Pregenerated sensors for KLHL12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026455Ensembl transcript IDs: ENSMUST00000027725.11, ENSMUST00000112232.8, ENSMUST00000116528.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCCAGTGCCAAGATGGTACAACATTTTACATTAGAAAGACTGTaGAATCAAATAACATGTCCTTTCCAGCCTTCCAATTTACACTTC | + |
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Preference number: 1 (lower is better) Translates to: VSSAKMVQHFTLERL*NQITCPFQPSNLHF Trigger: GAAGTGTAAATTGGAAGGCTGGAAAGGACATGTTATTTGATTTCACAGTCTTTCTAATGTAAAATGTTGTACCATCTTGGCACTGGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGCCACAAACTGTTCCTTaGAGTAGTCACTGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QRAMIWFPTSKRAFSSLEPQTVP*SSHWLQ Trigger: CTGGAGCCAGTGACTACTCCAAGGAACAGTTTGTGG...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTACTGATGCTGCCAGAGAAGCAGCTGAGCTTGTTGGCAGGCATAAGGTAGACCACAGAGAGCCATaGTCTGGTTTCCCACATCCA | + |
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Preference number: 2 (lower is better) Translates to: HFTDAAREAAELVGRHKVDHREP*SGFPHP Trigger: TGGATGTGGGAAACCAGATCATGGCTCTCTGTGGTC...TACCTTATGCCTGCCAACAAGCTCAGCTGCTTCTCTGGCAGCATCAGTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR-3UTR GCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATTCATCTCAGCACTGGTaGCTGGAATCCCCCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VIVFSYSKELWWLELPLYSSQHW*LESPCA Trigger: TGCACAGGGGGATTCCAGGCACCAGTGCTGAGATGA...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTACTGATGCTGCCAGAGAAGCAGCTGAGCTTGTTGGCAGGCATAAGGTATCATCATCTCAGCACTaGTGCCTGGAATCCCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: HFTDAAREAAELVGRHKVSSSQH*CLESPC Trigger: ACAGGGGGATTCCAGGCACCAGTGCTGAGATGATGA...TACCTTATGCCTGCCAACAAGCTCAGCTGCTTCTCTGGCAGCATCAGTAAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGTCTGGAAAGGATCCTTaGTTCTCCCACAAACTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QRAMIWFPTSKRAFSSLESGKDP*FSHKLF Trigger: GAACAGTTTGTGGGAGAATCAAGGATCCTTTCCAGA...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTACTGATGCTGCCAGAGAAGCAGCTGAGCTTGTTGGCAGGCATAAGGTACTTCAACATGTCTGCTaGAGGCAGCACTACCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: HFTDAAREAAELVGRHKVLQHVC*RQHYPQ Trigger: TTGTGGGTAGTGCTGCCTTCAGCAGACATGTTGAAG...TACCTTATGCCTGCCAACAAGCTCAGCTGCTTCTCTGGCAGCATCAGTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGGTGCGAAGGAGAGTGTaGATCAAACAAGTACAATCA | + |
|
Preference number: 2 (lower is better) Translates to: QRAMIWFPTSKRAFSSLEVRRRV*IKQVQS Trigger: TGATTGTACTTGTTTGATGCACACTCTCCTTCGCAC...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATGAGCAAGATGACCAGTaGGAAGGAGAGTGTGCATCA | + |
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Preference number: 2 (lower is better) Translates to: VIVFSYSKELWWLELPLYEQDDQ*EGECAS Trigger: TGATGCACACTCTCCTTCGCACTGGTCATCTTGCTC...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTTACTGATGCTGCCAGAGAAGCAGCTGAGCTTGTTGGCAGGCATAAGGTATCCCACATCCAAACGTaGATTCTCTTCCCTGGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: HFTDAAREAAELVGRHKVSHIQT*ILFPGV Trigger: TACTCCAGGGAAGAGAATGCACGTTTGGATGTGGGA...TACCTTATGCCTGCCAACAAGCTCAGCTGCTTCTCTGGCAGCATCAGTAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR-3UTR CCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATCCACAAACTGTTCCTTaGAGTAGTCACTGGCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VIVFSYSKELWWLELPLYPQTVP*SSHWLQ Trigger: CTGGAGCCAGTGACTACTCCAAGGAACAGTTTGTGG...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTTCATCATCTCAGCACTaGTGCCTGGAATCCCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VALDSPGRWSFHPFEDQTSSSQH*CLESPC Trigger: ACAGGGGGATTCCAGGCACCAGTGCTGAGATGATGA...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTACTGATGCTGCCAGAGAAGCAGCTGAGCTTGTTGGCAGGCATAAGGTACAGAGAGCCATGATCTaGTTTCCCACATCCAAACGT | + |
|
Preference number: 2 (lower is better) Translates to: HFTDAAREAAELVGRHKVQRAMI*FPTSKR Trigger: ACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG...TACCTTATGCCTGCCAACAAGCTCAGCTGCTTCTCTGGCAGCATCAGTAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR-3UTR CCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATCAGAGAGCCATGATCTaGTTTCCCACATCCAAACGT | + |
