Pregenerated sensors for KLHL10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001558Ensembl transcript IDs: ENSMUST00000001599.4, ENSMUST00000107395.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTGTTGTGGCGCTCGCATCGCTCCGCTGCTCATGCATGGGGGCAATaGGTGTCCATTGGTTGGTCTCTGGCTCGTACCGTTCAGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: VLWRSHRSAAHAWGQ*VSIGWSLARTVQQC Trigger: ACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGGAGCGATGCGAGCGCCACAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 90 bp | CTCGCATCGCTCCGCTGCTCATGCATGGGGGCAATGAGTGTCCATTaGTTGGTCTCTGGCTCGTACCGTTCAGCAGTGTTGAGACGCACG | + |
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Preference number: 5 (lower is better) Translates to: LASLRCSCMGAMSVH*LVSGSYRSAVLRRT Trigger: CGTGCGTCTCAACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGGAGCGATGCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 90 bp | GGCTCGAGGACTTTCTTCCTCACACGTGACATTCACCCATCTGTCTaGTCGAGCATCGTATGCCTCAATGGCATTGGTGGGGCTCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: GSRTFFLTRDIHPSV*SSIVCLNGIGGAPA Trigger: GGCGGGAGCCCCACCAATGCCATTGAGGCATACGATGCTCGAGCAGACAGATGGGTGAATGTCACGTGTGAGGAAGAAAGTCCTCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 90 bp | TTCCTCACACGTGACATTCACCCATCTGTCTGCTCGAGCATCGTATaGCTCAATGGCATTGGTGGGGCTCCCGCCACTCCAGCCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: FLTRDIHPSVCSSIV*LNGIGGAPATPATN Trigger: ATTGGTGGCTGGAGTGGCGGGAGCCCCACCAATGCCATTGAGGCATACGATGCTCGAGCAGACAGATGGGTGAATGTCACGTGTGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 90 bp | AGTGGGGATCGTGCGCCAAGTATTAGCCACTGGGCTGTAGGCTTCTaGACTCCTCAGTCGATTGGCTCCATCAAAGCCACCCACTGCGTA | + |
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Preference number: 5 (lower is better) Translates to: SGDRAPSISHWAVGF*TPQSIGSIKATHCV Trigger: TACGCAGTGGGTGGCTTTGATGGAGCCAATCGACTGAGGAGTGCAGAAGCCTACAGCCCAGTGGCTAATACTTGGCGCACGATCCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS TCA 90 bp | AGTAGGCTGCCCCGTGGTAGGCTCGAGGACTTTCTTCCTCACACGTaGCATTCACCCATCTGTCTGCTCGAGCATCGTATGCCTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: SRLPRGRLEDFLPHT*HSPICLLEHRMPQW Trigger: CCATTGAGGCATACGATGCTCGAGCAGACAGATGGGTGAATGTCACGTGTGAGGAAGAAAGTCCTCGAGCCTACCACGGGGCAGCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 90 bp | CCCCAACATTGGCTAGCCCTGGTACCACGCAGCAGCTCAGAGCACTaGGGTATATGCTCATGTCATGAGCGTCATACCACTCATCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: PQHWLALVPRSSSEH*GICSCHERHTTHRS Trigger: AGACCGATGAGTGGTATGACGCTCATGACATGAGCATATACCGCAGTGCTCTGAGCTGCTGCGTGGTACCAGGGCTAGCCAATGTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 90 bp | CCGCTGCTCATGCATGGGGGCAATGAGTGTCCATTGGTTGGTCTCTaGCTCGTACCGTTCAGCAGTGTTGAGACGCACGTAGCCATCAAA | + |
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Preference number: 5 (lower is better) Translates to: PLLMHGGNECPLVGL*LVPFSSVETHVAIK Trigger: TTTGATGGCTACGTGCGTCTCAACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS TCA 90 bp | ACATGTAGGCCTTCTGCCTCAGCTCGGGGCAGTAGTAGTAGTCCGTaGACTTGCAGATGCCGATACAGTTATCCAGACACAGCTCCGACT | + |
