Pregenerated sensors for KLHDC8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042115Ensembl transcript IDs: ENSMUST00000046071.5
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGAGATGGGGAAGGACAACAAGGATCTCCCTCTGGGTGGCAATaGCCTCCACCTCACGAGGTAGACGAGAGGAGGGAACTTTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: LRDGEGQQGSPSGWQ*PPPHEVDERRELCP Trigger: AGGGCAAAGTTCCCTCCTCTCGTCTACCTCGTGAGGTGGAGGGCATTGCCACCCAGAGGGAGATCCTTGTTGTCCTTCCCCATCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 90 bp | GGGCTTCCCTCACCCCTCACTGAGGTATCCCTAGTCTTCCCACAATaGACCTTGGGCAGGGGTGACCCTAACAGATACCAGCTCCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GLPSPLTEVSLVFPQ*TLGRGDPNRYQLQL Trigger: AAGCTGGAGCTGGTATCTGTTAGGGTCACCCCTGCCCAAGGTCCATTGTGGGAAGACTAGGGATACCTCAGTGAGGGGTGAGGGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR TCA 90 bp | GAGTCAGCTCTGCTTTCTGAGAGTGCAGGGTTAGAGAGAGGTCACTaGGAGCCCCAGGGCTTGACCTCTCTGTCTCTTCACAGGAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: ESALLSESAGLERGH*EPQGLTSLSLHRSR Trigger: CCTACTCCTGTGAAGAGACAGAGAGGTCAAGCCCTGGGGCTCTCAGTGACCTCTCTCTAACCCTGCACTCTCAGAAAGCAGAGCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR TCA 90 bp | AGGTGGCCAATGGGTCCCTCTTTCTCGGGAGAACACGGTGGGAGATaGTCTCATGGGGTTTTCTATCTACAAACCAGGACCCTCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RWPMGPSFSGEHGGR*SHGVFYLQTRTLLP Trigger: AGGCAGGAGGGTCCTGGTTTGTAGATAGAAAACCCCATGAGATCATCTCCCACCGTGTTCTCCCGAGAAAGAGGGACCCATTGGCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 90 bp | AACTGGTTGGTTTTCTCTTTGAGCTCTTTGAGAGTGGGACAGCTGTaGCCTAGGGAAGGTAGCACTCTTCAAGAGCAGGTGGCCAATGGG | + |
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Preference number: 1 (lower is better) Translates to: NWLVFSLSSLRVGQL*PREGSTLQEQVANG Trigger: CCCATTGGCCACCTGCTCTTGAAGAGTGCTACCTTCCCTAGGCCACAGCTGTCCCACTCTCAAAGAGCTCAAAGAGAAAACCAACCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 90 bp | GGCAGAATACAGAAGATATTGACACTCCATCATCACATGCCCAACTaGGACCTGAGAGGAAGAGTCTCTTCTGCCAAAGCTGTTGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GRIQKILTLHHHMPN*DLRGRVSSAKAVGL Trigger: CAGGCCAACAGCTTTGGCAGAAGAGACTCTTCCTCTCAGGTCCCAGTTGGGCATGTGATGATGGAGTGTCAATATCTTCTGTATTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 90 bp | TTCTTCATTAGTTTATCTCTCACGACACTCAAACTACCTCAGAGATaGGGAAGGACAACAAGGATCTCCCTCTGGGTGGCAATGCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: FFISLSLTTLKLPQR*GRTTRISLWVAMPS Trigger: GGAGGGCATTGCCACCCAGAGGGAGATCCTTGTTGTCCTTCCCCATCTCTGAGGTAGTTTGAGTGTCGTGAGAGATAAACTAATGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 90 bp | AAGGATCCAATTCTATCCTCAGATGTGGTATGGCTTGGCTCCTCTTaGGTTGGGAATGATATGGGCAGGACAGAAGTAGAGGTTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: KDPILSSDVVWLGSS*VGNDMGRTEVEVGK Trigger: CTTTCCAACCTCTACTTCTGTCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTGAGGATAGAATTGGATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 90 bp | CAACCTTGGCCAAACATATGTGTGCGTACCAAGAGAAGGAAAAACTaGTTGGTTTTCTCTTTGAGCTCTTTGAGAGTGGGACAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: QPWPNICVRTKRRKN*LVFSLSSLRVGQLW Trigger: CCACAGCTGTCCCACTCTCAAAGAGCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTTTGGCCAAGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | GACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGAGGCCTAGTCTTCCCACAATaGACCTTGGGCAGGGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: DWELRRVRDLLKGVVRGGLVFPQ*TLGRGD Trigger: GTCACCCCTGCCCAAGGTCCATTGTGGGAAGACTAG...GCCTCCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR GCA 90 bp | GACAGACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGGAGAGGAGGGAACTTTaGCCTGCTGTGTCTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DRLGTQEGKGPSEGCGEGERREL*PAVSEH Trigger: GTGCTCAGACACAGCAGGGCAAAGTTCCCTCCTCTC...CCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | GACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGAGGCCATCACATGCCCAACTaGGACCTGAGAGGAAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: DWELRRVRDLLKGVVRGGHHMPN*DLRGRV Trigger: GACTCTTCCTCTCAGGTCCCAGTTGGGCATGTGATG...GCCTCCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTGTGAGCCCCCAGCTTCCTTCCTACACAACTGCCCTAGCTTCAAGTGCAGAGAGCCCCAGGGCTTaGCCTCTCTGTCTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: WCVSPQLPSYTTALASSAESPRA*PLCLFT Trigger: TGTGAAGAGACAGAGAGGTCAAGCCCTGGGGCTCTC...TGCACTTGAAGCTAGGGCAGTTGTGTAGGAAGGAAGCTGGGGGCTCACACACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | GACAGACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGAGGCAATTAATCACCTaGGCCCTGCCTCTTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: DRLGTQEGKGPSEGCGEGRQLIT*ALPLPQ Trigger: CTGTGGAAGAGGCAGGGCTCAGGTGATTAATTGCCT...CCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCACAAAGAGCTGCTGTGTAGGCCAAAGGGAAGGCACATCCATCCATCCTTGTTGGCCTGGTGTGTaGGCCCCCAGCTTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSTKSCCVGQREGTSIHPCWPGV*APSFLP Trigger: AGGAAGGAAGCTGGGGGCTCACACACCAGGCCAACA...AGGATGGATGGATGTGCCTTCCCTTTGGCCTACACAGCAGCTCTTTGTGCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGACCCTCCTGCCTTGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGATGCCTGCCCAACTGGGACCTaGGAGGAAGAGTCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QDPPALSPGSKEDRDKDACPTGT*EEESLL