|
Preference number: 2 (lower is better) Translates to: VIVFSYSKELWWLELPLYQRAMI*FPTSKR Trigger: ACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATTCTGGAAAGGATCCTTaGTTCTCCCACAAACTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VIVFSYSKELWWLELPLYSGKDP*FSHKLF Trigger: GAACAGTTTGTGGGAGAATCAAGGATCCTTTCCAGA...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGATCATCTCAGCACTGGTaGCTGGAATCCCCCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGSSQHW*LESPCA Trigger: TGCACAGGGGGATTCCAGGCACCAGTGCTGAGATGA...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAAGACCACAGAGAGCCATaGTCTGGTTTCCCACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: WLELPLYLEKVFLLLRGKDHREP*SGFPHP Trigger: TGGATGTGGGAAACCAGATCATGGCTCTCTGTGGTC...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAACATGTCTGCTGAAGGCAGCACTACCCACAAATTCTCTTAAAGCCATTCAATGTCTTCCTAAGTaGGGACAGCATGAATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PSTCLLKAALPTNSLKAIQCLPK*GQHESS Trigger: GGAAGATTCATGCTGTCCTCACTTAGGAAGACATTG...AATGGCTTTAAGAGAATTTGTGGGTAGTGCTGCCTTCAGCAGACATGTTGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR-3UTR TCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTCAATGTCTTCCTAAGTaGGGACAGCATGAATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VALDSPGRWSFHPFEDQTQCLPK*GQHESS Trigger: GGAAGATTCATGCTGTCCTCACTTAGGAAGACATTG...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAAGAGCAAGATGACCAGTaGGAAGGAGAGTGTGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: ASLILTFSTVNLSSLQCQEQDDQ*EGECAS Trigger: TGATGCACACTCTCCTTCGCACTGGTCATCTTGCTC...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTGTGCGAAGGAGAGTGTaGATCAAACAAGTACAATCA | + |
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Preference number: 2 (lower is better) Translates to: VALDSPGRWSFHPFEDQTVRRRV*IKQVQS Trigger: TGATTGTACTTGTTTGATGCACACTCTCCTTCGCAC...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGAGAGCAAGATGACCAGTaGGAAGGAGAGTGTGCATCA | + |
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Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGEQDDQ*EGECAS Trigger: TGATGCACACTCTCCTTCGCACTGGTCATCTTGCTC...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAATCCCACATCCAAACGTaGATTCTCTTCCCTGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: ASLILTFSTVNLSSLQCQSHIQT*ILFPGV Trigger: TACTCCAGGGAAGAGAATGCACGTTTGGATGTGGGA...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGACCACAAACTGTTCCTTaGAGTAGTCACTGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGPQTVP*SSHWLQ Trigger: CTGGAGCCAGTGACTACTCCAAGGAACAGTTTGTGG...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGACCCCTGTGCACACAGTaGGGAATAAACATTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGPLCTQ*GINILE Trigger: TTCCAGAATGTTTATTCCTCACTGTGTGCACAGGGG...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAACCCCTGTGCACACAGTaGGGAATAAACATTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: WLELPLYLEKVFLLLRGKPLCTQ*GINILE Trigger: TTCCAGAATGTTTATTCCTCACTGTGTGCACAGGGG...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGATCCCACATCCAAACGTaGATTCTCTTCCCTGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGSHIQT*ILFPGV Trigger: TACTCCAGGGAAGAGAATGCACGTTTGGATGTGGGA...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGACAGAGAGCCATGATCTaGTTTCCCACATCCAAACGT | + |
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Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGQRAMI*FPTSKR Trigger: ACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGATCTGGAAAGGATCCTTaGTTCTCCCACAAACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGSGKDP*FSHKLF Trigger: GAACAGTTTGTGGGAGAATCAAGGATCCTTTCCAGA...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAACAATTTACACTTCAGTaGTCTTCTGGGTTCACCTAC | + |
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Preference number: 2 (lower is better) Translates to: ASLILTFSTVNLSSLQCQQFTLQ*SSGFTY Trigger: GTAGGTGAACCCAGAAGATCACTGAAGTGTAAATTG...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAAGTGCGAAGGAGAGTGTaGATCAAACAAGTACAATCA | + |
