Pregenerated sensors for KLHL11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048732Ensembl transcript IDs: ENSMUST00000056665.4
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCCGTGCACGCTGCCGGTaGTCACTCGGATGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFRARCR*SLGCGR Trigger: CCGGCCGCATCCGAGTGAGCACCGGCAGCGTGCACG...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCTTCGGGTCCGGGCTCTaGGCTCCACTTGCGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCFGSGL*APLAHL Trigger: GAGATGCGCAAGTGGAGCTCAGAGCCCGGACCCGAA...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCGCTCTGAGCTCCACTTaGGCATCTCCACCCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSALSST*ASPPGP Trigger: CGGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGC...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCGCACCTCGTGCACGCTaGCGGTGCTCACTCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSAPRAR*RCSLGC Trigger: GCATCCGAGTGAGCACCGGCAGCGTGCACGAGGTGC...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCGGCAAGCAGTGGCCCTaGAGCGGGGCTGAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSGKQWP*SGAEAL Trigger: CAATGCCTCAGCCCCGCTGCAGGGCCACTGCTTGCC...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTGAAGTCCTCGGCCTCTaGGCCCGGATCGCTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFEVLGL*ARIAPA Trigger: GGCGGGAGCGATCCGGGCCCAGAGGCCGAGGACTTC...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCCGCCGAAGCACAGGGTaGTGTCGCAGAACAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCRRSTG*CRRTGL Trigger: AAGGCCTGTTCTGCGACATCACCCTGTGCTTCGGCG...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTGCCCTGCAGCGGGGCTaGGGCATTGGAGGAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFALQRG*GIGGRS Trigger: GCTCCTTCCTCCAATGCCTCAGCCCCGCTGCAGGGC...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGACCGGTAAGGGATCCTaGCATGGCAAGCAGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: HPRLTEQGEQFSAANAGETGKGS*HGKQWP Trigger: GGGCCACTGCTTGCCATGTCAGGATCCCTTACCGGT...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCCGCCGCTGCTCGTTCTaGCGCCAGGACAACTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFRRCSF*RQDNSE Trigger: CTCCGAGTTGTCCTGGCGGCAGAACGAGCAGCGGCG...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCTCTGCTCTGAGCGCATaGCTCTCCACTGCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCSALSA*LSTASA Trigger: GGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGA...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCGACAACTCGGAGCAGTaGGTGCTGCACTCGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSDNSEQ*VLHSKS Trigger: GGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTC...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTTCGCAGAACAGGCCTTaGCGCCGCTGCTCGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFSQNRP*RRCSFC Trigger: GCAGAACGAGCAGCGGCGTCAAGGCCTGTTCTGCGA...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTCACGAAGTCTACCGTaGCACTGCCTCGGACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSSRSLP*HCLGPQ Trigger: CTGAGGTCCGAGGCAGTGGCACGGTAGACTTCGTGA...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCCGGTGCTCACTCGGATaGGGCCGGTGTACATGTACT | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSRCSLG*GRCTCT Trigger: AGTACATGTACACCGGCCGCATCCGAGTGAGCACCG...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCCGCATGCCTCTCCACTaGTTCTGCCACCAGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFRMPLH*FCHQLD Trigger: GTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCG...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCCGCATGTTCAGGGCGTaGCGATGTATCTCTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCRMFRA*RCISCI Trigger: GATGCAAGAGATACATCGGCACGCCCTGAACATGCG...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCCTTGCATCTGTCGGATaGGGTCCTTCTGCCACATTA | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCLASVG*GPSATL Trigger: TAATGTGGCAGAAGGACCGCATCCGACAGATGCAAG...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCCAAACCCTGGTTCCATaGAGCCAGCAACATACACGT | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCQTLVP*SQQHTR Trigger: ACGTGTATGTTGCTGGCTCCATGGAACCAGGGTTTG...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGATGTGGGCTAAGCTATaGATGGCCACACAATTCGAG | + |