Trigger: CAGAAGAGACTCTTCCTCTCAGGTCCCAGTTGGGCA...GGCATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGGGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | CAGATGTGGTATGGCTTGGCTCCTCTTGGGTTGGGAATGATATGGGCAGGACAGTGTTGGGACACAGAGTaGCCAGGCCTCAGGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QMWYGLAPLGLGMIWAGQCWDTE*PGLRSG Trigger: TCCTGACCTGAGGCCTGGCCACTCTGTGTCCCAACA...CTGTCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCTGAGTCTCATTATGTTGCCCAGCTGGGCATCAACCCCCTCCTGTGCTCAGTTGCCCTGCTGTGTCTaGGCACTGAGTGAAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLSLIMLPSWASTPSCAQLPCCV*ALSEAS Trigger: AGAAGCTTCACTCAGTGCTCAGACACAGCAGGGCAA...CTGAGCACAGGAGGGGGTTGATGCCCAGCTGGGCAACATAATGAGACTCAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGCTCCCTCTGAGATGTGAGGCATATAGAACCACACGTTTTAACACAGACGGATCTCCCTCTGGGTaGCAATGCCCTCCACCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AVLPLRCEAYRTTRFNTDGSPSG*QCPPPH Trigger: GTGAGGTGGAGGGCATTGCCACCCAGAGGGAGATCC...GTCTGTGTTAAAACGTGTGGTTCTATATGCCTCACATCTCAGAGGGAGCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR GCA 90 bp | GACAGACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGGGCCAAACATATGTGTaGGTACCAAGAGAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: DRLGTQEGKGPSEGCGEGGQTYV*VPREGK Trigger: TTTTCCTTCTCTTGGTACGCACACATATGTTTGGCC...CCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTCTGTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAAAGCTGTTGGCCTGGTGTGTGAGCCCCCAGCTTCCTTCCTACACAACTAAACTACCTCAGAGATaGGGAAGGACAACAAGGATC | + |
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Preference number: 2 (lower is better) Translates to: LPKLLAWCVSPQLPSYTTKLPQR*GRTTRI Trigger: GATCCTTGTTGTCCTTCCCCATCTCTGAGGTAGTTT...AGTTGTGTAGGAAGGAAGCTGGGGGCTCACACACCAGGCCAACAGCTTTGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | TCGTTGGCTGTGCTCCCTCTGAGATGTGAGGCATATAGAACCACACGTTTTAACAGAGCAGGTGGCCAATaGGTCCCTCTTTCTCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLAVLPLRCEAYRTTRFNRAGGQ*VPLSRE Trigger: CTCCCGAGAAAGAGGGACCCATTGGCCACCTGCTCT...GTTAAAACGTGTGGTTCTATATGCCTCACATCTCAGAGGGAGCACAGCCAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | AACTCAGAGCTAGTTCAGTTTGCTTTCTGTGCTGAGGATGGGACTCAGGTCCCTCACGCAGAAACACTCTaGGAGCTGTTGGGACACAGA | + |
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Preference number: 2 (lower is better) Translates to: NSELVQFAFCAEDGTQVPHAETL*ELLGHR Trigger: TCTGTGTCCCAACAGCTCTCAGAGTGTTTCTGCGTG...AGGGACCTGAGTCCCATCCTCAGCACAGAAAGCAAACTGAACTAGCTCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGCTCCCTCTGAGATGTGAGGCATATAGAACCACACGTTTTAACACAGACTTCCTGATAGGTAGGTaGGATCTGGGGCAGGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: AVLPLRCEAYRTTRFNTDFLIGR*DLGQVY Trigger: GTAGACCTGCCCCAGATCTCACCTACCTATCAGGAA...GTCTGTGTTAAAACGTGTGGTTCTATATGCCTCACATCTCAGAGGGAGCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCACAAAGAGCTGCTGTGTAGGCCAAAGGGAAGGCACATCCATCCATCCTTCCTTCCTACACAACTaGCCTAGCTTCAAGTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSTKSCCVGQREGTSIHPSFLHN*PSFKCN Trigger: ATTGCACTTGAAGCTAGGGCAGTTGTGTAGGAAGGA...AGGATGGATGGATGTGCCTTCCCTTTGGCCTACACAGCAGCTCTTTGTGCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAAGACAGGGATAAAGATGCCAATTGTTGTGCTGCTGTTATTAACCGGACCAAAGCTGTTGGCCTaGTGTGTGAGCCCCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PKKTGIKMPIVVLLLLTGPKLLA*CVSPQL Trigger: AAGCTGGGGGCTCACACACCAGGCCAACAGCTTTGG...TCCGGTTAATAACAGCAGCACAACAATTGGCATCTTTATCCCTGTCTTCTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTATCCTCAGATGTGGTATGGCTTGGCTCCTCTTGGGTTGGGAATGATATGCTCTTCAAGAGCAGGTaGCCAATGGGTCCCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ILSSDVVWLGSSWVGNDMLFKSR*PMGPSF Trigger: GAAAGAGGGACCCATTGGCCACCTGCTCTTGAAGAG...CATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTGAGGATAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCATTATTCTTGGTGTCCTCAGGGCTAACTCAGAGCTAGTTCAGTTTGCTTCCTCATGTCAGGATTaGAGTGATGCTGACCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GVIILGVLRANSELVQFASSCQD*SDADQA Trigger: TGCCTGGTCAGCATCACTCCAATCCTGACATGAGGA...AGCAAACTGAACTAGCTCTGAGTTAGCCCTGAGGACACCAAGAATAATGACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | AACATATGTGTGCGTACCAAGAGAAGGAAAAACTGGTTGGTTTTCTCTTTGAGCACAAGGATCTCCCTCTaGGTGGCAATGCCCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: NICVRTKRRKNWLVFSLSTRISL*VAMPST Trigger: GGTGGAGGGCATTGCCACCCAGAGGGAGATCCTTGT...GCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGAATTTACTATGTACACCAGGCTGGCCTCAAACTTACAGAGATCCCCCTAGAGAAACAAGGGATTaGGGGTGCCCTGTTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SWNLLCTPGWPQTYRDPPRETRD*GCPVLH Trigger: ATGAAGAACAGGGCACCCCCAATCCCTTGTTTCTCT...AGGGGGATCTCTGTAAGTTTGAGGCCAGCCTGGTGTACATAGTAAATTCCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CAA 90 bp | ATGATCTCATGGGGTTTTCTATCTACAAACCAGGACCCTCCTGCCTaGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGATGCCAATTGT | + |
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Preference number: 2 (lower is better) Translates to: MISWGFLSTNQDPPA*SPGSKEDRDKDANC Trigger: ACAATTGGCATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGGGTCCTGGTTTGTAGATAGAAAACCCCATGAGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGAATTGATCAAGGTTAGACATGGGTATAACCTAGAAAAGATTGAATGGTCATTAGAGAGAGGTCACTaGGAGCCCCAGGGCTTGACC | + |
