Pregenerated sensors for KLHL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022076Ensembl transcript IDs: ENSMUST00000022666.9
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCATGAGGCAAATGCCCATAGCTGCAGTGACTCTTTGGCTCAGTaGGTTGACAATGCAAAGCGATGTGGCAAGCTTTATGGAAAGTAC | + |
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Preference number: 1 (lower is better) Translates to: LHEANAHSCSDSLAQ*VDNAKRCGKLYGKY Trigger: GTACTTTCCATAAAGCTTGCCACATCGCTTTGCATTGTCAACCCACTGAGCCAAAGAGTCACTGCAGCTATGGGCATTTGCCTCATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 90 bp | AAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATaGCTGACATCTATAGTATGTTTGGAAGGTACCAACAGGGCCATA | + |
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Preference number: 1 (lower is better) Translates to: KEVIMGTLLGMCAVT*LTSIVCLEGTNRAI Trigger: TATGGCCCTGTTGGTACCTTCCAAACATACTATAGATGTCAGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CCA 90 bp | CATGCATGTCTACACATAGACAGAGATATACAGTTGGTGGATAAATaGATGGGGGTCAGCCCTCCCAAGGCAACAACTTTATTTACTTTT | + |
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Preference number: 1 (lower is better) Translates to: HACLHIDRDIQLVDK*MGVSPPKATTLFTF Trigger: AAAAGTAAATAAAGTTGTTGCCTTGGGAGGGCTGACCCCCATCCATTTATCCACCAACTGTATATCTCTGTCTATGTGTAGACATGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 90 bp | AAAGGGAAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTaGTGTGACATGCCTGACATCTATAGTATGTTTGGAAGGTACCAA | + |
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Preference number: 1 (lower is better) Translates to: KGKQRSHHGDIIGNV*CDMPDIYSMFGRYQ Trigger: TTGGTACCTTCCAAACATACTATAGATGTCAGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTTCCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CCA 90 bp | GATCGATTCCATGAAGACCACCTGCTAGCTCTAGCCTTTTCTAGATaGCTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: DRFHEDHLLALAFSR*LEAKDVKNQILQEK Trigger: TTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAGCCATCTAGAAAAGGCTAGAGCTAGCAGGTGGTCTTCATGGAATCGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 90 bp | CAATGCAAAGCGATGTGGCAAGCTTTATGGAAAGTACTTTTTGTTTaGCAGTTCGAGACTGATGACACAGTTGTAATAAAATCCAATCAT | + |
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Preference number: 1 (lower is better) Translates to: QCKAMWQALWKVLFV*QFETDDTVVIKSNH Trigger: ATGATTGGATTTTATTACAACTGTGTCATCAGTCTCGAACTGGCAAACAAAAAGTACTTTCCATAAAGCTTGCCACATCGCTTTGCATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTTGTTCCCTTCTCTGCTaGGACAGCCAGGAGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPCSLLC*DSQEPV Trigger: GACAGGCTCCTGGCTGTCTCAGCAGAGAAGGGAACA...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CAA 90 bp | ATGAGGCAAATGCCCATAGCTGCAGTGACTCTTTGGCTCAGTGGGTaGACAATGCAAAGCGATGTGGCAAGCTTTATGGAAAGTACTTTT | + |
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Preference number: 2 (lower is better) Translates to: MRQMPIAAVTLWLSG*TMQSDVASFMESTF Trigger: AAAAGTACTTTCCATAAAGCTTGCCACATCGCTTTGCATTGTCAACCCACTGAGCCAAAGAGTCACTGCAGCTATGGGCATTTGCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CAA 90 bp | TCCACAAGTATTCATGCATGTCTACACATAGACAGAGATATACAGTaGGTGGATAAATGGATGGGGGTCAGCCCTCCCAAGGCAACAACT | + |
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Preference number: 2 (lower is better) Translates to: STSIHACLHIDRDIQ*VDKWMGVSPPKATT Trigger: AGTTGTTGCCTTGGGAGGGCTGACCCCCATCCATTTATCCACCAACTGTATATCTCTGTCTATGTGTAGACATGCATGAATACTTGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTTTTGGCTCAGTGGGTTaGCAATGCAAAGCGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPFGSVG*QCKAMW Trigger: CCACATCGCTTTGCATTGTCAACCCACTGAGCCAAA...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTGCAAATGCCCATAGCTaGAGTGACTCTTTGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPANAHS*SDSLAQ Trigger: CTGAGCCAAAGAGTCACTGCAGCTATGGGCATTTGC...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTCTCTTGGCCACCTCTTaGGAATCCTCACAGATTATG | + |
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Preference number: 2 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPLLATS*ESSQIM Trigger: CATAATCTGTGAGGATTCCCAAGAGGTGGCCAAGAG...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR TCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTGGGCAGTTTGTTTTCTaGATGCAGAGACAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCGQFVF*MQRQSS Trigger: AGATGATTGTCTCTGCATTCAGAAAACAAACTGCCC...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTGCTGCAGTGACTCTTTaGCTCAGTGGGTTGACAATG | + |