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Preference number: 4 (lower is better) Translates to: HPRLTEQGEQFSAANAGEMWAKL*MATQFE Trigger: CTCGAATTGTGTGGCCATTCATAGCTTAGCCCACAT...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCGAATGTGGGGCAGATTaGCCCACCTATCCTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSECGAD*PTYPHQ Trigger: TTGATGAGGATAGGTGGGTCAATCTGCCCCACATTC...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCCTCTCCACTGCTTCTaGCACCAGCTTGACACAAAC | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFPLHCF*HQLDTN Trigger: GTTTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGG...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCACTTGTGAAGTGGGCTaGTGCAATGTGCCAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFTCEVG*CNVPDC Trigger: ACAGTCTGGCACATTGCAGCAGCCCACTTCACAAGT...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCGCTGACTCTAAGTTGTaGCATTTATCAAGCTCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCADSKL*HLSSSG Trigger: TCCCGAGCTTGATAAATGGCACAACTTAGAGTCAGC...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTTGCCGATGTATCTCTTaGATCTGTCGGATGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFCRCIS*ICRMRS Trigger: GGACCGCATCCGACAGATGCAAGAGATACATCGGCA...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACACCGAGAGTAAGGGCGTaGAGTACTCGGTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTPRVRA*STRWQR Trigger: CCGCTGCCACCGAGTACTTCACGCCCTTACTCTCGG...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCAAAGCCAGTCCCGAATaGGATGGAAAGGTAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSKASPE*DGKVKC Trigger: ACACTTTACCTTTCCATCTCATTCGGGACTGGCTTT...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCCTTCTGCCACCAGCTTaGCACAAACTTCATTATTGG | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSLLPPA*HKLHYW Trigger: CCAATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAG...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCTATACAGCTTCCCTTTaGCTTCTGTTAGCCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCYTASL*LLLAQK Trigger: CTTTTGGGCTAACAGAAGTCAAAGGGAAGCTGTATA...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGACTCTTGGGACAGCATaGTGCTGTCTGATAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: HPRLTEQGEQFSAANAGETLGTA*CCLIKV Trigger: AACTTTTATCAGACAGCATCATGCTGTCCCAAGAGT...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACAAGCTCCAGCACCTCGTaGACGCTGCCGGTGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTSSSTS*TLPVLT Trigger: AGTGAGCACCGGCAGCGTGCACGAGGTGCTGGAGCT...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCTCTTCTGCATTTCTCTaGACCCACTTCAAAACTGTT | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCSSAFL*THFKTV Trigger: AACAGTTTTGAAGTGGGTTCAGAGAAATGCAGAAGA...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCTCTCCGTATCATATCTaGAGCTTTCAGAGCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFSPYHI*SFQSKL Trigger: CAGCTTGCTCTGAAAGCTGCAGATATGATACGGAGA...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTCTCTCTCTCTCTTCTaGATTTCTCTGAACCCACTT | + |
