Pregenerated sensors for KLHDC8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032609Ensembl transcript IDs: ENSMUST00000035232.13, ENSMUST00000193286.6, ENSMUST00000193895.6, ENSMUST00000195435.6
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTAGGTGCCCTCTCCTGTaGCTCCCTCATCCCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RLEAQTFPDWPLEKAWSARCPLL*LPHPTE Trigger: CTCTGTGGGATGAGGGAGGCACAGGAGAGGGCACCT...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAGGAGGTGCCCTCTCCTGTaGCTCCCTCATCCCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: EAQTFPDWPLEKAWSALRRCPLL*LPHPTE Trigger: CTCTGTGGGATGAGGGAGGCACAGGAGAGGGCACCT...CCTAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCTCACAACAGCCCTGTGAGGTAGGTCGGGCAGGAAAGTTTCAGAGATCCCTAAGCTGTAGACCGTaGGGCCAATGCTCTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GSSQQPCEVGRAGKFQRSLSCRP*GQCSAL Trigger: AAGAGCAGAGCATTGGCCTCACGGTCTACAGCTTAG...GGATCTCTGAAACTTTCCTGCCCGACCTACCTCACAGGGCTGTTGTGAGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTAAGCTGTAGACCGTaGGGCCAATGCTCTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RLEAQTFPDWPLEKAWSALSCRP*GQCSAL Trigger: AAGAGCAGAGCATTGGCCTCACGGTCTACAGCTTAG...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTCAGGTGCCCTCTCCTGTaGCTCCCTCATCCCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RCEHVCPMLKTKAPQPKLRCPLL*LPHPTE Trigger: CTCTGTGGGATGAGGGAGGCACAGGAGAGGGCACCT...GAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| 3UTR-3UTR GCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGAGGTGCCCTCTCCTGTaGCTCCCTCATCCCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKRCPLL*LPHPTE Trigger: CTCTGTGGGATGAGGGAGGCACAGGAGAGGGCACCT...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTGCTATGGTTCGTGAGTaGATGGTGATAAAAATAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RLEAQTFPDWPLEKAWSAAMVRE*MVIKIG Trigger: ACCTATTTTTATCACCATCCACTCACGAACCATAGC...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTGTTTCTTCTGTGATTTCCATCCTCAGAATACTCCTGGGGTCCCCAGGAGCTATGGTTCGTGAGTaGATGGTGATAAAAATAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SFVSSVISILRILLGSPGAMVRE*MVIKIG Trigger: ACCTATTTTTATCACCATCCACTCACGAACCATAGC...TCCTGGGGACCCCAGGAGTATTCTGAGGATGGAAATCACAGAAGAAACAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| 3UTR CCA 72 bp | GAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTaGAGAAGGCCTGGTCAGCTCTTAGGGCCTAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: EGWKLRLFQTGH*RRPGQLLGPKL Trigger: CAGCTTAGGCCCTAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| 3UTR TCA 72 bp | TACATCAAAACTCCCTGGGTCCTCACAACAGCCCTGTaGGGTAGGTCGGGCAGGAAAGTTTCAGAGATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YIKTPWVLTTAL*GRSGRKVSEIP Trigger: GGGGATCTCTGAAACTTTCCTGCCCGACCTACCTCACAGGGCTGTTGTGAGGACCCAGGGAGTTTTGATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193286.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACGCCCAGCCTGGAGGCTaGAGCAGGAGCATCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHAQPGG*SRSIGP Trigger: CGGCCCGATGCTCCTGCTCCAGCCTCCAGGCTGGGC...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACCAGTCACTGGGAGCTTaGCCTGGCGGCCCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHQSLGA*PGGPFP Trigger: GGGGAATGGGCCGCCAGGGCAAGCTCCCAGTGACTG...