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Preference number: 2 (lower is better) Translates to: LEAKDVKNQILQEKGSGGAAVTL*LSGLTM Trigger: CATTGTCAACCCACTGAGCCAAAGAGTCACTGCAGC...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTTCAGAGGACAACTTCTaGTGTTTGTCCTTGCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPSEDNF*CLSLPN Trigger: GTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGA...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTGCTTATACTGAACTCTaGATGAGGCAAATGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPAYTEL*MRQMPI Trigger: TATGGGCATTTGCCTCATGCAGAGTTCAGTATAAGC...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR TCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATGGTTCTCTAGTTTCTaGAGATTCTCCTGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTWFSSF*RFSCLC Trigger: ACAGAGGCAGGAGAATCTTCAGAAACTAGAGAACCA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR GCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTAAAGTACTTTTTGTTTaGCAGTTCGAGACTGATGAC | + |
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Preference number: 2 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCKVLFV*QFETDD Trigger: GTCATCAGTCTCGAACTGGCAAACAAAAAGTACTTT...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTTCTGGTGTTTGTCCTTaGCTAACACCTTGTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: LEAKDVKNQILQEKGSGGSGVCP*LTPCVT Trigger: TGTCACACAAGGTGTTAGGCAAGGACAAACACCAGA...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR GCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCTTCTTGTTAATCTTTaGATGAGGCCAAACTATTTG | + |
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Preference number: 2 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCLLVNL*MRPNYL Trigger: CAAATAGTTTGGCCTCATGCAAAGATTAACAAGAAG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTGAACTAATTAACTATTaGCCAGATGTTGTGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCELINY*PDVVSD Trigger: ATCAGACACAACATCTGGCCAATAGTTAATTAGTTC...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTATCCAATCATCATTTTaGATACAATATGCAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCIQSSF*IQYAAL Trigger: CAAGGCTGCATATTGTATCCAAAATGATGATTGGAT...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR TCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACATCCATGCTTATACTaGACTCTGCATGAGGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLHPCLY*TLHEAN Trigger: ATTTGCCTCATGCAGAGTTCAGTATAAGCATGGATG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTTTCAACAAAACATTCTaGCTCTTGCTATCATCACAT | + |
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Preference number: 2 (lower is better) Translates to: LEAKDVKNQILQEKGSGGFNKTF*LLLSSH Trigger: ATGTGATGATAGCAAGAGGCAGAATGTTTTGTTGAA...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CCA 72 bp | TGCATGAGGCAAATGCCCATAGCTGCAGTGACTCTTTaGCTCAGTGGGTTGACAATGCAAAGCGATGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: CMRQMPIAAVTL*LSGLTMQSDVA Trigger: TGCCACATCGCTTTGCATTGTCAACCCACTGAGCCAAAGAGTCACTGCAGCTATGGGCATTTGCCTCATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 72 bp | TCTATAGTATGTTTGGAAGGTACCAACAGGGCCATATaGAGTTGTGGTGGCAGAAGTTGTGATTACTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SIVCLEGTNRAI*SCGGRSCDYWS Trigger: GCTCCAGTAATCACAACTTCTGCCACCACAACTGCATATGGCCCTGTTGGTACCTTCCAAACATACTATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CCA 72 bp | CTACACATAGACAGAGATATACAGTTGGTGGATAAATaGATGGGGGTCAGCCCTCCCAAGGCAACAACTTTA | + |
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Preference number: 3 (lower is better) Translates to: LHIDRDIQLVDK*MGVSPPKATTL Trigger: TAAAGTTGTTGCCTTGGGAGGGCTGACCCCCATCCATTTATCCACCAACTGTATATCTCTGTCTATGTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CAA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACTTTGGCTCAGTGGGTaGACAATGCAAAGCGATGTG | + |
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Preference number: 3 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTLWLSG*TMQSDV Trigger: CACATCGCTTTGCATTGTCAACCCACTGAGCCAAAG...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 72 bp | GATGGCTTGAGGCAAAAGATGTTAAGAATCAGATATTaGAAGAGAAAGGATCAGGAGGTGCAGAAGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: DGLRQKMLRIRY*KRKDQEVQKLR Trigger: CCTCAACTTCTGCACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 72 bp | ATCATGGGGACATTATTGGGAATGTGTGCTGTGACATaGCTGACATCTATAGTATGTTTGGAAGGTACCAAC | + |
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Preference number: 3 (lower is better) Translates to: IMGTLLGMCAVT*LTSIVCLEGTN Trigger: GTTGGTACCTTCCAAACATACTATAGATGTCAGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CAA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACAACTCTTGGCCACCTCTaGGGAATCCTCACAGATTAT | + |