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Preference number: 5 (lower is better) Translates to: TCRPSASARGSSSSP*TCRCRYSYPDTAPT Trigger: AGTCGGAGCTGTGTCTGGATAACTGTATCGGCATCTGCAAGTTCACGGACTACTACTACTGCCCCGAGCTGAGGCAGAAGGCCTACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS TCA 90 bp | GAAACTCTGCCGAGACTTTCACCATCTCCTCGAAGTTGTGCAGGATaGACATGTAGGCCTTCTGCCTCAGCTCGGGGCAGTAGTAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: ETLPRLSPSPRSCAG*TCRPSASARGSSSS Trigger: ACTACTACTACTGCCCCGAGCTGAGGCAGAAGGCCTACATGTTCATCCTGCACAACTTCGAGGAGATGGTGAAAGTCTCGGCAGAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS GCA 90 bp | TGGCTAGCCCTGGTACCACGCAGCAGCTCAGAGCACTGCGGTATATaGTCATGTCATGAGCGTCATACCACTCATCGGTCTTTTCATCAT | + |
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Preference number: 5 (lower is better) Translates to: WLALVPRSSSEHCGI*SCHERHTTHRSFHH Trigger: ATGATGAAAAGACCGATGAGTGGTATGACGCTCATGACATGAGCATATACCGCAGTGCTCTGAGCTGCTGCGTGGTACCAGGGCTAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 90 bp | ACGAGGGTTAAACATAGTGGGGATCGTGCGCCAAGTATTAGCCACTaGGCTGTAGGCTTCTGCACTCCTCAGTCGATTGGCTCCATCAAA | + |
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Preference number: 5 (lower is better) Translates to: TRVKHSGDRAPSISH*AVGFCTPQSIGSIK Trigger: TTTGATGGAGCCAATCGACTGAGGAGTGCAGAAGCCTACAGCCCAGTGGCTAATACTTGGCGCACGATCCCCACTATGTTTAACCCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS TCA 90 bp | TTGAGGAACTCACAGCAACCCCTAACGATGCCCATGATGTTAAACTaGTCAGCAGCGGCCAGCAGCTTCTCCACATTGTCAGGGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: LRNSQQPLTMPMMLN*SAAASSFSTLSGVI Trigger: TATCACCCCTGACAATGTGGAGAAGCTGCTGGCCGCTGCTGATCAGTTTAACATCATGGGCATCGTTAGGGGTTGCTGTGAGTTCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS GCA 90 bp | CTCAATGATGTCCTTGAGCTCAGTGACAGAGAGCTCCAGAAACTCTaGCGAGACTTTCACCATCTCCTCGAAGTTGTGCAGGATGAACAT | + |
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Preference number: 5 (lower is better) Translates to: LNDVLELSDRELQKL*RDFHHLLEVVQDEH Trigger: ATGTTCATCCTGCACAACTTCGAGGAGATGGTGAAAGTCTCGGCAGAGTTTCTGGAGCTCTCTGTCACTGAGCTCAAGGACATCATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS TCA 72 bp | CGCTCGCATCGCTCCGCTGCTCATGCATGGGGGCAATaGGTGTCCATTGGTTGGTCTCTGGCTCGTACCGTT | + |
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Preference number: 6 (lower is better) Translates to: RSHRSAAHAWGQ*VSIGWSLARTV Trigger: AACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGGAGCGATGCGAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 72 bp | TCACCCATCTGTCTGCTCGAGCATCGTATGCCTCAATaGCATTGGTGGGGCTCCCGCCACTCCAGCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: SPICLLEHRMPQ*HWWGSRHSSHQ Trigger: TTGGTGGCTGGAGTGGCGGGAGCCCCACCAATGCCATTGAGGCATACGATGCTCGAGCAGACAGATGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 72 bp | CATCTGTCTGCTCGAGCATCGTATGCCTCAATGGCATaGGTGGGGCTCCCGCCACTCCAGCCACCAATAGCG | + |
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Preference number: 6 (lower is better) Translates to: HLSARASYASMA*VGLPPLQPPIA Trigger: CGCTATTGGTGGCTGGAGTGGCGGGAGCCCCACCAATGCCATTGAGGCATACGATGCTCGAGCAGACAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | GCTCGCATCGCTCCGCTGCTCATGCATGGGGGCAATGAGTGTCCATaGGTTGGTCTCTGGCTCGTACCGTTCAGCAGTGTTGAGACGCAC | + |