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Preference number: 2 (lower is better) Translates to: AELIKVRHGYNLEKIEWSLERGH*EPQGLT Trigger: GGTCAAGCCCTGGGGCTCTCAGTGACCTCTCTCTAA...TGACCATTCAATCTTTTCTAGGTTATACCCATGTCTAACCTTGATCAATTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGTTTCTGACTCTGGAAGTCTGAGTCTCATTATGTTGCCCAGCTGGGCATCAGAATACAGAAGATATTaGCACTCCATCATCACATGC | + |
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Preference number: 2 (lower is better) Translates to: PVSDSGSLSLIMLPSWASEYRRY*HSIITC Trigger: GCATGTGATGATGGAGTGTCAATATCTTCTGTATTC...TGATGCCCAGCTGGGCAACATAATGAGACTCAGACTTCCAGAGTCAGAAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGCCTTGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGATGCCAATTGTCAGTTGACTTCTATATaGGGAATGGATGTCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: PPALSPGSKEDRDKDANCQLTSI*GMDVNQ Trigger: TTGGTTGACATCCATTCCCCATATAGAAGTCAACTG...ACAATTGGCATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR GCA 90 bp | GACTTCTATATGGGGAATGGATGTCAACCAAAGAGAAACAAGGGATTGGGGGTGGGAAGTAGTCCAAACTaGTTTGATGAGACCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: DFYMGNGCQPKRNKGLGVGSSPN*FDETIP Trigger: AGGAATGGTCTCATCAAAGCAGTTTGGACTACTTCC...CACCCCCAATCCCTTGTTTCTCTTTGGTTGACATCCATTCCCCATATAGAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATTGATCAAGGTTAGACATGGGTATAACCTAGAAAAGATTGAATGGTCAAGAGTGGGACAGCTGTaGCCTAGGGAAGGTAGCACT | + |
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Preference number: 2 (lower is better) Translates to: AELIKVRHGYNLEKIEWSRVGQL*PREGST Trigger: AGTGCTACCTTCCCTAGGCCACAGCTGTCCCACTCT...TGACCATTCAATCTTTTCTAGGTTATACCCATGTCTAACCTTGATCAATTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCATTATTCTTGGTGTCCTCAGGGCTAACTCAGAGCTAGTTCAGTTTGCTATCTTTTGCCTAAAATaGGCTTCAGCAGAATTGATC | + |
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Preference number: 2 (lower is better) Translates to: GVIILGVLRANSELVQFAIFCLK*ASAELI Trigger: GATCAATTCTGCTGAAGCTCATTTTAGGCAAAAGAT...AGCAAACTGAACTAGCTCTGAGTTAGCCCTGAGGACACCAAGAATAATGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR TCA 72 bp | GGTGTGGTGAGGGGAGGCCTGTGGCAACTGGATGTGTaGGGCCTGAGGCAGGTCGTTGGCTGTGCTCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GVVRGGLWQLDV*GLRQVVGCAPS Trigger: AGAGGGAGCACAGCCAACGACCTGCCTCAGGCCTCACACATCCAGTTGCCACAGGCCTCCCCTCACCACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR GCA 72 bp | CATTATGTTGCCCAGCTGGGCATCAACCCCCTCCTGTaGTCAGCGCTGACCAGGGTACTGAAGCAGGTACTG | + |
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Preference number: 3 (lower is better) Translates to: HYVAQLGINPLL*SALTRVLKQVL Trigger: CAGTACCTGCTTCAGTACCCTGGTCAGCGCTGAGCACAGGAGGGGGTTGATGCCCAGCTGGGCAACATAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 72 bp | TGTGGCCTAGGGAAGGTAGCACTCTTCAAGAGCAGGTaGCCAATGGGTCCCTCTTTCTCGGGAGAACACGGT | + |
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Preference number: 3 (lower is better) Translates to: CGLGKVALFKSR*PMGPSFSGEHG Trigger: ACCGTGTTCTCCCGAGAAAGAGGGACCCATTGGCCACCTGCTCTTGAAGAGTGCTACCTTCCCTAGGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 72 bp | GAAACCCTGATAGGCTATCCTCCAGCTCTGGCTCCTTaGGAGGCAATTAATCACCTGAGCCCTGCCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: ETLIGYPPALAP*EAINHLSPASS Trigger: GGAAGAGGCAGGGCTCAGGTGATTAATTGCCTCCCAAGGAGCCAGAGCTGGAGGATAGCCTATCAGGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR CCA 72 bp | TCACCCCTCACTGAGGTATCCCTAGTCTTCCCACAATaGACCTTGGGCAGGGGTGACCCTAACAGATACCAG | + |
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Preference number: 3 (lower is better) Translates to: SPLTEVSLVFPQ*TLGRGDPNRYQ Trigger: CTGGTATCTGTTAGGGTCACCCCTGCCCAAGGTCCATTGTGGGAAGACTAGGGATACCTCAGTGAGGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR TCA 72 bp | TTAACACAGACATCAAGGGCTTCCCTCACCCCTCACTaGGGTATCCCTAGTCTTCCCACAATGGACCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: LTQTSRASLTPH*GIPSLPTMDLG Trigger: CCCAAGGTCCATTGTGGGAAGACTAGGGATACCTCAGTGAGGGGTGAGGGAAGCCCTTGATGTCTGTGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGTGCTCCCTCTGAGATGTGAGGCATATAGAACCACACGTTTTAACACAGACTTCCCACAATGGACCTaGGGCAGGGGTGACCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: AVLPLRCEAYRTTRFNTDFPQWT*GRGDPN Trigger: GTTAGGGTCACCCCTGCCCAAGGTCCATTGTGGGAA...GTCTGTGTTAAAACGTGTGGTTCTATATGCCTCACATCTCAGAGGGAGCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCTAGTCTTCCCACAATGGACCTTGGGCAGGGGTGACCCTAACAGATACCAGTGGTTGGTTTTCTCTTaGAGCTCTTTGAGAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SLVFPQWTLGRGDPNRYQWLVFS*SSLRVG Trigger: TCCCACTCTCAAAGAGCTCAAAGAGAAAACCAACCA...CTGGTATCTGTTAGGGTCACCCCTGCCCAAGGTCCATTGTGGGAAGACTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR TCA 72 bp | ATGGGTCCCTCTTTCTCGGGAGAACACGGTGGGAGATaGTCTCATGGGGTTTTCTATCTACAAACCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: MGPSFSGEHGGR*SHGVFYLQTRT Trigger: GGTCCTGGTTTGTAGATAGAAAACCCCATGAGATCATCTCCCACCGTGTTCTCCCGAGAAAGAGGGACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| 3UTR TCA 72 bp | AGATGTGGTATGGCTTGGCTCCTCTTGGGTTGGGAATaGTATGGGCAGGACAGAAGTAGAGGTTGGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RCGMAWLLLGWE*YGQDRSRGWKG Trigger: CCCTTTCCAACCTCTACTTCTGTCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | GTGGCCAATGGGTCCCTCTTTCTCGGGAGAACACGGTaGGAGATGATCTCATGGGGTTTTCTATCTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VANGSLFLGRTR*EMISWGFLSTN Trigger: GTTTGTAGATAGAAAACCCCATGAGATCATCTCCCACCGTGTTCTCCCGAGAAAGAGGGACCCATTGGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | GTTTTCTCTTTGAGCTCTTTGAGAGTGGGACAGCTGTaGCCTAGGGAAGGTAGCACTCTTCAAGAGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VFSLSSLRVGQL*PREGSTLQEQV Trigger: CACCTGCTCTTGAAGAGTGCTACCTTCCCTAGGCCACAGCTGTCCCACTCTCAAAGAGCTCAAAGAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAGAGCTAGTTCAGTTTGCTTTCTGTGCTGAGGATGGGACTCAGGTCCCTAAGAGAAACAAGGGATaGGGGGTGCCCTGTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSELVQFAFCAEDGTQVPKRNKG*GVPCSS Trigger: TGAAGAACAGGGCACCCCCAATCCCTTGTTTCTCTT...AGGGACCTGAGTCCCATCCTCAGCACAGAAAGCAAACTGAACTAGCTCTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGAATTTACTATGTACACCAGGCTGGCCTCAAACTTACAGAGATCCCCCTTTGGCTCCTCTTGGGTaGGGAATGATATGGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SWNLLCTPGWPQTYRDPPLAPLG*GMIWAG Trigger: TCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAA...AGGGGGATCTCTGTAAGTTTGAGGCCAGCCTGGTGTACATAGTAAATTCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | AGTTTATCTCTCACGACACTCAAACTACCTCAGAGATaGGGAAGGACAACAAGGATCTCCCTCTGGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLTTLKLPQR*GRTTRISLWVA Trigger: TGCCACCCAGAGGGAGATCCTTGTTGTCCTTCCCCATCTCTGAGGTAGTTTGAGTGTCGTGAGAGATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCACAAAGAGCTGCTGTGTAGGCCAAAGGGAAGGCACATCCATCCATCCTCAATTAATCCACCCTTaGTGGATTTGGAAGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SSTKSCCVGQREGTSIHPQLIHP*WIWKPQ Trigger: CTGTGGCTTCCAAATCCACAAAGGGTGGATTAATTG...AGGATGGATGGATGTGCCTTCCCTTTGGCCTACACAGCAGCTCTTTGTGCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | ATTCTATCCTCAGATGTGGTATGGCTTGGCTCCTCTTaGGTTGGGAATGATATGGGCAGGACAGAAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ILSSDVVWLGSS*VGNDMGRTEVE Trigger: CTCTACTTCTGTCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTGAGGATAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAATTGATCAAGGTTAGACATGGGTATAACCTAGAAAAGATTGAATGGTCACAGGACCCTCCTGCCTaGTCTCCAGGGTCCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AELIKVRHGYNLEKIEWSQDPPA*SPGSKE Trigger: TTCTTTGGACCCTGGAGACAAGGCAGGAGGGTCCTG...TGACCATTCAATCTTTTCTAGGTTATACCCATGTCTAACCTTGATCAATTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | GTGAGATCTGGGGCAGGTCTACAGTTGACTTCTATATaGGGAATGGATGTCAACCAAAGAGAAACAAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VRSGAGLQLTSI*GMDVNQRETRD Trigger: ATCCCTTGTTTCTCTTTGGTTGACATCCATTCCCCATATAGAAGTCAACTGTAGACCTGCCCCAGATCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGAATTTACTATGTACACCAGGCTGGCCTCAAACTTACAGAGATCCCCCTAGAAGGAAAAACTGGTaGGTTTTCTCTTTGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SWNLLCTPGWPQTYRDPPRRKNW*VFSLSS Trigger: AGAGCTCAAAGAGAAAACCAACCAGTTTTTCCTTCT...AGGGGGATCTCTGTAAGTTTGAGGCCAGCCTGGTGTACATAGTAAATTCCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR TCA 72 bp | GTGTTGGAACTAAAAGTAAGCATCGTGTCCAGTTTCTaGCTCTGGAAGTCTGAGTCTCATTATGTTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLELKVSIVSSF*LWKSESHYVAQ Trigger: CTGGGCAACATAATGAGACTCAGACTTCCAGAGTCAGAAACTGGACACGATGCTTACTTTTAGTTCCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR GCA 72 bp | CTCATGTCCCCAGAAATGCCTCTGCATTCTTCCACATaGTCTCCCCAATATTTAAATCCTTTCAGTAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LMSPEMPLHSST*SPQYLNPFSSP Trigger: AGGACTACTGAAAGGATTTAAATATTGGGGAGAGCATGTGGAAGAATGCAGAGGCATTTCTGGGGACATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | AACATATGTGTGCGTACCAAGAGAAGGAAAAACTGGTTGGTTTTCTCTTTGAGCCCACCCTTTGTGGATTaGGAAGCCACAGTGTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: NICVRTKRRKNWLVFSLSPPFVD*EATVYV Trigger: TACATACACTGTGGCTTCCAAATCCACAAAGGGTGG...GCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | CCAAACATATGTGTGCGTACCAAGAGAAGGAAAAACTaGTTGGTTTTCTCTTTGAGCTCTTTGAGAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PNICVRTKRRKN*LVFSLSSLRVG Trigger: TCCCACTCTCAAAGAGCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAATTGATCAAGGTTAGACATGGGTATAACCTAGAAAAGATTGAATGGTCAGGGGCAGGTCTACAGTaGACTTCTATATGGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: AELIKVRHGYNLEKIEWSGAGLQ*TSIWGM Trigger: CATTCCCCATATAGAAGTCAACTGTAGACCTGCCCC...TGACCATTCAATCTTTTCTAGGTTATACCCATGTCTAACCTTGATCAATTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR GCA 72 bp | AGATTGAATGGTCACAACCTTGGCCAAACATATGTGTaGGTACCAAGAGAAGGAAAAACTGGTTGGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLNGHNLGQTYV*VPREGKTGWFS Trigger: AGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTTTGGCCAAGGTTGTGACCATTCAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | GGGTATAACCTAGAAAAGATTGAATGGTCACAACCTTaGCCAAACATATGTGTGCGTACCAAGAGAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GYNLEKIEWSQP*PNICVRTKRRK Trigger: TTTCCTTCTCTTGGTACGCACACATATGTTTGGCCAAGGTTGTGACCATTCAATCTTTTCTAGGTTATACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | AAGGTTAGACATGGGTATAACCTAGAAAAGATTGAATaGTCACAACCTTGGCCAAACATATGTGTGCGTACC | + |