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCGCCCAGCCTGGAGGCTaGAGCAGGAGCATCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPGRLEAQTFPDWPLEKAAQPGG*SRSIGP Trigger: CGGCCCGATGCTCCTGCTCCAGCCTCCAGGCTGGGC...GGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGGCCCAGCCTGGAGGCTaGAGCAGGAGCATCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLQEGWKLRLFQTGHWRRAQPGG*SRSIGP Trigger: CGGCCCGATGCTCCTGCTCCAGCCTCCAGGCTGGGC...CCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGGGAGGCCAAAGGGCATaGCTGGTTCCCAAGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLQEGWKLRLFQTGHWRRGGQRA*LVPKAP Trigger: GGGGGCCTTGGGAACCAGCCATGCCCTTTGGCCTCC...CCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCAGGAACCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGGAGGCCAAAGGGCATaGCTGGTTCCCAAGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGTPPGRLEAQTFPDWPLGGQRA*LVPKAP Trigger: GGGGGCCTTGGGAACCAGCCATGCCCTTTGGCCTCC...CAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGGTTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACCTCCCAGCGTCTCCGTaGAAGACTGAAGCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHLPASP*KTEALH Trigger: GTGGAGAGCTTCAGTCTTGCACGGAGACGCTGGGAG...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGTCCCGTGCAGGAAGGTaGAGGCCCCATAGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLQEGWKLRLFQTGHWRRSRAGR*RPHSRV Trigger: CACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGA...CCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACTTCAAAAGCAGTCACTaGGAGCTTGCCCTGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHFKSSH*ELALAA Trigger: GGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAA...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCGCGACTGGGCAGGCTTaGGTGTCGGGTCCATGTACG | + |
|
Preference number: 4 (lower is better) Translates to: PPGRLEAQTFPDWPLEKAATGQA*VSGPCT Trigger: CGTACATGGACCCGACACCCAAGCCTGCCCAGTCGC...GGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCAGTCGTGGCCCAGCCTaGAGGCTGGAGCAGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: PPGRLEAQTFPDWPLEKASRGPA*RLEQEH Trigger: ATGCTCCTGCTCCAGCCTCCAGGCTGGGCCACGACT...GGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR TCA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACACATCTCCACAGTGTTaGCAAAGTGCGGCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHTSPQC*QSAAGS Trigger: ACTCCCGGCCGCACTTTGTCAACACTGTGGAGATGT...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | GGGTCCTCACAACAGCCCTGTGAGGTAGGTCGGGCAGGAAAGTTTCAGAGATCCGCGACTGGGCAGGCTTaGGTGTCGGGTCCATGTACG | + |
|
Preference number: 4 (lower is better) Translates to: GSSQQPCEVGRAGKFQRSATGQA*VSGPCT Trigger: CGTACATGGACCCGACACCCAAGCCTGCCCAGTCGC...GGATCTCTGAAACTTTCCTGCCCGACCTACCTCACAGGGCTGTTGTGAGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR GCA 90 bp | CCAGGAACCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGCTCCCAGCGTCTCCGTaGAAGACTGAAGCTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGTPPGRLEAQTFPDWPLLPASP*KTEALH Trigger: GTGGAGAGCTTCAGTCTTGCACGGAGACGCTGGGAG...CAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGGTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACAGCAGGTGTCCGTCCTaGTGTGCCACTGTACCATAT | + |
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Preference number: 4 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHSRCPS*CATVPY Trigger: ATATGGTACAGTGGCACACCAGGACGGACACCTGCT...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCCCATAGCAGGGTGTaGGCATGGAGGGTAGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: PLQEGWKLRLFQTGHWRRPHSRV*AWRVAK Trigger: TTTCGCTACCCTCCATGCCCACACCCTGCTATGGGG...CCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR CCA 90 bp | CCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGTTCAAAAGCAGTCACTaGGAGCTTGCCCTGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLQEGWKLRLFQTGHWRRFKSSH*ELALAA Trigger: GGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAA...CCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTTCAAAAGCAGTCACTaGGAGCTTGCCCTGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PPGRLEAQTFPDWPLEKAFKSSH*ELALAA Trigger: GGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAA...GGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGGGAGGCCAAAGGGCATaGCTGGTTCCCAAGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SHGEHPQHQKGARSASIVGGQRA*LVPKAP Trigger: GGGGGCCTTGGGAACCAGCCATGCCCTTTGGCCTCC...