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Preference number: 6 (lower is better) Translates to: ARIAPLLMHGGNECP*VGLWLVPFSSVETH Trigger: GTGCGTCTCAACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGGAGCGATGCGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 72 bp | ACCCACCACATATGTAGACCTTCCCATAGAGTGTTGTaGCGCTCGCATCGCTCCGCTGCTCATGCATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: THHICRPSHRVL*RSHRSAAHAWG Trigger: CCCCCATGCATGAGCAGCGGAGCGATGCGAGCGCCACAACACTCTATGGGAAGGTCTACATATGTGGTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | GCTAATCCCGTGAAGTTGTCCCGTCTAGCTGCATACTCCCCAACATaGGCTAGCCCTGGTACCACGCAGCAGCTCAGAGCACTGCGGTAT | + |
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Preference number: 6 (lower is better) Translates to: ANPVKLSRLAAYSPT*ASPGTTQQLRALRY Trigger: ATACCGCAGTGCTCTGAGCTGCTGCGTGGTACCAGGGCTAGCCAATGTTGGGGAGTATGCAGCTAGACGGGACAACTTCACGGGATTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 72 bp | CGTGCGCCAAGTATTAGCCACTGGGCTGTAGGCTTCTaGACTCCTCAGTCGATTGGCTCCATCAAAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: RAPSISHWAVGF*TPQSIGSIKAT Trigger: GGTGGCTTTGATGGAGCCAATCGACTGAGGAGTGCAGAAGCCTACAGCCCAGTGGCTAATACTTGGCGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 72 bp | CTCCGCTGCTCATGCATGGGGGCAATGAGTGTCCATTaGTTGGTCTCTGGCTCGTACCGTTCAGCAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LRCSCMGAMSVH*LVSGSYRSAVL Trigger: CAACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 72 bp | GCTCCGCTGCTCATGCATGGGGGCAATGAGTGTCCATaGGTTGGTCTCTGGCTCGTACCGTTCAGCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: APLLMHGGNECP*VGLWLVPFSSV Trigger: AACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 72 bp | GTGAAGTTGTCCCGTCTAGCTGCATACTCCCCAACATaGGCTAGCCCTGGTACCACGCAGCAGCTCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VKLSRLAAYSPT*ASPGTTQQLRA Trigger: TGCTCTGAGCTGCTGCGTGGTACCAGGGCTAGCCAATGTTGGGGAGTATGCAGCTAGACGGGACAACTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | ACATTCACCCATCTGTCTGCTCGAGCATCGTATGCCTCAATGGCATaGGTGGGGCTCCCGCCACTCCAGCCACCAATAGCGAATAGGATG | + |
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Preference number: 6 (lower is better) Translates to: TFTHLSARASYASMA*VGLPPLQPPIANRM Trigger: CATCCTATTCGCTATTGGTGGCTGGAGTGGCGGGAGCCCCACCAATGCCATTGAGGCATACGATGCTCGAGCAGACAGATGGGTGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS TCA 72 bp | CCGAGACTTTCACCATCTCCTCGAAGTTGTGCAGGATaGACATGTAGGCCTTCTGCCTCAGCTCGGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PRLSPSPRSCAG*TCRPSASARGS Trigger: ACTGCCCCGAGCTGAGGCAGAAGGCCTACATGTTCATCCTGCACAACTTCGAGGAGATGGTGAAAGTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS TCA 72 bp | CCCCGTGGTAGGCTCGAGGACTTTCTTCCTCACACGTaGCATTCACCCATCTGTCTGCTCGAGCATCGTATG | + |
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Preference number: 6 (lower is better) Translates to: PRGRLEDFLPHT*HSPICLLEHRM Trigger: CATACGATGCTCGAGCAGACAGATGGGTGAATGTCACGTGTGAGGAAGAAAGTCCTCGAGCCTACCACGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 72 bp | TGGCTAGCCCTGGTACCACGCAGCAGCTCAGAGCACTaGGGTATATGCTCATGTCATGAGCGTCATACCACT | + |