|
Preference number: 3 (lower is better) Translates to: KVRHGYNLEKIE*SQPWPNICVRT Trigger: GGTACGCACACATATGTTTGGCCAAGGTTGTGACCATTCAATCTTTTCTAGGTTATACCCATGTCTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CCA 72 bp | AACTATCTTAAAAGGATCCAATTCTATCCTCAGATGTaGTATGGCTTGGCTCCTCTTGGGTTGGGAATGATA | + |
|
Preference number: 3 (lower is better) Translates to: NYLKRIQFYPQM*YGLAPLGLGMI Trigger: TATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTGAGGATAGAATTGGATCCTTTTAAGATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR TCA 72 bp | AAGTCAATTAACAGGTCTTTCATCTTTTGCCTAAAATaGGCTTCAGCAGAATTGATCAAGGTTAGACATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KSINRSFIFCLK*ASAELIKVRHG Trigger: CCCATGTCTAACCTTGATCAATTCTGCTGAAGCTCATTTTAGGCAAAAGATGAAAGACCTGTTAATTGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | GACAGACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGCGGTACAGACGGCCCTaGCGCAGGCCTCCTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRLGTQEGKGPSEGCGEGRYRRP*RRPPRL Trigger: CAGCCTAGGAGGCCTGCGCCAGGGCCGTCTGTACCG...CCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR TCA 90 bp | GACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGAGGCCCCAGTCTCCAGCAGTaGGCAATAGACCCGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DWELRRVRDLLKGVVRGGPSLQQ*AIDPAA Trigger: AGCCGCCGGGTCTATTGCTCACTGCTGGAGACTGGG...GCCTCCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR TCA 90 bp | CAGGACCCTCCTGCCTTGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGATGCCACCTTCACAGGCAGTTaGTTGGTGCCCACACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDPPALSPGSKEDRDKDATFTGS*LVPTPP Trigger: CGGGGGTGTGGGCACCAATCAACTGCCTGTGAAGGT...GGCATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGGGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAAGCTGTTGGCCTGGTGTGTGAGCCCCCAGCTTCCTTCCTACACAACTCCAGCACATAGATCTTaGAGCCCCGGAGGAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKLLAWCVSPQLPSYTTPAHRS*SPGGRR Trigger: CCTCCTTCCTCCGGGGCTCCAAGATCTATGTGCTGG...AGTTGTGTAGGAAGGAAGCTGGGGGCTCACACACCAGGCCAACAGCTTTGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR TCA 90 bp | AGTAGCACAAAGAGCTGCTGTGTAGGCCAAAGGGAAGGCACATCCATCCATCCTGGCCCCCAGCCACTATaGCCCTTCCACTCAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTKSCCVGQREGTSIHPGPQPL*PFHSDH Trigger: GTGGTCTGAGTGGAAGGGTCATAGTGGCTGGGGGCC...AGGATGGATGGATGTGCCTTCCCTTTGGCCTACACAGCAGCTCTTTGTGCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | CAGATGTGGTATGGCTTGGCTCCTCTTGGGTTGGGAATGATATGGGCAGGACAGTTGTCCGGAGGAACTTaGGCTGCCGGTACAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: QMWYGLAPLGLGMIWAGQLSGGT*AAGTDG Trigger: GCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAA...CTGTCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAAGCTGTTGGCCTGGTGTGTGAGCCCCCAGCTTCCTTCCTACACAACTCCAGGGTCACAAAGCTaGAGAAAGCCCGTTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKLLAWCVSPQLPSYTTPGSQS*RKPVYR Trigger: CCTGTAAACGGGCTTTCTCCAGCTTTGTGACCCTGG...AGTTGTGTAGGAAGGAAGCTGGGGGCTCACACACCAGGCCAACAGCTTTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGTCTTCCCACAATGGACCTTGGGCAGGGGTGACCCTAACAGATACCAGACCAGCCACAAAGTCTaGCCGGCGTTTCTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLVFPQWTLGRGDPNRYQTSHKV*PAFLEE Trigger: TTCCTCAAGAAACGCCGGGCAGACTTTGTGGCTGGT...CTGGTATCTGTTAGGGTCACCCCTGCCCAAGGTCCATTGTGGGAAGACTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCAAAGCTGTTGGCCTGGTGTGTGAGCCCCCAGCTTCCTTCCTACACAACTGATAATCTTTGGCTGTaGCAGAAATGCCCATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKLLAWCVSPQLPSYTTDNLWL*QKCPWQ Trigger: CTGCCATGGGCATTTCTGTCACAGCCAAAGATTATC...AGTTGTGTAGGAAGGAAGCTGGGGGCTCACACACCAGGCCAACAGCTTTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR GCA 90 bp | AGTAGCACAAAGAGCTGCTGTGTAGGCCAAAGGGAAGGCACATCCATCCATCCTAGGGTGGAATGCTTCTaGTGTCTCCAGGACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKSCCVGQREGTSIHPRVECF*CLQDSG Trigger: CCCACTGTCCTGGAGACAGCAGAAGCATTCCACCCT...AGGATGGATGGATGTGCCTTCCCTTTGGCCTACACAGCAGCTCTTTGTGCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | GGATTGGGGGTGCCCTGTTCTTCATTAGTTTATCTCTCACGACACTCAAACTACTCCAGGACAGTGGGCTaGTTTCCAAGGCCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVPCSSLVYLSRHSNYSRTVG*FPRPPA Trigger: GGCTGGGGGCCTTGGAAACCAGCCCACTGTCCTGGA...GTAGTTTGAGTGTCGTGAGAGATAAACTAATGAAGAACAGGGCACCCCCAATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR GCA 90 bp | GACAGACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGTTCTCTTCTTCCACTTaGCCTCATCGATGTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DRLGTQEGKGPSEGCGEGFSSST*PHRCCT Trigger: TGTACAACATCGATGAGGGCAAGTGGAAGAAGAGAA...CCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | GGTATTGGATCCATAAGCAATGGAGGTTTCTTTTGTGGTCTGTTCATTAGAGGCCCGGCGGCTAGGCAGTaGAGCAAGGCGCTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GIGSISNGGFFCGLFIRGPAARQ*SKALPL Trigger: CAGTGGAAGCGCCTTGCTCCACTGCCTAGCCGCCGG...GCCTCTAATGAACAGACCACAAAAGAAACCTCCATTGCTTATGGATCCAATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAGTCTCATTATGTTGCCCAGCTGGGCATCAACCCCCTCCTGTGCTCAGCCTAGGCTGTATAAGTaGTTGTCCAGGGTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIMLPSWASTPSCAQPRLYK*LSRVTK