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | GAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAGGAGTCGTGGCCCAGCCTaGAGGCTGGAGCAGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: EAQTFPDWPLEKAWSALRSRGPA*RLEQEH Trigger: ATGCTCCTGCTCCAGCCTCCAGGCTGGGCCACGACT...CCTAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | GAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAGGAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EAQTFPDWPLEKAWSALRSRVWA*RVAKAS Trigger: GCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCT...CCTAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAGCGACTGGGCAGGCTTaGGTGTCGGGTCCATGTACG | + |
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Preference number: 4 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLATGQA*VSGPCT Trigger: CGTACATGGACCCGACACCCAAGCCTGCCCAGTCGC...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGGCGACTGGGCAGGCTTaGGTGTCGGGTCCATGTACG | + |
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Preference number: 4 (lower is better) Translates to: SHGEHPQHQKGARSASIVATGQA*VSGPCT Trigger: CGTACATGGACCCGACACCCAAGCCTGCCCAGTCGC...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGGCCCAGCCTGGAGGCTaGAGCAGGAGCATCGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKAQPGG*SRSIGP Trigger: CGGCCCGATGCTCCTGCTCCAGCCTCCAGGCTGGGC...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAAGTCGTGGCCCAGCCTaGAGGCTGGAGCAGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLSRGPA*RLEQEH Trigger: ATGCTCCTGCTCCAGCCTCCAGGCTGGGCCACGACT...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGTTCCACCGCTTGACTTaGGCCCTGAGCCACACCCCC | + |
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Preference number: 4 (lower is better) Translates to: SHGEHPQHQKGARSASIVFHRLT*ALSHTP Trigger: GGGGGTGTGGCTCAGGGCCCAAGTCAAGCGGTGGAA...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTACATCTCCACAGTGTTaGCAAAGTGCGGCCGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RLEAQTFPDWPLEKAWSATSPQC*QSAAGS Trigger: ACTCCCGGCCGCACTTTGTCAACACTGTGGAGATGT...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAGGCTCCCAGCGTCTCCGTaGAAGACTGAAGCTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EAQTFPDWPLEKAWSALRLPASP*KTEALH Trigger: GTGGAGAGCTTCAGTCTTGCACGGAGACGCTGGGAG...CCTAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | CCAGGAACCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGAGCAGGTGTCCGTCCTaGTGTGCCACTGTACCATAT | + |
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Preference number: 4 (lower is better) Translates to: PGTPPGRLEAQTFPDWPLSRCPS*CATVPY Trigger: ATATGGTACAGTGGCACACCAGGACGGACACCTGCT...CAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGGTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTCCACAGCAGCTACTaGGCTTTGGACTTCGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLEAQTFPDWPLEKAWSALHSSY*ALDFVH Trigger: GTGGACGAAGTCCAAAGCCCAGTAGCTGCTGTGGAG...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLSRVWA*RVAKAS Trigger: GCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCT...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR CCA 90 bp | AGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTCTCCCGTGCAGGAAGGTaGAGGCCCCATAGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCEHVCPMLKTKAPQPKLSRAGR*RPHSRV Trigger: CACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGA...GAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR CCA 90 bp | AGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTCTTCCACCGCTTGACTTaGGCCCTGAGCCACACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCEHVCPMLKTKAPQPKLFHRLT*ALSHTP Trigger: GGGGGTGTGGCTCAGGGCCCAAGTCAAGCGGTGGAA...GAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCCTACCACTAGCACCTaGTTACCCAGAACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLEAQTFPDWPLEKAWSAPTTST*LPRTTA Trigger: TGCTGTGGTTCTGGGTAAGCAGGTGCTAGTGGTAGG...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | GGGTCCTCACAACAGCCCTGTGAGGTAGGTCGGGCAGGAAAGTTTCAGAGATCCCCTACCACTAGCACCTaGTTACCCAGAACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSQQPCEVGRAGKFQRSPTTST*LPRTTA Trigger: TGCTGTGGTTCTGGGTAAGCAGGTGCTAGTGGTAGG...GGATCTCTGAAACTTTCCTGCCCGACCTACCTCACAGGGCTGTTGTGAGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR GCA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTACTCCCAGCGTCTCCGTaGAAGACTGAAGCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLLPASP*KTEALH Trigger: GTGGAGAGCTTCAGTCTTGCACGGAGACGCTGGGAG...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTAGCAGGTGTCCGTCCTaGTGTGCCACTGTACCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RLEAQTFPDWPLEKAWSASRCPS*CATVPY Trigger: ATATGGTACAGTGGCACACCAGGACGGACACCTGCT...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGCCCCATAGCAGGGTGTaGGCATGGAGGGTAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHGEHPQHQKGARSASIVPHSRV*AWRVAK Trigger: TTTCGCTACCCTCCATGCCCACACCCTGCTATGGGG...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTAATAACAAACAGTCGTaGCCCAGCCTGGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLEAQTFPDWPLEKAWSANNKQS*PSLEAG Trigger: TCCAGCCTCCAGGCTGGGCCACGACTGTTTGTTATT...AGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR TCA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAACATCTCCACAGTGTTaGCAAAGTGCGGCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLTSPQC*QSAAGS Trigger: ACTCCCGGCCGCACTTTGTCAACACTGTGGAGATGT...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | GGGTCCTCACAACAGCCCTGTGAGGTAGGTCGGGCAGGAAAGTTTCAGAGATCCTTAGTCCAGGAGCCATaGTCCAGGTCAAACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSQQPCEVGRAGKFQRSLVQEP*SRSNIS Trigger: GGAGATGTTTGACCTGGAGCATGGCTCCTGGACTAA...GGATCTCTGAAACTTTCCTGCCCGACCTACCTCACAGGGCTGTTGTGAGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGTCCCGTGCAGGAAGGTaGAGGCCCCATAGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKSRAGR*RPHSRV Trigger: CACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGA...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGAGTCGTGGCCCAGCCTaGAGGCTGGAGCAGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKSRGPA*RLEQEH Trigger: ATGCTCCTGCTCCAGCCTCCAGGCTGGGCCACGACT...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | TCCTTTGTTTCTTCTGTGATTTCCATCCTCAGAATACTCCTGGGGTCCCCAGGATTCCACCGCTTGACTTaGGCCCTGAGCCACACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFVSSVISILRILLGSPGFHRLT*ALSHTP Trigger: GGGGGTGTGGCTCAGGGCCCAAGTCAAGCGGTGGAA...TCCTGGGGACCCCAGGAGTATTCTGAGGATGGAAATCACAGAAGAAACAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAAGCAGGTGTCCGTCCTaGTGTGCCACTGTACCATAT | + |
|