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Preference number: 6 (lower is better) Translates to: WLALVPRSSSEH*GICSCHERHTT Trigger: AGTGGTATGACGCTCATGACATGAGCATATACCGCAGTGCTCTGAGCTGCTGCGTGGTACCAGGGCTAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 72 bp | CGCTGCTCATGCATGGGGGCAATGAGTGTCCATTGGTaGGTCTCTGGCTCGTACCGTTCAGCAGTGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RCSCMGAMSVHW*VSGSYRSAVLR Trigger: TCTCAACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCATGAGCAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS TCA 72 bp | ATTGGTTGGTCTCTGGCTCGTACCGTTCAGCAGTGTTaGGACGCACGTAGCCATCAAACCCTCCCATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: IGWSLARTVQQC*DARSHQTLPWH Trigger: ATGCCATGGGAGGGTTTGATGGCTACGTGCGTCTCAACACTGCTGAACGGTACGAGCCAGAGACCAACCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 72 bp | ATGCATGGGGGCAATGAGTGTCCATTGGTTGGTCTCTaGCTCGTACCGTTCAGCAGTGTTGAGACGCACGTA | + |
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Preference number: 6 (lower is better) Translates to: MHGGNECPLVGL*LVPFSSVETHV Trigger: TACGTGCGTCTCAACACTGCTGAACGGTACGAGCCAGAGACCAACCAATGGACACTCATTGCCCCCATGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 72 bp | CCACTGGGCTGTAGGCTTCTGCACTCCTCAGTCGATTaGCTCCATCAAAGCCACCCACTGCGTATACATGTT | + |
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Preference number: 6 (lower is better) Translates to: PLGCRLLHSSVD*LHQSHPLRIHV Trigger: AACATGTATACGCAGTGGGTGGCTTTGATGGAGCCAATCGACTGAGGAGTGCAGAAGCCTACAGCCCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CCA 72 bp | AAACATAGTGGGGATCGTGCGCCAAGTATTAGCCACTaGGCTGTAGGCTTCTGCACTCCTCAGTCGATTGGC | + |
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Preference number: 6 (lower is better) Translates to: KHSGDRAPSISH*AVGFCTPQSIG Trigger: GCCAATCGACTGAGGAGTGCAGAAGCCTACAGCCCAGTGGCTAATACTTGGCGCACGATCCCCACTATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 72 bp | TCGAAGCCATTGACTTTGATGACCACGTCGCAGAGCTaGCCCTCAAGCCGGAGCTCGTTGAAGATCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SKPLTLMTTSQS*PSSRSSLKISQ Trigger: CTGTGAGATCTTCAACGAGCTCCGGCTTGAGGGCAAGCTCTGCGACGTGGTCATCAAAGTCAATGGCTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | AGGCGGGGCCTGGTAAGTGGGTTGGTGAAGTCAGAATaGGAGGGTCCGTTCATGTTCAGGTCATACATAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRGLVSGLVKSE*EGPFMFRSYIA Trigger: GGCTATGTATGACCTGAACATGAACGGACCCTCCAATTCTGACTTCACCAACCCACTTACCAGGCCCCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | CTACAGAGGATGTTCTTGTGGGCATTGAACTCGAAGCCATTGACTTaGATGACCACGTCGCAGAGCTTGCCCTCAAGCCGGAGCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: LQRMFLWALNSKPLT*MTTSQSLPSSRSSL Trigger: CAACGAGCTCCGGCTTGAGGGCAAGCTCTGCGACGTGGTCATCAAAGTCAATGGCTTCGAGTTCAATGCCCACAAGAACATCCTCTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS TCA 72 bp | CCACGTCGCAGAGCTTGCCCTCAAGCCGGAGCTCGTTaGAGATCTCACAGGTCATTGCACTCATCTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PRRRACPQAGAR*RSHRSLHSSFF Trigger: AAAGAAAGATGAGTGCAATGACCTGTGAGATCTTCAACGAGCTCCGGCTTGAGGGCAAGCTCTGCGACGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS TCA 72 bp | CCTTCTGCCTCAGCTCGGGGCAGTAGTAGTAGTCCGTaGACTTGCAGATGCCGATACAGTTATCCAGACACA | + |