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Preference number: 3 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTTLGHL*GILTDY Trigger: ATAATCTGTGAGGATTCCCAAGAGGTGGCCAAGAGT...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 72 bp | CAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTaGTGTGACATGCCTGACATCTATAGTATGTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: QRSHHGDIIGNV*CDMPDIYSMFG Trigger: TCCAAACATACTATAGATGTCAGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CCA 72 bp | ATAGAGGCCCAAGTGTGCTTGTGTTATATATATATATaGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: IEAQVCLCYIYI*RSEDNFWCLSL Trigger: CAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATATAACACAAGCACACTTGGGCCTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTATACAATATGCAGCCTaGATTAGCAGGGCAGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LEAKDVKNQILQEKGSGGIQYAA*ISRAVC Trigger: ACAAACTGCCCTGCTAATCAAGGCTGCATATTGTAT...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 72 bp | CTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTaGTTGTGTTATATATATATATGGAGGTCAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LFLMYMGIEAQV*LCYIYIWRSED Trigger: GTCCTCTGACCTCCATATATATATATAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR GCA 72 bp | GCGATGTGGCAAGCTTTATGGAAAGTACTTTTTGTTTaGCAGTTCGAGACTGATGACACAGTTGTAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: AMWQALWKVLFV*QFETDDTVVIK Trigger: TTTTATTACAACTGTGTCATCAGTCTCGAACTGGCAAACAAAAAGTACTTTCCATAAAGCTTGCCACATCGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR TCA 72 bp | TTAAGCTATATGAGAGTGAAGGGAAAATATATCAGCTaGATCAAGCCATTCTTTTATGAAGTCTCTTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: LSYMRVKGKYIS*IKPFFYEVSWD Trigger: GTCCCAAGAGACTTCATAAAAGAATGGCTTGATTCAGCTGATATATTTTCCCTTCACTCTCATATAGCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CCA 72 bp | AGATACAAATTTTCACATCTGGTTTTAAATGAGTCCTaGCAATCTGTTGTGAGACACTCATACTTGCATTAC | + |
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Preference number: 3 (lower is better) Translates to: RYKFSHLVLNES*QSVVRHSYLHY Trigger: GTAATGCAAGTATGAGTGTCTCACAACAGATTGCCAGGACTCATTTAAAACCAGATGTGAAAATTTGTATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR TCA 72 bp | CTTTATGTAGATCTGCAGGAATATTTCTCAATTGAGTaGGATAATGTCCAGGAATCCTTAAGCTATATGAGA | + |
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Preference number: 3 (lower is better) Translates to: LYVDLQEYFSIE*DNVQESLSYMR Trigger: TCTCATATAGCTTAAGGATTCCTGGACATTATCTCACTCAATTGAGAAATATTCCTGCAGATCTACATAAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR GCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCCTGTTGCAGGCAGCTaGCCCCCGCTGGGCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCPVAGS*PPLGYW Trigger: CCAGTAGCCCAGCGGGGGGCAGCTGCCTGCAACAGG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR GCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTTGCCCGGGAGCCCCTTaGTGCAGCCTCGTGGCAACT | + |
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Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCCPGAP*CSLVAT Trigger: AGTTGCCACGAGGCTGCAGCAAGGGGCTCCCGGGCA...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CAA 72 bp | CTGCATGAGGCAAATGCCCATAGCTGCAGTGACTCTTaGGCTCAGTGGGTTGACAATGCAAAGCGATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LHEANAHSCSDS*AQWVDNAKRCG Trigger: GCCACATCGCTTTGCATTGTCAACCCACTGAGCCAAAGAGTCACTGCAGCTATGGGCATTTGCCTCATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAGGCTGCTGGGTGCCCTaGCCGGGAGCCCCTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLGCWVP*PGAPCC Trigger: GCAGCAAGGGGCTCCCGGGCAGGGCACCCAGCAGCC...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACCGGGAGCCCCTTGCTaGAGCCTCGTGGCAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLPGAPC*SLVATG Trigger: ACCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCCGG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTCCTTCACCTGTTGCCTaGATAGAGCTGGCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPPSPVA*IELAGS Trigger: GGAGCCTGCCAGCTCTATCCAGGCAACAGGTGAAGG...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| 3UTR CAA 72 bp | GTTCCCTTCTCTGCTGAGACAGCCAGGAGCCTGTCATaGGCCACACTTGTTAACTTTGTTAACCAGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VPFSAETARSLS*ATLVNFVNQRE Trigger: TTCTCTCTGGTTAACAAAGTTAACAAGTGTGGCCAATGACAGGCTCCTGGCTGTCTCAGCAGAGAAGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR TCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACCGGCGAGGGATGGCTaGAGAGTTTCCAGCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLPARDG*RVSSGV Trigger: GACTCCGCTGGAAACTCTTCAGCCATCCCTCGCCGG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAGAGGCCGGCGAGGGATaGCTGAAGAGTTTCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLEAGEG*LKSFQR Trigger: CCGCTGGAAACTCTTCAGCCATCCCTCGCCGGCCTC...