Preference number: 4 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLSRCPS*CATVPY Trigger: ATATGGTACAGTGGCACACCAGGACGGACACCTGCT...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKSRVWA*RVAKAS Trigger: GCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCT...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR GCA 90 bp | TCCTTTGTTTCTTCTGTGATTTCCATCCTCAGAATACTCCTGGGGTCCCCAGGAAGCCAGCAAAAGCTCTaGGACTGGGCAGGCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFVSSVISILRILLGSPGSQQKL*DWAGLG Trigger: ACCCAAGCCTGCCCAGTCGCAGAGCTTTTGCTGGCT...TCCTGGGGACCCCAGGAGTATTCTGAGGATGGAAATCACAGAAGAAACAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGTTAGTCCAGGAGCCATaGTCCAGGTCAAACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHGEHPQHQKGARSASIVLVQEP*SRSNIS Trigger: GGAGATGTTTGACCTGGAGCATGGCTCCTGGACTAA...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCCCCATAGCAGGGTGTaGGCATGGAGGGTAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKPHSRV*AWRVAK Trigger: TTTCGCTACCCTCCATGCCCACACCCTGCTATGGGG...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGTTCAAAAGCAGTCACTaGGAGCTTGCCCTGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKFKSSH*ELALAA Trigger: GGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAA...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTCAATAACAAACAGTCGTaGCCCAGCCTGGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCEHVCPMLKTKAPQPKLNNKQS*PSLEAG Trigger: TCCAGCCTCCAGGCTGGGCCACGACTGTTTGTTATT...GAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR TCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGACATCTCCACAGTGTTaGCAAAGTGCGGCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKTSPQC*QSAAGS Trigger: ACTCCCGGCCGCACTTTGTCAACACTGTGGAGATGT...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCCTACCACTAGCACCTaGTTACCCAGAACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKPTTST*LPRTTA Trigger: TGCTGTGGTTCTGGGTAAGCAGGTGCTAGTGGTAGG...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | TCCTTTGTTTCTTCTGTGATTTCCATCCTCAGAATACTCCTGGGGTCCCCAGGACCTACCACTAGCACCTaGTTACCCAGAACCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFVSSVISILRILLGSPGPTTST*LPRTTA Trigger: TGCTGTGGTTCTGGGTAAGCAGGTGCTAGTGGTAGG...TCCTGGGGACCCCAGGAGTATTCTGAGGATGGAAATCACAGAAGAAACAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | TCCTTTGTTTCTTCTGTGATTTCCATCCTCAGAATACTCCTGGGGTCCCCAGGAAATAACAAACAGTCGTaGCCCAGCCTGGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFVSSVISILRILLGSPGNNKQS*PSLEAG Trigger: TCCAGCCTCCAGGCTGGGCCACGACTGTTTGTTATT...TCCTGGGGACCCCAGGAGTATTCTGAGGATGGAAATCACAGAAGAAACAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGAATAACAAACAGTCGTaGCCCAGCCTGGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKNNKQS*PSLEAG Trigger: TCCAGCCTCCAGGCTGGGCCACGACTGTTTGTTATT...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | TCCTTTGTTTCTTCTGTGATTTCCATCCTCAGAATACTCCTGGGGTCCCCAGGATTAGTCCAGGAGCCATaGTCCAGGTCAAACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFVSSVISILRILLGSPGLVQEP*SRSNIS Trigger: GGAGATGTTTGACCTGGAGCATGGCTCCTGGACTAA...TCCTGGGGACCCCAGGAGTATTCTGAGGATGGAAATCACAGAAGAAACAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR GCA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGTTAGTCCAGGAGCCATaGTCCAGGTCAAACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKLVQEP*SRSNIS Trigger: GGAGATGTTTGACCTGGAGCATGGCTCCTGGACTAA...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS GCA 90 bp | GCTACTGGGCTTTGGACTTCGTCCACGCCGCCTACCACTAGCACCTaGTTACCCAGAACCACAGCAGCGGCACCAGCCCGGGCAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATGLWTSSTPPTTST*LPRTTAAAPARAVG Trigger: GCCCACTGCCCGGGCTGGTGCCGCTGCTGTGGTTCTGGGTAAGCAGGTGCTAGTGGTAGGCGGCGTGGACGAAGTCCAAAGCCCAGTAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS TCA 90 bp | TACACCATACCATCTCTCTCCACAGTCGCAACACCCATGGCCGCTTaGGGGAGGGTAGCCCGGCGCTCCCAGCGGCCTTCGTCAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTIPSLSTVATPMAA*GRVARRSQRPSSAK Trigger: CTTGGCTGACGAAGGCCGCTGGGAGCGCCGGGCTACCCTCCCTCAAGCGGCCATGGGTGTTGCGACTGTGGAGAGAGATGGTATGGTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 90 bp | TGTTCCCGTGCAGGAAGGTGGAGGCCCCATAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGCAGTCCCGGCGGGGCTCATATACCA | + |