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Preference number: 4 (lower is better) Translates to: QVTVQASPPHRTGRTVFSSLSLF*ISLNPL Trigger: AAGTGGGTTCAGAGAAATGCAGAAGAGAGAGAGAGA...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTAGACTGTATATTCTCTaGTCTGAGCGCATGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFRLYIL*SERMPL Trigger: GAGAGGCATGCGCTCAGAGCAGAGAATATACAGTCT...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | GTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCCCATGTATTCAGGTTTaGGTTGTATCTTTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: VTVQASPPHRTGRTVFSCPCIQV*VVSFHS Trigger: ACTGTGGAAAGATACAACCCAAACCTGAATACATGG...GCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCCTAAGGAGTAACTCTTaGGACAGCATGATGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFLRSNS*DSMMLS Trigger: AGACAGCATCATGCTGTCCCAAGAGTTACTCCTTAG...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACAGCGGGGCTGAGGCATTaGAGGAAGGAGCATCCACCT | + |
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Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTAGLRH*RKEHPP Trigger: AGGTGGATGCTCCTTCCTCCAATGCCTCAGCCCCGC...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCACAAACTTCATTATTaGCCACTAGCCGCTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFHKLHY*PLAALV Trigger: AACCAGAGCGGCTAGTGGCCAATAATGAAGTTTGTG...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCCTCTGTAATAGCAAATaGCTGCTCCTTCGATGCTTA | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFLCNSK*LLLRCL Trigger: TAAGCATCGAAGGAGCAGCCATTTGCTATTACAGAG...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTGTTAGCCCAAAAGAGTaGTTTCTGGTCATCAGACTA | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFVSPKE*FLVIRL Trigger: TAGTCTGATGACCAGAAAGCACTCTTTTGGGCTAAC...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTAAAGATTCCACATCTTaGCACTGTCGAGTCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: FPSNSPGIPASQNRENSFKDSTS*HCRVSV Trigger: TACAGAGACTCGACAGTGGCAAGATGTGGAATCTTT...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCTTAAATTTTGAGGCATaGGGTATCTCTGTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FQVTVQASPPHRTGRTVFLNFEA*GISVCH Trigger: ATGGCACACAGAGATACCCCATGCCTCAAAATTTAA...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACATGGCTGCTCCTTCGATaGTTAGGACTTCTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTWLLLR*LGLLEA Trigger: TGCCTCCAGAAGTCCTAAGCATCGAAGGAGCAGCCA...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACATGGGCTGCTGCAATGTaGCAGACTGTATATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTWAAAM*QTVYSL Trigger: CAGAGAATATACAGTCTGGCACATTGCAGCAGCCCA...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACATGTGAAGTGGGCTGCTaGAATGTGCCAGACTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTCEVGC*NVPDCI Trigger: TATACAGTCTGGCACATTGCAGCAGCCCACTTCACA...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR GCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACATGGGGTATCTCTGTGTaGCATGTAAGTACCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTWGISV*HVSTGK Trigger: CTTACCGGTACTTACATGGCACACAGAGATACCCCA...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACAATCTCATCAGACACCTaGCCGGCAATTTTTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTISSDT*PAIFLT Trigger: AGTAAGAAAAATTGCCGGTCAGGTGTCTGATGAGAT...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR TCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACATGCCACATTAAATTTTaGGGCATGGGGTATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTCHIKF*GMGYLC Trigger: ACAGAGATACCCCATGCCTCAAAATTTAATGTGGCA...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CCA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACACAAAAGAGTGCTTTCTaGTCATCAGACTACAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QHTNTNQSQDCNLTKITTQKSAF*SSDYKH Trigger: ATGTTTGTAGTCTGATGACCAGAAAGCACTCTTTTG...