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTACAGCCACACCGAACTaGAGCCTTCTGCCATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPTATPN*SLLPFI Trigger: GATGAATGGCAGAAGGCTTCAGTTCGGTGTGGCTGT...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATTGAGCAGCCGACTCTaGCTAGGACCCCAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTLSSRL*LGPQCS Trigger: TGAGCACTGGGGTCCTAGCCAGAGTCGGCTGCTCAA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTACATATGTCCACTGCTaGCTCTGGGGATCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPTYVHC*LWGSHL Trigger: AAGGTGGGATCCCCAGAGCCAGCAGTGGACATATGT...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACACACTTCGACCACTTaGGGGAGCTGGAGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTHTSTT*GSWRRQ Trigger: TTGCCTTCTCCAGCTCCCTCAAGTGGTCGAAGTGTG...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTAGAGCTTGTCATCAATaGCAGCCACACCGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCRACHQ*QPHRTE Trigger: TTCAGTTCGGTGTGGCTGTCATTGATGACAAGCTCT...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| 3UTR CAA 72 bp | ATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTaGCCTAACACCTTGTGTGACATAAGTCCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IWRSEDNFWCLS*PNTLCDISPFL Trigger: CAAGAAGGGACTTATGTCACACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| 3UTR CAA 72 bp | ATTCATGCATGTCTACACATAGACAGAGATATACAGTaGGTGGATAAATGGATGGGGGTCAGCCCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHACLHIDRDIQ*VDKWMGVSPPK Trigger: CTTGGGAGGGCTGACCCCCATCCATTTATCCACCAACTGTATATCTCTGTCTATGTGTAGACATGCATGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTAGTTTCATGAGGAAGTaGCAACACACTTCGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCSFMRK*QHTSTT Trigger: AGTGGTCGAAGTGTGTTGTCACTTCCTCATGAAACT...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACCTGGAACAGTGGTTTaGAGCAGGAGCATCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLPGTVV*SRSIMA Trigger: GGCCATGATGCTCCTGCTTCAAACCACTGTTCCAGG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTACATCCTTCACCTGTTaGCTGGATAGAGCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGTSFTC*LDRAGR Trigger: CCTGCCAGCTCTATCCAGGCAACAGGTGAAGGATGT...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTGACCCACATCATCAGTaGATGGAAAATGGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCDPHHQ*MENGLF Trigger: GAAGAGACCATTTTCCATGCACTGATGATGTGGGTC...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACTTGCTGCAGCCTCGTaGCAACTGGTAGTAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLLAAAS*QLVVRC Trigger: GCACCTTACTACCAGTTGCCACGAGGCTGCAGCAAG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAGAAGCAGGAGCATCATaGCCACCCACTGCATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLEAGAS*PPTAYR Trigger: CCTGTATGCAGTGGGTGGCCATGATGCTCCTGCTTC...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCCTGTATATGCAAATTaGACAAGATCCCAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCPVYAN*TRSQSA Trigger: TGCACTCTGGGATCTTGTTCAATTTGCATATACAGG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTTCTCCCAATATTCAATaGAGCCATCTGTGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPSPNIQ*SHLCPL Trigger: GAGTGGACACAGATGGCTTCATTGAATATTGGGAGA...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACAGTCCAGAAAAGTCCATaGCTGTCACTACCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTVQKSP*LSLPPP Trigger: AGGAGGAGGTAGTGACAGGCATGGACTTTTCTGGAC...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTAACAAGATCCCAGAGTaGATTTGGGTCTATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPNKIPE*IWVYAF Trigger: GAAGGCATAGACCCAAATGCACTCTGGGATCTTGTT...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTACACTGCCCTTTTCCTaGTTTTTGAGCAGCCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGTLPFS*FLSSRL Trigger: GAGTCGGCTGCTCAAAAACCAGGAAAAGGGCAGTGT...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTCCATTATGTTTTCCATaGTGTAGCTGTGTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPPLCFP*CSCVPP Trigger: AGGTGGCACACAGCTACACCATGGAAAACATAATGG...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| 3UTR CAA 72 bp | GAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTaGTGTGACATAAGTCCCTTCTTGTTAATCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDNFWCLSLPNT*CDISPFLLIFA Trigger: TGCAAAGATTAACAAGAAGGGACTTATGTCACACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| 3UTR CAA 72 bp | ATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTaGTCCTTGCCTAACACCTTGTGTGACATAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IYIWRSEDNFWC*SLPNTLCDISP Trigger: GGGACTTATGTCACACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATGCCATTCAGCGGATTaGAAGGAGAAGATGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTCHSAD*KEKMKQ Trigger: CTGCTTCATCTTCTCCTTTCAATCCGCTGAATGGCA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTCTATGCCTTCCATCTTaGTCTCCTCTTGCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGLCLPS*SPLAWL Trigger: AAGCCAAGCAAGAGGAGATCAAGATGGAAGGCATAG...