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Preference number: 6 (lower is better) Translates to: PSASARGSSSSP*TCRCRYSYPDT Trigger: TGTGTCTGGATAACTGTATCGGCATCTGCAAGTTCACGGACTACTACTACTGCCCCGAGCTGAGGCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS GCA 72 bp | GTCCTTGAGCTCAGTGACAGAGAGCTCCAGAAACTCTaGCGAGACTTTCACCATCTCCTCGAAGTTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VLELSDRELQKL*RDFHHLLEVVQ Trigger: CTGCACAACTTCGAGGAGATGGTGAAAGTCTCGGCAGAGTTTCTGGAGCTCTCTGTCACTGAGCTCAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | ACCACGTCGCAGAGCTTGCCCTCAAGCCGGAGCTCGTaGAAGATCTCACAGGTCATTGCACTCATCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TTSQSLPSSRSS*KISQVIALIFL Trigger: AAGAAAGATGAGTGCAATGACCTGTGAGATCTTCAACGAGCTCCGGCTTGAGGGCAAGCTCTGCGACGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | ATGTTCTTGTGGGCATTGAACTCGAAGCCATTGACTTaGATGACCACGTCGCAGAGCTTGCCCTCAAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: MFLWALNSKPLT*MTTSQSLPSSR Trigger: CCGGCTTGAGGGCAAGCTCTGCGACGTGGTCATCAAAGTCAATGGCTTCGAGTTCAATGCCCACAAGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 90 bp | GCATTGAACTCGAAGCCATTGACTTTGATGACCACGTCGCAGAGCTaGCCCTCAAGCCGGAGCTCGTTGAAGATCTCACAGGTCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: ALNSKPLTLMTTSQS*PSSRSSLKISQVIA Trigger: TGCAATGACCTGTGAGATCTTCAACGAGCTCCGGCTTGAGGGCAAGCTCTGCGACGTGGTCATCAAAGTCAATGGCTTCGAGTTCAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 90 bp | GAAGCGGAATACTTTACTTCATCTCGCAGTGCTAATCCCGTGAAGTaGTCCCGTCTAGCTGCATACTCCCCAACATTGGCTAGCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EAEYFTSSRSANPVK*SRLAAYSPTLASPG Trigger: ACCAGGGCTAGCCAATGTTGGGGAGTATGCAGCTAGACGGGACAACTTCACGGGATTAGCACTGCGAGATGAAGTAAAGTATTCCGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS TCA 72 bp | TCACAGCAACCCCTAACGATGCCCATGATGTTAAACTaGTCAGCAGCGGCCAGCAGCTTCTCCACATTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SQQPLTMPMMLN*SAAASSFSTLS Trigger: TGACAATGTGGAGAAGCTGCTGGCCGCTGCTGATCAGTTTAACATCATGGGCATCGTTAGGGGTTGCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CCA 72 bp | CAGACAAAGAGAGCAAGAGACCTATTTTGTGGCTCTTaGGGACGCTCCCTCTGGGTAGAGGAATCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: QTKRARDLFCGS*GRSLWVEESNR Trigger: CCTGTTTGATTCCTCTACCCAGAGGGAGCGTCCCCAAGAGCCACAAAATAGGTCTCTTGCTCTCTTTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107395.3 |
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| CDS CAA 72 bp | CAGAGGATGTTCTTGTGGGCATTGAACTCGAAGCCATaGACTTTGATGACCACGTCGCAGAGCTTGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QRMFLWALNSKP*TLMTTSQSLPS Trigger: TGAGGGCAAGCTCTGCGACGTGGTCATCAAAGTCAATGGCTTCGAGTTCAATGCCCACAAGAACATCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | GCAGACAAAGAGAGCAAGAGACCTATTTTGTGGCTCTaGGGGACGCTCCCTCTGGGTAGAGGAATCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: ADKESKRPILWL*GTLPLGRGIKQ Trigger: CTGTTTGATTCCTCTACCCAGAGGGAGCGTCCCCAAGAGCCACAAAATAGGTCTCTTGCTCTCTTTGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107395.3 |
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| CDS CAA 90 bp | CCACCCACCACAAACAAGAGGTCGTCCACTACCTCGATCCCAAAATaGCTACGAGGGTTAAACATAGTGGGGATCGTGCGCCAAGTATTA | + |