Trigger: CTTTGTGACCCTGGACAACCACTTATACAGCCTAGG...CTGAGCACAGGAGGGGGTTGATGCCCAGCTGGGCAACATAATGAGACTCAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGTGAGCCCCCAGCTTCCTTCCTACACAACTGCCCTAGCTTCAAGTGCATTTCTTGAGGAAGAATaGGCGTTCCATCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WCVSPQLPSYTTALASSAFLEEE*AFHLQP Trigger: TGGCTGAAGATGGAACGCTCATTCTTCCTCAAGAAA...TGCACTTGAAGCTAGGGCAGTTGTGTAGGAAGGAAGCTGGGGGCTCACACACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR TCA 90 bp | TTAACCGGAGTGCAATTAATCCACCCTTTGTGGATTTGGAAGCCACAGTGTATGGCAAGGCGCTTCCACTaGAAGTCCTTGACATTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVQLIHPLWIWKPQCMARRFH*KSLTLG Trigger: GCCCAATGTCAAGGACTTTCAGTGGAAGCGCCTTGC...CATACACTGTGGCTTCCAAATCCACAAAGGGTGGATTAATTGCACTCCGGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR GCA 90 bp | GGATTGGGGGTGCCCTGTTCTTCATTAGTTTATCTCTCACGACACTCAAACTACCTTCTCAGGGTGGAATaGTTCTGCTGTCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVPCSSLVYLSRHSNYLLRVE*FCCLQD Trigger: GTCCTGGAGACAGCAGAAGCATTCCACCCTGAGAAG...GTAGTTTGAGTGTCGTGAGAGATAAACTAATGAAGAACAGGGCACCCCCAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CAA 72 bp | TGGGGTTTTCTATCTACAAACCAGGACCCTCCTGCCTaGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGFLSTNQDPPA*SPGSKEDRDKD Trigger: ATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGGGTCCTGGTTTGTAGATAGAAAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CAA 72 bp | CGTACCAAGAGAAGGAAAAACTGGTTGGTTTTCTCTTaGAGCTCTTTGAGAGTGGGACAGCTGTGGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTKRRKNWLVFS*SSLRVGQLWPR Trigger: CCTAGGCCACAGCTGTCCCACTCTCAAAGAGCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR GCA 90 bp | CCAAAGAAGACAGGGATAAAGATGCCAATTGTTGTGCTGCTGTTATTAACCGGACAGGCCCATCCCTCCTaGGGCATACACTCGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: PKKTGIKMPIVVLLLLTGQAHPS*GIHSII Trigger: GATTATCGAGTGTATGCCGCAGGAGGGATGGGCCTG...TCCGGTTAATAACAGCAGCACAACAATTGGCATCTTTATCCCTGTCTTCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CAA 72 bp | AAAAGGATCCAATTCTATCCTCAGATGTGGTATGGCTaGGCTCCTCTTGGGTTGGGAATGATATGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRIQFYPQMWYG*APLGLGMIWAG Trigger: TCCTGCCCATATCATTCCCAACCCAAGAGGAGCCAAGCCATACCACATCTGAGGATAGAATTGGATCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | GCAGAATTGATCAAGGTTAGACATGGGTATAACCTAGAAAAGATTGAATGGTCAATCTTGGGGTGGGCATaGGAGCTAGTGACACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AELIKVRHGYNLEKIEWSILGWA*ELVTPT Trigger: TGTGGGTGTCACTAGCTCCCATGCCCACCCCAAGAT...TGACCATTCAATCTTTTCTAGGTTATACCCATGTCTAACCTTGATCAATTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CAA 72 bp | ATGGGGAATGGATGTCAACCAAAGAGAAACAAGGGATaGGGGGTGCCCTGTTCTTCATTAGTTTATCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGNGCQPKRNKG*GVPCSSLVYLS Trigger: TGAGAGATAAACTAATGAAGAACAGGGCACCCCCAATCCCTTGTTTCTCTTTGGTTGACATCCATTCCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS-3UTR CCA 90 bp | AACATATGTGTGCGTACCAAGAGAAGGAAAAACTGGTTGGTTTTCTCTTTGAGCTTGTTCTTCTCAGGGTaGAATGCTTCTGCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NICVRTKRRKNWLVFSLSLFFSG*NASAVS Trigger: GGAGACAGCAGAAGCATTCCACCCTGAGAAGAACAA...GCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| 3UTR CAA 72 bp | AACATATGTGTGCGTACCAAGAGAAGGAAAAACTGGTaGGTTTTCTCTTTGAGCTCTTTGAGAGTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NICVRTKRRKNW*VFSLSSLRVGQ Trigger: CTGTCCCACTCTCAAAGAGCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS TCA 90 bp | CTGTCTCCAGGACAGTGGGCTGGTTTCCAAGGCCCCCAGCCACTATaGCCCTTCCACTCAGACCACCAGCCACAAAGTCTGCCCGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSPGQWAGFQGPQPL*PFHSDHQPQSLPGV Trigger: AACGCCGGGCAGACTTTGTGGCTGGTGGTCTGAGTGGAAGGGTCATAGTGGCTGGGGGCCTTGGAAACCAGCCCACTGTCCTGGAGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS GCA 90 bp | CCCTGTTCCATGTCGAACACATCCATTGTCCGGAGGAACTTGGGCTaGCGGTACAGACGGCCCTGGCGCAGGCCTCCTAGGCTGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCSMSNTSIVRRNLG*RYRRPWRRPPRLYK Trigger: CTTATACAGCCTAGGAGGCCTGCGCCAGGGCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAATGGATGTGTTCGACATGGAACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
||
| CDS CCA 90 bp | ACATCCATTGTCCGGAGGAACTTGGGCTGCCGGTACAGACGGCCCTaGCGCAGGCCTCCTAGGCTGTATAAGTGGTTGTCCAGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSIVRRNLGCRYRRP*RRPPRLYKWLSRVT Trigger: TGTGACCCTGGACAACCACTTATACAGCCTAGGAGGCCTGCGCCAGGGCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAATGGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | TCTTCAAGAGCAGGTGGCCAATGGGTCCCTCTTTCTCGGGAGAACACGGTGGGAGACCTTCACAGGCAGTaGATTGGTGCCCACACCCCC | + |