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTCGGAGTCGCAGGATGTaGTTCACATCGAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGRSRRM*FTSKSF Trigger: AAAAGACTTCGATGTGAAGCACATCCTGCGACTCCG...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATCACTACATCTCCGCTaGATGTCATACTTGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTSLHLR*MSYLTH Trigger: GTGGGTCAAGTATGACATGCAGCGGAGATGTAGTGA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTGTTACTCCTAGACCATaGCTATGTGTTGACATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPVTPRP*LCVDIG Trigger: ACCAATGTCAACACATAGGCATGGTCTAGGAGTAAC...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACTGGCCAGTAGTTTATaGAGCTCTTCAGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLLASSL*SSSAGR Trigger: CCTTCCAGCTGAAGAGCTCCATAAACTACTGGCCAG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACCGTGCTCCGAGCAATaGACATACTGGCTACATATG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLPCSEQ*TYWLHM Trigger: CATATGTAGCCAGTATGTCCATTGCTCGGAGCACGG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAAGGAGCCTGGAACAGTaGTTTGAAGCAGGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLRSLEQ*FEAGAS Trigger: TGATGCTCCTGCTTCAAACCACTGTTCCAGGCTCCT...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTCCACTCATTAGTTTGTaGATCATAGGACTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPPLISL*IIGLHG Trigger: ACCATGGAGTCCTATGATCCACAAACTAATGAGTGG...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACAATTGAAAGGAGAAGATaGAGCAGAAGACGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTIERRR*SRRRGG Trigger: TCCTCCTCGTCTTCTGCTTCATCTTCTCCTTTCAAT...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTATCATAGTATTCCATTaGACTCAGACAGGAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPIIVFH*TQTGTS Trigger: GGAAGTTCCTGTCTGAGTTCAATGGAATACTATGAT...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACGAACTGAAGCCTTCTaGCATTCATCATTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLRTEAF*HSSFQP Trigger: AGGCTGGAATGATGAATGGCAGAAGGCTTCAGTTCG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACCTCTTACACATCGGTaGGCACATGCTCCACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLPLTHR*AHAPLI Trigger: AATAAGTGGAGCATGTGCGCACCGATGTGTAAGAGG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTATCCCAGAGTGCATTTaGGTCTATGCCTTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGIPECI*VYAFHL Trigger: AAGATGGAAGGCATAGACCCAAATGCACTCTGGGAT...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCCATGTATCTGTTTTTaGATCATACCTTTCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCPCICF*IIPFHV Trigger: TACGTGGAAAGGTATGATCCAAAAACAGATACATGG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACTCCATCTTTCTAAATaGTTGCTCAGCATGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTLHLSK*LLSMVN Trigger: GTTCACCATGCTGAGCAATCATTTAGAAAGATGGAG...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTGATGCAGAAGTTTCATaGGGAAGTGACAACACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGDAEVS*GSDNTL Trigger: AAGTGTGTTGTCACTTCCTCATGAAACTTCTGCATC...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR TCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAGCAGTGGTAATCTTATaGAGGCAAGGAGCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLAVVIL*RQGAYS Trigger: TGAGTATGCTCCTTGCCTTCATAAGATTACCACTGC...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATCAAAGGAGCCACCATaGTCCATGTATCTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTSKEPP*SMYLFL Trigger: CAAAAACAGATACATGGACCATGGTGGCTCCTTTGA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAATCTTGATCTCCTCTTaGTTGGCTTCACAGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLILISS*LASQTS Trigger: TGATGTCTGTGAAGCCAAGCAAGAGGAGATCAAGAT...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAATTCTTCGGAGCTGCTaGAATCCAAATCACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLILRSC*NPNHFE Trigger: CTCAAAGTGATTTGGATTCCAGCAGCTCCGAAGAAT...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACATTTACATCATCACTaGCCAGTAGTTTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTHLHHH*PVVYGA Trigger: AGCTCCATAAACTACTGGCCAGTGATGATGTAAATG...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTTTCTTGAATAGTGCATaGTTTTCAAGGTCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGFLNSA*FSRSAS Trigger: ACTGGCTGACCTTGAAAACCATGCACTATTCAAGAA...