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 90 bp | GGTGGGCACGGAACTCGCGACCTCCGGCCCCGCCGAAGCACAGGGTaGTGTCGCAGAACAGGCCTTGACGCCGCTGCTCGTTCTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGHGTRDLRPRRSTG*CRRTGLDAAARSAA Trigger: GGCGGCAGAACGAGCAGCGGCGTCAAGGCCTGTTCTGCGACATCACCCTGTGCTTCGGCGGGGCCGGAGGTCGCGAGTTCCGTGCCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | GCCGCTGCTCGTTCTGCCGCCAGGACAACTCGGAGCAGTGAGTGCTaGACTCGAAGTCCTCGGCCTCTGGGCCCGGATCGCTCCCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAARSAARTTRSSEC*TRSPRPLGPDRSRP Trigger: CGGGCGGGAGCGATCCGGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTCCTGGCGGCAGAACGAGCAGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | GACGCCGCTGCTCGTTCTGCCGCCAGGACAACTCGGAGCAGTGAGTaGTGCACTCGAAGTCCTCGGCCTCTGGGCCCGGATCGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DAAARSAARTTRSSE*CTRSPRPLGPDRSR Trigger: GCGGGAGCGATCCGGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTCCTGGCGGCAGAACGAGCAGCGGCGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | CGGCTTCCACCGTGTCAGGTTCGGGTCCGGGCTCTGAGCTCCACTTaGGCATCTCCACCCGGCCCGAGCGCGATTCCGAAAACTGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLPPCQVRVRALSST*ASPPGPSAIPKTDP Trigger: CGGGTCAGTTTTCGGAATCGCGCTCGGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGCCCGGACCCGAACCTGACACGGTGGAAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 90 bp | GGACAACTCGGAGCAGTGAGTGCTGCACTCGAAGTCCTCGGCCTCTaGGCCCGGATCGCTCCCGCCCGTGTCGACGAGGGTAGAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQLGAVSAALEVLGL*ARIAPARVDEGRDA Trigger: GGCATCTCTACCCTCGTCGACACGGGCGGGAGCGATCCGGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 90 bp | CTCCACTTGCGCATCTCCACCCGGCCCGAGCGCGATTCCGAAAACTaGCCCGAGAGTAAGGGCGTGAAGTACTCGGTGGCAGCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLRISTRPERDSEN*PESKGVKYSVAAAS Trigger: GCTGGCCGCTGCCACCGAGTACTTCACGCCCTTACTCTCGGGTCAGTTTTCGGAATCGCGCTCGGGCCGGGTGGAGATGCGCAAGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 90 bp | GTACTCGATAACGGCTTCCACCGTGTCAGGTTCGGGTCCGGGCTCTaGGCTCCACTTGCGCATCTCCACCCGGCCCGAGCGCGATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VLDNGFHRVRFGSGL*APLAHLHPARARFR Trigger: TCGGAATCGCGCTCGGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGCCCGGACCCGAACCTGACACGGTGGAAGCCGTTATCGAGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 90 bp | GCATGGGGTATCTCTGTGTGCCATGTAAGTACCGGTAAGGGATCCTaGCATGGCAAGCAGTGGCCCTGCAGCGGGGCTGAGGCATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AWGISVCHVSTGKGS*HGKQWPCSGAEALE Trigger: CTCCAATGCCTCAGCCCCGCTGCAGGGCCACTGCTTGCCATGTCAGGATCCCTTACCGGTACTTACATGGCACACAGAGATACCCCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 90 bp | GATCCTGACATGGCAAGCAGTGGCCCTGCAGCGGGGCTGAGGCATTaGAGGAAGGAGCATCCACCTCTTTCTCTCAGCACAGTATCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DPDMASSGPAAGLRH*RKEHPPLSLSTVSV Trigger: TACCGATACTGTGCTGAGAGAAAGAGGTGGATGCTCCTTCCTCCAATGCCTCAGCCCCGCTGCAGGGCCACTGCTTGCCATGTCAGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGCTCCATCTCCAGCACTaGAAAAGATGCAGCCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPRLTEQGEQFSAANAGELHLQH*KRCSRG Trigger: GCCGCGGCTGCATCTTTTCAAGTGCTGGAGATGGAG...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | CAGCATTCAATCTGGGAACTTGGCACTCTCCGCATGTTCAGGGCGTaGCGATGTATCTCTTGCATCTGTCGGATGCGGTCCTTCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QHSIWELGTLRMFRA*RCISCICRMRSFCH Trigger: GTGGCAGAAGGACCGCATCCGACAGATGCAAGAGATACATCGGCACGCCCTGAACATGCGGAGAGTGCCAAGTTCCCAGATTGAATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | TTTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTGTCGCAGAACAGGCCTaGACGCCGCTGCTCGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPSNSPGIPASQNRENSFVAEQA*TPLLVL Trigger: CAGAACGAGCAGCGGCGTCAAGGCCTGTTCTGCGAC...AAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGGTGCCGATGTATCTCTaGCATCTGTCGGATGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPRLTEQGEQFSAANAGEVPMYL*HLSDAV Trigger: GACCGCATCCGACAGATGCAAGAGATACATCGGCAC...