|
Preference number: 5 (lower is better) Translates to: CSRAGRWRPHSRVWA*RVAKASSPGGAHIP Trigger: TGGTATATGAGCCCCGCCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS CCA 90 bp | AGATCTTGTTCCCGTGCAGGAAGGTGGAGGCCCCATAGCAGGGTGTaGGCATGGAGGGTAGCGAAAGCCAGCAGTCCCGGCGGGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSCSRAGRWRPHSRV*AWRVAKASSPGGAH Trigger: ATGAGCCCCGCCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACAAGATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS CCA 90 bp | CGCTTGACTTGGGCCCTGAGCCACACCCCCAATAACAAACAGTCGTaGCCCAGCCTGGAGGCTGGAGCAGGAGCATCGGGCCGTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLTWALSHTPNNKQS*PSLEAGAGASGRRH Trigger: ATGCCTACGGCCCGATGCTCCTGCTCCAGCCTCCAGGCTGGGCCACGACTGTTTGTTATTGGGGGTGTGGCTCAGGGCCCAAGTCAAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACAGCAGCTACTGGGCTTaGGACTTCGTCCACGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHSSYWA*DFVHAA Trigger: GGCGGCGTGGACGAAGTCCAAAGCCCAGTAGCTGCT...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 90 bp | TCCGTCCTGGTGTGCCACTGTACCATATACCCGGCAAGTCGGCATTaGGGGGAACACCTGCCAAGCAAAGGCCCGACCACCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLVCHCTIYPASRH*GEHLPSKGPTTSCS Trigger: GCTGCAGGAGGTGGTCGGGCCTTTGCTTGGCAGGTGTTCCCCCCAATGCCGACTTGCCGGGTATATGGTACAGTGGCACACCAGGACGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 90 bp | CCTGGCGGCCTCCCAAGACATAGATCTTGTTCCCGTGCAGGAAGGTaGAGGCCCCATAGCAGGGTGTGGGCATGGAGGGTAGCGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGGLPRHRSCSRAGR*RPHSRVWAWRVAKA Trigger: GGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACAAGATCTATGTCTTGGGAGGCCGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR CAA 90 bp | CCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCTTCCACCGCTTGACTaGGGCCCTGAGCCACACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLQEGWKLRLFQTGHWRRLPPLD*GPEPHP Trigger: GGGGTGTGGCTCAGGGCCCAAGTCAAGCGGTGGAAG...CCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCAGCAGCTACTGGGCTTaGGACTTCGTCCACGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPGRLEAQTFPDWPLEKASSYWA*DFVHAA Trigger: GGCGGCGTGGACGAAGTCCAAAGCCCAGTAGCTGCT...GGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | GGGTCCTCACAACAGCCCTGTGAGGTAGGTCGGGCAGGAAAGTTTCAGAGATCCCTTCCACCGCTTGACTaGGGCCCTGAGCCACACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSQQPCEVGRAGKFQRSLPPLD*GPEPHP Trigger: GGGGTGTGGCTCAGGGCCCAAGTCAAGCGGTGGAAG...GGATCTCTGAAACTTTCCTGCCCGACCTACCTCACAGGGCTGTTGTGAGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 |
||
| CDS-3UTR CAA 90 bp | GAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAGGGCAGTCACTGGGAGCTaGCCCTGGCGGCCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAQTFPDWPLEKAWSALRAVTGS*PWRPIP Trigger: GGGAATGGGCCGCCAGGGCAAGCTCCCAGTGACTGC...CCTAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195435.6 |
||
| CDS-3UTR CAA 90 bp | CAAGCTCCTGAGGCGGTAACTCAGGTGCCCTCTCCTGTGCCTCCCTCATCCCACAACATCTCCACAGTGTaGACAAAGTGCGGCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAPEAVTQVPSPVPPSSHNISTV*TKCGRE Trigger: CTCCCGGCCGCACTTTGTCAACACTGTGGAGATGTT...GTGGGATGAGGGAGGCACAGGAGAGGGCACCTGAGTTACCGCCTCAGGAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
||