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAAGAATTCTTCGGAGCTaGTGGAATCCAAATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLRILRS*WNPNHF Trigger: AAAGTGATTTGGATTCCAGCAGCTCCGAAGAATTCT...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACACATCATCAGTGCATaGAAAATGGTCTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLHIISA*KMVSSS Trigger: TGATGAAGAGACCATTTTCCATGCACTGATGATGTG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTACCTTCATTAATTCAATaGATCCTTGAGCATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLPSLIQ*ILEHQQ Trigger: TTGCTGATGCTCAAGGATGCATTGAATTAATGAAGG...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CCA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATTATTCCTAAACAGTTaGATGGATGCAGAAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTLFLNS*MDAEVS Trigger: TGAAACTTCTGCATCCATCCAACTGTTTAGGAATAA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTATCCATGTCTTGGTTTTaGGATTGTAACATTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLSMSWF*DCNIQQ Trigger: CTGTTGAATGTTACAATCCCAAAACCAAGACATGGA...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTAAACAGTCCATGTCTTaGTTTTGGGATTGTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKDVKNQILQEKGSGGKQSMS*FWDCNI Trigger: AATGTTACAATCCCAAAACCAAGACATGGACTGTTT...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 90 bp | CAGGAGCATCATGGCCACCCACTGCATACAGGAAACCATCACAGGTaGCCACTCCAACACCCCCTCTCCTCTTACACATCGGTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QEHHGHPLHTGNHHR*PLQHPLSSYTSVRT Trigger: TGTGCGCACCGATGTGTAAGAGGAGAGGGGGTGTTGGAGTGGCCACCTGTGATGGTTTCCTGTATGCAGTGGGTGGCCATGATGCTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 90 bp | CCACATCCTTCACCTGTTGCCTGGATAGAGCTGGCAGGCTCCGCTTaGAGCTCTTTCAGGGCCAATCCTTTGTCCTCTGGTCCAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PHPSPVAWIELAGSA*SSFRANPLSSGPEK Trigger: CTTTTCTGGACCAGAGGACAAAGGATTGGCCCTGAAAGAGCTCCAAGCGGAGCCTGCCAGCTCTATCCAGGCAACAGGTGAAGGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 90 bp | CCCCAACGGAGTACAACTTTCCATTCAGTGCTGCTACTCCAACCGTaGTCCGAGCAATGGACATACTGGCTACATATGTCCACTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRSTTFHSVLLLQP*SEQWTYWLHMSTAG Trigger: GCCAGCAGTGGACATATGTAGCCAGTATGTCCATTGCTCGGAGCACGGTTGGAGTAGCAGCACTGAATGGAAAGTTGTACTCCGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS TCA 90 bp | TGGATCATACCTTTCCACGTAGTCCAGGAGCCTGGAACAGTGGTTTaGAGCAGGAGCATCATGGCCACCCACTGCATACAGGAAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: WIIPFHVVQEPGTVV*SRSIMATHCIQETI Trigger: GATGGTTTCCTGTATGCAGTGGGTGGCCATGATGCTCCTGCTTCAAACCACTGTTCCAGGCTCCTGGACTACGTGGAAAGGTATGATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS TCA 90 bp | TTTCAAGGTCAGCCAGTATCTGTGGTGGAAGCAGTGGTAATCTTATaGAGGCAAGGAGCATACTCAGGTCACTACATCTCCGCTGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: FQGQPVSVVEAVVIL*RQGAYSGHYISAAC Trigger: ACATGCAGCGGAGATGTAGTGACCTGAGTATGCTCCTTGCCTTCATAAGATTACCACTGCTTCCACCACAGATACTGGCTGACCTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTACACACTTCGACCACTaGAGGGAGCTGGAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPTHFDH*RELEKA Trigger: TGCCTTCTCCAGCTCCCTCAAGTGGTCGAAGTGTGT...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTCCCTTTTCCTGGTTTTaGAGCAGCCGACTCTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPPFSWF*SSRLWL Trigger: TAGCCAGAGTCGGCTGCTCAAAAACCAGGAAAAGGG...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCGCTGCATGTCATACTaGACCCACATCATCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCRCMSY*THIISA Trigger: TGCACTGATGATGTGGGTCAAGTATGACATGCAGCG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 90 bp | AATCTTATGAAGGCAAGGAGCATACTCAGGTCACTACATCTCCGCTaGATGTCATACTTGACCCACATCATCAGTGCATGGAAAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLMKARSILRSLHLR*MSYLTHIISAWKMV Trigger: GACCATTTTCCATGCACTGATGATGTGGGTCAAGTATGACATGCAGCGGAGATGTAGTGACCTGAGTATGCTCCTTGCCTTCATAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTTTCAGGGCCAATCCTTaGTCCTCTGGTCCAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPFRANP*SSGPEK Trigger: CTTTTCTGGACCAGAGGACAAAGGATTGGCCCTGAA...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS GCA 90 bp | ATGATTGCTCAGCATGGTGAACAGCTTGATAGAATTCTTCGGAGCTaGTGGAATCCAAATCACTTTGAGGTGTCAGTGAATGATTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MIAQHGEQLDRILRS*WNPNHFEVSVNDWS Trigger: CGACCAATCATTCACTGACACCTCAAAGTGATTTGGATTCCAGCAGCTCCGAAGAATTCTATCAAGCTGTTCACCATGCTGAGCAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 90 bp | ATTGCTCAGCATGGTGAACAGCTTGATAGAATTCTTCGGAGCTGCTaGAATCCAAATCACTTTGAGGTGTCAGTGAATGATTGGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IAQHGEQLDRILRSC*NPNHFEVSVNDWSM Trigger: CATCGACCAATCATTCACTGACACCTCAAAGTGATTTGGATTCCAGCAGCTCCGAAGAATTCTATCAAGCTGTTCACCATGCTGAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTGTGCCATTCAGCGGATaGAAAGGAGAAGATGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPVPFSG*KGEDEA Trigger: TGCTTCATCTTCTCCTTTCAATCCGCTGAATGGCAC...