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Preference number: 6 (lower is better) Translates to: PPTTNKRSSTTSIPK*LRGLNIVGIVRQVL Trigger: TAATACTTGGCGCACGATCCCCACTATGTTTAACCCTCGTAGCAATTTTGGGATCGAGGTAGTGGACGACCTCTTGTTTGTGGTGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 72 bp | ACAAACAAGAGGTCGTCCACTACCTCGATCCCAAAATaGCTACGAGGGTTAAACATAGTGGGGATCGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: TNKRSSTTSIPK*LRGLNIVGIVR Trigger: GCGCACGATCCCCACTATGTTTAACCCTCGTAGCAATTTTGGGATCGAGGTAGTGGACGACCTCTTGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | GTGAACTTGCAGATGCCGATACAGTTATCCAGACACAGCTCCGACTaGAGGAACTCACAGCAACCCCTAACGATGCCCATGATGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: VNLQMPIQLSRHSSD*RNSQQPLTMPMMLN Trigger: GTTTAACATCATGGGCATCGTTAGGGGTTGCTGTGAGTTCCTCAAGTCGGAGCTGTGTCTGGATAACTGTATCGGCATCTGCAAGTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | TACTTTACTTCATCTCGCAGTGCTAATCCCGTGAAGTaGTCCCGTCTAGCTGCATACTCCCCAACATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: YFTSSRSANPVK*SRLAAYSPTLA Trigger: AGCCAATGTTGGGGAGTATGCAGCTAGACGGGACAACTTCACGGGATTAGCACTGCGAGATGAAGTAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | ACCTATTCCACTCCTCCTGCTCCTCATGGGTGCAATGACTGTCCATaGATTGCTCTCAGTGTTGTACACTTCTGCTGTAAACAGGCATTC | + |
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Preference number: 6 (lower is better) Translates to: TYSTPPAPHGCNDCP*IALSVVHFCCKQAF Trigger: GAATGCCTGTTTACAGCAGAAGTGTACAACACTGAGAGCAATCAATGGACAGTCATTGCACCCATGAGGAGCAGGAGGAGTGGAATAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS CAA 90 bp | ATCCACTTTAAAATGGCCTCGAATACTGCGTCCTCCTGCTTCACGTaGAGTTCGTCTTTCTCAATGATGTCCTTGAGCTCAGTGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: IHFKMASNTASSCFT*SSSFSMMSLSSVTE Trigger: CTCTGTCACTGAGCTCAAGGACATCATTGAGAAAGACGAACTCAACGTGAAGCAGGAGGACGCAGTATTCGAGGCCATTTTAAAGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | AAAATGGCCTCGAATACTGCGTCCTCCTGCTTCACGTaGAGTTCGTCTTTCTCAATGATGTCCTTGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: KMASNTASSCFT*SSSFSMMSLSS Trigger: TGAGCTCAAGGACATCATTGAGAAAGACGAACTCAACGTGAAGCAGGAGGACGCAGTATTCGAGGCCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS CAA 72 bp | ACTCCTCCTGCTCCTCATGGGTGCAATGACTGTCCATaGATTGCTCTCAGTGTTGTACACTTCTGCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: TPPAPHGCNDCP*IALSVVHFCCK Trigger: TTTACAGCAGAAGTGTACAACACTGAGAGCAATCAATGGACAGTCATTGCACCCATGAGGAGCAGGAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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| CDS GCA 72 bp | ATCCACTTTAAAATGGCCTCGAATACTGCGTCCTCCTaGTTCACGTTGAGTTCGTCTTTCTCAATGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: IHFKMASNTASS*FTLSSSFSMMS Trigger: GGACATCATTGAGAAAGACGAACTCAACGTGAAGCAGGAGGACGCAGTATTCGAGGCCATTTTAAAGTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001599.4 ENSMUST00000107395.3 |
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| CDS GCA 72 bp | GACTGTCCATTGATTGCTCTCAGTGTTGTACACTTCTaGTGTAAACAGGCATTCGTTTCCGTTAAACCCACC | + |
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Preference number: 6 (lower is better) Translates to: DCPLIALSVVHF*CKQAFVSVKPT Trigger: GGTGGGTTTAACGGAAACGAATGCCTGTTTACAGCAGAAGTGTACAACACTGAGAGCAATCAATGGACAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001599.4 |
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