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | TTTAAACGAATTAATAAGAATCTGTCGGCCAGCTCCAGCACCTCGTaGACGCTGCCGGTGCTCACTCGGATGCGGCCGGTGTACATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FKRINKNLSASSSTS*TLPVLTRMRPVYMY Trigger: GTACATGTACACCGGCCGCATCCGAGTGAGCACCGGCAGCGTGCACGAGGTGCTGGAGCTGGCCGACAGATTCTTATTAATTCGTTTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACAGGCTCTGAGCTCCACTaGCGCATCTCCACCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QHTNTNQSQDCNLTKITTGSELH*RISTRP Trigger: GGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGCC...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGACACAAACTTCATTATaGGCCACTAGCCGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HPRLTEQGEQFSAANAGETQTSL*ATSRSG Trigger: ACCAGAGCGGCTAGTGGCCAATAATGAAGTTTGTGT...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCAAGCCAGGGCTAAAATaGCCGTGTCCTCCAATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QVTVQASPPHRTGRTVFSKPGLK*PCPPML Trigger: TAGCATTGGAGGACACGGCAATTTTAGCCCTGGCTT...GCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | GGCTGCTGCAATGTGCCAGACTGTATATTCTCTGCTCTGAGCGCATaGCTCTCCACTGCTTCTGCCACCAGCTTGACACAAACTTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: GCCNVPDCIFSALSA*LSTASATSLTQTSL Trigger: TAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAATATACAGTCTGGCACATTGCAGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | CCCTGGTTCCATGGAGCCAGCAACATACACGTAGGACTCTGTAATTaGGACGGCATGTCCATCAAGGTGGTTATGAATGTGGGGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: PWFHGASNIHVGLCN*DGMSIKVVMNVGQI Trigger: AATCTGCCCCACATTCATAACCACCTTGATGGACATGCCGTCGCAATTACAGAGTCCTACGTGTATGTTGCTGGCTCCATGGAACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | TCCGCATGTTCAGGGCGTGCCGATGTATCTCTTGCATCTGTCGGATaGGGTCCTTCTGCCACATTAAATTTTGAGGCATGGGGTATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SACSGRADVSLASVG*GPSATLNFEAWGIS Trigger: AGAGATACCCCATGCCTCAAAATTTAATGTGGCAGAAGGACCGCATCCGACAGATGCAAGAGATACATCGGCACGCCCTGAACATGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAGTAACAGTCCAGGCATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCGGTGCTGACTCTAAGTaGTGCCATTTATCAAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FQVTVQASPPHRTGRTVFGADSK*CHLSSS Trigger: CGAGCTTGATAAATGGCACAACTTAGAGTCAGCACC...GAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATGCCTGGACTGTTACTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 90 bp | TGCGGGCAGCAATGTACACAAACCGGTCCTCAATGGCTAATGCTTTaGCATCTCGCAGAATCTTTGGTGCTGACTCTAAGTTGTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CGQQCTQTGPQWLML*HLAESLVLTLSCAI Trigger: AATGGCACAACTTAGAGTCAGCACCAAAGATTCTGCGAGATGTCAAAGCATTAGCCATTGAGGACCGGTTTGTGTACATTGCTGCCCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CATCCCCGCCTCACAGAACAGGGAGAACAGTTTTCAGCTGCAAACGCTGGTGAGGTATTCAGGTTTGGGTaGTATCTTTCCACAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HPRLTEQGEQFSAANAGEVFRFG*YLSTVL Trigger: TAAAACTGTGGAAAGATACAACCCAAACCTGAATAC...CTCACCAGCGTTTGCAGCTGAAAACTGTTCTCCCTGTTCTGTGAGGCGGGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 90 bp | TTGCGACGGCATGTCCATCAAGGTGGTTATGAATGTGGGGCAGATTaGCCCACCTATCCTCATCAACAAAATATCCCACACATTCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRRHVHQGGYECGAD*PTYPHQQNIPHIHL Trigger: TAAGTGAATGTGTGGGATATTTTGTTGATGAGGATAGGTGGGTCAATCTGCCCCACATTCATAACCACCTTGATGGACATGCCGTCGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 90 bp | TGTATTCAGGTTTGGGTTGTATCTTTCCACAGTTTTAGCAAACCCTaGTTCCATGGAGCCAGCAACATACACGTAGGACTCTGTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: CIQVWVVSFHSFSKP*FHGASNIHVGLCNC Trigger: GCAATTACAGAGTCCTACGTGTATGTTGCTGGCTCCATGGAACCAGGGTTTGCTAAAACTGTGGAAAGATACAACCCAAACCTGAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 90 bp | CCAATGCTATACAGCTTCCCTTTGACTTCTGTTAGCCCAAAAGAGTaGTTTCTGGTCATCAGACTACAAACATGTTCCCATGTATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PMLYSFPLTSVSPKE*FLVIRLQTCSHVFR Trigger: CCTGAATACATGGGAACATGTTTGTAGTCTGATGACCAGAAAGCACTCTTTTGGGCTAACAGAAGTCAAAGGGAAGCTGTATAGCATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS-3UTR CAA 90 bp | CAGCACACAAACACAAACCAAAGTCAGGACTGCAACCTAACAAAAATTACCACAGCTTCTGCCACCAGCTaGACACAAACTTCATTATTG | + |