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTGACCATGCCTATGTGTaGACATTGGTGGCAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPDHAYV*TLVAKQ Trigger: CTGTTTTGCCACCAATGTCAACACATAGGCATGGTC...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACAGATCCCAGAGTGCATTaGGGTCTATGCCTTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTDPRVH*GLCLPS Trigger: AGATGGAAGGCATAGACCCAAATGCACTCTGGGATC...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS-3UTR CAA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCCAATTACAAAGAGCTaGTCATCAATGACAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCPITKS*SSMTAT Trigger: TGTGGCTGTCATTGATGACAAGCTCTTTGTAATTGG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTCTTATTCCTAAACAGTaGGATGGATGCAGAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCLIPKQ*DGCRSF Trigger: GAAACTTCTGCATCCATCCAACTGTTTAGGAATAAG...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | ATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACACCTTGTTCCATGTATCTGTTTTaGGATCATACCTTTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: IYGGQRTTSGVCPCLTPCSMYLF*DHTFPR Trigger: ACGTGGAAAGGTATGATCCAAAAACAGATACATGGA...ACAAGGTGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTAGCATGGTGAACAGCTaGATAGAATTCTTCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEAKDVKNQILQEKGSGGSMVNS*IEFFGA Trigger: AGCTCCGAAGAATTCTATCAAGCTGTTCACCATGCT...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | ATATATATATATGGAGGTCAGAGGACAACTTCTGGTGTTTGTCCTTGCCTAACATTGATCTCCTCTTGCTaGGCTTCACAGACATCACTT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYGGQRTTSGVCPCLTLISSC*ASQTSL Trigger: AAGTGATGTCTGTGAAGCCAAGCAAGAGGAGATCAA...TGTTAGGCAAGGACAAACACCAGAAGTTGTCCTCTGACCTCCATATATATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTATCTATGCCTTCCATCTaGATCTCCTCTTGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLSMPSI*ISSCLA Trigger: AGCCAAGCAAGAGGAGATCAAGATGGAAGGCATAGA...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | CTTGAGGCAAAAGATGTTAAGAATCAGATATTGCAAGAGAAAGGATCAGGAGGTCCTGAATCCACAGATTaGTTCGGAGGTCATACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEAKDVKNQILQEKGSGGPESTD*FGGHTS Trigger: AGAAGTATGACCTCCGAACAAATCTGTGGATTCAGG...ACCTCCTGATCCTTTCTCTTGCAATATCTGATTCTTAACATCTTTTGCCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | AAACAAAGAAGTCATCATGGGGACATTATTGGGAATGTGTGCTGTGACATGCCTGATCATAGTATTCCATaGAACTCAGACAGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHHGDIIGNVCCDMPDHSIP*NSDRNF Trigger: GAAGTTCCTGTCTGAGTTCAATGGAATACTATGATC...AGGCATGTCACAGCACACATTCCCAATAATGTCCCCATGATGACTTCTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS-3UTR CAA 90 bp | TATTTAACTGTTTCTGATGTATATGGGAATAGAGGCCCAAGTGTGCTTGTGTTAACCTGTATATGCAAATaGAACAAGATCCCAGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLTVSDVYGNRGPSVLVLTCICK*NKIPEC Trigger: GCACTCTGGGATCTTGTTCAATTTGCATATACAGGT...TAACACAAGCACACTTGGGCCTCTATTCCCATATACATCAGAAACAGTTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS GCA 72 bp | CAAAGCTGCCTCCTCCGCTGTCCTGTTGCAGGCAGCTaGCCCCCGCTGGGCTACTGGAGGCCGGCGAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QSCLLRCPVAGS*PPLGYWRPARD Trigger: ATCCCTCGCCGGCCTCCAGTAGCCCAGCGGGGGGCAGCTGCCTGCAACAGGACAGCGGAGGAGGCAGCTTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS TCA 72 bp | CCCCCGCTGGGCTACTGGAGGCCGGCGAGGGATGGCTaGAGAGTTTCCAGCGGAGTCGCAGGATGTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPLGYWRPARDG*RVSSGVAGCAS Trigger: TGAAGCACATCCTGCGACTCCGCTGGAAACTCTTCAGCCATCCCTCGCCGGCCTCCAGTAGCCCAGCGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS GCA 72 bp | GGATGGCTGAAGAGTTTCCAGCGGAGTCGCAGGATGTaGTTCACATCGAAGTCTTTTCTCCCGGAGCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GWLKSFQRSRRM*FTSKSFLPEPD Trigger: GTCCGGCTCCGGGAGAAAAGACTTCGATGTGAAGCACATCCTGCGACTCCGCTGGAAACTCTTCAGCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS CCA 72 bp | TCACCTGTTGCCTGGATAGAGCTGGCAGGCTCCGCTTaGAGCTCTTTCAGGGCCAATCCTTTGTCCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPVAWIELAGSA*SSFRANPLSSG Trigger: ACCAGAGGACAAAGGATTGGCCCTGAAAGAGCTCCAAGCGGAGCCTGCCAGCTCTATCCAGGCAACAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS CCA 72 bp | CATGGCCACCCACTGCATACAGGAAACCATCACAGGTaGCCACTCCAACACCCCCTCTCCTCTTACACATCG | + |
|