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Preference number: 5 (lower is better) Translates to: SSRAGGQWVPLSRENTVGDLHRQ*IGAHTP Trigger: GGGGGTGTGGGCACCAATCAACTGCCTGTGAAGGTC...TCCCACCGTGTTCTCCCGAGAAAGAGGGACCCATTGGCCACCTGCTCTTGAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 90 bp | AGATCTTGGAGCCCCGGAGGAAGGAGGTGGCAGCGTATCTTGGGGTaGGCATGGGAGCTAGTGACACCCACATGTCCTTCAGCATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: RSWSPGGRRWQRILG*AWELVTPTCPSACH Trigger: ATGACATGCTGAAGGACATGTGGGTGTCACTAGCTCCCATGCCCACCCCAAGATACGCTGCCACCTCCTTCCTCCGGGGCTCCAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | GACTGGGAACTCAGGAGGGTAAGGGACCTTCTGAAGGGTGTGGTGAGGGGAGGCTGTCGAACACATCCATaGTCCGGAGGAACTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: DWELRRVRDLLKGVVRGGCRTHP*SGGTWA Trigger: AGCCCAAGTTCCTCCGGACAATGGATGTGTTCGACA...GCCTCCCCTCACCACACCCTTCAGAAGGTCCCTTACCCTCCTGAGTTCCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 90 bp | GCAGGCCTCCTAGGCTGTATAAGTGGTTGTCCAGGGTCACAAAGCTaGAGAAAGCCCGTTTACAGGGAATGTTGGGGAACTTGGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGLLGCISGCPGSQS*RKPVYRECWGTWSR Trigger: CCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAGCTTTGTGACCCTGGACAACCACTTATACAGCCTAGGAGGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | ACGGTGGGAGATGATCTCATGGGGTTTTCTATCTACAAACCAGGACCCTCCTGCTCCATAGGGACGCCATaGTCATCACATCCCCCGATG | + |
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Preference number: 5 (lower is better) Translates to: TVGDDLMGFSIYKPGPSCSIGTP*SSHPPM Trigger: CATCGGGGGATGTGATGACAATGGCGTCCCTATGGA...GCAGGAGGGTCCTGGTTTGTAGATAGAAAACCCCATGAGATCATCTCCCACCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | GCTGTGCTCCCTCTGAGATGTGAGGCATATAGAACCACACGTTTTAACACAGACATTGTCCGGAGGAACTaGGGCTGCCGGTACAGACGG | + |
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Preference number: 5 (lower is better) Translates to: AVLPLRCEAYRTTRFNTDIVRRN*GCRYRR Trigger: CCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAAT...GTCTGTGTTAAAACGTGTGGTTCTATATGCCTCACATCTCAGAGGGAGCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS TCA 90 bp | TTGCCCTCATCGATGTTGTACATTTCCACGACCTTCACAGGCAGTTaGTTGGTGCCCACACCCCCGATCACCATAATCCGCTTTCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: LPSSMLYISTTFTGS*LVPTPPITIIRFPR Trigger: CCTAGGAAAGCGGATTATGGTGATCGGGGGTGTGGGCACCAATCAACTGCCTGTGAAGGTCGTGGAAATGTACAACATCGATGAGGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | CCAGTTTCTGACTCTGGAAGTCTGAGTCTCATTATGTTGCCCAGCTGGGCATCAGGGAGTGCCTCCCACTaGTTCTTCTCAGGGTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: PVSDSGSLSLIMLPSWASGSASH*FFSGWN Trigger: ATTCCACCCTGAGAAGAACAAGTGGGAGGCACTCCC...TGATGCCCAGCTGGGCAACATAATGAGACTCAGACTTCCAGAGTCAGAAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 90 bp | TGTCCAGGGTCACAAAGCTGGAGAAAGCCCGTTTACAGGGAATGTTaGGGAACTTGGTCCAGGACCGAGACTCTATATCAAAGACCTCGA | + |
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Preference number: 5 (lower is better) Translates to: CPGSQSWRKPVYREC*GTWSRTETLYQRPR Trigger: TCGAGGTCTTTGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAGCTTTGTGACCCTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | ACGGTGGGAGATGATCTCATGGGGTTTTCTATCTACAAACCAGGACCCTCCTGCTTGCCCTCATCGATGTaGTACATTTCCACGACCTTC | + |
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Preference number: 5 (lower is better) Translates to: TVGDDLMGFSIYKPGPSCLPSSM*YISTTF Trigger: GAAGGTCGTGGAAATGTACAACATCGATGAGGGCAA...GCAGGAGGGTCCTGGTTTGTAGATAGAAAACCCCATGAGATCATCTCCCACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCCTTGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGATGCCAATTGTAGGCTGTATAAGTGGTaGTCCAGGGTCACAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPALSPGSKEDRDKDANCRLYKW*SRVTKL Trigger: CAGCTTTGTGACCCTGGACAACCACTTATACAGCCT...ACAATTGGCATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCCTTGTCTCCAGGGTCCAAAGAAGACAGGGATAAAGATGCCAATTGTCAGCATGTCATAGTGTaGCAAGTAGTTGTGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: PPALSPGSKEDRDKDANCQHVIV*QVVVWT Trigger: CGTCCACACAACTACTTGCAACACTATGACATGCTG...ACAATTGGCATCTTTATCCCTGTCTTCTTTGGACCCTGGAGACAAGGCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | GCTGTGCTCCCTCTGAGATGTGAGGCATATAGAACCACACGTTTTAACACAGACAAGACCTCGAAGGCATaGACTGCATACTTAGATTGT | + |
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Preference number: 5 (lower is better) Translates to: AVLPLRCEAYRTTRFNTDKTSKA*TAYLDC Trigger: ACAATCTAAGTATGCAGTCAATGCCTTCGAGGTCTT...GTCTGTGTTAAAACGTGTGGTTCTATATGCCTCACATCTCAGAGGGAGCACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS-3UTR CAA 90 bp | AACATATGTGTGCGTACCAAGAGAAGGAAAAACTGGTTGGTTTTCTCTTTGAGCCTTCTCTTCTTCCACTaGCCCTCATCGATGTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: NICVRTKRRKNWLVFSLSLLFFH*PSSMLY Trigger: GTACAACATCGATGAGGGCAAGTGGAAGAAGAGAAG...GCTCAAAGAGAAAACCAACCAGTTTTTCCTTCTCTTGGTACGCACACATATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 72 bp | GTCCGGAGGAACTTGGGCTGCCGGTACAGACGGCCCTaGCGCAGGCCTCCTAGGCTGTATAAGTGGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VRRNLGCRYRRP*RRPPRLYKWLS Trigger: GGACAACCACTTATACAGCCTAGGAGGCCTGCGCCAGGGCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS GCA 72 bp | ATGTCGAACACATCCATTGTCCGGAGGAACTTGGGCTaGCGGTACAGACGGCCCTGGCGCAGGCCTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: MSNTSIVRRNLG*RYRRPWRRPPR Trigger: CCTAGGAGGCCTGCGCCAGGGCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAATGGATGTGTTCGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 72 bp | GTTCCATGTCGAACACATCCATTGTCCGGAGGAACTTaGGCTGCCGGTACAGACGGCCCTGGCGCAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VPCRTHPLSGGT*AAGTDGPGAGL Trigger: GAGGCCTGCGCCAGGGCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAATGGATGTGTTCGACATGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 