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Preference number: 2 (lower is better) Translates to: ASLILTFSTVNLSSLQCQVRRRV*IKQVQS Trigger: TGATTGTACTTGTTTGATGCACACTCTCCTTCGCAC...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTAGGTATATTGAACTCTaGACATTTACAGCATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: VALDSPGRWSFHPFEDQTRYIEL*TFTASL Trigger: AAGAGATGCTGTAAATGTGCAGAGTTCAATATACCT...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR TCA 72 bp | ACAGTAAGAAAGTGCTCCTCAGACCACAGAGAGCCATaGTCTGGTTTCCCACATCCAAACGTGCATTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: TVRKCSSDHREP*SGFPHPNVHSL Trigger: AAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTGTGGTCTGAGGAGCACTTTCTTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCAACATGTCTGCTGAAGGCAGCACTACCCACAAATTCTCTTAAAGCCATTGGTCTTTTCACCCATTaGAAGACCAAACTGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: PSTCLLKAALPTNSLKAIGLFTH*KTKLPL Trigger: CAGTGGCAGTTTGGTCTTCAAATGGGTGAAAAGACC...AATGGCTTTAAGAGAATTTGTGGGTAGTGCTGCCTTCAGCAGACATGTTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| 3UTR TCA 72 bp | CACACAGTGAGGAATAAACATTCTGGAAAGGATCCTTaGTTCTCCCACAAACTGTTCCTTGGAGTAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: HTVRNKHSGKDP*FSHKLFLGVVT Trigger: AGTGACTACTCCAAGGAACAGTTTGTGGGAGAATCAAGGATCCTTTCCAGAATGTTTATTCCTCACTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTTTTACCACAGGTATATaGAACTCTGCACATTTACAG | + |
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Preference number: 3 (lower is better) Translates to: VALDSPGRWSFHPFEDQTFTTGI*NSAHLQ Trigger: CTGTAAATGTGCAGAGTTCAATATACCTGTGGTAAA...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| 3UTR GCA 72 bp | CAGATATTTCTAGTTTACCACAGGTATATTGAACTCTaGACATTTACAGCATCTCTTATTCTAACCTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QIFLVYHRYIEL*TFTASLILTFS Trigger: GGAAAAGGTTAGAATAAGAGATGCTGTAAATGTGCAGAGTTCAATATACCTGTGGTAAACTAGAAATATCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| CDS-3UTR TCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGGAATCTCGTCGCACTTaGTTAGCTTCTCCACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QRAMIWFPTSKRAFSSLEESRRT*LASPPP Trigger: GGGAGGTGGAGAAGCTAATCAAGTGCGACGAGATTC...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| CDS-3UTR TCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGCGGCTTCCCCTTCTCTaGAAGCTCACTAGTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: QRAMIWFPTSKRAFSSLERLPLL*KLTSEH Trigger: ATGTTCACTAGTGAGCTTTCAGAGAAGGGGAAGCCG...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| CDS-3UTR TCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTGACATTCCACCGAACTaGGGCGGGAACGGCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: VALDSPGRWSFHPFEDQTDIPPN*GGNGHR Trigger: ACGATGGCCGTTCCCGCCTCAGTTCGGTGGAATGTC...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| CDS-3UTR GCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGGCAGGGAAGTCTTTCTaGTCCACTCTCAAGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: QRAMIWFPTSKRAFSSLEAGKSF*STLKVT Trigger: TGTGACCTTGAGAGTGGAGCAGAAAGACTTCCCTGC...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
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| CDS-3UTR CCA 90 bp | CCTTCAACATGTCTGCTGAAGGCAGCACTACCCACAAATTCTCTTAAAGCCATTCCAGAAGCACTTCATTaGCTCCTAGCCGGGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PSTCLLKAALPTNSLKAIPEALH*LLAGPL Trigger: CAAGGGCCCGGCTAGGAGCCAATGAAGTGCTTCTGG...AATGGCTTTAAGAGAATTTGTGGGTAGTGCTGCCTTCAGCAGACATGTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