Preference number: 6 (lower is better) Translates to: HGHPLHTGNHHR*PLQHPLSSYTS Trigger: CGATGTGTAAGAGGAGAGGGGGTGTTGGAGTGGCCACCTGTGATGGTTTCCTGTATGCAGTGGGTGGCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CAA 72 bp | TTCACCTGTTGCCTGGATAGAGCTGGCAGGCTCCGCTaGGAGCTCTTTCAGGGCCAATCCTTTGTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FTCCLDRAGRLR*ELFQGQSFVLW Trigger: CCAGAGGACAAAGGATTGGCCCTGAAAGAGCTCCAAGCGGAGCCTGCCAGCTCTATCCAGGCAACAGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS CAA 90 bp | ATAGAGCTGGCAGGCTCCGCTTGGAGCTCTTTCAGGGCCAATCCTTaGTCCTCTGGTCCAGAAAAGTCCATGCCTGTCACTACCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IELAGSAWSSFRANP*SSGPEKSMPVTTSS Trigger: GGAGGAGGTAGTGACAGGCATGGACTTTTCTGGACCAGAGGACAAAGGATTGGCCCTGAAAGAGCTCCAAGCGGAGCCTGCCAGCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS TCA 72 bp | CCTTTCCACGTAGTCCAGGAGCCTGGAACAGTGGTTTaGAGCAGGAGCATCATGGCCACCCACTGCATACAG | + |
|
Preference number: 6 (lower is better) Translates to: PFHVVQEPGTVV*SRSIMATHCIQ Trigger: CTGTATGCAGTGGGTGGCCATGATGCTCCTGCTTCAAACCACTGTTCCAGGCTCCTGGACTACGTGGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 72 bp | GATGTCAACCTGTGTCCACATCCTTCACCTGTTGCCTaGATAGAGCTGGCAGGCTCCGCTTGGAGCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DVNLCPHPSPVA*IELAGSAWSSF Trigger: GAAAGAGCTCCAAGCGGAGCCTGCCAGCTCTATCCAGGCAACAGGTGAAGGATGTGGACACAGGTTGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CAA 90 bp | TCCACATCCTTCACCTGTTGCCTGGATAGAGCTGGCAGGCTCCGCTaGGAGCTCTTTCAGGGCCAATCCTTTGTCCTCTGGTCCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: STSFTCCLDRAGRLR*ELFQGQSFVLWSRK Trigger: TTTTCTGGACCAGAGGACAAAGGATTGGCCCTGAAAGAGCTCCAAGCGGAGCCTGCCAGCTCTATCCAGGCAACAGGTGAAGGATGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 72 bp | AGGAGCCTGGAACAGTGGTTTGAAGCAGGAGCATCATaGCCACCCACTGCATACAGGAAACCATCACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSLEQWFEAGAS*PPTAYRKPSQV Trigger: CACCTGTGATGGTTTCCTGTATGCAGTGGGTGGCCATGATGCTCCTGCTTCAAACCACTGTTCCAGGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CAA 72 bp | ACCTTTCCACGTAGTCCAGGAGCCTGGAACAGTGGTTaGAAGCAGGAGCATCATGGCCACCCACTGCATACA | + |
|
Preference number: 6 (lower is better) Translates to: TFPRSPGAWNSG*KQEHHGHPLHT Trigger: TGTATGCAGTGGGTGGCCATGATGCTCCTGCTTCAAACCACTGTTCCAGGCTCCTGGACTACGTGGAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 72 bp | TCGACCCCCAACGGAGTACAACTTTCCATTCAGTGCTaGTACTCCAACCGTGCTCCGAGCAATGGACATACT | + |
|
Preference number: 6 (lower is better) Translates to: STPNGVQLSIQC*YSNRAPSNGHT Trigger: AGTATGTCCATTGCTCGGAGCACGGTTGGAGTAGCAGCACTGAATGGAAAGTTGTACTCCGTTGGGGGTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 72 bp | ATCTCGACCCCCAACGGAGTACAACTTTCCATTCAGTaGTGCTACTCCAACCGTGCTCCGAGCAATGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: ISTPNGVQLSIQ*CYSNRAPSNGH Trigger: ATGTCCATTGCTCGGAGCACGGTTGGAGTAGCAGCACTGAATGGAAAGTTGTACTCCGTTGGGGGTCGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 72 bp | AAGGCAAGGAGCATACTCAGGTCACTACATCTCCGCTaGATGTCATACTTGACCCACATCATCAGTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: KARSILRSLHLR*MSYLTHIISAW Trigger: CCATGCACTGATGATGTGGGTCAAGTATGACATGCAGCGGAGATGTAGTGACCTGAGTATGCTCCTTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 72 bp | TTTTTGGATCATACCTTTCCACGTAGTCCAGGAGCCTaGAACAGTGGTTTGAAGCAGGAGCATCATGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FLDHTFPRSPGA*NSGLKQEHHGH Trigger: GTGGCCATGATGCTCCTGCTTCAAACCACTGTTCCAGGCTCCTGGACTACGTGGAAAGGTATGATCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 72 bp | AGTACAACTTTCCATTCAGTGCTGCTACTCCAACCGTaGTCCGAGCAATGGACATACTGGCTACATATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STTFHSVLLLQP*SEQWTYWLHMS Trigger: GGACATATGTAGCCAGTATGTCCATTGCTCGGAGCACGGTTGGAGTAGCAGCACTGAATGGAAAGTTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS CCA 72 bp | TGGAATCCAAATCACTTTGAGGTGTCAGTGAATGATTaGTCGATGTCAACCTGTGTCCACATCCTTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: WNPNHFEVSVND*SMSTCVHILHL Trigger: CAGGTGAAGGATGTGGACACAGGTTGACATCGACCAATCATTCACTGACACCTCAAAGTGATTTGGATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
||
| CDS GCA 72 bp | CCATGGTGTAGCTGTGTGCCACCTTCATTAATTCAATaGATCCTTGAGCATCAGCAAATGCCCTTATTCCTA | + |
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Preference number: 6 (lower is better) Translates to: PWCSCVPPSLIQ*ILEHQQMPLFL Trigger: TAGGAATAAGGGCATTTGCTGATGCTCAAGGATGCATTGAATTAATGAAGGTGGCACACAGCTACACCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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| CDS CCA 72 bp | TGTATATGCAAATTGAACAAGATCCCAGAGTGCATTTaGGTCTATGCCTTCCATCTTGATCTCCTCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: CICKLNKIPECI*VYAFHLDLLLL Trigger: AAGCAAGAGGAGATCAAGATGGAAGGCATAGACCCAAATGCACTCTGGGATCTTGTTCAATTTGCATATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022666.9 |
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