAAAGCCCTGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHPSSRS*SKPCNT Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGGCTTGATGG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAATTAATGAGCTCCTGTaGTGTCATCAGCGGAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQINELL*CHQRKS Trigger: CGATTTCCGCTGATGACACCACAGGAGCTCATTAAT...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTAGAGATTTCCACTCGTaGGTCTTTTCATCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTRDFHS*VFSSYM Trigger: CATGTATGATGAAAAGACCCACGAGTGGAAATCTCT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCCATTCATTTTTCTCTaGATCATACTTCTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDPFIFL*IILLHY Trigger: ATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAACCACCAAGAGACTCTaGCAGATCGAAAACCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQTTKRL*QIENLM Trigger: CATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGT...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTTGTGGCTTCTTCAGGTaGATAAACTGTAAGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTCGFFR*INCKCT Trigger: TGTACACTTACAGTTTATCCACCTGAAGAAGCCACA...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACTTCCAGAAGCAAATTaGCGCAAGTATTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQLPEAN*RKYCQF Trigger: GAACTGACAATACTTGCGTCAATTTGCTTCTGGAAG...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACATGACAGCAATGCCATaGTGGTATCTTGGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHMTAMP*WYLGAS Trigger: GGATGCCCCAAGATACCAGCATGGCATTGCTGTCAT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTATTTCGTCCACCAACTaGATACAGAAATCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCISSTN*IQKSFE Trigger: CTCAAAGGATTTCTGTATGCAGTTGGTGGACGAAAT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTAGAGATTTCCACTCGTaGGTCTTTTCATCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCRDFHS*VFSSYM Trigger: CATGTATGATGAAAAGACCCACGAGTGGAAATCTCT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACATCTTGGGGCATCCATaGGGGCTAGAGATTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHILGHP*GLEIST Trigger: AGTGGAAATCTCTAGCCCCCATGGATGCCCCAAGAT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACACAGCAATGCCATGCTaGTATCTTGGGGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHTAMPC*YLGASM Trigger: CATGGATGCCCCAAGATACCAGCATGGCATTGCTGT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCTGGTCAAGGATAGGTaGGTAGTATTCACAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHLVKDR*VVFTAQ Trigger: CTGAGCTGTGAATACTACTCACCTATCCTTGACCAG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHRHSFK*WSSSST Trigger: TGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035973.5 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACGATGCGTGTACTTCCTaGCTTGCAAGACTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHDACTS*LARLQM Trigger: CATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATC...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTATTCTTCTTTTGAGCTaGAACAGTACAAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTILLLS*NSTNGI Trigger: TATCCCATTTGTACTGTTGCAGCTCAAAAGAAGAAT...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCCATTCATTTTTCTCTaGATCATACTTCTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTPFIFL*IILLHY Trigger: ATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAATGTGGCTTCTTCAGGTaGATAAACTGTAAGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQCGFFR*INCKCT Trigger: TGTACACTTACAGTTTATCCACCTGAAGAAGCCACA...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAATTAAGACGAAGCTGTTaGCATATTTATCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQLRRSC*HIYPLL Trigger: CAGAAGTGGATAAATATGTCAACAGCTTCGTCTTAA...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACAGAGAAAATTTCCGATaGCAGCAATGCCATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHRENFR*QQCHAG Trigger: ACCAGCATGGCATTGCTGTCATCGGAAATTTTCTCT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACTGGAGAAAGTGGAGTTaGCCTGGATGTTTTAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHWRKWS*PGCFKH Trigger: GTGCTTAAAACATCCAGGTCAACTCCACTTTCTCCA...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115317.9 |
||
| CDS-3UTR GCA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTAGATCGAAAACCTTATaGCATTCATTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCRSKTL*HSFFSG Trigger: TCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCT...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACAACACCACAGAACTGTaGCTGTTGCTGGTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHNTTEL*LLLVKM Trigger: CATCTTTACCAGCAACAGCCACAGTTCTGTGGTGTT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACACCACCAAGAGACTCTaGCAGATCGAAAACCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHTTKRL*QIENLM Trigger: CATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCTTCCAGAAGCAAATTaGCGCAAGTATTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHLPEAN*RKYCQF Trigger: GAACTGACAATACTTGCGTCAATTTGCTTCTGGAAG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACATGGGTAATTCCTCCTaGAATATACATCACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHMGNSS*NIHHSS Trigger: GGAGGAGTGATGTATATTTCAGGAGGAATTACCCAT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAAGATCGAAAACCTTATaGCATTCATTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQRSKTL*HSFFSG Trigger: TCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCT...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCATTCATTTTTCTCTaGATCATACTTCTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DVSKILYEKREVAHASWQPFIFL*IILLHY Trigger: ATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGG...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACATTTCGTCCACCAACTaGATACAGAAATCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHISSTN*IQKSFE Trigger: CTCAAAGGATTTCTGTATGCAGTTGGTGGACGAAAT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACTGTGGCTTCTTCAGGTaGATAAACTGTAAGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHCGFFR*INCKCT Trigger: TGTACACTTACAGTTTATCCACCTGAAGAAGCCACA...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACAGATCGAAAACCTTATaGCATTCATTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHRSKTL*HSFFSG Trigger: TCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS CCA 90 bp | TGGGAAGAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATCGGTTGCGGAGTATTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WEERPISLPRHSFKC*SSSSTSDRLRSIAA Trigger: TGCTGCAATACTCCGCAACCGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
||
| CDS-3UTR CAA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTGCCTTCTGGGTCCATTaGTCAGTATCAGGGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPAFWVH*SVSGSK Trigger: CTTCGACCCTGATACTGACAAATGGACCCAGAAGGC...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS GCA 90 bp | AAATGGGAAGAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACAAGTGATCGGTTGCGGAGTATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KWEERPISLPRHSFK*WSSSSTSDRLRSIA Trigger: TGCAATACTCCGCAACCGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
||
| CDS-3UTR CAA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACATCGGTTGCGGAGTATaGCAGCAACCAATTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDIGCGV*QQPILL Trigger: GAGGAGAATTGGTTGCTGCAATACTCCGCAACCGAT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
||
| CDS-3UTR CAA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCACAGAACTGTGGCTGTaGCTGGTAAAGATGCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GNLLCTVSYWSRLPPFDITELWL*LVKMRV Trigger: TACACGCATCTTTACCAGCAACAGCCACAGTTCTGT...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CAA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCGCATACAGAAATCCTTaGAGGGCACTTAGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIAYRNP*RALRWK Trigger: CTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATGC...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS CCA 90 bp | TGGGAAGAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATATGTATGCTGGAGAAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WEERPISLPRHSFKC*SSSSTSDMYAGESG Trigger: TCCACTTTCTCCAGCATACATATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115317.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACACAGAACTGTGGCTGTaGCTGGTAAAGATGCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDTELWL*LVKMRV Trigger: TACACGCATCTTTACCAGCAACAGCCACAGTTCTGT...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACGCATACAGAAATCCTTaGAGGGCACTTAGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDAYRNP*RALRWK Trigger: CTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATGC...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTGCCTTCTGGGTCCATTaGTCAGTATCAGGGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTAFWVH*SVSGSK Trigger: CTTCGACCCTGATACTGACAAATGGACCCAGAAGGC...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCATAAACGGCATCATTaGGTAATTGCTGGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDHKRHH*VIAGFQ Trigger: CTGGAAGCCAGCAATTACCAAATGATGCCGTTTATG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS-3UTR CAA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTGCCTTCTGGGTCCATTaGTCAGTATCAGGGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCAFWVH*SVSGSK Trigger: CTTCGACCCTGATACTGACAAATGGACCCAGAAGGC...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
||
| CDS GCA 90 bp | AAATGGGAAGAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACAAGTGATATGTATGCTGGAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KWEERPISLPRHSFK*WSSSSTSDMYAGES Trigger: ACTTTCTCCAGCATACATATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115317.9 |