|
Preference number: 5 (lower is better) Translates to: QHTNTNQSQDCNLTKITTASATS*TQTSLL Trigger: CAATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGC...TGTGGTAATTTTTGTTAGGTTGCAGTCCTGACTTTGGTTTGTGTTTGTGTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 72 bp | GGAGCAGTGAGTGCTGCACTCGAAGTCCTCGGCCTCTaGGCCCGGATCGCTCCCGCCCGTGTCGACGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAVSAALEVLGL*ARIAPARVDEG Trigger: ACCCTCGTCGACACGGGCGGGAGCGATCCGGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | GGAACTCGCGACCTCCGGCCCCGCCGAAGCACAGGGTaGTGTCGCAGAACAGGCCTTGACGCCGCTGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GTRDLRPRRSTG*CRRTGLDAAAR Trigger: ACGAGCAGCGGCGTCAAGGCCTGTTCTGCGACATCACCCTGTGCTTCGGCGGGGCCGGAGGTCGCGAGTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | AACGGCTTCCACCGTGTCAGGTTCGGGTCCGGGCTCTaGGCTCCACTTGCGCATCTCCACCCGGCCCGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NGFHRVRFGSGL*APLAHLHPARA Trigger: CGCTCGGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGCCCGGACCCGAACCTGACACGGTGGAAGCCGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | CGCTGCTCGTTCTGCCGCCAGGACAACTCGGAGCAGTaGGTGCTGCACTCGAAGTCCTCGGCCTCTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RCSFCRQDNSEQ*VLHSKSSASGP Trigger: GGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTCCTGGCGGCAGAACGAGCAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | CGTTCTGCCGCCAGGACAACTCGGAGCAGTGAGTGCTaGACTCGAAGTCCTCGGCCTCTGGGCCCGGATCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSAARTTRSSEC*TRSPRPLGPDR Trigger: GCGATCCGGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTCCTGGCGGCAGAACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | CCGTGTCAGGTTCGGGTCCGGGCTCTGAGCTCCACTTaGGCATCTCCACCCGGCCCGAGCGCGATTCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PCQVRVRALSST*ASPPGPSAIPK Trigger: TTTCGGAATCGCGCTCGGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGCCCGGACCCGAACCTGACACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 72 bp | ACCGTGTCAGGTTCGGGTCCGGGCTCTGAGCTCCACTaGCGCATCTCCACCCGGCCCGAGCGCGATTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSGSGPGSELH*RISTRPERDSE Trigger: TTCGGAATCGCGCTCGGGCCGGGTGGAGATGCGCAAGTGGAGCTCAGAGCCCGGACCCGAACCTGACACGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | GCTCGTTCTGCCGCCAGGACAACTCGGAGCAGTGAGTaGTGCACTCGAAGTCCTCGGCCTCTGGGCCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARSAARTTRSSE*CTRSPRPLGPD Trigger: ATCCGGGCCCAGAGGCCGAGGACTTCGAGTGCAGCACTCACTGCTCCGAGTTGTCCTGGCGGCAGAACGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | TGTCGGCCAGCTCCAGCACCTCGTGCACGCTGCCGGTaGTCACTCGGATGCGGCCGGTGTACATGTACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: CRPAPAPRARCR*SLGCGRCTCTR Trigger: TCGAGTACATGTACACCGGCCGCATCCGAGTGAGCACCGGCAGCGTGCACGAGGTGCTGGAGCTGGCCGACA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | AGAATCTGTCGGCCAGCTCCAGCACCTCGTGCACGCTaGCGGTGCTCACTCGGATGCGGCCGGTGTACATGT | + |
|
Preference number: 6 (lower is better) Translates to: RICRPAPAPRAR*RCSLGCGRCTC Trigger: ACATGTACACCGGCCGCATCCGAGTGAGCACCGGCAGCGTGCACGAGGTGCTGGAGCTGGCCGACAGATTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | CGCATCTCCACCCGGCCCGAGCGCGATTCCGAAAACTaGCCCGAGAGTAAGGGCGTGAAGTACTCGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RISTRPERDSEN*PESKGVKYSVA Trigger: TGCCACCGAGTACTTCACGCCCTTACTCTCGGGTCAGTTTTCGGAATCGCGCTCGGGCCGGGTGGAGATGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | ATTAATAAGAATCTGTCGGCCAGCTCCAGCACCTCGTaGACGCTGCCGGTGCTCACTCGGATGCGGCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: INKNLSASSSTS*TLPVLTRMRPV Trigger: CACCGGCCGCATCCGAGTGAGCACCGGCAGCGTGCACGAGGTGCTGGAGCTGGCCGACAGATTCTTATTAAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | CCTTCAGTCCATCCTCAGTGTCCCGGTCCACGGGCGTaGGGGCAGCAATGTACACAAACCGGTCCTCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: PSVHPQCPGPRA*GQQCTQTGPQW Trigger: CCATTGAGGACCGGTTTGTGTACATTGCTGCCCGCACGCCCGTGGACCGGGACACTGAGGATGGACTGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 72 bp | ATGGCAAGCAGTGGCCCTGCAGCGGGGCTGAGGCATTaGAGGAAGGAGCATCCACCTCTTTCTCTCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: MASSGPAAGLRH*RKEHPPLSLST Trigger: TGTGCTGAGAGAAAGAGGTGGATGCTCCTTCCTCCAATGCCTCAGCCCCGCTGCAGGGCCACTGCTTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | ATCTCTGTGTGCCATGTAAGTACCGGTAAGGGATCCTaGCATGGCAAGCAGTGGCCCTGCAGCGGGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISVCHVSTGKGS*HGKQWPCSGAE Trigger: CTCAGCCCCGCTGCAGGGCCACTGCTTGCCATGTCAGGATCCCTTACCGGTACTTACATGGCACACAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | ATCTGGGAACTTGGCACTCTCCGCATGTTCAGGGCGTaGCGATGTATCTCTTGCATCTGTCGGATGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: IWELGTLRMFRA*RCISCICRMRS Trigger: GGACCGCATCCGACAGATGCAAGAGATACATCGGCACGCCCTGAACATGCGGAGAGTGCCAAGTTCCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | GCTGCTGCAATGTGCCAGACTGTATATTCTCTGCTCTaGGCGCATGCCTCTCCACTGCTTCTGCCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AAAMCQTVYSLL*AHASPLLLPPA Trigger: AGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAATATACAGTCTGGCACATTGCAGCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | AGTGGGCTGCTGCAATGTGCCAGACTGTATATTCTCTaGTCTGAGCGCATGCCTCTCCACTGCTTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SGLLQCARLYIL*SERMPLHCFCH Trigger: GTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAATATACAGTCTGGCACATTGCAGCAGCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 72 bp | CTGAGCGCATGCCTCTCCACTGCTTCTGCCACCAGCTaGACACAAACTTCATTATTGGCCACTAGCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSACLSTASATS*TQTSLLATSRS Trigger: AGAGCGGCTAGTGGCCAATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | ACTCTCCGCATGTTCAGGGCGTGCCGATGTATCTCTTaGATCTGTCGGATGCGGTCCTTCTGCCACATTAAA | + |
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Preference number: 6 (lower is better) Translates to: TLRMFRACRCIS*ICRMRSFCHIK Trigger: TTTAATGTGGCAGAAGGACCGCATCCGACAGATGCAAGAGATACATCGGCACGCCCTGAACATGCGGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 90 bp | TTCTCTGCTCTGAGCGCATGCCTCTCCACTGCTTCTGCCACCAGCTaGACACAAACTTCATTATTGGCCACTAGCCGCTCTGGTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: FSALSACLSTASATS*TQTSLLATSRSGLT Trigger: TGTCAAACCAGAGCGGCTAGTGGCCAATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | ATTCTCTGCTCTGAGCGCATGCCTCTCCACTGCTTCTaGCACCAGCTTGACACAAACTTCATTATTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ILCSERMPLHCF*HQLDTNFIIGH Trigger: GTGGCCAATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | AATGTGCCAGACTGTATATTCTCTGCTCTGAGCGCATaGCTCTCCACTGCTTCTGCCACCAGCTTGACACAA | + |
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Preference number: 6 (lower is better) Translates to: NVPDCIFSALSA*LSTASATSLTQ Trigger: TTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAATATACAGTCTGGCACATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | TCAGGGCGTGCCGATGTATCTCTTGCATCTGTCGGATaGGGTCCTTCTGCCACATTAAATTTTGAGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SGRADVSLASVG*GPSATLNFEAW Trigger: CCATGCCTCAAAATTTAATGTGGCAGAAGGACCGCATCCGACAGATGCAAGAGATACATCGGCACGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 72 bp | ACTGCTTCTGCCACCAGCTTGACACAAACTTCATTATaGGCCACTAGCCGCTCTGGTTTGACATGCCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: TASATSLTQTSL*ATSRSGLTCRV Trigger: TACACGGCATGTCAAACCAGAGCGGCTAGTGGCCAATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 90 bp | GTGCGGGCAGCAATGTACACAAACCGGTCCTCAATGGCTAATGCTTaGACATCTCGCAGAATCTTTGGTGCTGACTCTAAGTTGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VRAAMYTNRSSMANA*TSRRIFGADSKLCH Trigger: ATGGCACAACTTAGAGTCAGCACCAAAGATTCTGCGAGATGTCAAAGCATTAGCCATTGAGGACCGGTTTGTGTACATTGCTGCCCGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | TCTGTAATTGCGACGGCATGTCCATCAAGGTGGTTATaGATGTGGGGCAGATTGACCCACCTATCCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SVIATACPSRWL*MWGRLTHLSSS Trigger: TGATGAGGATAGGTGGGTCAATCTGCCCCACATTCATAACCACCTTGATGGACATGCCGTCGCAATTACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | CATGGAGCCAGCAACATACACGTAGGACTCTGTAATTaGGACGGCATGTCCATCAAGGTGGTTATGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: HGASNIHVGLCN*DGMSIKVVMNV Trigger: CACATTCATAACCACCTTGATGGACATGCCGTCGCAATTACAGAGTCCTACGTGTATGTTGCTGGCTCCATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | CTGTATATTCTCTGCTCTGAGCGCATGCCTCTCCACTaGTTCTGCCACCAGCTTGACACAAACTTCATTATT | + |
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Preference number: 6 (lower is better) Translates to: LYILCSERMPLH*FCHQLDTNFII Trigger: AATAATGAAGTTTGTGTCAAGCTGGTGGCAGAAGCAGTGGAGAGGCATGCGCTCAGAGCAGAGAATATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 72 bp | TTTGTCCATAGCGAGGTAACAGTGAGACTTGTGAAGTaGGCTGCTGCAATGTGCCAGACTGTATATTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FVHSEVTVRLVK*AAAMCQTVYSL Trigger: CAGAGAATATACAGTCTGGCACATTGCAGCAGCCCACTTCACAAGTCTCACTGTTACCTCGCTATGGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CCA 72 bp | GTTTGGGTTGTATCTTTCCACAGTTTTAGCAAACCCTaGTTCCATGGAGCCAGCAACATACACGTAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: VWVVSFHSFSKP*FHGASNIHVGL Trigger: GAGTCCTACGTGTATGTTGCTGGCTCCATGGAACCAGGGTTTGCTAAAACTGTGGAAAGATACAACCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | AATTGCCGTGTCCTCCAATGCTATACAGCTTCCCTTTaGCTTCTGTTAGCCCAAAAGAGTGCTTTCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: NCRVLQCYTASL*LLLAQKSAFWS Trigger: TGACCAGAAAGCACTCTTTTGGGCTAACAGAAGTCAAAGGGAAGCTGTATAGCATTGGAGGACACGGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | CATCATCTCTGTAATAGCAAATGGCTGCTCCTTCGATaGTTAGGACTTCTGGAGGCAAGCTTTCAAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: HHLCNSKWLLLR*LGLLEASFQGS Trigger: AGATCCTTGAAAGCTTGCCTCCAGAAGTCCTAAGCATCGAAGGAGCAGCCATTTGCTATTACAGAGATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 72 bp | GCAATGTACACAAACCGGTCCTCAATGGCTAATGCTTaGACATCTCGCAGAATCTTTGGTGCTGACTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: AMYTNRSSMANA*TSRRIFGADSK Trigger: CTTAGAGTCAGCACCAAAGATTCTGCGAGATGTCAAAGCATTAGCCATTGAGGACCGGTTTGTGTACATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS CAA 90 bp | CTGGTCATCAGACTACAAACATGTTCCCATGTATTCAGGTTTGGGTaGTATCTTTCCACAGTTTTAGCAAACCCTGGTTCCATGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVIRLQTCSHVFRFG*YLSTVLANPGSMEP Trigger: TGGCTCCATGGAACCAGGGTTTGCTAAAACTGTGGAAAGATACAACCCAAACCTGAATACATGGGAACATGTTTGTAGTCTGATGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | CAATGTACACAAACCGGTCCTCAATGGCTAATGCTTTaGCATCTCGCAGAATCTTTGGTGCTGACTCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: QCTQTGPQWLML*HLAESLVLTLS Trigger: ACTTAGAGTCAGCACCAAAGATTCTGCGAGATGTCAAAGCATTAGCCATTGAGGACCGGTTTGTGTACATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS TCA 72 bp | GATGGAAAGGTAAAGTGTAAAATTCCTCATCCTGAATaGCTTTATAGAAATTTCTCCGTATCATATCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: DGKVKCKIPHPE*LYRNFSVSYLQ Trigger: CTGCAGATATGATACGGAGAAATTTCTATAAAGTCATTCAGGATGAGGAATTTTACACTTTACCTTTCCATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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| CDS GCA 72 bp | TTTAAAAAGCTCTTCAAAGTATCTCTCTCTCTCTTCTaGATTTCTCTGAACCCACTTCAAAACTGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FKKLFKVSLSLF*ISLNPLQNCFK Trigger: TTTGAAACAGTTTTGAAGTGGGTTCAGAGAAATGCAGAAGAGAGAGAGAGATACTTTGAAGAGCTTTTTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056665.4 |
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