72 bp | TGTTCCATGTCGAACACATCCATTGTCCGGAGGAACTaGGGCTGCCGGTACAGACGGCCCTGGCGCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSMSNTSIVRRN*GCRYRRPWRRP Trigger: AGGCCTGCGCCAGGGCCGTCTGTACCGGCAGCCCAAGTTCCTCCGGACAATGGATGTGTTCGACATGGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS TCA 72 bp | GGACAGTGGGCTGGTTTCCAAGGCCCCCAGCCACTATaGCCCTTCCACTCAGACCACCAGCCACAAAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GQWAGFQGPQPL*PFHSDHQPQSL Trigger: CAGACTTTGTGGCTGGTGGTCTGAGTGGAAGGGTCATAGTGGCTGGGGGCCTTGGAAACCAGCCCACTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS GCA 72 bp | GGGGAGTGCCTCCCACTTGTTCTTCTCAGGGTGGAATaGTTCTGCTGTCTCCAGGACAGTGGGCTGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GECLPLVLLRVE*FCCLQDSGLVS Trigger: GGAAACCAGCCCACTGTCCTGGAGACAGCAGAAGCATTCCACCCTGAGAAGAACAAGTGGGAGGCACTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 72 bp | GGAGGAAGGAGGTGGCAGCGTATCTTGGGGTGGGCATaGGAGCTAGTGACACCCACATGTCCTTCAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: GGRRWQRILGWA*ELVTPTCPSAC Trigger: ACATGCTGAAGGACATGTGGGTGTCACTAGCTCCCATGCCCACCCCAAGATACGCTGCCACCTCCTTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS TCA 72 bp | TCCCTCCTGCGGCATACACTCGATAATCTTTGGCTGTaGCAGAAATGCCCATGGCAGCCTCGCGCAAGACGC | + |
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Preference number: 6 (lower is better) Translates to: SLLRHTLDNLWL*QKCPWQPRARR Trigger: GCGTCTTGCGCGAGGCTGCCATGGGCATTTCTGTCACAGCCAAAGATTATCGAGTGTATGCCGCAGGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS GCA 72 bp | TGCCTCCCACTTGTTCTTCTCAGGGTGGAATGCTTCTaGTGTCTCCAGGACAGTGGGCTGGTTTCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: CLPLVLLRVECF*CLQDSGLVSKA Trigger: GGCCTTGGAAACCAGCCCACTGTCCTGGAGACAGCAGAAGCATTCCACCCTGAGAAGAACAAGTGGGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS TCA 72 bp | TCAGACCACCAGCCACAAAGTCTGCCCGGCGTTTCTTaGGGAAGAATGAGCGTTCCATCTTCAGCCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: SDHQPQSLPGVS*GRMSVPSSAIP Trigger: GGGGATGGCTGAAGATGGAACGCTCATTCTTCCTCAAGAAACGCCGGGCAGACTTTGTGGCTGGTGGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 72 bp | CTCAGACCACCAGCCACAAAGTCTGCCCGGCGTTTCTaGAGGAAGAATGAGCGTTCCATCTTCAGCCATCCC | + |
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Preference number: 6 (lower is better) Translates to: LRPPATKSARRF*RKNERSIFSHP Trigger: GGGATGGCTGAAGATGGAACGCTCATTCTTCCTCAAGAAACGCCGGGCAGACTTTGTGGCTGGTGGTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 90 bp | GAAATGCCCATGGCAGCCTCGCGCAAGACGCTTCTCTTCTTCCACTaGCCCTCATCGATGTTGTACATTTCCACGACCTTCACAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: EMPMAASRKTLLFFH*PSSMLYISTTFTGS Trigger: ACTGCCTGTGAAGGTCGTGGAAATGTACAACATCGATGAGGGCAAGTGGAAGAAGAGAAGCGTCTTGCGCGAGGCTGCCATGGGCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS TCA 72 bp | TCGATGTTGTACATTTCCACGACCTTCACAGGCAGTTaGTTGGTGCCCACACCCCCGATCACCATAATCCGC | + |
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Preference number: 6 (lower is better) Translates to: SMLYISTTFTGS*LVPTPPITIIR Trigger: GCGGATTATGGTGATCGGGGGTGTGGGCACCAATCAACTGCCTGTGAAGGTCGTGGAAATGTACAACATCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 90 bp | TTGTCCAGGGTCACAAAGCTGGAGAAAGCCCGTTTACAGGGAATGTaGGGGAACTTGGTCCAGGACCGAGACTCTATATCAAAGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: LSRVTKLEKARLQGM*GNLVQDRDSISKTS Trigger: CGAGGTCTTTGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAGCTTTGTGACCCTGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 72 bp | CTGGAGAAAGCCCGTTTACAGGGAATGTTGGGGAACTaGGTCCAGGACCGAGACTCTATATCAAAGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: LEKARLQGMLGN*VQDRDSISKTS Trigger: CGAGGTCTTTGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 90 bp | GTCACAAAGCTGGAGAAAGCCCGTTTACAGGGAATGTTGGGGAACTaGGTCCAGGACCGAGACTCTATATCAAAGACCTCGAAGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: VTKLEKARLQGMLGN*VQDRDSISKTSKAL Trigger: CAATGCCTTCGAGGTCTTTGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAGCTTTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 72 bp | TGGAGAAAGCCCGTTTACAGGGAATGTTGGGGAACTTaGTCCAGGACCGAGACTCTATATCAAAGACCTCGA | + |
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Preference number: 6 (lower is better) Translates to: WRKPVYRECWGT*SRTETLYQRPR Trigger: TCGAGGTCTTTGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CAA 72 bp | GTCACAAAGCTGGAGAAAGCCCGTTTACAGGGAATGTaGGGGAACTTGGTCCAGGACCGAGACTCTATATCA | + |
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Preference number: 6 (lower is better) Translates to: VTKLEKARLQGM*GNLVQDRDSIS Trigger: TGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAGCTTTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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| CDS CCA 72 bp | TCACAAAGCTGGAGAAAGCCCGTTTACAGGGAATGTTaGGGAACTTGGTCCAGGACCGAGACTCTATATCAA | + |
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Preference number: 6 (lower is better) Translates to: SQSWRKPVYREC*GTWSRTETLYQ Trigger: TTGATATAGAGTCTCGGTCCTGGACCAAGTTCCCCAACATTCCCTGTAAACGGGCTTTCTCCAGCTTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046071.5 |
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