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| CDS-3UTR CAA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCCATGAAATCCACGGTTaGCACATAATTAATGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIHEIHG*HIINEL Trigger: GAGCTCATTAATTATGTGCAAACCGTGGATTTCATG...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAAGCCTTCTGGGTCCATTaGTCAGTATCAGGGTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: DVSKILYEKREVAHASWQAFWVH*SVSGSK Trigger: CTTCGACCCTGATACTGACAAATGGACCCAGAAGGC...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | TGTCTTAGAAACTTGGTGTGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACCATGAAATCCACGGTTaGCACATAATTAATGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CLRNLVCSQCTHTVRWVDHEIHG*HIINEL Trigger: GAGCTCATTAATTATGTGCAAACCGTGGATTTCATG...GTCAACCCACCTGACTGTGTGGGTGCATTGAGAACACACCAAGTTTCTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCATAAACGGCATCATTaGGTAATTGCTGGCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTHKRHH*VIAGFQ Trigger: CTGGAAGCCAGCAATTACCAAATGATGCCGTTTATG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCATAGGTCCATTCATTaGTTCTCGGATTGTAACATT | + |
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Preference number: 5 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPHRSIH*FSDCNI Trigger: AATGTTACAATCCGAGAACAAATGAATGGACCTATG...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | GGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCCCTTTGACATCCATAGGTCCATTCATTaGTTCTCGGATTGTAACATT | + |
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Preference number: 5 (lower is better) Translates to: GNLLCTVSYWSRLPPFDIHRSIH*FSDCNI Trigger: AATGTTACAATCCGAGAACAAATGAATGGACCTATG...GATGTCAAAGGGAGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | CTCATGCGAGTTGGCAACCTTTTGTGTACTGTTTCCTATTGGAGCAGGCTGCCTCTACTCAGAATACATTaGTCATCCTCTGAACATTCT | + |
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Preference number: 5 (lower is better) Translates to: LMRVGNLLCTVSYWSRLPLLRIH*SSSEHS Trigger: AGAATGTTCAGAGGATGACAAATGTATTCTGAGTAG...AGGCAGCCTGCTCCAATAGGAAACAGTACACAAAAGGTTGCCAACTCGCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115319.9 |
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| CDS CCA 90 bp | TGGGAAGAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATAGTTTTAAAAGGAATTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: WEERPISLPRHSFKC*SSSSTSDSFKRNSR Trigger: TCTTGAATTCCTTTTAAAACTATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115316.9 |
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| CDS-3UTR CAA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCAGCGCTTAAGGCTGTaGCTGGACAGGACAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHQRLRL*LDRTKA Trigger: TGCCTTTGTCCTGTCCAGCAACAGCCTTAAGCGCTG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | TGTTCTCAATGCACCCACACAGTCAGGTGGGTTGACAGATGTGTCAAAAATACTCATGAAATCCACGGTTaGCACATAATTAATGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CSQCTHTVRWVDRCVKNTHEIHG*HIINEL Trigger: GAGCTCATTAATTATGTGCAAACCGTGGATTTCATG...AGTATTTTTGACACATCTGTCAACCCACCTGACTGTGTGGGTGCATTGAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | GGTCATGCTTTCCCCCACAAACTAGTGTTGGTGAATTTCAGTTATTTCTCCTGTCATGAAATCCACGGTTaGCACATAATTAATGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GHAFPHKLVLVNFSYFSCHEIHG*HIINEL Trigger: GAGCTCATTAATTATGTGCAAACCGTGGATTTCATG...ACAGGAGAAATAACTGAAATTCACCAACACTAGTTTGTGGGGGAAAGCATGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS CCA 90 bp | TGGATAAACTGTAAGTGTACAAGCTCGAATACCACCAAGAGACTCTaGCAGATCGAAAACCTTATGCCATTCATTTTTCTCTGGATCATA | + |
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Preference number: 5 (lower is better) Translates to: WINCKCTSSNTTKRL*QIENLMPFIFLWII Trigger: TATGATCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGTATTCGAGCTTGTACACTTACAGTTTATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACACAGAACTGTGGCTGTaGCTGGTAAAGATGCGTGTA | + |
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Preference number: 5 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHTELWL*LVKMRV Trigger: TACACGCATCTTTACCAGCAACAGCCACAGTTCTGT...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACGCATACAGAAATCCTTaGAGGGCACTTAGGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHAYRNP*RALRWK Trigger: CTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATGC...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCATAAACGGCATCATTaGGTAATTGCTGGCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHHKRHH*VIAGFQ Trigger: CTGGAAGCCAGCAATTACCAAATGATGCCGTTTATG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | GATGTGTCAAAAATACTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACATAGGTCCATTCATTaGTTCTCGGATTGTAACATT | + |
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Preference number: 5 (lower is better) Translates to: DVSKILYEKREVAHASWQHRSIH*FSDCNI Trigger: AATGTTACAATCCGAGAACAAATGAATGGACCTATG...TTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAGTATTTTTGACACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS-3UTR CAA 90 bp | AACTTCTTCACTTTGAAACCTAGTGAGCACAGTTGTACATTTACTATAATCCACCTGAACATTCTTCTTTaGAGCTGCAACAGTACAAAT | + |