| CDS-3UTR CAA 90 bp | CCAGGAACCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGCCAATAGCCACAATGTaGCCCCCAAGGGAGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PGTPPGRLEAQTFPDWPLPIATM*PPREPT Trigger: GGTTGGCTCCCTTGGGGGCAACATTGTGGCTATTGG...CAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGGTTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAAGCAGCTACTGGGCTTaGGACTTCGTCCACGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLSSYWA*DFVHAA Trigger: GGCGGCGTGGACGAAGTCCAAAGCCCAGTAGCTGCT...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTATGCGACTGGGCAGGCTaGGGTGTCGGGTCCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLCDWAG*GVGSMY Trigger: GTACATGGACCCGACACCCAAGCCTGCCCAGTCGCA...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | CCAGGAACCCCTCCAGGAAGGCTGGAAGCTCAGACTTTTCCAGACTGGCCACTGAACATCTCCACAGTGTaGACAAAGTGCGGCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGTPPGRLEAQTFPDWPLNISTV*TKCGRE Trigger: CTCCCGGCCGCACTTTGTCAACACTGTGGAGATGTT...CAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCAGCCTTCCTGGAGGGGTTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | AGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTCAGCAGCTACTGGGCTTaGGACTTCGTCCACGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RCEHVCPMLKTKAPQPKLSSYWA*DFVHAA Trigger: GGCGGCGTGGACGAAGTCCAAAGCCCAGTAGCTGCT...GAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 90 bp | TTCGGCCATAGCACAGCCAGCAAAAGCTCTGCGACTGGGCAGGCTTaGGTGTCGGGTCCATGTACGGGTCTCCAGATCAAAAGCTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: FGHSTASKSSATGQA*VSGPCTGLQIKSFK Trigger: TTTGAAGCTTTTGATCTGGAGACCCGTACATGGACCCGACACCCAAGCCTGCCCAGTCGCAGAGCTTTTGCTGGCTGTGCTATGGCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGCCAATAGCCACAATGTaGCCCCCAAGGGAGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: SHGEHPQHQKGARSASIVPIATM*PPREPT Trigger: GGTTGGCTCCCTTGGGGGCAACATTGTGGCTATTGG...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | AATAGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTTCCACCGCTTGACTaGGGCCCTGAGCCACACCCC | + |
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Preference number: 5 (lower is better) Translates to: NRCEHVCPMLKTKAPQPKLPPLD*GPEPHP Trigger: GGGGTGTGGCTCAGGGCCCAAGTCAAGCGGTGGAAG...CTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 90 bp | GGTCCATGTACGGGTCTCCAGATCAAAAGCTTCAAAAGCAGTCACTaGGAGCTTGCCCTGGCGGCCTCCCAAGACATAGATCTTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GPCTGLQIKSFKSSH*ELALAASQDIDLVP Trigger: GGGAACAAGATCTATGTCTTGGGAGGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAAGCTTTTGATCTGGAGACCCGTACATGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS-3UTR CAA 90 bp | TGGAAGCTCAGACTTTTCCAGACTGGCCACTGGAGAAGGCCTGGTCAGCTCTTAAACATCTCCACAGTGTaGACAAAGTGCGGCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: WKLRLFQTGHWRRPGQLLNISTV*TKCGRE Trigger: CTCCCGGCCGCACTTTGTCAACACTGTGGAGATGTT...TAAGAGCTGACCAGGCCTTCTCCAGTGGCCAGTCTGGAAAAGTCTGAGCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | AGCCATGGGGAGCACCCTCAGCATCAAAAAGGAGCCCGATCTGCTTCTATAGTGAACATCTCCACAGTGTaGACAAAGTGCGGCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SHGEHPQHQKGARSASIVNISTV*TKCGRE Trigger: CTCCCGGCCGCACTTTGTCAACACTGTGGAGATGTT...CACTATAGAAGCAGATCGGGCTCCTTTTTGATGCTGAGGGTGCTCCCCATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS-3UTR CAA 90 bp | AGGTGTGAGCATGTGTGTCCTATGCTAAAGACAAAGGCTCCCCAACCCAAGCTCCCAATAGCCACAATGTaGCCCCCAAGGGAGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: RCEHVCPMLKTKAPQPKLPIATM*PPREPT Trigger: GGTTGGCTCCCTTGGGGGCAACATTGTGGCTATTGG...GAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCATAGGACACACATGCTCACACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 72 bp | GCAGGAAGGTGGAGGCCCCATAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGCAGTCCCGGCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGRWRPHSRVWA*RVAKASSPGGA Trigger: AGCCCCGCCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS CAA 72 bp | ACCATCTCTCTCCACAGTCGCAACACCCATGGCCGCTaGAGGGAGGGTAGCCCGGCGCTCCCAGCGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TISLHSRNTHGR*REGSPALPAAF Trigger: GAAGGCCGCTGGGAGCGCCGGGCTACCCTCCCTCAAGCGGCCATGGGTGTTGCGACTGTGGAGAGAGATGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS GCA 72 bp | CGTAGGCATGGCAGGCAGCACCTCCCAGCGTCTCCGTaGAAGACTGAAGCTCTCCACGGAGGCCAAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRHGRQHLPASP*KTEALHGGQRA Trigger: TGCCCTTTGGCCTCCGTGGAGAGCTTCAGTCTTGCACGGAGACGCTGGGAGGTGCTGCCTGCCATGCCTACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 72 bp | GCCACACCCCCAATAACAAACAGTCGTGGCCCAGCCTaGAGGCTGGAGCAGGAGCATCGGGCCGTAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: ATPPITNSRGPA*RLEQEHRAVGM Trigger: CATGCCTACGGCCCGATGCTCCTGCTCCAGCCTCCAGGCTGGGCCACGACTGTTTGTTATTGGGGGTGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CAA 90 bp | ATACACCATACCATCTCTCTCCACAGTCGCAACACCCATGGCCGCTaGAGGGAGGGTAGCCCGGCGCTCCCAGCGGCCTTCGTCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: IHHTISLHSRNTHGR*REGSPALPAAFVSQ Trigger: TTGGCTGACGAAGGCCGCTGGGAGCGCCGGGCTACCCTCCCTCAAGCGGCCATGGGTGTTGCGACTGTGGAGAGAGATGGTATGGTGTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 72 bp | GTGTGCCACTGTACCATATACCCGGCAAGTCGGCATTaGGGGGAACACCTGCCAAGCAAAGGCCCGACCACC | + |
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Preference number: 6 (lower is better) Translates to: VCHCTIYPASRH*GEHLPSKGPTT Trigger: GGTGGTCGGGCCTTTGCTTGGCAGGTGTTCCCCCCAATGCCGACTTGCCGGGTATATGGTACAGTGGCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 72 bp | CTCCCAAGACATAGATCTTGTTCCCGTGCAGGAAGGTaGAGGCCCCATAGCAGGGTGTGGGCATGGAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LPRHRSCSRAGR*RPHSRVWAWRV Trigger: TACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACAAGATCTATGTCTTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS CCA 72 bp | AGCACAGCCAGCAAAAGCTCTGCGACTGGGCAGGCTTaGGTGTCGGGTCCATGTACGGGTCTCCAGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: STASKSSATGQA*VSGPCTGLQIK Trigger: TTTGATCTGGAGACCCGTACATGGACCCGACACCCAAGCCTGCCCAGTCGCAGAGCTTTTGCTGGCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS GCA 72 bp | ATCCGCAGGCTACGAGGCAGCTTAGTCCAGGAGCCATaGTCCAGGTCAAACATCTCCACAGTGTTGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: IRRLRGSLVQEP*SRSNISTVLTK Trigger: CTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGCTCCTGGACTAAGCTGCCTCGTAGCCTGCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 ENSMUST00000195435.6 |
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| CDS CCA 72 bp | ACGGGTCTCCAGATCAAAAGCTTCAAAAGCAGTCACTaGGAGCTTGCCCTGGCGGCCTCCCAAGACATAGAT | + |
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Preference number: 6 (lower is better) Translates to: TGLQIKSFKSSH*ELALAASQDID Trigger: ATCTATGTCTTGGGAGGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAAGCTTTTGATCTGGAGACCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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| CDS GCA 72 bp | CCAGATCAAAAGCTTCAAAAGCAGTCACTGGGAGCTTaGCCTGGCGGCCTCCCAAGACATAGATCTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PDQKLQKQSLGA*PGGLPRHRSCS Trigger: GGAACAAGATCTATGTCTTGGGAGGCCGCCAGGGCAAGCTCCCAGTGACTGCTTTTGAAGCTTTTGATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035232.13 ENSMUST00000193286.6 ENSMUST00000193895.6 |
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