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| CDS-3UTR TCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATGAATCTCGTCGCACTTaGTTAGCTTCTCCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYESRRT*LASPPP Trigger: GGGAGGTGGAGAAGCTAATCAAGTGCGACGAGATTC...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAAGACATTCCACCGAACTaGGGCGGGAACGGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLILTFSTVNLSSLQCQDIPPN*GGNGHR Trigger: ACGATGGCCGTTCCCGCCTCAGTTCGGTGGAATGTC...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATCGGCTTCCCCTTCTCTaGAAGCTCACTAGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYRLPLL*KLTSEH Trigger: ATGTTCACTAGTGAGCTTTCAGAGAAGGGGAAGCCG...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGGTAAACTACAGCGGATaGAAGGCTCAGCATCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: QRAMIWFPTSKRAFSSLEVNYSG*KAQHQL Trigger: TAATTGATGCTGAGCCTTTCATCCGCTGTAGTTTAC...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAAGACATTCCACCGAACTaGGGCGGGAACGGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLELPLYLEKVFLLLRGKDIPPN*GGNGHR Trigger: ACGATGGCCGTTCCCGCCTCAGTTCGGTGGAATGTC...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATGCAGGGAAGTCTTTCTaGTCCACTCTCAAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYAGKSF*STLKVT Trigger: TGTGACCTTGAGAGTGGAGCAGAAAGACTTCCCTGC...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATGCTAAACACCTCAGCTaGTTGCATCAGGTCAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYAKHLS*LHQVNA Trigger: TGCGTTGACCTGATGCAAGCAGCTGAGGTGTTTAGC...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAACCAGAAGCACTTCATTaGCTCCTAGCCGGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLILTFSTVNLSSLQCQPEALH*LLAGPL Trigger: CAAGGGCCCGGCTAGGAGCCAATGAAGTGCTTCTGG...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATACCGTCTCTTGCGAGTaGTACTTGGTAAAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYTVSCE*YLVKSS Trigger: GGAGCTTTTTACCAAGTATCACTCGCAAGAGACGGT...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTGCTAAACACCTCAGCTaGTTGCATCAGGTCAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: VALDSPGRWSFHPFEDQTAKHLS*LHQVNA Trigger: TGCGTTGACCTGATGCAAGCAGCTGAGGTGTTTAGC...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATCGCTCCTTCTTGGCATaGTTCACCCAGTTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYRSFLA*FTQLIT Trigger: TGTTATCAACTGGGTGAAGCATGCCAAGAAGGAGCG...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGCATCAACTAGATCTCTaGATTGTAAACTACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRAMIWFPTSKRAFSSLEHQLDL*IVNYSG Trigger: TCCGCTGTAGTTTACAATGCAGAGATCTAGTTGATG...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCACTTGATTCGCCAGGAAGATGGTCTTTTCACCCATTTGAAGACCAAACTCGCTCCTTCTTGGCATaGTTCACCCAGTTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: VALDSPGRWSFHPFEDQTRSFLA*FTQLIT Trigger: TGTTATCAACTGGGTGAAGCATGCCAAGAAGGAGCG...AGTTTGGTCTTCAAATGGGTGAAAAGACCATCTTCCTGGCGAATCAAGTGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGTTGTCCAGGAATCAGTaGGAATGTTATAAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRAMIWFPTSKRAFSSLELSRNQ*ECYKLQ Trigger: TTGAAGCTTATAACATTCGCACTGATTCCTGGACAA...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027725.11 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATGTAAACTACAGCGGATaGAAGGCTCAGCATCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VIVFSYSKELWWLELPLYVNYSG*KAQHQL Trigger: TAATTGATGCTGAGCCTTTCATCCGCTGTAGTTTAC...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAAGCAGGGAAGTCTTTCTaGTCCACTCTCAAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASLILTFSTVNLSSLQCQAGKSF*STLKVT Trigger: TGTGACCTTGAGAGTGGAGCAGAAAGACTTCCCTGC...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGAACATCAATAGGAGACTaGTGGCTTCCGAAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGTSIGD*WLPKPP Trigger: TGGGGGCTTCGGAAGCCAGCAGTCTCCTATTGATGT...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAAACATCAATAGGAGACTaGTGGCTTCCGAAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLELPLYLEKVFLLLRGKTSIGD*WLPKPP Trigger: TGGGGGCTTCGGAAGCCAGCAGTCTCCTATTGATGT...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAACATGTCTGCTGAAGGCAGCACTACCCACAAATTCTCTTAAAGCCATTATTCCCATCGTATCCTaGAATTGCATAGAGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTCLLKAALPTNSLKAIIPIVS*NCIESP Trigger: GGGAGACTCTATGCAATTGCAGGATACGATGGGAAT...AATGGCTTTAAGAGAATTTGTGGGTAGTGCTGCCTTCAGCAGACATGTTGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027725.11 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGACGGCTTCCCCTTCTCTaGAAGCTCACTAGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGRLPLL*KLTSEH Trigger: ATGTTCACTAGTGAGCTTTCAGAGAAGGGGAAGCCG...