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Preference number: 5 (lower is better) Translates to: NFFTLKPSEHSCTFTIIHLNILL*SCNSTN Trigger: ATTTGTACTGTTGCAGCTCAAAAGAAGAATGTTCAG...GTGGATTATAGTAAATGTACAACTGTGCTCACTAGGTTTCAAAGTGAAGAAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115319.9 |
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| CDS CAA 90 bp | CAGGTAGCTTTGAAGAGGTCAAGTTCGGTGCAGCGCTTAAGGCTGTaGCTGGACAGGACAAAGGCAAGGCGCTCGAAGGGAAGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: QVALKRSSSVQRLRL*LDRTKARRSKGSFR Trigger: CCTGAAGCTTCCCTTCGAGCGCCTTGCCTTTGTCCTGTCCAGCAACAGCCTTAAGCGCTGCACCGAACTTGACCTCTTCAAAGCTACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS CAA 72 bp | TTGAAGAGGTCAAGTTCGGTGCAGCGCTTAAGGCTGTaGCTGGACAGGACAAAGGCAAGGCGCTCGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LKRSSSVQRLRL*LDRTKARRSKG Trigger: TCCCTTCGAGCGCCTTGCCTTTGTCCTGTCCAGCAACAGCCTTAAGCGCTGCACCGAACTTGACCTCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS GCA 72 bp | GAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACAAGTGATCGGTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: ERPISLPRHSFK*WSSSSTSDRLR Trigger: CCGCAACCGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
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| CDS CAA 90 bp | AGCCGAAGCTGGTCAAAGCCCTGTAACACCACAGAACTGTGGCTGTaGCTGGTAAAGATGCGTGTACTTCCTGCCTTGCAAGACTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SRSWSKPCNTTELWL*LVKMRVLPALQDCK Trigger: TTTGCAGTCTTGCAAGGCAGGAAGTACACGCATCTTTACCAGCAACAGCCACAGTTCTGTGGTGTTACAGGGCTTTGACCAGCTTCGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS CCA 72 bp | AGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATCGGTTGCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RPISLPRHSFKC*SSSSTSDRLRS Trigger: ACTCCGCAACCGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
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| CDS CAA 72 bp | TGGTCAAAGCCCTGTAACACCACAGAACTGTGGCTGTaGCTGGTAAAGATGCGTGTACTTCCTGCCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: WSKPCNTTELWL*LVKMRVLPALQ Trigger: TTGCAAGGCAGGAAGTACACGCATCTTTACCAGCAACAGCCACAGTTCTGTGGTGTTACAGGGCTTTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS GCA 72 bp | GAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACAAGTGATCTACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ERPISLPRHSFK*WSSSSTSDLLR Trigger: TCTGAGTAGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115319.9 |
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| CDS GCA 72 bp | GAGAGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTaGTGGTCTTCCTCTTCCACAAGTGATATGTATGCT | + |
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Preference number: 6 (lower is better) Translates to: ERPISLPRHSFK*WSSSSTSDMYA Trigger: AGCATACATATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115317.9 |
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| CDS CCA 72 bp | AGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATATGTATGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RPISLPRHSFKC*SSSSTSDMYAG Trigger: TCCAGCATACATATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115317.9 |
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| CDS CAA 72 bp | GGTCTTCCTCTTCCACAAGTGATCGGTTGCGGAGTATaGCAGCAACCAATTCTCCTCTGTGAAGAATATCCA | + |
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Preference number: 6 (lower is better) Translates to: GLPLPQVIGCGV*QQPILLCEEYP Trigger: TGGATATTCTTCACAGAGGAGAATTGGTTGCTGCAATACTCCGCAACCGATCACTTGTGGAAGAGGAAGACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035973.5 |
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| CDS CCA 72 bp | AGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATCTACTCAGAATA | + |
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Preference number: 6 (lower is better) Translates to: RPISLPRHSFKC*SSSSTSDLLRI Trigger: TATTCTGAGTAGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115319.9 |
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| CDS CCA 72 bp | AGGCCCATTTCACTTCCAAGGCACAGTTTCAAGTGCTaGTCTTCCTCTTCCACAAGTGATAGTTTTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: RPISLPRHSFKC*SSSSTSDSFKR Trigger: CCTTTTAAAACTATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115316.9 |
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| CDS GCA 72 bp | ATACCACCAAGAGACTCTGGCAGATCGAAAACCTTATaGCATTCATTTTTCTCTGGATCATACTTCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: IPPRDSGRSKTL*HSFFSGSYFCT Trigger: AGTGCAGAAGTATGATCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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| CDS CCA 72 bp | TGTAAGTGTACAAGCTCGAATACCACCAAGAGACTCTaGCAGATCGAAAACCTTATGCCATTCATTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CKCTSSNTTKRL*QIENLMPFIFL Trigger: GAGAAAAATGAATGGCATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGTATTCGAGCTTGTACACTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035973.5 ENSMUST00000115313.8 ENSMUST00000115316.9 ENSMUST00000115317.9 ENSMUST00000115319.9 |
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