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAAACCGTCTCTTGCGAGTaGTACTTGGTAAAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLELPLYLEKVFLLLRGKTVSCE*YLVKSS Trigger: GGAGCTTTTTACCAAGTATCACTCGCAAGAGACGGT...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGAACCGTCTCTTGCGAGTaGTACTTGGTAAAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGTVSCE*YLVKSS Trigger: GGAGCTTTTTACCAAGTATCACTCGCAAGAGACGGT...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAACGCTCCTTCTTGGCATaGTTCACCCAGTTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: WLELPLYLEKVFLLLRGKRSFLA*FTQLIT Trigger: TGTTATCAACTGGGTGAAGCATGCCAAGAAGGAGCG...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGAATTCCCATCGTATCCTaGAATTGCATAGAGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGIPIVS*NCIESP Trigger: GGGAGACTCTATGCAATTGCAGGATACGATGGGAAT...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCTTGGCCTCTCAAATTTTAACAGTGATAGTGTTTTCCTACAGCAAGGAGTAAACTACAGCGGATaGAAGGCTCAGCATCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLGLSNFNSDSVFLQQGVNYSG*KAQHQL Trigger: TAATTGATGCTGAGCCTTTCATCCGCTGTAGTTTAC...TCCTTGCTGTAGGAAAACACTATCACTGTTAAAATTTGAGAGGCCAAGAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAACATCAACTAGATCTCTaGATTGTAAACTACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLELPLYLEKVFLLLRGKHQLDL*IVNYSG Trigger: TCCGCTGTAGTTTACAATGCAGAGATCTAGTTGATG...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAATTGTCCAGGAATCAGTaGGAATGTTATAAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLILTFSTVNLSSLQCQLSRNQ*ECYKLQ Trigger: TTGAAGCTTATAACATTCGCACTGATTCCTGGACAA...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027725.11 ENSMUST00000116528.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAATTGTCCAGGAATCAGTaGGAATGTTATAAGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WLELPLYLEKVFLLLRGKLSRNQ*ECYKQN Trigger: GTTCTGCTTATAACATTCGCACTGATTCCTGGACAA...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112232.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGCCATGATCTGGTTTCCCACATCCAAACGTGCATTCTCTTCCCTGGAGTGCAGGGAGCAGTTCTaGAACATTCTCCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRAMIWFPTSKRAFSSLECREQF*NILHCH Trigger: GTGACAGTGGAGAATGTTCAAGAACTGCTCCCTGCA...CTCCAGGGAAGAGAATGCACGTTTGGATGTGGGAAACCAGATCATGGCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR CAA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATACCAGAAGCACTTCATaGGCTCCTAGCCGGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VIVFSYSKELWWLELPLYTRSTS*APSRAL Trigger: AAGGGCCCGGCTAGGAGCCAATGAAGTGCTTCTGGT...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR CAA 90 bp | GTGATAGTGTTTTCCTACAGCAAGGAACTGTGGTGGCTTGAGCTACCTCTGTATTGCAGGGAGCAGTTCTaGAACATTCTCCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VIVFSYSKELWWLELPLYCREQF*NILHCH Trigger: GTGACAGTGGAGAATGTTCAAGAACTGCTCCCTGCA...ATACAGAGGTAGCTCAAGCCACCACAGTTCCTTGCTGTAGGAAAACACTATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGAGCTACCTCTGTATTTAGAAAAGGTATTTTTGCTTCTGAGAGGGAAAACCAGAAGCACTTCATaGGCTCCTAGCCGGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLELPLYLEKVFLLLRGKTRSTS*APSRAL Trigger: AAGGGCCCGGCTAGGAGCCAATGAAGTGCTTCTGGT...TTTCCCTCTCAGAAGCAAAAATACCTTTTCTAAATACAGAGGTAGCTCAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTCTTATTCTAACCTTTTCCACTGTTAATCTCTCAAGTCTCCAGTGCCAATGCAGGGAGCAGTTCTaGAACATTCTCCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASLILTFSTVNLSSLQCQCREQF*NILHCH Trigger: GTGACAGTGGAGAATGTTCAAGAACTGCTCCCTGCA...TTGGCACTGGAGACTTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||
| CDS CCA 72 bp | AGCCATCATATCCTCCTAGACAATAGATTATTCCGCTaGCCACTACTAGTCCTGCGCCCTCTCGAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SHHILLDNRLFR*PLLVLRPLELS Trigger: AGACAGCTCGAGAGGGCGCAGGACTAGTAGTGGCCAGCGGAATAATCTATTGTCTAGGAGGATATGATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027725.11 ENSMUST00000112232.8 ENSMUST00000116528.2 |
||